Spg029619 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg029619
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold2: 23564349 .. 23566867 (-)
RNA-Seq Expression	Spg029619
Synteny	Spg029619

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGAGATAAGGAGCGAGAGACCCATGGGTTCTTCACAAATCACTGTAGAACGAAGGCCCGCGGCTTCAACTTCCTCATCTGCGCAAATGTCGACTTCTAAGAGGGAGAATCCGAGTGGTTCACGTCACAAGAGACCAACACCCATTGATAGCCTCCACAAACGCATAAAACCGTGGAGAAGCCCCTCAGAAGCGCTCCAAGGAATGGTAAGCCATGATCCCAGAGATGAGAGCTAAGAGACATGCGGCCATAGAAGATGATGCAAGGTTGCGTGAAGCTGAAATTTATTCCCCTAAGGTAGGCGAAAGCTCACGACAAGGGGAAGGTGCAATGGGTAACGTTTCTAATCCCTCAACTAACTCTACTTCTTGCAAGGAAAAGTCGTTCGTAACCTATAGTGCAAAGAAGAAAAATTCCAAGAGAGAGGAGACTGAAAAGCCTCTGAATATTCAGCCTCGTCATGAGAGCTAAGATGCCAACCGATGTCTTTGAAAACATGGTTCGGTTAGCCGTTGCACAAGCCCTTGTAATCGCTTAAGGATACCGGGTTGAGCAAGATGCAATAAGTGAGATAAAGGCTGAGAAAGAAAGAGAACTACAATGCTTGAGTGCTGAAGATGAGCTAGGCTAGAAAAGAGATGTGGAGGATGAGAAGAAAACGAAGAAGAAGCTGAGAAAAAGAGAGAAAAGAAAAAACAAGAGGCCGAGAGGGCCTTAGAGAAGAAAAAGAAAAAATGAGGATGAAAAAGCAAGGAAGAAGATGAAGAACTAAGGGGCTGTGCTGAACCCAACTCCTTGCAGAAGAAAGGCAAGCAGAGAAACCCTTTGGAAAGAAGAAAACCGAAGGAAAGAGGCTGACGAATTTCTTGCAGCATTTGAGCCTCTACATAATGCTCAAAGGGAAGCTGAGGAGCTGCAAGAAACAGAAGAAAAGGCCCCTGAAGGGCCAAGTATTGAAGAACCAGAAAAAGAAGAAAAGAAGGCAGCAAAAGTCAGAATGCGATCACATTTGGGCAGCATTTTGAGGAAAATCAAGCTGAAGATGTGGATGATCAGCAAGATGTTGGGCCCTTTGATCCATTGTTCGAGTATGAAACTAGGGGACCTCACCAGATGCTGAAAGTTCTTCTTGGAAGAGAAAGAGGATGAAGAGAAAAAGGAAGAAAAAGAGGCCGAGACCTCTAGTGACAGTGAGACAAAAACAGATTCAGAGGTGAAGGAATTGGGACGAGGACCAAGTTCCTATTTCTTCAGCATTGAGGAAGAAGAGGAGAAGAGAAATTAGAGCTGAGGGTGAGGACAAAGAACAAGAATGATCTTATATTTGCGAAGAGGCAGAGGACTAGGTCCATGGACACCTCTCCTGTACCTCCTACCACCACACCTACCAAGCCAAAGGTTGCATCGCCAAAGGAATCCATTCCCTGAGGTCTTCAAAGATGTGAATTTCCAAGAAAGAATGGAGGTCATGAGGAAGCGAGACTTCTTGAATGAGAAGGGATTCTCAAACCGAGCAGGGACCTTGTCTGACTTCGTAACCAAAATTATTACTCAGTACAAGTGGCAAGAATTTTGTGTTCACCCTTAAGAGGTTGTGGTGCCTCTAGTCCGAGAGTTTTATGTAGGGCTGAGGGAAGAAAGTTTGAGTTTGGAGATTGTATGTGGGAAGATGGTGAGCTTCTCCTCAGTTGACATAAACAGGGTGTACCAAATCAAAGCTCCTTTGCATCTGAGAGGCAATGATGCAATAAAGAACCCTTCGACCAAGAAATTGAAAGAAGCATTAAAAGTGGTGGCCAGGAAGGGAGTTCAATGGAAAGAATCTCAGGACGAAAGTGAAGTCTCTTGTGCCAAGCGACCTAAAGCCGGAATCGAAAATTTGGCTTCACTTTATTAAAAACAGGTTGATGCCCACCACCCATGACAACACGATTTTAGTAGAGAGGGTCATGCTTCTCTACATCATAATGAAGGGGCTGGAAATTAATATTGGGAGCATCATTAGAGAAGAGATTTTGTCCTGCGGAAGAAAGAGAGCGGGGAAAGCTATTCTTTGGGTCCCTCGTAACCCAATTATGTTAGAGGGTCAAGATTGTTCCTGGGAAGGATGAGGAACGACATTTTTACAAGCCTACCATTGACTTGCCTCTGATCGAGAAGCTGCAGCAGAACAATGCGCAAAGGAAAGATAAAGCTTCGGCCTCGCATGCTAATCCTTCCCCGAGGCTGACACCTGGCTTCACCTCTAGCACATACTCTTATTTCAGGGCCTACACCATCATCCGAGGTCCTTGCATTTGCTTACCGCCAGCTAGACCGTATTGAAGATAGATTGAAAACTTATTGGGTCTATGCAAAGGAGAGGGATGAAGCAATTAGAGAGTTTTATCTCTCTATCGCCCCGAGCGTCGCCCCTGTTTTTCCTTGTTTTCCTCAAAGCTTGCTGCCTCAAGATGAAGAAGAATCTGACAAAGAAGAAGAAGAAGTTGACGAAGGTTCCTCGGAGGAGGAATAG

