Spg029023 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg029023
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationscaffold5: 16161087 .. 16170052 (-)
RNA-Seq ExpressionSpg029023
SyntenySpg029023
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTCTACGGAGCTCGACGTTCGACCCTTGACCATTTGTACCCAAGGCCTCGAACTGTGCATCACCCCTTGGCCATTTGTACTCAAGGTGCACCGATGACTTAGCAAAGTATTGGCCCTTCCCCAGGCGCCTAATACTTGCTTTCTAGACTCATCACACCAACCCTTGACCATTTGTATCCAAGGCCTTGATGCTCTCTTAAAACCAATGGTGACATGTCACCCCTCGACCATTTGTACCCGAGGTGCACTGACATTCACTCATCATTCCTTTGTTTAACATTTAGGTCCGTAACCTCTTTCTCACATCTATCTATTATGCATATGCCCTGCAACATGCTTCTAGACTCATATGCCCACCAAGTATATACATACAACAACTTGCTCACGACTCATGCTTAACTCATGAATGCATAACAAAACAAGCATGCTTTACAACCAATCATCACACAATAACAGTTCATGCTTTTCAGAGATTACATATATATTTATTCAAGTGTCGTTGCGCTTCTAGAAAAAGCACGACCTGCCACCTGTCCTAACAAACCTATATTATAATTGCATAGCAAGCTGTGAATTATATGTTACACAAAAGACAAAATTAGCCCAAAGAAAATAAATGTTCCACTGGTAATAATAAGATACAACCAATCCAATACTTTCCTTGTATGTAAATGAGGATTTTGCGAATCCAAACTATCAAAAAATAGAAGAAAATGCCGTTGGAGATTGCCTTTGATGCGGCAAAAATTATAGGGATTTTCATACAACTTGGTGTTGACAAAGGAAACCATTTAACTGTACTATGGACTTAAGTTAGGTAGCACGACATCTTCTCCAACAAACTTTAACACCTAATTATTTCAGTACATACTTTTTAATTAATTTGTATTTGCTTATAAATTTCATCAACAAATTATCTTTTTGTAGATGAGGATTTTGGATGTTGTTGGATCTGTTTCTTTCCATGCTGAAGAAGAAATTCTTGCTTTTACAGTATCTGAAAAGGTGAAGTTTCCTACCCTCACACCCATCTTCTAATATTTATGACAGTTTTATATATTTAAATCATTTTAATTTAATTATTATTCAATAACTCCAGTTACATATTTGGAGATACAAGCAAGGCAGTGATTTTTATAATATACTAACTGCATCGGGACCAATTCGAAAAGTTCAATTCCATCCACTGGGTGCGCCATATATATTGACGGCTGAGGTAAATCATTTGAGCATAGTTTCATTTTTTAATATAGTTAAAAAACAGTGTTTTTGGTCTCTGAACTTTCATTAAGTAACGATTTATAGTCCTTAAACTTTTCAAAGTAACGATCTAGTCCCTGTACTTTCATATTAGTCGTAACAATTTAGTCCCTGAACTTTTATATTCTTTGATATAGCATGCATGCACATAGGTGAATAGAAAATTCAGGCGTAGCTTGGTCATAGCATTTTGTGGTTTTGATCCAGAAGGGTTGGATGATATACTTTTTACCACCACCATTAAATCAGGTGACAAGAAGAATTTCACTACTCAACTACTAGTTACATAATGGCAGTTCGTTAATAGTCTACATTTTTTTTTAGATATTAGAATCGATTTAAGTCCAAGTTGGAGTTGTGCACCAAGATTTCGGATTCGTCGAAATGCTAAAAGTAATTACTCGACGTTGCATTTGATTAACCCTGTTGACTTCTTTACTCCACCCGCGATGTCGAGATTGTCTCTGAATGCTCAAGCTGTGGTGGAGCGCCCCCATATTGTGAAACTAAAAGTTTGGCGATATGATTCGATAGGCGACCATGTGCATAACAACCATCGTTTGTGCATACGGAACGTCATTCTAAACTAGTAATTGTACACTTAAGTTGATGGGTTGGGTAAATTTAACTGGTAATTGTACACTTAAGTTGATGGGTTGGGTAAATTTAATTTTGGATATCTTAACAGGCTTTTATATGCAGTGAAAGGAGTGCAGATATCTCTCCACGGGCAAGTTTCTGGTTGCTTGTGTCGTTAAGAGGAGAGAAGCTAAGAAGAGGATCTTCGAATTATTTCCTGAGGAAAAGTTCGATCACTCCACAGTTTGCACGCTTGTATATTATATACGCGTGTATTCTATAGCAGATTCCAGGTAGTAGGACATTTATAAATATTTCCGTTTTATGAGGCGTTCGCTTTTGTTAAAAATTGAATAAATATTTTTGTTATAATATTGTTTGTTTGTTTGTTTTTGCATGAAATAGTTTTGGCAAAATTATATAAAAAAAAAAGAATCAAAGCTGGTTATGCCGTGAATGCAATTCAGGTTTGTTGAAGTTTATAAGTTTACATTGATTTTTTCATTAAATTTGCATGCATGCATAAGCTAGAATAAGAAATGCAAGATACGATTGCAGTTTTCCCCAACTTCAGAATATATCTTAGTCGGGTATGGGAAAAGACATAGTTCACTTGTCTCGGGAGTAGAAATGAAAGCTGGGAAGGTTGTGCATGCATTTACCATACTGAGGTAATTAATTGTACATTTAAATAGTATAGCTTCAAGCAAATGACACTTTTTAGGTTAAAAAACACATTTGGTCCCTAAGTCATTACTTTTGAAACTTCAAGGACTAAATCGATACTTTAATGAATGTTCAAGGACCAAAAGTGGTTTTTTAACCCATGTTTTTATTATCTGACATGATGTTTCCCAAGCTCAGATTTATCGAATCTTCGACATGGAACTTGTGGGAACCGTGAGGTAGTTCAACAGAGGTGACCAGCGTGGAATGCTTCCATCCAGAGCCTGTAGAAGGTATAGTCTATTGCACAAAGGTATGTGGACAAATGACTTTACATATATATAATATTGTAATTGTATGATTATTTTTGTATGCTTTGGATGCTAAATACTAATTTATTTAGAAAATTTGTTTAGGATTGGAAGCGACGAAAAGTTAAGGTTCTCACACGTCACCCAGAAAAGGAAGAAAACTAAACTGAGAAGATGGTTTGGTTTAGGCGGCTGAGATCATTTTTGTCGAAGGTAATTCAAATACATTTTGTGTTATGAACGAAAAGGAAAAATATTGGAGAAAAAAGAAAGAAAATGTTGCAGATGGTTTAAGTGGTTCTAGCTGGGTTTTTTTTTTTTTTTTTTTGAATTAAAAGTTTTTGAAACTCAAGTAGGTTTAAGATGGGATAACATATATTTCACCCTTATAAACCCAAAAACTTTGAATTCCAAAAAAAAAAACAACCAGCTAGAACCACTTAAACTATCATCTGCAACATTTTCTTTCTTTTTTCTCCAATATTTTTCCTTTAAGTTCATATCCAATCCTAAACAAATTTTCTAAATAAATTAGTATTTAGCATCCAAAGCATACAAAAATAATCATACAATTACAATATTATATATATGTAAAGTCATTTGTCCACATACCTTTGTGCAATAGACTATACCTTCTCCAGGCTCTGGATGGAAGCATGCCACGCTGGTTGTCTTGGGCATGCTTGTCCAGGGCGAGTTGTGTCTATGGCCGCATGCCCAAACCATCCTCAACCACCATGTTTTAGAGTCATGTAATTAGTTTTGTTGTTTACTTTTTGTTGTAACAAGTTTTGGGGGCGTATGACTCCTCGCGATGTCGCATGTTCACGCCTGCCAGACTAAAAATGCCTCATAATGTACTATAGGGGGGACCAAGTAGTCATCAAACCACCCCCCTACCAAGCGTTGTACACTTTCTTGCAATCAAGCTTTCTTGCATCCTTGTATTCAATGCTTTCTTTTAAAGATGTTTTCAATGCTTTTTCTCTCTCACGTTTTATAAAACCAATTTTCTCTTAAAACGTGAGCGGAGGCTAGACCCTACGCCGAAGTTGTCCGCGATTTGCGATTTTTGTACGGCTGACTTGCCCGCCGGGTTAGGACAAGTGCCGCACAATCGCCCGTCCCGATTACGAAAGTTTGGGATTGTGACAAGTGGTACCAGAGCTTAGTTTGCTCCTTGGCTTTCGAGAAGTTACAATCATGTCGGCGACTAAACAGTTGGCTAAGACGCATGTCGAGCGACTTGTTGAGATAGAGGAACAGTTGCTTTTCCTGAGGGAAATACCGGACTCGGTACGATACGTTGAACATCGAATTGAAGAGATCTCCGAGAAGCTAGGTGAGATCGATGCGGTGAATGCCCGAATCGATGGGCTACCCGTACAAGAGTTGGCATTGAGGGTTGAGACCCTAGAAAGCAAGACTACGAAGCCTGGTAGTACTGAGCGTGGGGAGAGCTCCACGAGTTCCGTTGACAAGATGAGCGAACGTGTCGACGAACTAAATACATCCCAAACAACCATGCTGCGGTTGTTTAATGAAATGACTGAAGACTTTAGAGCCACCATCGAAACCTTGAGAGGTGAGATGGCCGAGATGAATACGCGATTGAATCTGACTATGCGAGCAGTTGAGAATCAGACCCCGAATCAAGTGCACGGGGTGCACAACAAGTTTAAAGTTCCGGAACCCAAGGCCTTCAGTGGGAACCGTGACGCGAAAGAGCTCGAAAATTTTATCTTCGACGTTGAGCAATATTTCAAAGCTATTGGAACGACTTCAGAAGAGATGAAAATCACCTTGGCCACGATGCATCTGTCTGATGATGCAAAGTTATGGTGGCGCACCAAGGTGAATGATATCCAGAGTGGCCTGGCCACAATCGATTCATGGGAAGACCTTAAGAAAGAATTAAGGGCGCAGTTCTTCCCTGAGAATGTCGAGTTTATAGCAAGACGCAAGCTTCGCGAGCTGAAGCACACTGGAGGGATAAGGGAGTATGTGAAACAGTTCTCGACCGTGATGCTCGATATCCGTGATATGTCAAAAAAAGACAAAGTATTCTGTTTTGTCGAAGGCTTGAAACCATGGGCGAGGACGAAACTATATGAACAGAAAGTCCAAGACCTTGCCTCTGCCCTGGCTGCCGCAGAGAGACTCTTTGACTATAGTGGTGACTCAGTTCCTCAGAAGAGAAACACACCACCCCCGAACAATGGAAACCGACCTTTTAGGTCAACAAGTCAGAAGCCTGGAGGGACAGATAAGAAGCCTCAGACCAGTTTCTCAGGTCCTTCTCGAGGACCTTATCCGCCGAGGCCGAACTCAACAGGGACCTTAGCCTGCTTTCTATGCAAGGGCCCCCACAGAGTGGCAGAGTGTCCGCACCGAGCCGCTCTCACCGCCCTTCAAGCCTCAGTTCAGTCCTGCAATGATCCCGAACCTGAGGCCGAATGTGATAAATCAGAGGAAGAAGAAAACACGCCAAGGATGGGAGCTTTGAAATTCCTATCGGCCATACAAAGAAAAGCCTCTGGGTCAAAAGATGCGTCCGAGAAGGGGTTGATGTTTGTTGATGCAGTGATCAATGGTCGACCTGCAAGAGGTACCATGATTGACTCTGGCGCAACTCACAACTTCATTTCTGAACAAGAGGCCCGCAAGTTGGGGCTAAAAGTTGAGAAAGACTCCGGTAAGATGAAAGCAATGAATTCAGAAGCCTTGCCCATTGTGGGGACTTCCAGGAAGGTGCCATTGAAATTGGGAGAGTGGACAGGCTGTGTGGACCTAGTAGTGGTTCGCATGGACGACTTCGATGTGGTATTAGGGATGGAATTTCTCTTGGAGCATAAGGTGATCCCTTTACCACTCGCAAAATGCATGATCGTTACTGATAGTAGTCCCACCGTAGTCCCAGCGAGTATCAAGCAACCTAGCGGCGTGAGAATGATTTCGGCCTTACAGTTAAAGAAAGGCCTCAGCCGAGACGAGCCTACCTTCATGGCCATTCCGATGGTCGAAGAACCCTCCATGGCGGAGGAAATCCCGCCAGAAGTTTGTGATGTTTTACAAGAGTATGCTGATATAATGCCGGACAGTTTGCCAAAGACCTTGCCCCCTCGCCGGGGAATTGACCATGAGATTGAGCTCTTACCAGGGACCAAACCCCCTGCGAAAAATGCCTACCGGATGGCACCACCAGAGTTAGCAGAGTTGAGGAAACAGTTAGACGAACTCTTGAATGCAGGGTTTATCCGTCCTGCAAAAGCGCCTTATGGGGCTCCTGTGTTGTTTCAAAAGAAAAAGGATGGGACCCTGCACCTGTGTATTGACTACAGAGCCCTGAACAAGGTCACAGTGCGAAACAAGTACCCCCTGCCGATAATCTCTGATCTATTTGACCAGTTGCATGGGGCTAAATATTTTACCAAGTTAGACCTTCGATCAGGGTACTATCAAGTTCGCATCGCAGAGGGCGACGAGCCCAAAACCACATGCATCACGAGATATGGGGCCTTCGAGTTTCTTGTGATGCCCTTTGGTCTAACCAATGCACCAGCCACTTTCTGTACGTTGATGAACCAAGTCTTCCACGAGTATCTCGACCAGTTTGTAGTCGTCTATCTGGATGACATAGTGGTGTATAGTCCTACCCTGGAAGAGCACCGAGTGCATTTACGCCTTGTTTTTGACAAGTTGAGGCAAAATCAGCTATACGTAAAAAAGGAGAAATGTGCTTTTGCTCAACAGCGCATAAACTTCCTTGGTCATGTGATCGAATATGGCCAAATCAGTATGGATAGCGACAAGGTGAAGGTCATTCAAGAATGGAGGGTTCCTACTTCTGTGACAGAGTTCCGTTCATTCTTAGGCCTGGCGAACTACTACCGTCGATTCATTGAAGGATTTTCAAGACGAGCCGCACCGTTGACAGAGTTATTGAAGAAGAGTATAACATGGCATTGGTCGGCTGAATGCCAGAGGGCTTTTGAAGAGTTAAAGACAACCATGACGAGGGGTCCTGTCCTCGGATTGGTGAATGTAACGAAACCGTTTGAAGTCGAGACCGATGCGTCCGACTTTGCTCTCGGAGGCGTGCTTCTCCAAGAAGGTCACTCTATCGCCTACGAGAGCCGCAAGTTGAATAATGCTGAGAGGAGGTACACTGTCTCCGAGAAAGAGATGTTGGCTGTTGTCCACTGCCTCAGAGCCTGGAGGCAATATCTATTGGGATCGCGTTTTGTGGTCAGAACTGACAACAATGCTATCTGCCACTTCTTCGATCAGCCAAAGTTAACCGCAAAGCAGGCGCGGTGGCAAGAATTTTTGGCTGAGTTTGACTTCAGATTCGAACACAAGAAAGGAAAGAGTAACCAAGCAGCTGATGCCCTGAGTCGGAAGGGTGAGCATGCGGCCCTGTGCATGCTTGCTCATATCCATGCCAGTAAAGTCGACGGATCCATGCGCGACATCATCAAAGAACATTTGTTGAAAGACCCCTCAGCTCAAGCTGTCATGTCCTTAGCCAAAGCCGGAAAGACTAGGCAGTTTTGGGTCGAGGGAGACTTGTTGTTGACGAAAGGAAATCGATTATATGTTCCTCGGGCAGGAGACTTGAGGAAAAAGCTGATGTACGAGTGTCACGACACTTTATGGGCCGGTCATCCTGGATGGCAACGCACGTATGCCCTTTTGAAGAAGGGGTACTTTTGGCCGAGCATGCGAGACGATATAATGCAGTACACGAAGACTTGCCTTGTATGTCAACAGGACAAGGTTGAGAAAGCGAAGGTATCGGGGCTCCTCGAACCTCTGCCGGTCCCAACTAGACCTTGGGAGAGTGTCTCCATGGATTTCATCACTCACCTCCCGAAGGTAGGGGACCAAGAGGCGATCTTAGTTGTCATCGACCGATTTTCGAAGTATGCAACTTTCATAGCAACGCCCAAGCAGTGTTCAGCTGAATTGACGGCTCAGTTATTCTTTAGGCACGTTGTTAAGTTATGGGGGATCCCTTCAAGCATTGTGAGCGATAGAGACGGTCGTTTTATCGACACTTTCTGGACAGAATTATTTACATTCTTGGGGACGAGTCTGAACATATCCTCAAGCTATCACCCGCAGACCGATGGACAGACTGAAAGATTCAACTGTATGCTTGAAGAATATCTGCGCCATTTTGTCGATGCCCGACAGAAGAACTGGGTTCAGTTGCTTGATGTGGCTCAGTTCTGTTTTAACTGCCAAACGAGTTCATCTACAGGAAAGAGCCCCTTTGAAGTTGTTAGCGGAAGACAACCTTCGTTGCCACATATTATTGACCATCCATATGCAGGGAAGAATCCTCAAGCCCAGAACTTTACAAAGGAGTGGAAACAAACCACTGACATCGCTCGTGCCTACCTAGAGAAAGCATCTACGCGTATGAAGAAATGGGCGGACAAGAAACGCCGCCCCCTCGAGTTCCGAGCTGGTGACCAAGTCCTGATAAAGTTAAGACCTGAACAGATTCGATTTCGAAGCCGGAAAGATCAGCGCCTCGTGAGGAAGTATGAAGGACCTGTAGAAGTCCTCAAGAAGATCGGGACAACCTCGTATAGGGTGGCGTTGCCTACATGGATGAAAATCCACCCAGTAATTCATGTGAGCAACTTAAAGCCCTATCATCCCGATCTAGATGATGATTGTCGAAATGCCATCGTCCGACCAGGGATCGACCTCAAGCAGAAAGAAGAGAAAGTAGCTGAAGAGATCCTAGCCGAAAGAGTCAGGAAGACTGGAAGACCCGTACGGAGGATCCAAGAATTCCTTATCAAGTGGAAGGACCTCCCTACGGAGGAAACAAGCTGGGAACGCGCAGAAGACTTAGAAGCGTGGAAGCAGAAGATCGAAGAATTCAAGCTGCGTCAGTTGACAGGGTCGTCAACAGTTTAAGTGGGGGAGAATGTCTTGGGCATGCTTGTCCAGGGCGAGTTGTGTCTATGGCCGCATGCCCAAACCATCCTCAACCACCATGTTTTAGAGTCATGTAATTAGTTTTGTTGTTTACTTTTTGTTGTAACAAGTTTTGGGGGCGTATGACTCCTCGCGATGTCGCATGTTCACGCCTGCCAGACTAAAAATGCCTCATAATGTACTATAG

