Spg029318 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg029318
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin-conjugating enzyme E2
Locationscaffold12: 35981710 .. 35986433 (-)
RNA-Seq ExpressionSpg029318
SyntenySpg029318
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCTCTTCTCTCAGGCAAAACAACAAACACGCAGGAGGATCTCAAGGTGAGAGTTCTATTCCTTTCTTCTCTTCGCTGCTTGTATTCTTTTTGGTGTATTCATTTCTTTGGTTCTTTCTTCTTTCTCTCCGATTCTCAACTCGAGACGATCTGCAGAGGTTCAACTCTTTTGGATTTTGGTGATGGCTTCGAAGCGGATCTTGAAAGAGCTCAAGGATCTCCAGAAGGATCCTCCTACGTCTTGCAGTGCAGGTTTTTTCTTCTTTAGAACTTTTTCCTGCCTGATTTGCACTGGAGGATTGAAAGAATTGAAAATCTATTTGTTTGATTTGTTTTTTTGTTTTTTTTTTTTTTTGGTGGAAAACTGGAAGGAGTTCTTTTCGGTGTTTTTGATCTTCCTTCTGATTGTTGTTTTGTGGTTTCTAGCACGAGTGAGCTAGGCTAGCCTGTGTTATTGCACTTCTTTAGGCTTTAGACATGTTAAACCTTGAGAAGACGGTAATTGAGAGTTCTAATCTTTGGCTCTGAATGTTGTGGTCGTAAAACTGCTGTATCTGCTACAGGATCCTAGTGAAACGCTAATTAGTACTAGCTTGTGATTCTTGTGCATGTTTGCAATTGTGCTGAGCACAAATCTGTCAGTTTGGCATCGTATTTGTAATGCATATTCTTGTTGAACTTGTTACCAGTTTCCCTGTATATTCTTAAAGGTCTAAAAAATAAATATGTTTCGATTCCTGATCTTTATTTCAAGAATAATACCAAACAGAGAGAAGAAAGAAAGAGTGAGAGAGGAATTCTTGTGTATTTCATTGCCAAGTATAATCGCATTAGTACTAGAGTATTTATAGGCAAAATAACTCTCCAACTGATACAACTAATCCTCTCTCTAACTGATATGCACACGTCAAACAGAATTTCAAAAACAGAATATTAAAAACAAGTAAATCTTTTAAGCTCAATGAGCTGTCTTCACTCCTAATTCTTACTTCGTTTTAGTCTATAAACTCTAAAGTGTTCTGTTTATATCCTTCAAGTCTTAAGTTGATTTTTTATTTAACCTAAATCTTTTTGAAATCTAACACTTGATCCACCATTTGTAGTTTCAAATACTTTTCTATGTAAATATTTACTCATCAAGTGAATGAACAAAGCATGCATCTTTGATAGGTTCGTGTTAGATAACAAAAATGATGCAAGTAAAGCAGAAAGACTAAAATAGAAGGTTTTAAATACAAATAAGTATGAAAGTTTAGGACATTTACATGTTAAGAATGGAAACCAAAAGAAACCGCCCCAGAAAATACTCAAGATAATTCGAGCTTTATGTTATCAAATGTTTATTTAGCCTTGATTTTGACCATATGACTTCCAAGTCGTGATATATCTGCAACCAGAAGATCTCAGTGGTTAAATTTGCTCATAAAGGATTCTCCATCCAACTTTTTTGTATCATAATTTTCAAATTAATTATAATTCTTCCTTTTTAATCAACCTCCAATTACTGAGGGAATAAGAACCAATTTAGTCTTACTAATAAATTTATAGTTCAATTCTATACACCACGATATTCTTTATAAGTTGATCTGTTAGTAAATTTTATGCTTCAACGTTTTCTTTCCTTGATGGATTTATATTGGGGACAATTTTGCCCCCATTTGATTATATTTTTTTTATTGTACCTCAGGTGACATAGCTAATGATGGTAGAATTATTATGTTCGCTTAATTTTAATGGTCTGTTCAATGAAAATCTTTAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCTCCTGACAGTCCATATGCAGGAGGAGTGTTTCTTGTGAACATTCATTTCCCTCCAGATTATCCATTTAAACCACCCAAGGTACATAGAATTGATTTGCTCCATTTACATGATAACTTTTATCTTTCACTTCTGTATGCCTCAGTTTTTTTTGACAGGGAAAGAAAATTTTAATTAAGATAATGAAAAGTTACAAGGTACAAAACTCCTTTAGGAAGATTACATAGATCTCCTACCCAACTGAAAACTGCAAGAAAACCGAAAAACTTGATTTAAAATCCTGTCAAGAGAGATTACAAAACTTAACCCCACAAAAGGAACTTGTTAAAAGATTTTCCCGACAGAACTCTTAAAGAAACCTCTTAGAAGAATTAAAATCTGCTTTGAGATCAAAATAAAAAGATTTTTATTTTATTTTATTTTATTTTATTTTATTTTTTATTTTTTATTTTTTATTTTTATAATAAACATCCAAAACAAAAAGAATTTTAAGAGCTTCCCTCTAAGAAACTAAAAGTTCTAATTCTAATTGTCTGCATCCTTTAACGTCTTATCTCCCTTTGGCTTTCTTATTCTTTTAACTAGGAATTGATGATAAAATAACCTCTGGTTTCTTCAAATAATCTAAAAGACCAACCTACGAAGAACTTTTTTTGATGAGAACCTACGAAGAAACAAGGAGGCTTCGTTCTTCTTTTCACTTGGATTATGAAGAATCAAGGAGGCTTCCTTCTTGTTTTCACTTGGATTTGGTGCTAAAATAACCTCAGGTTTCTTCAAATAATTTTAGAGACCAGCCCACGAGTATCCCTTGACTGCTGATTGAAAATGAACTCCACCAAATTCAGAAGGGGAGAAAAATCCACGCTTTCCTTTGCATAATCCTCACAATTAGCAGCCTCTTTTGCAGAGGAATTGCCAAGTCCTCAGTTTGGAATAAAAATACGAGCTTTTCATTAATGCTAAAAACTTCCTCATTCTTTTCCTCTTCTGTCTCTACAGAAATCACCTCCTCAACTAAGAATTCCCTAATACTCATCTTTGCTTCGATATATTCGAACTTAATTTGTTTGATCTTTAAGACATGAAATGGCAACCATTTACATCCTTAGGTGTTTCATTGAAATTTCTTACAGTGCCATTTCGCAGAAATCTTTGCTGTTTACCCAATAGAGCTTCACCATGTATTTAAAATCAAGAAGAAAGAAAAGAAAAAAGAGAGTTTGTCATTGAATGAAACCCGATAAGTCAGCAAACAAGTAAATTATTGAACAAGCTTGCCTTGCAACCAGAGATTAATTTATGTGAGCAATCAGTTTTCAGTCTTTTACTGTAAATGCTTTGGGGGGTGGGAGAGAAAGGTTTGAGAAATACGAAAATAATAATATTATAATTTTTTTTTTTGAGAAATACTAAAATAATAATGATTATAAAAAAAATTATGTGGAATAAAATTATATTATAAGTGAGTGATATGAGAGATACCTACTTTTGGGAAGACAAGTGGTTGGGGGATAGACCCTTCTGCTTCATGTTCATTTGTTTATACCATTTTCCCTCTAAGAGGAATCATTTAGTGGTCTCCTTTCTTTCTTGCTCTTCAATTTGGTCGTCTGTTGATTGATAGAGAAGCAATAGGGAAACAACAGACATTGTTAACCTTCTTTCCTTCCTTTTTTGGGTGTTTGTTCTACTCCTCTCCCTCTAGTCGTTCAATCTTTTCCTGTGGAGGTGAAAATTTCCTACAAGGTGAAAATTTTGGTTTGACAGGTCTTCCATGGTAGTATTAATACATTGGACCATGTTTCAACTGGTTTGATTGAGCACAGTGTTGCATCCTTTATAGGGGCGGTTGAGGATTTGGACCACCTTTCTGAGAGTTGTGCTTTTTTCGCTTTGATTTGGGATCATTTTTTCGACCAGTTTGGTTTTTCAGTTGTGCGACCAAGATATATCTCTATTCGATGGTTGAGGAGTTCCTTTTCCATCTTTCCTTTCATCAAAAGGGTTTGTTTTTGTGGCTTGCAGGGTGTGTGTGATCCTTTGGAGACTCCGAATGGGGAGGAACAATAGAATTTTTGCGGGGTTGAGAGGTCTAAAGAGGATGTGGGGACATTTATTAGGTTCCATGTCTCTCTAGGGGCCTCAGTTTTTGAGGATTTTTGTAATTATTCTTTAGGTCTTATCCGTCAAACACTCCTTTACCAAGGCTTTTTACCAAGGAGTTTGCTCTTATCCAGGTCAATGCCTGCCCAATAGAGCCTAACCACGAATCTCCACCAAGATTATATTTTCAAAGCACACAAATTCTTTGTTCAGCACTCGAGGAATTTAACGAAATGGCTATGTCAGGGGCATGGCTCTGATACCACTTGTAAAGGACAAGGACACTACACAAATCTCCTTGGTAATAGAGATACTTGTCCTCTCTTATAAACCCATGATCATCCCCTTTTTTAGCCAATGTGGGACTTTGGTTGCACTCTCTAATTCCCTACAGTTTCATATATATAATCTGCACTTTTAAAGATGATCATTTACTAAATAAATAGATGCGAATGAGTTAAAATTGATATTACATAGATTAATGTCATTTGTAGCTGTATGTTGGGTCCTCATTAAAGGGTACTCCTAGAGTAGAATTCTTGCAACTAGGGTTCATAGATATGGAGACTTACGTCCCTTCCCTGTCTTAGTGGCTGATATTCATGGGAGGTTAATCGACAAACAAGTCCAAAATGAAGGAGTCCCAAAAGTAGGGAGAGCTGGAGAGATCAAGTTTTGGTCCGTTAATTCACAGATGGCACAATTATTTTTGCTTCAGAAAAGATGGAAATCTGGAGAACTTATCAAAATCCTTCCTGTTTTTGAGGTGGCTTCTGGCTTAAATGTAACACGGCATCTTCCACTAGGTTGA