mRNA sequence

ATGCACGAGATAAGGAGCGAGAGACCCATGGGTTCTTCACAAATCACTGTAGAACGAAGGCCCGCGGCTTCAACTTCCTCATCTGCGCAAATGTCGACTTCTAAGAGGGAGAATCCGAGTGGTTCACGTCACAAGAGACCAACACCCATTGATAGCCTCCACAAACGCATAAAACCGTGGAGAAGCCCCTCAGAAGCGCTCCAAGGAATGGCGAAAGCTCACGACAAGGGGAAGGTGCAATGGGTAACGTTTCTAATCCCTCAACTAACTCTACTTCTTGCAAGGAAAAGTCGTTCAAGAAAGGCAAGCAGAGAAACCCTTTGGAAAGAAGAAAACCGAAGGAAAGAGGCTGACGAATTTCTTGCAGCATTTGAGCCTCTACATAATGCTCAAAGGGAAGCTGAGGAGCTGCAAGAAACAGAAGAAAAGGCCCCTGAAGGGCCAAGTATTGAAGAACCAGAAAAAGAAGAAAAGAAGGCAGCAAAAGTCAGAATGCGATCACATTTGGGCAGCATTTTGAGGAAAATCAAGCTGAAGATGTGGATGATCAGCAAGATGTTGGGCCCTTTGATCCATTGTTCGATCCGAGAGTTTTATGTAGGGCTGAGGGAAGAAAGTTTGAGTTTGGAGATTGTATGTGGGAAGATGGTGAGCTTCTCCTCAGTTGACATAAACAGGGTGTACCAAATCAAAGCTCCTTTGCATCTGAGAGGCAATGATGCAATAAAGAACCCTTCGACCAAGAAATTGAAAGAAGCATTAAAAGTGGTGGCCAGGAAGGGAGTTCAATGGAAAGAATCTCAGGACGAAAGGCCTACACCATCATCCGAGGTCCTTGCATTTGCTTACCGCCAGCTAGACCGTATTGAAGATAGATTGAAAACTTATTGGGTCTATGCAAAGGAGAGGGATGAAGCAATTAGAGAGTTTTATCTCTCTATCGCCCCGAGCGTCGCCCCTGTTTTTCCTTGTTTTCCTCAAAGCTTGCTGCCTCAAGATGAAGAAGAATCTGACAAAGAAGAAGAAGAAGTTGACGAAGGTTCCTCGGAGGAGGAATAG