mRNA sequence

ATGCTCTCTACGGAGCTCGACGTTCGACCCTTGACCATTTGTACCCAAGGCCTCGAACTGTGCATCACCCCTTGGCCATTTGTACTCAAGATGAGGATTTTGGATGTTGTTGGATCTGTTTCTTTCCATGCTGAAGAAGAAATTCTTGCTTTTACAGTATCTGAAAAGGTGAATAGAAAATTCAGGCGTAGCTTGGTCATAGCATTTTGTGGTTTTGATCCAGAAGGGTTGGATGATATACTTTTTACCACCACCATTAAATCAGATATTAGAATCGATTTAAGTCCAAGTTGGAGTTGTGCACCAAGATTTCGGATTCGTCGAAATGCTAAAAGTAATTACTCGACGTTGCATTTGATTAACCCTGTTGACTTCTTTACTCCACCCGCGATGTCGAGATTGTCTCTGAATGCTCAAGCTGTGGTGGAGCGCCCCCATATTGTGAAACTAAAAGTTTGGCGATATGATTCGATAGGCGACCATGTGCATAACAACCATCGTTTATATCTCTCCACGGGCAAGTTTCTGGTTGCTTGTGTCGTTAAGAGGAGAGAAGCTAAGAAGAGGATCTTCGAATTATTTCCTGAGGAAAAGTTCGATCACTCCACAGTTTGCACGCTTGTATATTATATACGCGTGTATTCTATAGCAGATTCCAGACATAGTTCACTTGTCTCGGGAGTAGAAATGAAAGCTGGGAAGGTTGTGCATGCATTTACCATACTGAGCTCAGATTTATCGAATCTTCGACATGGAACTTGTGGGAACCGTGAGACTATACCTTCTCCAGGCTCTGGATGGAAGCATGCCACGCTGGTTGTCTTGGGCATGCTTGTCCAGGGCGAGTTGTGTCTATGGCCGCATGCCCAAACCATCCTCAACCACCATGTTTTAGAGTCATTGGTACCAGAGCTTAGTTTGCTCCTTGGCTTTCGAGAAGTTACAATCATGTCGGCGACTAAACAGTTGGCTAAGACGCATGTCGAGCGACTTGTTGAGATAGAGGAACAGTTGCTTTTCCTGAGGGAAATACCGGACTCGGTACGATACGTTGAACATCGAATTGAAGAGATCTCCGAGAAGCTAGGTGAGATCGATGCGGTGAATGCCCGAATCGATGGGCTACCCGTACAAGAGTTGGCATTGAGGGTTGAGACCCTAGAAAGCAAGACTACGAAGCCTGTTTTGGGGGCGTATGACTCCTCGCGATGTCGCATGTTCACGCCTGCCAGACTAAAAATGCCTCATAATGTACTATAG