mRNA sequence

ATGGCTTCGAAGCGGATCTTGAAAGAGCTCAAGGATCTCCAGAAGGATCCTCCTACGTCTTGCAGTGCAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCTCCTGACAGTCCATATGCAGGAGGAGTGTTTCTTGTGAACATTCATTTCCCTCCAGATTATCCATTTAAACCACCCAAGGTCTTCCATGGTAGTATTAATACATTGGACCATGTTTCAACTGGTTTGATTGAGCACAGTGTTGCATCCTTTATAGGGGCGGTTGAGGATTTGGACCACCTTTCTGAGAGTTGTGCTTTTTTCGCTTTGATTTGGGATCATTTTTTCGACCAGTCTTATCCGTCAAACACTCCTTTACCAAGGCTTTTTACCAAGGAGTTTGCTCTTATCCAGCACTCGAGGAATTTAACGAAATGGCTATGTCAGGGGCATGGCTCTGATACCACTTGTAAAGGACAAGGACACTACACAAATCTCCTTGTGGCTGATATTCATGGGAGGTTAATCGACAAACAAGTCCAAAATGAAGGAGTCCCAAAAGTAGGGAGAGCTGGAGAGATCAAGTTTTGGTCCGTTAATTCACAGATGGCACAATTATTTTTGCTTCAGAAAAGATGGAAATCTGGAGAACTTATCAAAATCCTTCCTGTTTTTGAGGTGGCTTCTGGCTTAAATGTAACACGGCATCTTCCACTAGGTTGA

Coding sequence (CDS)

ATGGCTTCGAAGCGGATCTTGAAAGAGCTCAAGGATCTCCAGAAGGATCCTCCTACGTCTTGCAGTGCAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCTCCTGACAGTCCATATGCAGGAGGAGTGTTTCTTGTGAACATTCATTTCCCTCCAGATTATCCATTTAAACCACCCAAGGTCTTCCATGGTAGTATTAATACATTGGACCATGTTTCAACTGGTTTGATTGAGCACAGTGTTGCATCCTTTATAGGGGCGGTTGAGGATTTGGACCACCTTTCTGAGAGTTGTGCTTTTTTCGCTTTGATTTGGGATCATTTTTTCGACCAGTCTTATCCGTCAAACACTCCTTTACCAAGGCTTTTTACCAAGGAGTTTGCTCTTATCCAGCACTCGAGGAATTTAACGAAATGGCTATGTCAGGGGCATGGCTCTGATACCACTTGTAAAGGACAAGGACACTACACAAATCTCCTTGTGGCTGATATTCATGGGAGGTTAATCGACAAACAAGTCCAAAATGAAGGAGTCCCAAAAGTAGGGAGAGCTGGAGAGATCAAGTTTTGGTCCGTTAATTCACAGATGGCACAATTATTTTTGCTTCAGAAAAGATGGAAATCTGGAGAACTTATCAAAATCCTTCCTGTTTTTGAGGTGGCTTCTGGCTTAAATGTAACACGGCATCTTCCACTAGGTTGA

