Spg029130 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg029130
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Locationscaffold11: 23048061 .. 23052791 (+)
RNA-Seq ExpressionSpg029130
SyntenySpg029130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCAGCGCCATCTAATGAGCAGCTGAATGCGGCTGTTAGGGAATTAGGAATAGAAGGGGCCCAATGGAGGTTGTCGAAGACGGAGAAGCGAACTTTTCAAGTTGCTTATTTGAAGAGTGAAGCAAACACATGGTTGGGCTTTGTTAAGTTGCGTCTTCTACCGACATCCCACGACTCCACTGTCTCCTGTGATCTCGTTCTCCTGGTTTTTGCAATTCTGAGGTCATTAAGCATTGATGTCAGAAAAATTATTTCCAGTGAGATTCACACTTGCTGGAGGAAAAAGATGGGCAAGCTTTTCTTTCCAAACACAATAACTATGTTGTGTCGAAGAGTTGGGGTTCCCGCGAGTCCTGAAGATGTTATCCTGATAGACAAGGGAATAATAGACACGCCAAACTGGCAAGGCTTCAGCGGACTCAAGAAGCACGCTAAGGCGGTTTGGTGTTTGGCATCCACCAAATACAAGAACAACTGCAAATGCATTCCAGCCGAATGAAGTTTGCCATGAGGCAATTTCAAACATAATGGAATTATGTTAAACGGAGGGATGCCACACTTAGGAGGGCTTTGCAATCCAACTTTTCCAAGCCATATCAAGCCTTCCCTGTTTGTCCCGATGATCTATTGAACCCTTGGATCCCACAGCCGCCGATAGAAAGAGAAGGAGAAGAGGATGAAGATGTTGGTCAGGAGGACTAGAAGAAGAAAAAAAGAACTGAGCGAGCTTTTATTTTGTTTAATCATTTTTGTTGCTCGCGTATTTTTCTGACCAAGTTTTTTTTTCTTTTTTTAGGATTTCTGCTTTCATGTTTTTATTTTCTTTTCTGCTGGCCTTTCAAAATTTTTATCTGATATTGTAATCATTTTTCTGTTATTTTAATGAAATTTCTAAAGTTTTTCTTTTCTATGGCACACCTGAGTATTCCTAACTTAACCTTTTCTTCTGAATTTTTGAAGCTTGGACTAGTTAGCTTAATTAGATCAAGGTGTTCTGATCTCCAGAAACCTTTTGCTTGAGCATTTCTTCTACCCTAGTCGTCGCTGCGGCAAGAAGTTCTGAGGTAGCATTGTCTTATTTTGATCCACCTTAAGCTTAGTCTTAGTCCCACGCTTAGTTTAAAATTAAGATAGAAAAAAATTAAGTTTGGGGGAATAATTATATGTTCCTAATTCATTGAGGACAATGAATAATTTAAGTTTGGGAGACTTTTAGCTTCTCCGCTTGTTTTGCCTGAGCATTCCTCTCCTTCATAATAATTTTTCTAGGTTGTTGAGTAACCAGGGACATTTGTGACACCCACAGTTTGTCTTTGCATCAAAAGATGGCCTAGGGAATATTGAAAAATGATGAAAAAAAATTATATGTTGAAAAAAGAAAAGTGAAATTTTTTTGCTGTGAAAATTGATAGAGCAAAACTTTTGAAGGATGAATGATAATCTGGCAGTTTTCTATCTCCTATGTCTTAGGTGAGCTTCATCATAACATATCGCCATTCTGAGAAGCAAGGGATATATAACTAAAGATTTTTGGGTTTAGCAATGAGTGTTTAGCCTAGTTGGTGATAAGCTTGAAGCAAGGGTATACTGCATCATAAAATGGGTCATCTCATGCTTAAGAGCTTATGACTGTAAGGCTGGTTTAAATCTGAAGAACGAAAAAATAAATCCCCTAAAAAAATGTGTTAAAATGTGTCTAATAATATAGCTGAGCTGTGGTAAGTTCTTAGGATTGAGTTAAAGGTGGTGATTATTTGTTCAATGTTGAAAGAATTGTTTTGCTGCAGCAATGCATGGTTTTGCAGGATGCTCAGGTAAAGGTTGAAGGTAGTGTTGGATTATCTGTTTAATTGAGTTGTGCTATGATCAATGTTTTGAATTTTCAAGTGAAGGTGAGTTAGTTTTGCTCGGGACGCGCAATAGTTCAAGTTTGAGGGTATGATAACTCTCCAAAAAGGAGTTATTTAGGCCTTATTCTATGATGATTATATGTCATTTGGGTCAAATAGGCGTGATATTAAATGAATATTATGTGTTTTATCCTATTTATTAGAATTTATGCTTTGGAAGTTATTTTGCAGAATAAATAATACTGAGCGACTTGAGGGAGCAAATTCCATGATCCAGCAAAGCACAGAGTAAAACTGGCCACGTGAATTGGACGTGATTCATTAATGAGGTGGCGTTTTCAGAAACAATCTCGAATCTAGGAAGCTTTGAGAGCCTTCCACGTGTAATATTTGACCTAATTAGGGTTGACTCCACTCTATAAAAGGAAAGAGTCGTCTCAAGTCAAATCATTCTGAGTTGGAGACTTACTTTCCATCTTTGGAAGTCGAATAGAGGAGGAACAATTGGAGACTCAAGAATACCATCAACTACGGATTTCTTCAAGGGAATTTATCTTTTCTTATAAAATTTTGTAGTTATGGATGCACGTGAACAGATTGTAGTGTGTGTTATTTTCCATTCCATGAACTAATTTACTTTAGGTGTTGGTTACGATTATGTAATTGTCATTTCTTAATAATCTAGCAATTGATATTGATTTCGAGCATCTTGATTACTTGTTGTGTTTATTCTTATTTTATGCCCACCTGGCCAGCCGGTGTGAATACCTTCTCTTAGTTTCAGGGATGATTTAAGGGGTGTGTGGCATGTAATCACACTAAACCATTATGTGTTGGTGAACGCTAGTGACTAAGTTAGGGATAGCAAGTTGCCTAGTGCTCGATCGGTAGAGCGTCATTGGAGTTGAAACACATTCCAAAAGATTGAGAGTTCTGGAAGGATCCGGCTGATAAGATTGCGAGAGTTTGCCTTATCAATATAATTGCTAGAGCATCTTTTTAAAATTACAGAAGTCTTAACCAACGCCTGTCTCCAATCTGTCTTCTTTATCCGTTTACATTTCTGCTCTGTCATTTCTTTTGCTACAGCATTATTTCAAAACCTAATCGTTTAAACAATCTTGAAATCACTAAAAGGTTACACAAAATAGATAAAGTGGAAGTTATTCAAGACCTCGTGGATACGATAAATTACTTATCACTTGTTGCAGACTATGTGCACTTGCATAGTATTCTAGAGATAATTATTATCATATTTTTAACCCACTTTGGAAATACAACAAGTTACCTAGGTCATCCTATTGGAACAGTAACCTAACTAGTTAACGGTGTTATATCTAGTGGTTTACTATTTCATGGTCCAATCTTATGCAAACTCATTGCATAGGATACCCTCGCTTGCATGTCTACTACATGGACACTTTGGATCAATACGTATGTATCAAATACAAAGCGGGTCGTATCACGTAGTGTTACCAGGATAAGGTACCCAACCTTATCCTTGTACTATAGACCTTTTAGGTTGTTACTTGAACATCGATCCCCATATGTCCCCACATACTAGTTCAAGTTACATAGAAACAACCTTAGATCTTAGTTTATTGGATTTGGGTCAAATTGTGCAATATTTAAGAATAACACTTTGTTCTAGAAACTTAATAACACTTTATTGAAACAACTATACAATTTGTTTACATTCACTATCTACGAGTTTTAGGGCATAAAACCCAACACACCCATCAAGGCATTGATGTGCGCATAGCGATCTAACTACCATCTCACTGGTGAGGCATCCATGGGTTTTAAGTCGAAATTTAACTTCCACAGTTAGTAGATGGCACCTAATCTGCGAAGTCGAGTCCCGCCCATTTAGCTCCTCATTTCAATCTAAAACATCTCAGTCCTAGGTGATTAATTGTCACGACCCCTACTAGAATAACTAGCCTATTCTTTTCCCTTTCTTACTCTTTTTCCTTTTAAGGCCTCCTAGCACGCAAGCTAATTTTAACAGCAACCTAACCGATAAAATCCTTTCTCTCAAAGACCACTGTCGGGCTAGACCGACATGTACCACCCCAACTCAGTCAACTACAGAAACAAGAACGTCAAACAACACTCCTAAACAGAGAAACCACAAATTTCCCGTCGTCTACATACAACGCCAGCCAACTGTAATATACCAAAAACATGCACTCACATCTATCTCATAACACAAAAAAAATTACTGCAGCCAAACTCTCGAAAACAACAGCATTAATATTTACTCAGGTCATTTCAGTCTTAACTCATACATAGCAATTTCATATGTCGGAAGCACAATTGTCATACCAATGCATAAATACATATTAATTCAGCAAGTTATCTTACCTTAATAATTTAGTACAGAATAACACGGCTTGGCCCACAAGTTTTCCTAGCCACTAATAATCCCTAATAATTTAATAAAAATTAGGTCCTAATACAGTATCGCCAAAAACAAATTTACCGAAGCTTAAAGCCGATTGAATCTCTTAGCCAATCAATTCCTTAGAACTAAAGCTAGAAATTTTGACAACGGCGATGTCGATTCACAGCGGCAGCGGCGAAGCTGAGAGACAGCAGCGACGAATCTGAGGCGGGGCAGCACTGGGGTTGTTCGCGACGACAGCGACGGGTCTGAGGCCGCGGTGGACGATTTTGCTACAGACAGTGGCGGGGGCGACGACTATGTAAGGAGAGGCGGCGGTGGCTCGTGGTTGCTGCAATCGAGAGAGAGAGAGCGAGACCCATTAGAGAGAGAAACCGAGAGCTTGAGGAAAGAGAGAGAGAAGGAGAGTTATCTTACCGGAAGGCACGACAACGGCGTCGAGAGGAGACCGAGGGCGATGGTGGTCTGA