Coding sequence (CDS)

ATGCTCTCTACGGAGCTCGACGTTCGACCCTTGACCATTTGTACCCAAGGCCTCGAACTGTGCATCACCCCTTGGCCATTTGTACTCAAGATGAGGATTTTGGATGTTGTTGGATCTGTTTCTTTCCATGCTGAAGAAGAAATTCTTGCTTTTACAGTATCTGAAAAGGTGAATAGAAAATTCAGGCGTAGCTTGGTCATAGCATTTTGTGGTTTTGATCCAGAAGGGTTGGATGATATACTTTTTACCACCACCATTAAATCAGATATTAGAATCGATTTAAGTCCAAGTTGGAGTTGTGCACCAAGATTTCGGATTCGTCGAAATGCTAAAAGTAATTACTCGACGTTGCATTTGATTAACCCTGTTGACTTCTTTACTCCACCCGCGATGTCGAGATTGTCTCTGAATGCTCAAGCTGTGGTGGAGCGCCCCCATATTGTGAAACTAAAAGTTTGGCGATATGATTCGATAGGCGACCATGTGCATAACAACCATCGTTTATATCTCTCCACGGGCAAGTTTCTGGTTGCTTGTGTCGTTAAGAGGAGAGAAGCTAAGAAGAGGATCTTCGAATTATTTCCTGAGGAAAAGTTCGATCACTCCACAGTTTGCACGCTTGTATATTATATACGCGTGTATTCTATAGCAGATTCCAGACATAGTTCACTTGTCTCGGGAGTAGAAATGAAAGCTGGGAAGGTTGTGCATGCATTTACCATACTGAGCTCAGATTTATCGAATCTTCGACATGGAACTTGTGGGAACCGTGAGACTATACCTTCTCCAGGCTCTGGATGGAAGCATGCCACGCTGGTTGTCTTGGGCATGCTTGTCCAGGGCGAGTTGTGTCTATGGCCGCATGCCCAAACCATCCTCAACCACCATGTTTTAGAGTCATTGGTACCAGAGCTTAGTTTGCTCCTTGGCTTTCGAGAAGTTACAATCATGTCGGCGACTAAACAGTTGGCTAAGACGCATGTCGAGCGACTTGTTGAGATAGAGGAACAGTTGCTTTTCCTGAGGGAAATACCGGACTCGGTACGATACGTTGAACATCGAATTGAAGAGATCTCCGAGAAGCTAGGTGAGATCGATGCGGTGAATGCCCGAATCGATGGGCTACCCGTACAAGAGTTGGCATTGAGGGTTGAGACCCTAGAAAGCAAGACTACGAAGCCTGTTTTGGGGGCGTATGACTCCTCGCGATGTCGCATGTTCACGCCTGCCAGACTAAAAATGCCTCATAATGTACTATAG

Protein sequence

MLSTELDVRPLTICTQGLELCITPWPFVLKMRILDVVGSVSFHAEEEILAFTVSEKVNRKFRRSLVIAFCGFDPEGLDDILFTTTIKSDIRIDLSPSWSCAPRFRIRRNAKSNYSTLHLINPVDFFTPPAMSRLSLNAQAVVERPHIVKLKVWRYDSIGDHVHNNHRLYLSTGKFLVACVVKRREAKKRIFELFPEEKFDHSTVCTLVYYIRVYSIADSRHSSLVSGVEMKAGKVVHAFTILSSDLSNLRHGTCGNRETIPSPGSGWKHATLVVLGMLVQGELCLWPHAQTILNHHVLESLVPELSLLLGFREVTIMSATKQLAKTHVERLVEIEEQLLFLREIPDSVRYVEHRIEEISEKLGEIDAVNARIDGLPVQELALRVETLESKTTKPVLGAYDSSRCRMFTPARLKMPHNVL
Homology
[Close]
BLAST of Spg029023 vs. NCBI nr
Match: XP_022947738.1 (uncharacterized protein LOC111451512 [Cucurbita moschata] >XP_022947739.1 uncharacterized protein LOC111451512 [Cucurbita moschata])

