Spg029601 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg029601
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein
Locationscaffold2: 23361849 .. 23364607 (-)
RNA-Seq ExpressionSpg029601
SyntenySpg029601
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCCAGAGGCAAAACCGGCAAGCGGGACGGGTCAAGACCGAAGGGGTCGGGCGCCTTGCCCGACCCCCCTGCTCGGCCTCGGCCCATGGTCGGCCTCGGCCCATGGCCAAGGCCGACCCTCGGCCCGCTTGCGCGGGCCGAGTCCCACCGACTCCGCTCGATCCCTGCAGTCTTCAGCCGCCCCGGTTCCGCCTGGTTCGTCCTGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGGTATTTATACCCCTCTTCGCCACTGAAGAAGGGGACCCGAACTCAATTCTCGACTCTCTTTCCCTTGCTCTCTAGCTCTCCCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTCTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTCACCGTTGATGGCACGTGAAGGTCAGGTGAGTTTCCTCTGACCAAAATCGACCATCAACAACGACAACAAATCTGAGGGAGGACCACAAACTTTGTCGGTATGTAAGCTTTTTTTTTTTTTTTAGTTTTTTTTCATCTCATTGTGATATTTTTTTTATTATACATGTTATTTTGGAGTTATTTTGTTGGTGTTTGGTTATTTGATTTTTTTTTTTTTTTGAAAATGGTTATTTGATTATTGTGTTTTATTATTTGTTGAATTTTTTTAGATTGGAATAAAAAACATAATAATTTATTTTGTGTTTAGAAATATTACTATATTTAATTAGTTTAAAGTTGATTAGTTTTCTTAATTACATTATTGTATTTTGGTATTTGTTGGATTTTTTTAGATTAATATGAATAATGTAGATTGTTGTTTTTAGAAATATTAATATATTTGATTAGTATAAAGTATATTGATTTTCTTAATTAGATTATTGTAGTTTAGGATTTGTTGTATTTTTTAGATTTGCATGAATAACATATCAATTATTGTTGTTTTTAGGAAATATTAGTATATTTAATTAATTTAAGGTTCGTTAGTTTTTTTTTTAATTAGATTATTGTATTTTAGTATTAGTTGGATTTTTTTTTTATATTAGCACGAATAGTATAATAATCTTGTTAGATTTTAGTAACATTAGCATAATTAATTATTTTAAAGTTTATTATTTTTCTTAATTAGTTACTAGTATTTTAATATTGGTTGGATTAGATAATCTTGTTAGATTTTACTAATTTTATATCTTATTTATTTCGTCATAGAAAAATGGAAGACAAATGTCTGAGATTTATTTTGCATACAAATGGTTGCATGATTGATGGTGTAGATGGAGTTGAATATGACCAACCACCTTGTGGAGGTTTTACACTTAATGTGAATAGTGGGGTTGTGTTTGAACAATTTGTTGAAATGGTTGGGATGTCAATTGGTGTAGATGTAAGGGTCAATCAATTAGAGATAGTGTACAAGCACCCTAAGGTAACACTGTCAGGATCTGTAAGGTTTATGCCAATATCAATTCCCAACATTCAAGCGATGAAGTTAATGTTTTCGATTGCGATGCCTGTCCCAAATTTAATACATTTATATGTCACTGTGGGAAGGATAGACATTGATGTTCCAAATGAAGGCGAAACTCTTAGCCAATGTCTTGAACCTAGTCAATGTCTTGACCTTGAACCTGAATCGGTTGTGCCACCATGTGATGGTGAAGATATGGTGGTAGATAATACTTTTAAAGACCTAAGGACCGAGACAGATGATGAATTTGAAGAATTGGGTTTCGATGGTCGTGAGCATACTGTCCCTTTAGAAACATTCACTCACTTGGATATGGATGTCATAGATAGCATTACAAAACATGATCATATTGTAGCCCCAACAATCGTTGAAAATTACTTATTATATACGGGGCTAATATGTCAAAACAAGGAAATTCTTCAACACTTGGTAAAATGTTTTGCAGGTAAGTGTCATGCACCGTATGAAGTTGTTGAGTCAACACCAGCAATATGGGCAATACGATGTAAGAAGTGGTAAGATGGTTGCAAATGGCGACTTCGTGCCATTAAAAAAAAAATCACATGGACTTTTTGAGATCACTCAGTATGTTGATCAACATGTCTGTTTTTATTCAGAACTAAACCAGAGTCATGCACAACTAGATTCTTCGATGATTGCGTTGGAATTCTGTGAATCAGTGAAAGAGAAACCTTCGATTAGCGTGTTAAAACTACAATCTGAAATAAGATCTAAGTTTGGGTATCATGTTCCTTACCATAGAGTGTGGAAAGGAAAAAGAAAAGCTTTAGCCAAAGTCTTTGGCGATTGGGATGAATCGTATAAACTTCTACCCAAGTGGATGTATATGGTGAAACACACTAATCCTGACACACGAGTAGAGTGGAAAATAAAGACTACACAGAGTGAAGGACATGCCATCCTTACTTCTGTTTTTTGGGCATTTGGACCTTGCATTGAGGCTTTTAAGTATTGTCTGAAGGATTGGAATTTCCAATTCCGTTACAGCGGAAACAATTGGACTGAATCGTATTTTAATTTCGTTCTACAAAATACTAGTACATTGGCAAAATTCAGAATTCATAATTCTACAAAATTAAGGTTAAGCAAACTCACCGTCGTTGTCGATTCAGAACGACCAAGAACGCCTTCTTGATTTGCAGGGACTAAAAGCGAAATCACCAACGATATTTTAGACACCACCATGAGATTTTCCCGCTATCCTCTGAGATCAGGAACGAGATTGTGGGATCTCTGA

