Spg029244 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCCATGTTCAGTTTGTTCGATGCCTTCGCCGCCGAATTCCTCCTCGGCAACTTCGTTAGGGCTTCTTCCTCTGTCCCTTCCTTCACTCCCAACAACACCGGCTCTGCCTCTTCCGCCTCCGTCGTGAAGTCGCCGCCGATCAACAAGGAAGAACCTAAGTCCAACAATTCCTCGATCAGGCCCAGATTTGCTCCCGAGTTCGATGGCCTCAATTGCTTCGAGACTCTCGTCCCCAATTGA ATGAATTCCATGTTCAGTTTGTTCGATGCCTTCGCCGCCGAATTCCTCCTCGGCAACTTCGTTAGGGCTTCTTCCTCTGTCCCTTCCTTCACTCCCAACAACACCGGCTCTGCCTCTTCCGCCTCCGTCGTGAAGTCGCCGCCGATCAACAAGGAAGAACCTAAGTCCAACAATTCCTCGATCAGGCCCAGATTTGCTCCCGAGTTCGATGGCCTCAATTGCTTCGAGACTCTCGTCCCCAATTGA ATGAATTCCATGTTCAGTTTGTTCGATGCCTTCGCCGCCGAATTCCTCCTCGGCAACTTCGTTAGGGCTTCTTCCTCTGTCCCTTCCTTCACTCCCAACAACACCGGCTCTGCCTCTTCCGCCTCCGTCGTGAAGTCGCCGCCGATCAACAAGGAAGAACCTAAGTCCAACAATTCCTCGATCAGGCCCAGATTTGCTCCCGAGTTCGATGGCCTCAATTGCTTCGAGACTCTCGTCCCCAATTGA MNSMFSLFDAFAAEFLLGNFVRASSSVPSFTPNNTGSASSASVVKSPPINKEEPKSNNSSIRPRFAPEFDGLNCFETLVPN Homology
BLAST of Spg029244 vs. NCBI nr
Match: XP_011654674.1 (uncharacterized protein LOC105435432 [Cucumis sativus]) HSP 1 Score: 112.5 bits (280), Expect = 1.8e-21 Identity = 62/81 (76.54%), Postives = 66/81 (81.48%), Query Frame = 0
BLAST of Spg029244 vs. NCBI nr
Match: KAA0042638.1 (uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa] >TYK06039.1 uncharacterized protein E5676_scaffold376G001400 [Cucumis melo var. makuwa]) HSP 1 Score: 111.7 bits (278), Expect = 3.0e-21 Identity = 61/84 (72.62%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of Spg029244 vs. NCBI nr
Match: XP_023522684.1 (uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 101.7 bits (252), Expect = 3.1e-18 Identity = 58/86 (67.44%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of Spg029244 vs. NCBI nr
Match: KAG6579594.1 (hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 101.3 bits (251), Expect = 4.1e-18 Identity = 59/86 (68.60%), Postives = 64/86 (74.42%), Query Frame = 0
BLAST of Spg029244 vs. NCBI nr
Match: XP_022929066.1 (uncharacterized protein LOC111435766 [Cucurbita moschata] >KAG7017054.1 hypothetical protein SDJN02_22166, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 101.3 bits (251), Expect = 4.1e-18 Identity = 59/86 (68.60%), Postives = 64/86 (74.42%), Query Frame = 0
BLAST of Spg029244 vs. ExPASy TrEMBL
Match: A0A0A0KJT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146930 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 8.5e-22 Identity = 62/81 (76.54%), Postives = 66/81 (81.48%), Query Frame = 0
BLAST of Spg029244 vs. ExPASy TrEMBL
Match: A0A5D3C6N3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001400 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21 Identity = 61/84 (72.62%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of Spg029244 vs. ExPASy TrEMBL
Match: A0A6J1EM23 (uncharacterized protein LOC111435766 OS=Cucurbita moschata OX=3662 GN=LOC111435766 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.0e-18 Identity = 59/86 (68.60%), Postives = 64/86 (74.42%), Query Frame = 0
BLAST of Spg029244 vs. ExPASy TrEMBL
Match: A0A6J1E0L6 (uncharacterized protein LOC111026066 OS=Momordica charantia OX=3673 GN=LOC111026066 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 9.4e-13 Identity = 55/86 (63.95%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of Spg029244 vs. ExPASy TrEMBL
Match: A0A5C7H1W0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_023293 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07 Identity = 45/86 (52.33%), Postives = 52/86 (60.47%), Query Frame = 0
BLAST of Spg029244 vs. TAIR 10
Match: AT1G32928.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 3.4e-07 Identity = 38/83 (45.78%), Postives = 48/83 (57.83%), Query Frame = 0
BLAST of Spg029244 vs. TAIR 10
Match: AT5G54165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 2.5e-05 Identity = 29/81 (35.80%), Postives = 43/81 (53.09%), Query Frame = 0
BLAST of Spg029244 vs. TAIR 10
Match: AT1G32920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32928.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 4.2e-05 Identity = 36/86 (41.86%), Postives = 48/86 (55.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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