mRNA sequence

ATGGCGGCAGCGCCATCTAATGAGCAGCTGAATGCGGCTGTTAGGGAATTAGGAATAGAAGGGGCCCAATGGAGGTTGTCGAAGACGGAGAAGCGAACTTTTCAAGTTGCTTATTTGAAGAGTGAAGCAAACACATGGTTGGGCTTTGTTAAGTTGCGTCTTCTACCGACATCCCACGACTCCACTGTCTCCTGTGATCTCGTTCTCCTGGTTTTTGCAATTCTGAGGTCATTAAGCATTGATGTCAGAAAAATTATTTCCAGTGAGATTCACACTTGCTGGAGGAAAAAGATGGGCAAGCTTTTCTTTCCAAACACAATAACTATGTTGTGTCGAAGAGTTGGGGTTCCCGCGAGTCCTGAAGATGTTATCCTGATAGACAAGGGAATAATAGACACGCCAAACTGGCAAGGCTTCAGCGGACTCAAGAAGCACGCTAAGGCGGTTTGGAGGGCTTTGCAATCCAACTTTTCCAAGCCATATCAAGCCTTCCCTGTTTGTCCCGATGATCTATTGAACCCTTGGATCCCACAGCCGCCGATAGAAAGAGAAGGAGAAGAGGATGAAGATGTTGAAACCTTTTGCTTGAGCATTTCTTCTACCCTAGTCGTCGCTGCGGCAAGAAGTTCTGAGCAATGCATGGTTTTGCAGGATGCTCAGGATACCCTCGCTTGCATGTCTACTACATGGACACTTTGGATCAATACGTATGTATCAAATACAAAGCGGGTCGTATCACGTAGTGTTACCAGGATAAGCACTGGGGTTGTTCGCGACGACAGCGACGGGTCTGAGGCCGCGGTGGACGATTTTGCTACAGACAGTGGCGGGGGCGACGACTATGTAAGGAGAGGCGGCGGTGGCTCGTGGTTGCTGCAATCGAGAGAGAGAGAGCGAGACCCATTAGAGAGAGAAACCGAGAGCTTGAGGAAAGAGAGAGAGAAGGAGAGTTATCTTACCGGAAGGCACGACAACGGCGTCGAGAGGAGACCGAGGGCGATGGTGGTCTGA