mRNA sequence

ATGGATCCCAGAGGCAAAACCGGCAAGCGGGACGGGTCAAGACCGAAGGGGTCGGGCGCCTTGCCCGACCCCCCTGCTCGGCCTCGGCCCATGGTCGGCCTCGGCCCATGGCCAAGGCCGACCCTCGGCCCGCTTGCGCGGGCCGAGTCCCACCGACTCCGCTCGATCCCTGCAGTCTTCAGCCGCCCCGGTTCCGCCTGGTTCGTCCTGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTCTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTCACCGTTGATGGCACGTGAAGATGGAGTTGAATATGACCAACCACCTTGTGGAGGTTTTACACTTAATGTGAATAGTGGGGTTGTGTTTGAACAATTTGTTGAAATGGTTGGGATGTCAATTGGTGTAGATGTAAGGGTCAATCAATTAGAGATAGTGTACAAGCACCCTAAGGTAACACTGTCAGGATCTGTAAGGTTTATGCCAATATCAATTCCCAACATTCAAGCGATGAAGTTAATGTTTTCGATTGCGATGCCTGTCCCAAATTTAATACATTTATATGTCACTGTGGGAAGGATAGACATTGATGTTCCAAATGAAGGCGAAACTCTTAGCCAATGTCTTGAACCTAGTCAATGTCTTGACCTTGAACCTGAATCGGTTGTGCCACCATGGACTAAAAGCGAAATCACCAACGATATTTTAGACACCACCATGAGATTTTCCCGCTATCCTCTGAGATCAGGAACGAGATTGTGGGATCTCTGA

Coding sequence (CDS)