HSP 1 Score: 139.8 bits (351), Expect = 5.3e-29
Identity = 95/257 (36.96%), Postives = 132/257 (51.36%), Query Frame = 0 

Query: 39  SVSFHAEEEILAFTVSEKVN---------------------------------------- 98
           S+S HAEEEILAFT+ ++++                                        
Sbjct: 149 SISLHAEEEILAFTIDKELHIWRYNQDNHSHAILIASGTIKKVQFHPLGAPYILTAEVNN 208

Query: 99  -RKFRRSLVIAFCGFDPEGLDDILFTTTIKS-DIRIDLSPSWSCAPRFRIRRNAKSNYST 158
            +  +RS++I F  + PEG +DIL TTT  + D  I +  S   A  FRIRR   +N+  
Sbjct: 209 CKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKV-TNFCP 268

Query: 159 LHL-INPVDFFTPPAMSRLSLNAQAVVERPHIVKLKVWRYDSIGDHVHNNHRLYLST--- 218
           L + +NP+  F PPA   L +  Q VVE   +V LK+W+YD+  D+V  N RL +     
Sbjct: 269 LTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQYDAKADNVLENERLCIPNVVL 328

Query: 219 -----------GKFLVACVVKRREAKKRIFELFPEEKFDHSTVCTLVYYIRVYSIADSRH 239
                      GKFLVACVV R++A ++IF+LF  E+ D ST+CTLVY IRVYSIAD   
Sbjct: 329 NCERSADISPCGKFLVACVVNRQKADEKIFKLF-YEQLDDSTLCTLVYDIRVYSIADCSF 388

[Close]
BLAST of Spg029023 vs. NCBI nr
Match: XP_023534521.1 (uncharacterized protein LOC111796064 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.8 bits (351), Expect = 5.3e-29
Identity = 95/257 (36.96%), Postives = 132/257 (51.36%), Query Frame = 0 

Query: 39  SVSFHAEEEILAFTVSEKVN---------------------------------------- 98
           S+S HAEEEILAFT+ ++++                                        
Sbjct: 149 SISLHAEEEILAFTIDKELHIWRYNQDNHSHAILSASGTIKKVQFHPLGAPYILTAEVNN 208

Query: 99  -RKFRRSLVIAFCGFDPEGLDDILFTTTIKS-DIRIDLSPSWSCAPRFRIRRNAKSNYST 158
            +  +RS++I F  + PEG +DIL TTT  + D  I +  S   A  FRIRR   +N+  
Sbjct: 209 CKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKV-TNFCP 268

Query: 159 LHL-INPVDFFTPPAMSRLSLNAQAVVERPHIVKLKVWRYDSIGDHVHNNHRLYLST--- 218
           L + +NP+  F PPA   L +  Q VVE   +V LK+W+YD+  D+V  N RL +     
Sbjct: 269 LTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQYDAKADNVLENERLCIPNVVL 328

Query: 219 -----------GKFLVACVVKRREAKKRIFELFPEEKFDHSTVCTLVYYIRVYSIADSRH 239
                      GKFLVACVV R++A ++IF+LF  E+ D ST+CTLVY IRVYSIAD   
Sbjct: 329 NCERSADISPCGKFLVACVVNRQKADEKIFKLF-YEQLDDSTLCTLVYDIRVYSIADCSF 388

[Close]
BLAST of Spg029023 vs. NCBI nr
Match: KAG6605288.1 (S-adenosylmethionine carrier 1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.1 bits (344), Expect = 3.4e-28
Identity = 94/257 (36.58%), Postives = 131/257 (50.97%), Query Frame = 0 

Query: 39  SVSFHAEEEILAFTVSEKVN---------------------------------------- 98
           S+S HAEEEILAFT+ ++++                                        
Sbjct: 550 SISLHAEEEILAFTIDKELHIWRYNQDNHSHAILIASGTIKKVQFHPLGAPYILTAEVNN 609

Query: 99  -RKFRRSLVIAFCGFDPEGLDDILFTTTIKS-DIRIDLSPSWSCAPRFRIRRNAKSNYST 158
               +RS++I F  + PEG +DIL TTT  + D  I +  S   A  FRIRR   +N+  
Sbjct: 610 CTNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKV-TNFCP 669

Query: 159 LHL-INPVDFFTPPAMSRLSLNAQAVVERPHIVKLKVWRYDSIGDHVHNNHRLYLST--- 218
           L + +NP+  F PPA   L +  Q VVE   +V LK+W+YD+  ++V  N RL +     
Sbjct: 670 LTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQYDAKAENVLENERLCIPNVVL 729

Query: 219 -----------GKFLVACVVKRREAKKRIFELFPEEKFDHSTVCTLVYYIRVYSIADSRH 239
                      GKFLVACVV R++A ++IF+LF  E+ D ST+CTLVY IRVYSIAD   
Sbjct: 730 NCERSADISPCGKFLVACVVNRQKADEKIFKLF-YEQLDDSTLCTLVYDIRVYSIADCSF 789

[Close]
BLAST of Spg029023 vs. NCBI nr
Match: XP_023007549.1 (uncharacterized protein LOC111500010 [Cucurbita maxima] >XP_023007550.1 uncharacterized protein LOC111500010 [Cucurbita maxima])

