Spg029323 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTCAAAATCCCATTTCCCGTTCTCTCCTCCTCTTCCTCTTCACAATTCTCCTCATCACCACCCCTCTCTCCGCCGCCCGTGGCCTCCCCGCCGCCGCACAACATCCAGCAAATGATCCTCTCCGCCCACCCACCACCTCAACAACATTCTCACTCACGGAGCCAACTGCCGCCGTGGAGGACGTCACCACACCCGGAAATTACTTCGCCGCCGTTTCGCTCCGGAAAGTCCCCGGCGGACCGAACCCGCTCCATAACTAA ATGGCTTCTCAAAATCCCATTTCCCGTTCTCTCCTCCTCTTCCTCTTCACAATTCTCCTCATCACCACCCCTCTCTCCGCCGCCCGTGGCCTCCCCGCCGCCGCACAACATCCAGCAAATGATCCTCTCCGCCCACCCACCACCTCAACAACATTCTCACTCACGGAGCCAACTGCCGCCGTGGAGGACGTCACCACACCCGGAAATTACTTCGCCGCCGTTTCGCTCCGGAAAGTCCCCGGCGGACCGAACCCGCTCCATAACTAA ATGGCTTCTCAAAATCCCATTTCCCGTTCTCTCCTCCTCTTCCTCTTCACAATTCTCCTCATCACCACCCCTCTCTCCGCCGCCCGTGGCCTCCCCGCCGCCGCACAACATCCAGCAAATGATCCTCTCCGCCCACCCACCACCTCAACAACATTCTCACTCACGGAGCCAACTGCCGCCGTGGAGGACGTCACCACACCCGGAAATTACTTCGCCGCCGTTTCGCTCCGGAAAGTCCCCGGCGGACCGAACCCGCTCCATAACTAA MASQNPISRSLLLFLFTILLITTPLSAARGLPAAAQHPANDPLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGGPNPLHN Homology
BLAST of Spg029323 vs. NCBI nr
Match: KAA0042782.1 (F-box/LRR-repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 102.1 bits (253), Expect = 2.6e-18 Identity = 60/88 (68.18%), Postives = 63/88 (71.59%), Query Frame = 0
BLAST of Spg029323 vs. NCBI nr
Match: KAG6579492.1 (hypothetical protein SDJN03_23940, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.4 bits (215), Expect = 6.6e-14 Identity = 57/89 (64.04%), Postives = 60/89 (67.42%), Query Frame = 0
BLAST of Spg029323 vs. NCBI nr
Match: KGN50125.1 (hypothetical protein Csa_000058 [Cucumis sativus]) HSP 1 Score: 87.0 bits (214), Expect = 8.6e-14 Identity = 60/92 (65.22%), Postives = 62/92 (67.39%), Query Frame = 0
BLAST of Spg029323 vs. NCBI nr
Match: KAG6606114.1 (Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 70.9 bits (172), Expect = 6.4e-09 Identity = 50/82 (60.98%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of Spg029323 vs. ExPASy TrEMBL
Match: A0A5A7THA6 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002830 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.2e-18 Identity = 60/88 (68.18%), Postives = 63/88 (71.59%), Query Frame = 0
BLAST of Spg029323 vs. ExPASy TrEMBL
Match: A0A0A0KKA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154870 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.2e-14 Identity = 60/92 (65.22%), Postives = 62/92 (67.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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