ATGGATCCCAGAGGCAAAACCGGCAAGCGGGACGGGTCAAGACCGAAGGGGTCGGGCGCCTTGCCCGACCCCCCTGCTCGGCCTCGGCCCATGGTCGGCCTCGGCCCATGGCCAAGGCCGACCCTCGGCCCGCTTGCGCGGGCCGAGTCCCACCGACTCCGCTCGATCCCTGCAGTCTTCAGCCGCCCCGGTTCCGCCTGGTTCGTCCTGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTCTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTCACCGTTGATGGCACGTGAAGATGGAGTTGAATATGACCAACCACCTTGTGGAGGTTTTACACTTAATGTGAATAGTGGGGTTGTGTTTGAACAATTTGTTGAAATGGTTGGGATGTCAATTGGTGTAGATGTAAGGGTCAATCAATTAGAGATAGTGTACAAGCACCCTAAGGTAACACTGTCAGGATCTGTAAGGTTTATGCCAATATCAATTCCCAACATTCAAGCGATGAAGTTAATGTTTTCGATTGCGATGCCTGTCCCAAATTTAATACATTTATATGTCACTGTGGGAAGGATAGACATTGATGTTCCAAATGAAGGCGAAACTCTTAGCCAATGTCTTGAACCTAGTCAATGTCTTGACCTTGAACCTGAATCGGTTGTGCCACCATGGACTAAAAGCGAAATCACCAACGATATTTTAGACACCACCATGAGATTTTCCCGCTATCCTCTGAGATCAGGAACGAGATTGTGGGATCTCTGA

Protein sequence

MDPRGKTGKRDGSRPKGSGALPDPPARPRPMVGLGPWPRPTLGPLARAESHRLRSIPAVFSRPGSAWFVLKRLRIPKNPRSTSSIGGGVASTTPVCRFSLLQATSSPSSTNSPLMAREDGVEYDQPPCGGFTLNVNSGVVFEQFVEMVGMSIGVDVRVNQLEIVYKHPKVTLSGSVRFMPISIPNIQAMKLMFSIAMPVPNLIHLYVTVGRIDIDVPNEGETLSQCLEPSQCLDLEPESVVPPWTKSEITNDILDTTMRFSRYPLRSGTRLWDL
Homology
BLAST of Spg029601 vs. NCBI nr
Match: KAA0041167.1 (uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 1.5e-32
Identity = 66/130 (50.77%), Postives = 97/130 (74.62%), Query Frame = 0

Query: 111 NSPLMAREDGVEYDQPPCGGFTLNVNSGVVFEQFVEMVGMSIGVDVRVNQLEIVYKHPKV 170
           N  ++   DG++YDQP CGGFT++VNSG+VFEQF+E+VG S+G+D+R++ +EI+Y+HP +
Sbjct: 13  NGNMIDGSDGIDYDQPACGGFTISVNSGIVFEQFIEIVGSSVGIDIRISDIEIIYRHPDL 72

Query: 171 TLSGSVRFMPISIPNIQAMKLMFSIAMPVPNLIHLYVTVGRIDIDVPNEGETLSQCLEPS 230
           T SG +RFMP  IPN QAMK MFSIAMP+ N++HLYV V R+ +D+    ++  Q  + +
Sbjct: 73  TPSGLIRFMPFPIPNEQAMKTMFSIAMPISNMVHLYVNVSRVSLDINLNSKSFCQLEDRT 132

Query: 231 QCLDLEPESV 241
           Q +  + E V
Sbjct: 133 QVIVPDSELV 142

BLAST of Spg029601 vs. NCBI nr
Match: TYJ98387.1 (hypothetical protein E5676_scaffold232G001340 [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 3.4e-16
Identity = 48/100 (48.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query: 147 MVGMSIGVDVRVNQLEIVYKHPKVTLSGSVRFMPISIPNIQAMKLMFSIAMPVPNLIHLY 206
           MVG+S+GVD+  +Q+EI+Y+HP +T SG+VRFMP  I N Q M  MFSIA+P PN++HLY
Sbjct: 1   MVGLSVGVDMSSSQIEIIYRHPNLTTSGTVRFMPFPISNEQKMNTMFSIALPFPNMVHLY 60

Query: 207 VTVGRIDIDVPNEGETLSQCLEPS---QCLDLEPESVVPP 244
           VTV  +D+        ++  +EP+   + +D++PES  PP
Sbjct: 61  VTVSMVDL-------AINLNVEPTYVEEYVDVDPESDAPP 93