HSP 1 Score: 136.3 bits (342), Expect = 5.9e-28
Identity = 94/257 (36.58%), Postives = 131/257 (50.97%), Query Frame = 0 

Query: 39  SVSFHAEEEILAFTVSEKVN---------------------------------------- 98
           S+S HAEEEILAFT+ ++++                                        
Sbjct: 149 SISLHAEEEILAFTIDKELHIWRYNQDNHSHAILIASGTIKKVQFHPLGAPYILTAEVNN 208

Query: 99  -RKFRRSLVIAFCGFDPEGLDDILFTTTIKS-DIRIDLSPSWSCAPRFRIRRNAKSNYST 158
            +  +RS++I F  + PEG +DIL TTT  + D  I +  S   A  FRIRR   +N+  
Sbjct: 209 CKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKV-ANFCP 268

Query: 159 LHL-INPVDFFTPPAMSRLSLNAQAVVERPHIVKLKVWRYDSIGDHVHNNHRLYLST--- 218
           L + +NP+  F PPA   L +  Q VVE   +V LK+W+YD+   +V  N RL +     
Sbjct: 269 LTIEMNPLITFNPPARESLVMEEQTVVECLRVVGLKIWQYDAKAYNVLENERLCIPNVVL 328

Query: 219 -----------GKFLVACVVKRREAKKRIFELFPEEKFDHSTVCTLVYYIRVYSIADSRH 239
                      GKFLVACVV R++A ++IF+LF  E+ D ST+CTLVY IRVYSIAD   
Sbjct: 329 NCERSADISPCGKFLVACVVNRQKADEKIFKLF-YEQLDDSTLCTLVYDIRVYSIADCSF 388

[Close]
BLAST of Spg029023 vs. NCBI nr
Match: KAG7035246.1 (hypothetical protein SDJN02_02041, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127.9 bits (320), Expect = 2.1e-25
Identity = 78/176 (44.32%), Postives = 105/176 (59.66%), Query Frame = 0 

Query: 59  RKFRRSLVIAFCGFDPEGLDDILFTTTIKS-DIRIDLSPSWSCAPRFRIRRNAKSNYSTL 118
           +  +RS++I F  + PEG +DIL TTT  + D  I +  S   A  FRIRR   +N+  L
Sbjct: 4   KNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKV-TNFCPL 63

Query: 119 HL-INPVDFFTPPAMSRLSLNAQAVVERPHIVKLKVWRYDSIGDHVHNNHRLYLST---- 178
            + +NP+  F PPA   L +  Q VVE   +V LK+W+YD+  D+V  N RL +      
Sbjct: 64  TIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQYDAKADNVLENERLCIPNVVLN 123

Query: 179 ----------GKFLVACVVKRREAKKRIFELFPEEKFDHSTVCTLVYYIRVYSIAD 219
                     GKFLVACVV R++A ++IF+LF  E+ D ST+CTLVY IRVYSIAD
Sbjct: 124 CERSADISPCGKFLVACVVNRQKADEKIFKLF-YEQLDDSTLCTLVYDIRVYSIAD 177

[Close]
BLAST of Spg029023 vs. ExPASy TrEMBL
Match: A0A6J1G7S8 (uncharacterized protein LOC111451512 OS=Cucurbita moschata OX=3662 GN=LOC111451512 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-29
Identity = 95/257 (36.96%), Postives = 132/257 (51.36%), Query Frame = 0 

Query: 39  SVSFHAEEEILAFTVSEKVN---------------------------------------- 98
           S+S HAEEEILAFT+ ++++                                        
Sbjct: 149 SISLHAEEEILAFTIDKELHIWRYNQDNHSHAILIASGTIKKVQFHPLGAPYILTAEVNN 208

Query: 99  -RKFRRSLVIAFCGFDPEGLDDILFTTTIKS-DIRIDLSPSWSCAPRFRIRRNAKSNYST 158
            +  +RS++I F  + PEG +DIL TTT  + D  I +  S   A  FRIRR   +N+  
Sbjct: 209 CKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKV-TNFCP 268

Query: 159 LHL-INPVDFFTPPAMSRLSLNAQAVVERPHIVKLKVWRYDSIGDHVHNNHRLYLST--- 218
           L + +NP+  F PPA   L +  Q VVE   +V LK+W+YD+  D+V  N RL +     
Sbjct: 269 LTIEMNPLITFNPPASESLIMEEQTVVECLRVVGLKIWQYDAKADNVLENERLCIPNVVL 328

Query: 219 -----------GKFLVACVVKRREAKKRIFELFPEEKFDHSTVCTLVYYIRVYSIADSRH 239
                      GKFLVACVV R++A ++IF+LF  E+ D ST+CTLVY IRVYSIAD   
Sbjct: 329 NCERSADISPCGKFLVACVVNRQKADEKIFKLF-YEQLDDSTLCTLVYDIRVYSIADCSF 388

[Close]
BLAST of Spg029023 vs. ExPASy TrEMBL
Match: A0A6J1L591 (uncharacterized protein LOC111500010 OS=Cucurbita maxima OX=3661 GN=LOC111500010 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.8e-28
Identity = 94/257 (36.58%), Postives = 131/257 (50.97%), Query Frame = 0 