Coding sequence (CDS)

ATGGCGGCAGCGCCATCTAATGAGCAGCTGAATGCGGCTGTTAGGGAATTAGGAATAGAAGGGGCCCAATGGAGGTTGTCGAAGACGGAGAAGCGAACTTTTCAAGTTGCTTATTTGAAGAGTGAAGCAAACACATGGTTGGGCTTTGTTAAGTTGCGTCTTCTACCGACATCCCACGACTCCACTGTCTCCTGTGATCTCGTTCTCCTGGTTTTTGCAATTCTGAGGTCATTAAGCATTGATGTCAGAAAAATTATTTCCAGTGAGATTCACACTTGCTGGAGGAAAAAGATGGGCAAGCTTTTCTTTCCAAACACAATAACTATGTTGTGTCGAAGAGTTGGGGTTCCCGCGAGTCCTGAAGATGTTATCCTGATAGACAAGGGAATAATAGACACGCCAAACTGGCAAGGCTTCAGCGGACTCAAGAAGCACGCTAAGGCGGTTTGGAGGGCTTTGCAATCCAACTTTTCCAAGCCATATCAAGCCTTCCCTGTTTGTCCCGATGATCTATTGAACCCTTGGATCCCACAGCCGCCGATAGAAAGAGAAGGAGAAGAGGATGAAGATGTTGAAACCTTTTGCTTGAGCATTTCTTCTACCCTAGTCGTCGCTGCGGCAAGAAGTTCTGAGCAATGCATGGTTTTGCAGGATGCTCAGGATACCCTCGCTTGCATGTCTACTACATGGACACTTTGGATCAATACGTATGTATCAAATACAAAGCGGGTCGTATCACGTAGTGTTACCAGGATAAGCACTGGGGTTGTTCGCGACGACAGCGACGGGTCTGAGGCCGCGGTGGACGATTTTGCTACAGACAGTGGCGGGGGCGACGACTATGTAAGGAGAGGCGGCGGTGGCTCGTGGTTGCTGCAATCGAGAGAGAGAGAGCGAGACCCATTAGAGAGAGAAACCGAGAGCTTGAGGAAAGAGAGAGAGAAGGAGAGTTATCTTACCGGAAGGCACGACAACGGCGTCGAGAGGAGACCGAGGGCGATGGTGGTCTGA

Protein sequence

MAAAPSNEQLNAAVRELGIEGAQWRLSKTEKRTFQVAYLKSEANTWLGFVKLRLLPTSHDSTVSCDLVLLVFAILRSLSIDVRKIISSEIHTCWRKKMGKLFFPNTITMLCRRVGVPASPEDVILIDKGIIDTPNWQGFSGLKKHAKAVWRALQSNFSKPYQAFPVCPDDLLNPWIPQPPIEREGEEDEDVETFCLSISSTLVVAAARSSEQCMVLQDAQDTLACMSTTWTLWINTYVSNTKRVVSRSVTRISTGVVRDDSDGSEAAVDDFATDSGGGDDYVRRGGGGSWLLQSRERERDPLERETESLRKEREKESYLTGRHDNGVERRPRAMVV
Homology
[Close]
BLAST of Spg029130 vs. NCBI nr
Match: XP_024971944.1 (uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus])

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-13
Identity = 42/126 (33.33%), Postives = 76/126 (60.32%), Query Frame = 0 

Query: 1   MAAAPSNEQLNAAVRELGIEGAQWRL-SKTEKRTFQVAYLKSEANTWLGFVKLRLLPTSH 60
           ++ + S  +L    RELG  G +W   S    RT++ + LK  AN W+ F++  L PT+H
Sbjct: 294 LSQSSSFAKLEEIGRELGKAGIRWDAHSNYMLRTYRASNLKPNANVWINFIRYSLNPTTH 353