BLAST of Spg029601 vs. NCBI nr
Match: TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 4.4e-16
Identity = 49/100 (49.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query: 147 MVGMSIGVDVRVNQLEIVYKHPKVTLSGSVRFMPISIPNIQAMKLMFSIAMPVPNLIHLY 206
           MVG+S+GVD+  +Q+EI+Y+HP +T SG+VRFMP  I N Q M  MFSIA+P PN++HLY
Sbjct: 1   MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFMPFPISNEQEMNTMFSIALPFPNMVHLY 60

Query: 207 VTVGRIDIDVPNEGETLSQCLEP---SQCLDLEPESVVPP 244
           VTV  +D         ++  +EP    + +D+EPES  PP
Sbjct: 61  VTVSMVD-------TAINLNVEPRYVEEYVDVEPESDAPP 93

BLAST of Spg029601 vs. NCBI nr
Match: KAA0034014.1 (uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa])

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-15
Identity = 48/100 (48.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query: 147 MVGMSIGVDVRVNQLEIVYKHPKVTLSGSVRFMPISIPNIQAMKLMFSIAMPVPNLIHLY 206
           MVG+S+GVD+  +Q+EI+Y+HP +T SG+VRF+P  I N Q M  MFSIA+P PN++HLY
Sbjct: 1   MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFIPFPISNEQEMNTMFSIALPFPNMVHLY 60

Query: 207 VTVGRIDIDVPNEGETLSQCLEP---SQCLDLEPESVVPP 244
           VTV  +D         ++  +EP    + +D+EPES  PP
Sbjct: 61  VTVSMVD-------TAINLNVEPRYVEEYVDVEPESDAPP 93

BLAST of Spg029601 vs. NCBI nr
Match: ADN34152.1 (hypothetical protein [Cucumis melo subsp. melo] >KAA0037868.1 hypothetical protein E6C27_scaffold36G00320 [Cucumis melo var. makuwa] >TYJ98006.1 hypothetical protein E5676_scaffold487G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-14
Identity = 47/100 (47.00%), Postives = 67/100 (67.00%), Query Frame = 0

Query: 147 MVGMSIGVDVRVNQLEIVYKHPKVTLSGSVRFMPISIPNIQAMKLMFSIAMPVPNLIHLY 206
           MVG+S+GVD+  +Q+EI+Y+HP +T SG+VRFM   I N Q M  MFSIA+P PN++HLY
Sbjct: 1   MVGLSLGVDMNSSQIEIIYRHPNLTASGTVRFMSFPISNEQEMNTMFSIALPFPNMVHLY 60

Query: 207 VTVGRIDIDVPNEGETLSQCLEP---SQCLDLEPESVVPP 244
           VTV  ID         ++  +EP    + +D++P+S  PP
Sbjct: 61  VTVSMID-------SAINLNVEPKYVEEYVDVDPKSDAPP 93

BLAST of Spg029601 vs. ExPASy TrEMBL
Match: A0A5A7THR5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00980 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 7.3e-33
Identity = 66/130 (50.77%), Postives = 97/130 (74.62%), Query Frame = 0

Query: 111 NSPLMAREDGVEYDQPPCGGFTLNVNSGVVFEQFVEMVGMSIGVDVRVNQLEIVYKHPKV 170
           N  ++   DG++YDQP CGGFT++VNSG+VFEQF+E+VG S+G+D+R++ +EI+Y+HP +
Sbjct: 13  NGNMIDGSDGIDYDQPACGGFTISVNSGIVFEQFIEIVGSSVGIDIRISDIEIIYRHPDL 72

Query: 171 TLSGSVRFMPISIPNIQAMKLMFSIAMPVPNLIHLYVTVGRIDIDVPNEGETLSQCLEPS 230
           T SG +RFMP  IPN QAMK MFSIAMP+ N++HLYV V R+ +D+    ++  Q  + +
Sbjct: 73  TPSGLIRFMPFPIPNEQAMKTMFSIAMPISNMVHLYVNVSRVSLDINLNSKSFCQLEDRT 132