Query: 39  SVSFHAEEEILAFTVSEKVN---------------------------------------- 98
           S+S HAEEEILAFT+ ++++                                        
Sbjct: 149 SISLHAEEEILAFTIDKELHIWRYNQDNHSHAILIASGTIKKVQFHPLGAPYILTAEVNN 208

Query: 99  -RKFRRSLVIAFCGFDPEGLDDILFTTTIKS-DIRIDLSPSWSCAPRFRIRRNAKSNYST 158
            +  +RS++I F  + PEG +DIL TTT  + D  I +  S   A  FRIRR   +N+  
Sbjct: 209 CKNLKRSVLITFRSYHPEGSNDILLTTTSTAPDFSIVVDESAEAASTFRIRRKV-ANFCP 268

Query: 159 LHL-INPVDFFTPPAMSRLSLNAQAVVERPHIVKLKVWRYDSIGDHVHNNHRLYLST--- 218
           L + +NP+  F PPA   L +  Q VVE   +V LK+W+YD+   +V  N RL +     
Sbjct: 269 LTIEMNPLITFNPPARESLVMEEQTVVECLRVVGLKIWQYDAKAYNVLENERLCIPNVVL 328

Query: 219 -----------GKFLVACVVKRREAKKRIFELFPEEKFDHSTVCTLVYYIRVYSIADSRH 239
                      GKFLVACVV R++A ++IF+LF  E+ D ST+CTLVY IRVYSIAD   
Sbjct: 329 NCERSADISPCGKFLVACVVNRQKADEKIFKLF-YEQLDDSTLCTLVYDIRVYSIADCSF 388

[Close]
BLAST of Spg029023 vs. ExPASy TrEMBL
Match: A0A6J1DK29 (uncharacterized protein LOC111021829 OS=Momordica charantia OX=3673 GN=LOC111021829 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-23
Identity = 57/78 (73.08%), Postives = 72/78 (92.31%), Query Frame = 0 

Query: 317 MSATKQLAKTHVERLVEIEEQLLFLREIPDSVRYVEHRIEEISEKLGEIDAVNARIDGLP 376
           MSATKQL+K+HV+RLVEIEEQLL+LRE+PDS+R +E R++E SEK GEIDAVNAR+DGLP
Sbjct: 1   MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60

Query: 377 VQELALRVETLESKTTKP 395
           +Q++A+RVET ESK T+P
Sbjct: 61  IQDIAMRVETXESKATRP 78

[Close]
BLAST of Spg029023 vs. ExPASy TrEMBL
Match: A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.7e-23
Identity = 57/78 (73.08%), Postives = 71/78 (91.03%), Query Frame = 0 

Query: 317 MSATKQLAKTHVERLVEIEEQLLFLREIPDSVRYVEHRIEEISEKLGEIDAVNARIDGLP 376
           MS TKQL+K+HV+RLVEIEEQLL+LRE+PD +R +E R++E SEK GEIDAVNARIDGLP
Sbjct: 1   MSTTKQLSKSHVDRLVEIEEQLLYLREVPDFLRLLEARVDEFSEKFGEIDAVNARIDGLP 60

Query: 377 VQELALRVETLESKTTKP 395
           +Q++A+RVETLESK T+P
Sbjct: 61  IQDIAMRVETLESKATRP 78

[Close]
BLAST of Spg029023 vs. ExPASy TrEMBL
Match: A0A6J1DLQ6 (uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022320 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.0e-19
Identity = 53/77 (68.83%), Postives = 64/77 (83.12%), Query Frame = 0 

Query: 317 MSATKQLAKTHVERLVEIEEQLLFLREIPDSVRYVEHRIEEISEKLGEIDAVNARIDGLP 376
           MS TKQL K+H++RLVEIEE+LLFLREIPD++RYVE R++EIS K   ID VNARIDGL 
Sbjct: 1   MSTTKQLGKSHIDRLVEIEERLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLA 60

Query: 377 VQELALRVETLESKTTK 394
           ++EL LRVETLE K  +
Sbjct: 61  IRELMLRVETLEDKVKR 77

The following BLAST results are available for this feature:
BLAST of Spg029023 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022947738.15.3e-2936.96uncharacterized protein LOC111451512 [Cucurbita moschata] >XP_022947739.1 unchar... [more]
XP_023534521.15.3e-2936.96uncharacterized protein LOC111796064 [Cucurbita pepo subsp. pepo][more]
KAG6605288.13.4e-2836.58S-adenosylmethionine carrier 1, chloroplastic/mitochondrial, partial [Cucurbita ... [more]
XP_023007549.15.9e-2836.58uncharacterized protein LOC111500010 [Cucurbita maxima] >XP_023007550.1 uncharac... [more]
KAG7035246.12.1e-2544.32hypothetical protein SDJN02_02041, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Spg029023 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg029023 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G7S82.6e-2936.96uncharacterized protein LOC111451512 OS=Cucurbita moschata OX=3662 GN=LOC1114515... [more]
A0A6J1L5912.8e-2836.58uncharacterized protein LOC111500010 OS=Cucurbita maxima OX=3661 GN=LOC111500010... [more]
A0A6J1DK291.6e-2373.08uncharacterized protein LOC111021829 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1D9064.7e-2373.08Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1[more]
A0A6J1DLQ67.0e-1968.83uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
BLAST of Spg029023 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg029023.1Spg029023.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008233 peptidase activity