Query: 61  DSTVSCDLVLLVFAILRSLSIDVRKIISSEIHTCWRKKMGKLFFPNTITMLCRRVGVPAS 120
           DS++S + ++L++ ++   +I+V K++   I  C +++ GKLFFP+ I  L  + GVP  
Sbjct: 354 DSSISVEKIILLYCVVTGRTINVGKVVEKAILYCSKRRQGKLFFPSLIHKLLMQAGVPEY 413

Query: 121 PEDVIL 126
            +D+++
Sbjct: 414 TDDLVI 419

[Close]
BLAST of Spg029130 vs. NCBI nr
Match: EXB53755.1 (hypothetical protein L484_022412 [Morus notabilis])

HSP 1 Score: 86.7 bits (213), Expect = 4.3e-13
Identity = 47/133 (35.34%), Postives = 75/133 (56.39%), Query Frame = 0 

Query: 2   AAAPSNEQLNAAVRELGIEGAQWRLSKTEKRTFQVAYLKSEANTWLGFVKLRLLPTSHDS 61
           A+  ++EQL   + E+ IEGA W++S     T     LK  A  W  F+  R +P++H  
Sbjct: 77  ASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYHFLTARFMPSTHGK 136

Query: 62  TVSCDLVLLVFAILRSLSIDVRKIISSEIHTC-WRKKMGKLFFPNTITMLCRRVGVPASP 121
           TV+ D VLL+++IL  +S+++ +I   EI  C   +K G L+FP+ IT L  +  VP   
Sbjct: 137 TVAKDRVLLLYSILTGISVNIEEITIKEIKACSAARKRGGLYFPSLITQLWLKANVPYHK 196

Query: 122 EDVILIDKGIIDT 134
           ++ I+ + G I T
Sbjct: 197 DEAIVHNAGAIST 209

[Close]
BLAST of Spg029130 vs. NCBI nr
Match: KAE8684537.1 (DNA-directed RNA polymerase V subunit 5C-like [Hibiscus syriacus])

HSP 1 Score: 86.7 bits (213), Expect = 4.3e-13
Identity = 59/190 (31.05%), Postives = 87/190 (45.79%), Query Frame = 0 

Query: 2    AAAPSNEQLNAAVRELGIEGAQWRLSKTEKRTFQVAYLKSEANTWLGFVKLRLLPTSHDS 61
            A    NE     + +L +   QW   +  ++T     L  +   W  F+K +LLPTSH++
Sbjct: 1361 AQEADNETYQGILEDLCLPDTQWNGQQLRRKTVDRDRLLPQVKLWNHFMKHKLLPTSHNT 1420

Query: 62   TVSCDLVLLVFAILRSLSIDVRKIISSEIHTCWRKKMGKLFFPNTITMLCRRVGVPASPE 121
            TVSC  +LL+ +I+    IDV KII  + H C +++   L FPN IT LCR+  V     
Sbjct: 1421 TVSCQRMLLLHSIISGRPIDVGKIIVEQAHLCLKRQASALVFPNLITALCRKKKVREEIF 1480

Query: 122  DVILIDKGIIDTPNWQGFSGLKKHAKAVWRALQSNFSKPYQAFPVCPDDLLNPWIPQPPI 181
            D IL   GI    N +    L  + +A   AL           P  PD+L+       P+
Sbjct: 1481 DEIL--PGIAGL-NKEKIPMLLGYKEAKGNALMEFLPHTNFTIPTFPDELV-------PL 1540

Query: 182  EREGEEDEDV 192
              + E   +V
Sbjct: 1541 NEDAEASAEV 1540

[Close]
BLAST of Spg029130 vs. NCBI nr
Match: KAE8705556.1 (Detected protein of unknown function [Hibiscus syriacus])

HSP 1 Score: 86.3 bits (212), Expect = 5.6e-13
Identity = 45/118 (38.14%), Postives = 64/118 (54.24%), Query Frame = 0 

Query: 7   NEQLNAAVRELGIEGAQWRLSKTEKRTFQVAYLKSEANTWLGFVKLRLLPTSHDSTVSCD 66
           NE  +  +  L +   QW   +   RT     L+  A  W  F+K +LLP SH++TVSC 
Sbjct: 166 NETYHGILENLCLSNIQWNGQQMSHRTVDRERLQPRAKLWNHFMKYKLLPNSHNTTVSCQ 225