Protein sequence

MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVFHGSINTLDHVSTGLIEHSVASFIGAVEDLDHLSESCAFFALIWDHFFDQSYPSNTPLPRLFTKEFALIQHSRNLTKWLCQGHGSDTTCKGQGHYTNLLVADIHGRLIDKQVQNEGVPKVGRAGEIKFWSVNSQMAQLFLLQKRWKSGELIKILPVFEVASGLNVTRHLPLG
Homology
[Close]
BLAST of Spg029318 vs. NCBI nr
Match: AES82755.1 (ubiquitin-conjugating enzyme E2 [Medicago truncatula])

HSP 1 Score: 151.8 bits (382), Expect = 7.7e-33
Identity = 82/143 (57.34%), Postives = 95/143 (66.43%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPP------KVFHGSINTLDHVSTGLIEHSVASFIGAVEDLDHLSESCAFFALIWDHF 120
           PFKPP      KVFH +IN+   +   +++   +  +   + L  L+    FF       
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLPLLNSLTQFF------- 120

Query: 121 FDQSYPSNTPLPRLFTKEFALIQ 138
                 SNTPL  +  + FA+ Q
Sbjct: 121 ------SNTPL--VLKRNFAVQQ 128

[Close]
BLAST of Spg029318 vs. NCBI nr
Match: ONM12406.1 (Ubiquitin-conjugating enzyme E2 11 [Zea mays])

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-32
Identity = 68/74 (91.89%), Postives = 71/74 (95.95%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQATIMGP DSP+AGGVFLVNIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDY 60

Query: 61 PFKPPKVFHGSINT 75
          PFKPPKVFH +IN+
Sbjct: 61 PFKPPKVFHPNINS 74

[Close]
BLAST of Spg029318 vs. NCBI nr
Match: XP_023550211.1 (ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-32
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY
Sbjct: 43  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 102

Query: 61  PFKPP------KVFHGSINT 75
           PFKPP      KVFH +IN+
Sbjct: 103 PFKPPKVAFRTKVFHPNINS 122

[Close]
BLAST of Spg029318 vs. NCBI nr
Match: KAG6606055.1 (putative inactive receptor kinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-32
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY
Sbjct: 647 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 706

Query: 61  PFKPP------KVFHGSINT 75
           PFKPP      KVFH +IN+
Sbjct: 707 PFKPPKVAFRTKVFHPNINS 726

[Close]
BLAST of Spg029318 vs. NCBI nr
Match: XP_011654707.1 (ubiquitin-conjugating enzyme E2-17 kDa [Cucumis sativus] >XP_016898870.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo] >XP_022145923.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Momordica charantia] >XP_022929120.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita moschata] >XP_022958452.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita moschata] >XP_022970116.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita maxima] >XP_022995855.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita maxima] >XP_023533920.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita pepo subsp. pepo] >XP_023533922.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita pepo subsp. pepo] >XP_038874840.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Benincasa hispida] >KAG7036002.1 hypothetical protein SDJN02_02802 [Cucurbita argyrosperma subsp. argyrosperma] >KGN50038.1 hypothetical protein Csa_000355 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-32
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH +IN+
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80

[Close]
BLAST of Spg029318 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.3e-34
Identity = 69/80 (86.25%), Postives = 72/80 (90.00%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH +IN+
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80

[Close]
BLAST of Spg029318 vs. ExPASy Swiss-Prot
Match: Q8S919 (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-33
Identity = 68/80 (85.00%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQAT+MGP DSPYAGGVFLV IHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH +IN+
Sbjct: 61 PFKPPKVALKTKVFHPNINS 80

[Close]
BLAST of Spg029318 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.1e-33
Identity = 68/80 (85.00%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH +IN+
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80

[Close]
BLAST of Spg029318 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.8e-33
Identity = 68/80 (85.00%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLV IHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH +IN+
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80

[Close]
BLAST of Spg029318 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.8e-33
Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH ++N+
Sbjct: 61 PFKPPKVAFRTKVFHPNVNS 80

[Close]
BLAST of Spg029318 vs. ExPASy TrEMBL
Match: G7L405 (Ubiquitin-conjugating enzyme E2 OS=Medicago truncatula OX=3880 GN=11432845 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 3.7e-33
Identity = 82/143 (57.34%), Postives = 95/143 (66.43%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPP------KVFHGSINTLDHVSTGLIEHSVASFIGAVEDLDHLSESCAFFALIWDHF 120
           PFKPP      KVFH +IN+   +   +++   +  +   + L  L+    FF       
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLPLLNSLTQFF------- 120