Query: 231 QCLDLEPESV 241
           Q +  + E V
Sbjct: 133 QVIVPDSELV 142

BLAST of Spg029601 vs. ExPASy TrEMBL
Match: A0A5D3BGY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G001340 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-16
Identity = 48/100 (48.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query: 147 MVGMSIGVDVRVNQLEIVYKHPKVTLSGSVRFMPISIPNIQAMKLMFSIAMPVPNLIHLY 206
           MVG+S+GVD+  +Q+EI+Y+HP +T SG+VRFMP  I N Q M  MFSIA+P PN++HLY
Sbjct: 1   MVGLSVGVDMSSSQIEIIYRHPNLTTSGTVRFMPFPISNEQKMNTMFSIALPFPNMVHLY 60

Query: 207 VTVGRIDIDVPNEGETLSQCLEPS---QCLDLEPESVVPP 244
           VTV  +D+        ++  +EP+   + +D++PES  PP
Sbjct: 61  VTVSMVDL-------AINLNVEPTYVEEYVDVDPESDAPP 93

BLAST of Spg029601 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.1e-16
Identity = 49/100 (49.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query: 147 MVGMSIGVDVRVNQLEIVYKHPKVTLSGSVRFMPISIPNIQAMKLMFSIAMPVPNLIHLY 206
           MVG+S+GVD+  +Q+EI+Y+HP +T SG+VRFMP  I N Q M  MFSIA+P PN++HLY
Sbjct: 1   MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFMPFPISNEQEMNTMFSIALPFPNMVHLY 60

Query: 207 VTVGRIDIDVPNEGETLSQCLEP---SQCLDLEPESVVPP 244
           VTV  +D         ++  +EP    + +D+EPES  PP
Sbjct: 61  VTVSMVD-------TAINLNVEPRYVEEYVDVEPESDAPP 93

BLAST of Spg029601 vs. ExPASy TrEMBL
Match: A0A5A7SS31 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00820 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.2e-16
Identity = 48/100 (48.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query: 147 MVGMSIGVDVRVNQLEIVYKHPKVTLSGSVRFMPISIPNIQAMKLMFSIAMPVPNLIHLY 206
           MVG+S+GVD+  +Q+EI+Y+HP +T SG+VRF+P  I N Q M  MFSIA+P PN++HLY
Sbjct: 1   MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFIPFPISNEQEMNTMFSIALPFPNMVHLY 60

Query: 207 VTVGRIDIDVPNEGETLSQCLEP---SQCLDLEPESVVPP 244
           VTV  +D         ++  +EP    + +D+EPES  PP
Sbjct: 61  VTVSMVD-------TAINLNVEPRYVEEYVDVEPESDAPP 93

BLAST of Spg029601 vs. ExPASy TrEMBL
Match: A0A5D3BFY6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00290 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.3e-15
Identity = 47/100 (47.00%), Postives = 67/100 (67.00%), Query Frame = 0

Query: 147 MVGMSIGVDVRVNQLEIVYKHPKVTLSGSVRFMPISIPNIQAMKLMFSIAMPVPNLIHLY 206
           MVG+S+GVD+  +Q+EI+Y+HP +T SG+VRFM   I N Q M  MFSIA+P PN++HLY
Sbjct: 1   MVGLSLGVDMNSSQIEIIYRHPNLTASGTVRFMSFPISNEQEMNTMFSIALPFPNMVHLY 60

Query: 207 VTVGRIDIDVPNEGETLSQCLEP---SQCLDLEPESVVPP 244
           VTV  ID         ++  +EP    + +D++P+S  PP
Sbjct: 61  VTVSMID-------SAINLNVEPKYVEEYVDVDPKSDAPP 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0041167.11.5e-3250.77uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa][more]
TYJ98387.13.4e-1648.00hypothetical protein E5676_scaffold232G001340 [Cucumis melo var. makuwa][more]
TYJ95836.14.4e-1649.00serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
KAA0034014.11.3e-1548.00uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa][more]
ADN34152.11.1e-1447.00hypothetical protein [Cucumis melo subsp. melo] >KAA0037868.1 hypothetical prote... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7THR57.3e-3350.77Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BGY91.6e-1648.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BAB02.1e-1649.00Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5A7SS316.2e-1648.00DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5D3BFY65.3e-1547.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg029601.1Spg029601.1mRNA