Query: 67  LVLLVFAILRSLSIDVRKIISSEIHTCWRKKMGKLFFPNTITMLCRRVGVPASPEDVI 125
            +LL+ +I+   SID+ KII  ++HT  ++    L FPN IT LCR+  VP    D I
Sbjct: 226 RMLLLHSIIVGSSIDIGKIIVEQVHTYLKRHASALVFPNLITALCRKKKVPEEQFDEI 283

[Close]
BLAST of Spg029130 vs. NCBI nr
Match: TYH88163.1 (hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum])

HSP 1 Score: 84.7 bits (208), Expect = 1.6e-12
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 0 

Query: 21  GAQWRLSKTEKRTFQVAYLKSEANTWLGFVKLRLLPTSHDSTVSCDLVLLVFAILRSLSI 80
           G+QW + K    + +  YLK  AN W  FV+   +P SH  T+S + +LL++AIL   SI
Sbjct: 146 GSQWIIRKYGSHSCRREYLKPIANVWFYFVQYSFMPISHSYTISMERMLLLYAILTEKSI 205

Query: 81  DVRKIISSEIHTCWRKKMGKLFFPNTITMLCRRVGV 117
           +V KII  EIH C +KK G ++FP+ IT LC +  V
Sbjct: 206 NVGKIILKEIHNCAKKKAGSVYFPSLITSLCLKACV 241

[Close]
BLAST of Spg029130 vs. ExPASy TrEMBL
Match: A0A6A2YYY2 (DNA-directed RNA polymerase V subunit 5C-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111128pilonHSYRG00157 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.1e-13
Identity = 59/190 (31.05%), Postives = 87/190 (45.79%), Query Frame = 0 

Query: 2    AAAPSNEQLNAAVRELGIEGAQWRLSKTEKRTFQVAYLKSEANTWLGFVKLRLLPTSHDS 61
            A    NE     + +L +   QW   +  ++T     L  +   W  F+K +LLPTSH++
Sbjct: 1361 AQEADNETYQGILEDLCLPDTQWNGQQLRRKTVDRDRLLPQVKLWNHFMKHKLLPTSHNT 1420

Query: 62   TVSCDLVLLVFAILRSLSIDVRKIISSEIHTCWRKKMGKLFFPNTITMLCRRVGVPASPE 121
            TVSC  +LL+ +I+    IDV KII  + H C +++   L FPN IT LCR+  V     
Sbjct: 1421 TVSCQRMLLLHSIISGRPIDVGKIIVEQAHLCLKRQASALVFPNLITALCRKKKVREEIF 1480

Query: 122  DVILIDKGIIDTPNWQGFSGLKKHAKAVWRALQSNFSKPYQAFPVCPDDLLNPWIPQPPI 181
            D IL   GI    N +    L  + +A   AL           P  PD+L+       P+
Sbjct: 1481 DEIL--PGIAGL-NKEKIPMLLGYKEAKGNALMEFLPHTNFTIPTFPDELV-------PL 1540

Query: 182  EREGEEDEDV 192
              + E   +V
Sbjct: 1541 NEDAEASAEV 1540

[Close]
BLAST of Spg029130 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.1e-13
Identity = 47/133 (35.34%), Postives = 75/133 (56.39%), Query Frame = 0 

Query: 2   AAAPSNEQLNAAVRELGIEGAQWRLSKTEKRTFQVAYLKSEANTWLGFVKLRLLPTSHDS 61
           A+  ++EQL   + E+ IEGA W++S     T     LK  A  W  F+  R +P++H  
Sbjct: 77  ASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYHFLTARFMPSTHGK 136

Query: 62  TVSCDLVLLVFAILRSLSIDVRKIISSEIHTC-WRKKMGKLFFPNTITMLCRRVGVPASP 121
           TV+ D VLL+++IL  +S+++ +I   EI  C   +K G L+FP+ IT L  +  VP   
Sbjct: 137 TVAKDRVLLLYSILTGISVNIEEITIKEIKACSAARKRGGLYFPSLITQLWLKANVPYHK 196

