Spg029698 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGCCAGTCTGGTAGTCAAAAGAGGGCGGCCCAAGAGGATAATGAGACGCGAGCCCAAACCCGACCCAATCAAAAGAGAAGAACCAGCTTGAAGCCCAGAGCCAAAGGAAAAAAGGGGGTTTCGTTTAATGACAAAGCCCAAGTGACTTTTTTTAAGAAAGGAAACATCCAATCTTCAGAAAATCCTAACAGCCCACAACAGGAAAGAGACACGTTCATCAAAGGGGAGGGTTTTGAGTCTGAATACTCTATATCTAGCCCAGGTAGCAAAAGCCCAGTGAGTAAAGGGCAAGTTGAACCAACCGAAGAGGGTGATATCGAGCATGGAACGAATTATGGGGATATAGCCCACATGGCCTCCAGCTTTTATTCTTGAGCGATGAAGAGGAAGATAGAAATACTCAGATCGAAAGCTCCACAAAAACAGAGCAACAAGAACGATATGACAGAAAAGGTAAAAGGAAAATTGAAGAATTTTGTCAAATGACTCCCGACCATGCAACAGAGGTATGTGATTTTATAGAAGAAGAATACCAAGATACCCAGACTATTAGTGTTGAAGACTGCCCGAAGGCTTTGGCTATAGTCCCTCCGAAGAAGCCACAGGAAACATGTAGAAACAATGGCTCCATAAGGATTCGTGATTAGCAAAGAGATTATTCTGACACTAAAGAAGAATAACATTTAATAACCAGTGCGAACACAAGAAAAGGCAACACAGCTCAGAAGAAACGGATTAGAGAAATGACCAGCCTGCTGAGAACGTGGGAAAAGGAGGTGCCAGAAAGCCCAGGAAGAGAAGTAGAGGCCTCGGAGGAAGATTGTGAAAATGGACAAGTTAGTTTAGGAAGGGGACAAGAGGTTGCTTTATGAAGATCATCTCTTGGAACGTTAGAGGGCTGGGTTTGAGGTCGAAAAGAGCCCTTATTAAAGACCTCTTGGGCAAAGCTAATCCGGATTTAGTTATCTTGCAAGAGTCTAGATTATCTTATATTGATAGACGTATAATTAAGTCGATTTGGAGCTCCCGGCATATTGGTTGGATAGCCCTTGAGGCGATTGATTCCGCTGGAGGCATTCTGATCATGTGGAAGGATTCTGTCATAGATGTAGTCAACTCGGTGTTGGGGGAATTCTCCATCTCGATTGAGTGTGTTGTTAATGGCCATCTCGTTGGATGGATTTCAGGGGTCTACGGTCCTTGCCATTATCGGGATCGAAAGAGATTTATCAGGGAGCTCTATGATCTGTACGGGCTGTGTCATGAAGTTTGGTGTGTGGCTGGAGATTTCAACATGGTCAGATGGACCGAGGAAAGATTGAACAACACCCAAATTTCCAGATGTATGAAGAAATTCAACAAGTTTATTGCAGCGACTGGTTTGATTGACCCTCAGATGATGAATGGTAAGTTTTCTTGGTCCAGTATGGGTGAACGAAGGGCTGCGTCTAGGATTGATAGATTTCTCGTTTCCAAAAAATGGGATGACTACTTCAAGGTAAACAGGCTTGAGCGGTTAAACAGACCCACTTCTGATCATTTTCCTATTATGTTGTCTGCAGGTGCCTTTAAGTGGGGTCCAACCCCCTTCAGATTCGAGAATAGTTGGCTCGACAATAAGGATCTTAGGGGCCTTATAGAGCAGTGGTGGCTTGAGATTAATCCAATAGGATGGGCTGGTTACAGATTTATGGAAAAGCTAAGAGGGCTGAAACAAAAGCTGAAAGTTTGGAGCAAGGAGGCTGTTGAACAGATGAACAAAAAGAATCTCCTAATCTCTCAAATCGAGAGCTTAGATAGGCTAGAGGAGCAAGGTACCATTCATTCTCAACAGATCCAAGAGAGAAAAGCTATGAAGAGTGAGCTGATGGAAATAACCATCAGTGAGCACAGAAGTTTAAATCAGAAAAGTAAGATTAAGTGGTTGAATGAAGGTGACGAGAATACCTCTTTTTTTCACAAATGGACCTCGGCCAGGAAATCTAGGGCTTTCATTTCGTTCTTGGAAACAAATGAGGGATCTATTTTAGCCTCTGAAAATAACATTGAGCAAGAGATAATTGGCTACTATAGTGATCTGTATACAGCTGATGGTGAGTCCAGATTTGTGCTTGAAGGCATTGATTGGAAAAAGCAAGATGCTCCTAGCAGACAACGGTTAGAGCAACAGTTCAGTGAGGAAGAGATAGGTAGAGCAGTGAAGGAATTGGGCAACCTTAAATCTCCTGGACCGGATAGTATGACTGGTGAATTTTTTAAAAATTTTTGGAACATCTTGAAATCTGATTTAGTAGAGGTGTTCCAGGAATTTTTTGAAAATGGTATTATCAATAAAAGAACCAACGAGACGTACATTTGCTTGATTCCAAAGAAGAACAGGGCAGCCAAGGTTAGGGACTTTCGGCCCATTAGTTTTGTCACTTCCCTATACAAAATCATAGCCAAAGTTTTAGCCGATAGATTGAAGAAGGTGCTTCCCCTCACCATCAGCGATTTTCAGGCAGCCTTTATGCAAGGTAGACAGATCCTACATGATATTCTTGTGGCAACTGAAGCAGTGGAAGAGAAAAGATTGAACAAAGAGAAAGGGGTTTTACTCAAGCTGGACCTCGAAAAGGCTTATGATAGAGTTAGTTGGGATTTCCTTGATGTCATCCTTGAGCTCAAAGGCTTCGGGCAAAAGTGGAGAAAGTGGATGAAGGGCTGCCTAATGAACACAAACTTTTCTGTTCTCATTAATGGTAAACCGCGTGGGAAGATCATTGCCTCTAGGGGTTTGAGACAAGGGGATCCCCTATCTCCTTTCCTTTTTACCATTGTTGGGGATGCCATTAGTAGATCCATTCACTATTGCATTGAAAAGAAAACCTTGAAGGGCTGGTTAGTGGGAAGAGATAGAACCCCGGTGTCTATTCTCCAATACGCTGATGACACACTTTTGTTTTGCCCTTATAATGCCCTTGAAGTGCAGAAATGGTGGGAGATCCTCAACATTGTCCTAAAAGGCTCGGGCCTTACAGTGAATATGGCTAAAACTTCAATGATTGGGATTAACATAGATAAGTTAGAGATGGATGCTTGGGCAAAGGACCTCGGTTGTCAATGTGGAGAGCTCCCTATGAACTACCTTGGTTTTCCCATGGGTGGTAATTTCTGGAATAAGGCCTTTTGGAATCCTTTGATTGAAGAGATTCCCTATTCCAAAAGGTGGAAGAGTTACCCTTGTTCAAGCTACTCTTAATAGCCTCCCCGTGTATTTTTTTTCCCTCCTCAAAGCCCCTTCCTCGGCCATAAAGGCCATGGAGAAAATCAGTAGAGATTTCATATGGAATGGTGGTACCTATAAGCCTGGCAAAAATCTTGTGAAATGGGAATGGACCTCCCTCCCTTTGAGTCACAGAGGTTTGGGGGTGGGGGCTCTTCGTCAAAGAAATATAGCTCTAATCACTAAATGGTTGTGGAGATTTTCCCAAGAGAAAGAAGCCTCGTGGAGGAAAGTTGTTGCTAGTATTTATGGTGTGGCCTCTATGGGTTGGAAGTCAGGACAACACTGCAAGAAAAAAGGAAACAGAATATGGGCTGAAATTATCAAATTATACCCTGTTTTTGAATAGTTCACAAACTTTGTAGTCAAAAATGGGAAGAATATCAGTTTTTGGGAGGATGTTTGGTGTGATAACCAGCCACCGGATATTTTTGCCAGCACAGATAGAAAAGAAATCACAGTGGCGGATTGCTGGGATTTGGATAATTGTACTTGGAACCTTAGACTTCGAAGAGGTTTGTTTGTCTGGGAAATTCCTAGTTGGGCTGGTTTAGTATCGATTCTAAATGACATTAACTTGTCAAATGATCAGGCCAAGATTAGATGGAAAGTTGATCTGACTGGAGAATTTTCCACAAAATCTCTTTTTACAAATTTGTTTCAGTCATCTTCTAGATTTGGCCCCCCTATTACCAATATGATATGGAAACATAGAAGCCCAAAGAAGGTGAAGGTCTTTTTATGGTCCTTAATGTATCGTAGCCTCAATACAGACGACCGAATCCAAAGAAAATTCCAGCATTGGTCCCTATCTCCATCAGGCTGCCGGTTGTGTTTGAAAAAGGGGGAAGATCTAGATCACCTATTCCTCCATTGTGATTTTGCTTCAAAGGCTTGGAATTTCATAGCTAATCTCCTGGGCATCTCCTTTTGTTTCCCCTCGAGAGTTGAGGATTGGCTAAACGAGGGGCTTCACGGGTGA ATGGAGGGCCAGTCTGGTAGTCAAAAGAGGGCGGCCCAAGAGGATAATGAGACGCGAGCCCAAACCCGACCCAATCAAAAGAGAAGAACCAGCTTGAAGCCCAGAGCCAAAGGAAAAAAGGGGGTTTCGTTTAATGACAAAGCCCAAGTGACTTTTTTTAAGAAAGGAAACATCCAATCTTCAGAAAATCCTAACAGCCCACAACAGGAAAGAGACACGTTCATCAAAGGGGAGGGTTTTGAGTCTGAATACTCTATATCTAGCCCAGGTAGCAAAAGCCCACTTTTATTCTTGAGCGATGAAGAGGAAGATAGAAATACTCAGATCGAAAGCTCCACAAAAACAGAGCAACAAGAACGATATGACAGAAAAGGTAAAAGGAAAATTGAAGAATTTTGTCAAATGACTCCCGACCATGCAACAGAGGTATGTGATTTTATAGAAGAAGAATACCAAGATACCCAGACTATTAGTGTTGAAGACTGCCCGAAGGCTTTGGCTATAGTCCCTCCGAAGAAGCCACAGGAAACATGTAGAAACAATGGCTCCATAAGGATTCCCCTTGAGGCGATTGATTCCGCTGGAGGCATTCTGATCATGCTAGAGGAGCAAGGTACCATTCATTCTCAACAGATCCAAGAGAGAAAAGCTATGAAGAGTGAGCTGATGGAAATAACCATCAGTGAGCACAGAAGTTTAAATCAGAAAAGTAAGATTAAGTGGTTGAATGAAGGTGACGAGAATACCTCTTTTTTTCACAAATGGACCTCGGCCAGGAAATCTAGGGCTTTCATTTCGTTCTTGGAAACAAATGAGGGATCTATTTTAGCCTCTGAAAATAACATTGAGCAAGAGATAATTGGCTACTATAGTGATCTGTATACAGCTGATGGTGAGTCCAGATTTGTGCTTGAAGGCATTGATTGGAAAAAGCAAGATGCTCCTAGCAGACAACGATTCCCTATTCCAAAAGGTGGAAGAGTTACCCTTGTTCAAGCTACTCTTAATAGCCTCCCCGTGTATTTTTTTTCCCTCCTCAAAGCCCCTTCCTCGGCCATAAAGGCCATGGAGAAAATCAGTAGAGATTTCATATGGAATGGTGTCAAAAATGGGAAGAATATCAGTTTTTGGGAGGATGTTTGGTGTGATAACCAGCCACCGGATATTTTTGCCAGCACAGATAGAAAAGAAATCACAGTGGCGGATTGCTGGGATTTGGATAATTGTACTTGGAACCTTAGACTTCGAAGAGGTTTGTTTGTCTGGGAAATTCCTAGTTGGGCTGGTTTAGTATCGATTCTAAATGACATTAACTTGTCAAATGATCAGGCCAAGATTAGATGGAAAGTTGATCTGACTGGAGAATTTTCCACAAAATCTCTTTTTACAAATTTGTTTCAGTCATCTTCTAGATTTGGCCCCCCTATTACCAATATGATATGGAAACATAGAAGCCCAAAGAAGGTGAAGGTCTTTTTATGGTCCTTAATGTATCGTAGCCTCAATACAGACGACCGAATCCAAAGAAAATTCCAGCATTGGTCCCTATCTCCATCAGGCTGCCGGTTGTGTTTGAAAAAGGGGGAAGATCTAGATCACCTATTCCTCCATTGTGATTTTGCTTCAAAGGCTTGGAATTTCATAGCTAATCTCCTGGGCATCTCCTTTTGTTTCCCCTCGAGAGTTGAGGATTGGCTAAACGAGGGGCTTCACGGGTGA ATGGAGGGCCAGTCTGGTAGTCAAAAGAGGGCGGCCCAAGAGGATAATGAGACGCGAGCCCAAACCCGACCCAATCAAAAGAGAAGAACCAGCTTGAAGCCCAGAGCCAAAGGAAAAAAGGGGGTTTCGTTTAATGACAAAGCCCAAGTGACTTTTTTTAAGAAAGGAAACATCCAATCTTCAGAAAATCCTAACAGCCCACAACAGGAAAGAGACACGTTCATCAAAGGGGAGGGTTTTGAGTCTGAATACTCTATATCTAGCCCAGGTAGCAAAAGCCCACTTTTATTCTTGAGCGATGAAGAGGAAGATAGAAATACTCAGATCGAAAGCTCCACAAAAACAGAGCAACAAGAACGATATGACAGAAAAGGTAAAAGGAAAATTGAAGAATTTTGTCAAATGACTCCCGACCATGCAACAGAGGTATGTGATTTTATAGAAGAAGAATACCAAGATACCCAGACTATTAGTGTTGAAGACTGCCCGAAGGCTTTGGCTATAGTCCCTCCGAAGAAGCCACAGGAAACATGTAGAAACAATGGCTCCATAAGGATTCCCCTTGAGGCGATTGATTCCGCTGGAGGCATTCTGATCATGCTAGAGGAGCAAGGTACCATTCATTCTCAACAGATCCAAGAGAGAAAAGCTATGAAGAGTGAGCTGATGGAAATAACCATCAGTGAGCACAGAAGTTTAAATCAGAAAAGTAAGATTAAGTGGTTGAATGAAGGTGACGAGAATACCTCTTTTTTTCACAAATGGACCTCGGCCAGGAAATCTAGGGCTTTCATTTCGTTCTTGGAAACAAATGAGGGATCTATTTTAGCCTCTGAAAATAACATTGAGCAAGAGATAATTGGCTACTATAGTGATCTGTATACAGCTGATGGTGAGTCCAGATTTGTGCTTGAAGGCATTGATTGGAAAAAGCAAGATGCTCCTAGCAGACAACGATTCCCTATTCCAAAAGGTGGAAGAGTTACCCTTGTTCAAGCTACTCTTAATAGCCTCCCCGTGTATTTTTTTTCCCTCCTCAAAGCCCCTTCCTCGGCCATAAAGGCCATGGAGAAAATCAGTAGAGATTTCATATGGAATGGTGTCAAAAATGGGAAGAATATCAGTTTTTGGGAGGATGTTTGGTGTGATAACCAGCCACCGGATATTTTTGCCAGCACAGATAGAAAAGAAATCACAGTGGCGGATTGCTGGGATTTGGATAATTGTACTTGGAACCTTAGACTTCGAAGAGGTTTGTTTGTCTGGGAAATTCCTAGTTGGGCTGGTTTAGTATCGATTCTAAATGACATTAACTTGTCAAATGATCAGGCCAAGATTAGATGGAAAGTTGATCTGACTGGAGAATTTTCCACAAAATCTCTTTTTACAAATTTGTTTCAGTCATCTTCTAGATTTGGCCCCCCTATTACCAATATGATATGGAAACATAGAAGCCCAAAGAAGGTGAAGGTCTTTTTATGGTCCTTAATGTATCGTAGCCTCAATACAGACGACCGAATCCAAAGAAAATTCCAGCATTGGTCCCTATCTCCATCAGGCTGCCGGTTGTGTTTGAAAAAGGGGGAAGATCTAGATCACCTATTCCTCCATTGTGATTTTGCTTCAAAGGCTTGGAATTTCATAGCTAATCTCCTGGGCATCTCCTTTTGTTTCCCCTCGAGAGTTGAGGATTGGCTAAACGAGGGGCTTCACGGGTGA MEGQSGSQKRAAQEDNETRAQTRPNQKRRTSLKPRAKGKKGVSFNDKAQVTFFKKGNIQSSENPNSPQQERDTFIKGEGFESEYSISSPGSKSPLLFLSDEEEDRNTQIESSTKTEQQERYDRKGKRKIEEFCQMTPDHATEVCDFIEEEYQDTQTISVEDCPKALAIVPPKKPQETCRNNGSIRIPLEAIDSAGGILIMLEEQGTIHSQQIQERKAMKSELMEITISEHRSLNQKSKIKWLNEGDENTSFFHKWTSARKSRAFISFLETNEGSILASENNIEQEIIGYYSDLYTADGESRFVLEGIDWKKQDAPSRQRFPIPKGGRVTLVQATLNSLPVYFFSLLKAPSSAIKAMEKISRDFIWNGVKNGKNISFWEDVWCDNQPPDIFASTDRKEITVADCWDLDNCTWNLRLRRGLFVWEIPSWAGLVSILNDINLSNDQAKIRWKVDLTGEFSTKSLFTNLFQSSSRFGPPITNMIWKHRSPKKVKVFLWSLMYRSLNTDDRIQRKFQHWSLSPSGCRLCLKKGEDLDHLFLHCDFASKAWNFIANLLGISFCFPSRVEDWLNEGLHG Homology
BLAST of Spg029698 vs. NCBI nr
Match: CAN61757.1 (hypothetical protein VITISV_030741 [Vitis vinifera]) HSP 1 Score: 194.9 bits (494), Expect = 1.9e-45 Identity = 133/507 (26.23%), Postives = 208/507 (41.03%), Query Frame = 0
BLAST of Spg029698 vs. NCBI nr
Match: CAN66330.1 (hypothetical protein VITISV_000598 [Vitis vinifera]) HSP 1 Score: 166.0 bits (419), Expect = 9.5e-37 Identity = 90/253 (35.57%), Postives = 138/253 (54.55%), Query Frame = 0
BLAST of Spg029698 vs. NCBI nr
Match: CAN66330.1 (hypothetical protein VITISV_000598 [Vitis vinifera]) HSP 1 Score: 85.1 bits (209), Expect = 2.1e-12 Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 0
HSP 2 Score: 164.5 bits (415), Expect = 2.8e-36 Identity = 86/253 (33.99%), Postives = 128/253 (50.59%), Query Frame = 0
BLAST of Spg029698 vs. NCBI nr
Match: TYK10356.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 63.2 bits (152), Expect = 8.6e-06 Identity = 35/110 (31.82%), Postives = 63/110 (57.27%), Query Frame = 0
HSP 2 Score: 157.1 bits (396), Expect = 4.4e-34 Identity = 93/298 (31.21%), Postives = 135/298 (45.30%), Query Frame = 0