Coding sequence (CDS)

ATGCACGAGATAAGGAGCGAGAGACCCATGGGTTCTTCACAAATCACTGTAGAACGAAGGCCCGCGGCTTCAACTTCCTCATCTGCGCAAATGTCGACTTCTAAGAGGGAGAATCCGAGTGGTTCACGTCACAAGAGACCAACACCCATTGATAGCCTCCACAAACGCATAAAACCGTGGAGAAGCCCCTCAGAAGCGCTCCAAGGAATGGCGAAAGCTCACGACAAGGGGAAGGTGCAATGGGTAACGTTTCTAATCCCTCAACTAACTCTACTTCTTGCAAGGAAAAGTCGTTCAAGAAAGGCAAGCAGAGAAACCCTTTGGAAAGAAGAAAACCGAAGGAAAGAGGCTGACGAATTTCTTGCAGCATTTGAGCCTCTACATAATGCTCAAAGGGAAGCTGAGGAGCTGCAAGAAACAGAAGAAAAGGCCCCTGAAGGGCCAAGTATTGAAGAACCAGAAAAAGAAGAAAAGAAGGCAGCAAAAGTCAGAATGCGATCACATTTGGGCAGCATTTTGAGGAAAATCAAGCTGAAGATGTGGATGATCAGCAAGATGTTGGGCCCTTTGATCCATTGTTCGATCCGAGAGTTTTATGTAGGGCTGAGGGAAGAAAGTTTGAGTTTGGAGATTGTATGTGGGAAGATGGTGAGCTTCTCCTCAGTTGACATAAACAGGGTGTACCAAATCAAAGCTCCTTTGCATCTGAGAGGCAATGATGCAATAAAGAACCCTTCGACCAAGAAATTGAAAGAAGCATTAAAAGTGGTGGCCAGGAAGGGAGTTCAATGGAAAGAATCTCAGGACGAAAGGCCTACACCATCATCCGAGGTCCTTGCATTTGCTTACCGCCAGCTAGACCGTATTGAAGATAGATTGAAAACTTATTGGGTCTATGCAAAGGAGAGGGATGAAGCAATTAGAGAGTTTTATCTCTCTATCGCCCCGAGCGTCGCCCCTGTTTTTCCTTGTTTTCCTCAAAGCTTGCTGCCTCAAGATGAAGAAGAATCTGACAAAGAAGAAGAAGAAGTTGACGAAGGTTCCTCGGAGGAGGAATAG

Protein sequence

MHEIRSERPMGSSQITVERRPAASTSSSAQMSTSKRENPSGSRHKRPTPIDSLHKRIKPWRSPSEALQGMAKAHDKGKVQWVTFLIPQLTLLLARKSRSRKASRETLWKEENRRKEADEFLAAFEPLHNAQREAEELQETEEKAPEGPSIEEPEKEEKKAAKVRMRSHLGSILRKIKLKMWMISKMLGPLIHCSIREFYVGLREESLSLEIVCGKMVSFSSVDINRVYQIKAPLHLRGNDAIKNPSTKKLKEALKVVARKGVQWKESQDERPTPSSEVLAFAYRQLDRIEDRLKTYWVYAKERDEAIREFYLSIAPSVAPVFPCFPQSLLPQDEEESDKEEEEVDEGSSEEE

Homology

The following BLAST results are available for this feature:

BLAST of Spg029619 vs.


Match Name	E-value	Identity	Description

BLAST of Spg029619 vs.


Match Name	E-value	Identity	Description

BLAST of Spg029619 vs.


Match Name	E-value	Identity	Description

BLAST of Spg029619 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg029619.1	Spg029619.1	mRNA