Query: 122 EDVILIDKGIIDT 134
           ++ I+ + G I T
Sbjct: 197 DEAIVHNAGAIST 209

[Close]
BLAST of Spg029130 vs. ExPASy TrEMBL
Match: A0A6A3AN19 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110422pilonHSYRG00071 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-13
Identity = 45/118 (38.14%), Postives = 64/118 (54.24%), Query Frame = 0 

Query: 7   NEQLNAAVRELGIEGAQWRLSKTEKRTFQVAYLKSEANTWLGFVKLRLLPTSHDSTVSCD 66
           NE  +  +  L +   QW   +   RT     L+  A  W  F+K +LLP SH++TVSC 
Sbjct: 166 NETYHGILENLCLSNIQWNGQQMSHRTVDRERLQPRAKLWNHFMKYKLLPNSHNTTVSCQ 225

Query: 67  LVLLVFAILRSLSIDVRKIISSEIHTCWRKKMGKLFFPNTITMLCRRVGVPASPEDVI 125
            +LL+ +I+   SID+ KII  ++HT  ++    L FPN IT LCR+  VP    D I
Sbjct: 226 RMLLLHSIIVGSSIDIGKIIVEQVHTYLKRHASALVFPNLITALCRKKKVPEEQFDEI 283

[Close]
BLAST of Spg029130 vs. ExPASy TrEMBL
Match: A0A5D2MA47 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G168900v1 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 7.9e-13
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 0 

Query: 21  GAQWRLSKTEKRTFQVAYLKSEANTWLGFVKLRLLPTSHDSTVSCDLVLLVFAILRSLSI 80
           G+QW + K    + +  YLK  AN W  FV+   +P SH  T+S + +LL++AIL   SI
Sbjct: 146 GSQWIIRKYGSHSCRREYLKPIANVWFYFVQYSFMPISHSYTISMERMLLLYAILTEKSI 205

Query: 81  DVRKIISSEIHTCWRKKMGKLFFPNTITMLCRRVGV 117
           +V KII  EIH C +KK G ++FP+ IT LC +  V
Sbjct: 206 NVGKIILKEIHNCAKKKAGSVYFPSLITSLCLKACV 241

[Close]
BLAST of Spg029130 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-12
Identity = 48/127 (37.80%), Postives = 68/127 (53.54%), Query Frame = 0 

Query: 6   SNEQLNAAVRELGIEGAQWRLSKTEKRTFQVAYLKSEANTWLGFVKLRLLPTSHDSTVSC 65
           + + L   +  +   GA+W +S     T   + L   A  W  F+K RLLPT+H  TVS 
Sbjct: 137 TQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSK 196

Query: 66  DLVLLVFAILRSLSIDVRKIISSEIHTCWRKKMGKLFFPNTITMLCRRVGVPASPEDVIL 125
           D +LL+ ++L   SI+V ++I SEI  C  +K G LFFP+ IT LCR    P    +  L
Sbjct: 197 DRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKL 256

Query: 126 IDKGIID 133
            + G ID
Sbjct: 257 HNTGEID 263

The following BLAST results are available for this feature:
BLAST of Spg029130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_024971944.11.5e-1333.33uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus][more]
EXB53755.14.3e-1335.34hypothetical protein L484_022412 [Morus notabilis][more]
KAE8684537.14.3e-1331.05DNA-directed RNA polymerase V subunit 5C-like [Hibiscus syriacus][more]
KAE8705556.15.6e-1338.14Detected protein of unknown function [Hibiscus syriacus][more]
TYH88163.11.6e-1243.75hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum][more]
BLAST of Spg029130 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg029130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6A2YYY22.1e-1331.05DNA-directed RNA polymerase V subunit 5C-like OS=Hibiscus syriacus OX=106335 GN=... [more]
W9QTD92.1e-1335.34Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1[more]
A0A6A3AN192.7e-1338.14Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110422pilon... [more]
A0A5D2MA477.9e-1343.75Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G168900v1 P... [more]
A0A2P5BCG41.8e-1237.80Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
BLAST of Spg029130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 292..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..336

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg029130.1Spg029130.1mRNA