BLAST of Spg029698 vs. NCBI nr
Match: RVW53692.1 (putative ribonuclease H protein [Vitis vinifera]) HSP 1 Score: 75.9 bits (185), Expect = 1.3e-09 Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = 0
HSP 2 Score: 151.8 bits (382), Expect = 1.8e-32 Identity = 87/311 (27.97%), Postives = 141/311 (45.34%), Query Frame = 0
BLAST of Spg029698 vs. ExPASy TrEMBL
Match: A5BTG1 (zf-RVT domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_030741 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 9.2e-46 Identity = 133/507 (26.23%), Postives = 208/507 (41.03%), Query Frame = 0
BLAST of Spg029698 vs. ExPASy TrEMBL
Match: A5C3T9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_000598 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 4.6e-37 Identity = 90/253 (35.57%), Postives = 138/253 (54.55%), Query Frame = 0
BLAST of Spg029698 vs. ExPASy TrEMBL
Match: A5C3T9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_000598 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.0e-12 Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 0
HSP 2 Score: 164.5 bits (415), Expect = 1.3e-36 Identity = 86/253 (33.99%), Postives = 128/253 (50.59%), Query Frame = 0
BLAST of Spg029698 vs. ExPASy TrEMBL
Match: A0A5D3CJ08 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00340 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.2e-06 Identity = 35/110 (31.82%), Postives = 63/110 (57.27%), Query Frame = 0
HSP 2 Score: 157.1 bits (396), Expect = 2.1e-34 Identity = 93/298 (31.21%), Postives = 135/298 (45.30%), Query Frame = 0
BLAST of Spg029698 vs. ExPASy TrEMBL
Match: A0A438F215 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_275 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.2e-10 Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = 0
HSP 2 Score: 151.8 bits (382), Expect = 8.9e-33 Identity = 82/266 (30.83%), Postives = 130/266 (48.87%), Query Frame = 0
BLAST of Spg029698 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 4.9e-07 Identity = 24/65 (36.92%), Postives = 40/65 (61.54%), Query Frame = 0
BLAST of Spg029698 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 50.4 bits (119), Expect = 5.4e-06 Identity = 24/66 (36.36%), Postives = 36/66 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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