Query: 121 FDQSYPSNTPLPRLFTKEFALIQ 138
                 SNTPL  +  + FA+ Q
Sbjct: 121 ------SNTPL--VLKRNFAVQQ 128

[Close]
BLAST of Spg029318 vs. ExPASy TrEMBL
Match: A0A096RLQ7 (Ubiquitin-conjugating enzyme E2 11 OS=Zea mays OX=4577 GN=100281830 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 6.4e-33
Identity = 68/74 (91.89%), Postives = 71/74 (95.95%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQATIMGP DSP+AGGVFLVNIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDY 60

Query: 61 PFKPPKVFHGSINT 75
          PFKPPKVFH +IN+
Sbjct: 61 PFKPPKVFHPNINS 74

[Close]
BLAST of Spg029318 vs. ExPASy TrEMBL
Match: A0A6J1K529 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111491260 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 8.3e-33
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH +IN+
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80

[Close]
BLAST of Spg029318 vs. ExPASy TrEMBL
Match: A0A6J1H1V5 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111459671 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 8.3e-33
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH +IN+
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80

[Close]
BLAST of Spg029318 vs. ExPASy TrEMBL
Match: A0A5A7TH72 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002050 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 8.3e-33
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH +IN+
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80

[Close]
BLAST of Spg029318 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-34
Identity = 68/80 (85.00%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH +IN+
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80

[Close]
BLAST of Spg029318 vs. TAIR 10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-34
Identity = 68/80 (85.00%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  PFKPP------KVFHGSINT 75
           PFKPP      KVFH +IN+
Sbjct: 91  PFKPPKVAFRTKVFHPNINS 110

[Close]
BLAST of Spg029318 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-34
Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH ++N+
Sbjct: 61 PFKPPKVAFRTKVFHPNVNS 80

[Close]
BLAST of Spg029318 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-34
Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH ++N+
Sbjct: 61 PFKPPKVAFRTKVFHPNVNS 80

[Close]
BLAST of Spg029318 vs. TAIR 10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-34
Identity = 68/80 (85.00%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLV IHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPP------KVFHGSINT 75
          PFKPP      KVFH +IN+
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80

The following BLAST results are available for this feature:
BLAST of Spg029318 vs. NCBI nr
Match NameE-valueIdentityDescription
AES82755.17.7e-3357.34ubiquitin-conjugating enzyme E2 [Medicago truncatula][more]
ONM12406.11.3e-3291.89Ubiquitin-conjugating enzyme E2 11 [Zea mays][more]
XP_023550211.11.7e-3288.75ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita pepo subsp. pepo][more]
KAG6606055.11.7e-3288.75putative inactive receptor kinase, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_011654707.11.7e-3288.75ubiquitin-conjugating enzyme E2-17 kDa [Cucumis sativus] >XP_016898870.1 PREDICT... [more]
BLAST of Spg029318 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P351357.3e-3486.25Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
Q8S9191.6e-3385.00Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=U... [more]
P351322.1e-3385.00SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1[more]
P351332.8e-3385.00Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1... [more]
Q94F472.8e-3383.75Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1... [more]
BLAST of Spg029318 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
G7L4053.7e-3357.34Ubiquitin-conjugating enzyme E2 OS=Medicago truncatula OX=3880 GN=11432845 PE=3 ... [more]
A0A096RLQ76.4e-3391.89Ubiquitin-conjugating enzyme E2 11 OS=Zea mays OX=4577 GN=100281830 PE=3 SV=1[more]
A0A6J1K5298.3e-3388.75ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1H1V58.3e-3388.75ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A5A7TH728.3e-3388.75Ubiquitin-conjugating enzyme E2-17 kDa OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
BLAST of Spg029318 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G27960.11.5e-3485.00ubiquitin conjugating enzyme 9 [more]
AT4G27960.21.5e-3485.00ubiquitin conjugating enzyme 9 [more]
AT1G64230.12.0e-3483.75ubiquitin-conjugating enzyme 28 [more]
AT1G64230.22.0e-3483.75ubiquitin-conjugating enzyme 28 [more]
AT5G53300.12.0e-3485.00ubiquitin-conjugating enzyme 10 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 4..135
e-value: 4.5E-14
score: 62.8
NoneNo IPR availablePANTHERPTHR24068:SF346BNAA01G32320D PROTEINcoord: 3..67
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 3..67
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 5..67
e-value: 3.1E-19
score: 69.0
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 1..151
score: 24.210224
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 3..74
e-value: 3.65506E-35
score: 120.385
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..89
e-value: 9.0E-30
score: 105.3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg029318.1Spg029318.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0061631 ubiquitin conjugating enzyme activity