
Spg028856 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGACGCCGACCACCATCGACCACTACCGTCTGTCAGCGCTGACCACTGCTTGTAATTTTTTTTCTTTCATTCTTCTTTCTTCTTCTTCCTTTCTTCCTCTTCTAGAAGAAGGGGGAGAAATAAAGAGGAAGGGGAAAGAGGGAGAAGAAGAAAGAAAGAAAAGGAAAGAAAAAAGAGAGAGGAAAAAAAAAGAGAACGACAGGCACCAGTGGATATAGACAAACCATGGAAGGAGGAGGGAGAAGGAAGAGAGAGAAAAAGAATTAAAAAATTAAAATGTATTTTTTAATTAAAAACATGAAATAATTATAAAAAAGTACTTTCTATTAGTAATTAACGGAAAATTGGATGGAGGGGACATAAATGAAAACAAAAATCCAAAGTCCTGGGGTAAAATTATTGAATTTTAAAACTTAGAGACCTAAATGAAAAAACCTGTTTTTTTTCTTATTTTTTTAAGGTACAATATTTATATCCAATGTCTCAAAGAAAGAGGGAGACCCTCTAGATTCATTAAAAAAAATACTCATATTGTAGCAACCCCAAAAAAAAAAAAAGGAGATATTTTTTGGGGGTCTTCACGTTACCCGGTCAAGGAAGAAGAGGGGGGAATTTTCCCCCCATATTTTTCGGTCAGTGGACCACTTTTTTTTAAAAAAATTGAGATTCACGCCCCGTCTCTCCCTCATTCGTTTCTCTCTCACTCTCTCTCCCTCTCTCAGCTCGTGTAGCCTCCATTGTCGCCCTTCTCCGTTGCAGATCCACACGTCGCCGTCGTCGTTCACCGCTCGCCGTCTGTTCTGCCGTCGCCGCCGTGAGCCCCTTTGGTAAGGCAGTTTCGTTTTTCTCTCTCTCGCGCTTTCACTCCCTCTCATCTGCTCTCTCTCTCTACTAAAACCGCTGCAGCTTCTGTCACAGCGCCGCCACCGTCGACAGCCACCCACGAGCCCACGCCTCCACAAGCCTCCGCGTTGCCGCTGCCTCAGACCGTCGTTGTCGTCGCGAACAGCCCGGCGTCGCCGTCTCCTCGCTTCAGTCAGTAGCGCAACCATCTATCATGAAGGGTAGTAGTCCATAGTCGTATTTGGCTGTCGATTGGGTAAGCTTCAATGAGTTTCAGATTCGATTCAAGTTTCTTTTTCAGAAAATATTTTAGGGATAAAATAGCATTCGATTTCAAATTTGATAGCACGTTTCTGCCATCCGAATTTGAGTACCTAACCATTTAAGTTGCTATCAAGATGAGGGGTTCATCAATTTTGGAGTTGCCCACTAAATGTTAGCCTCGACTTCACGAAATTTCGCTTATTTAAAGTACTATCCAGCAGCTTTCCACACCATCTCGGGTGAGTTTTCAAGAGTAAAGACCCCTTAAGCATGGTTGAGTTTTAAGTATATTATTGGACTGATATTCTAATCTTGGAAAACCCCTTTTGTGTGTAGTTGTGAGTTTTTGGCTAGTGATTCAGAGAATCATTGGAGTAAGAATTTTTTAGTAAAATTCTTGGGCTGTTTTGTGTAAGTGGCTCCCCTATCACCATGTTGAATTTATTGCTGAAATGTTAAATTATTAGTTGTCACGATAATTGTAAAGTGTTGAGTGTTGATCTACTTTGATTGTGATGCTTGTGTTAGAATTATCCAAAATGTACTATGGCTTATATGTTTTGGATATGGGATGTTGAGCATGTAAATTAGAAATTTGCTATTTGTTGTGGGAAGTTGTATGAATGAAATGTGAATTTCCATGTGTTGTATTTCATAAAGCTAGTTAAGGGGCCTCACATTGCATATGTGTGACTCACGGTACGAGCGTTCTTGGAAATTTTATCACTAAAAAAAAAGCTTGGCTATATGGTCAAGACGTTATTCAAAATAATTTTCTTGAAACTTGGTGATATGACCAAGACATGATTTTTATTAATTTTCTTAAAACTTGGCGATATGGTCAAGAGAATGTTTTTAGTACCTATTTTCAAAACTTGGCGATATGGCCATGGTGACAAGTGGCGATACGGTCTTAGTGGCGTTAGGGTCACAATATAATTCGTGGCGATAGGGTCACGTATGGCGTTATGGCCAAGAGGTAAAGTTGGTTATAAAACAAAGTTCAGGTTCCCCCTTAAATGTTTGTGCTTGCATAACCAACCTTGGTAGAGGGGTTACTTAATGAGTATTTTTAATACTCATTCTTTGTTTATTTTATTTTTTTTTAGGCAAGGGCGAGAACGTGTTAGGCGACTGATCAATTGCACTTACTGGTGGTGCCATGGTGGACGGTGTCAGCATATTTTACTTCCGCATATCAGTTTTCATTGTTTGAATTTTCTATGTAAATATTCAAAGACTTATTTACTTTGTGTCATTTTTTTTTTTTTGGCGTGCAAATATTTTTATGATTTAGAAGTTTTCTTGGGATCCCAAATAAATGTTTTATTAAAATTATTCACCTGTTTTGTGCATCCTAGACTTCTAGGAAAAATTTAACTTCATAGTTCTTTGAATTATTCATGCATGTAGTAACGACCCTAGTCAGTCTTTAGGTTTTAAAAAGTTGGGGCGTTACAGTTGGTATCAGAGCACTAGGTTAAGGATTCTATAGACTGGTTTACATCGTAAACCTTAGGTGTTCCCATGGCCTACCAGCAAGCACCTTGTCATCGCCAGGTACACGATTGTCTTAATCAAAATGCTATTTGCTTATTTATTTGCCTATTTTAAATGTTTATATTTTATTTTGGTGAAGCATGATCACATGGTTGGTGTGAAAGTTAGTGTAATGGTTATTGTTATTACTATTAACTGCTATTATTATTATTCTTACTATTCTTTATTAAATAATAATAATAGTAGATAAGGTTGCAGTATGGGTTAGCATCGAATTAGATTTAGTCAAGTTTTGTCGAATATCAGAATCATGCCTCCTCGTGGAAGAGTTCGTGGAAGGGGTCGTGGAAGAGGTCGTGGAAGGGGTCGCGTGGCCCCTGAGGCAGTTGTGCCGCCAGTGGGACAAGAAAACAATCCGGCAGGGGATCCACAAGTAGAGCAGTCGGCACCTGCAGCAGAACCTGTCACAGTGGATGCTATTCAGGCAATTGTGTAGTCAGCGGTGGTCGGGGCAGTACAGTCTGCAGTACAAGCGGCAGTTGCAGGCGTGATTGCAGGACAGCAGGACCAAGCGCCTCAAAATAATGAAGCACTGTCGCGAGAAGCAAGGTGTTTAAGGGACTTTAGGAAGTGGGACCCCCGTCCATTCGATGGAGCATCGAAGGACCCCAAAGTGGCGGAGCTGTGGCTGTCTTCCATTGAAACCGTCTTTCGTCACATGAGTTGTCGGAAGACCATAAGGTTTATTGTGCCACTTTTCTGTTGCAAGACAATGCCTTGA ATGCTGACGCCGACCACCATCGACCACTACCGTCTGTCAGCGCTGACCACTGCTTCTCGTGTAGCCTCCATTGTCGCCCTTCTCCGTTGCAGATCCACACGTCGCCGTCGTCGTTCACCGCTCGCCGTCTGTTCTGCCGTCGCCGCCGTGAGCCCCTTTGCTTCTGTCACAGCGCCGCCACCGTCGACAGCCACCCACGAGCCCACGCCTCCACAAGCCTCCGCGTTGCCGCTGCCTCAGACCGTCGTTGTCGTCGCGAACAGCCCGGCGTCGCCGTCTCCTCGCTTCATTGTGAGTTTTTGGCTAGTGATTCAGAGAATCATTGGAGGTCACAATATAATTCGTGGCGATAGGGTCACGTATGGCGTTATGGCCAAGAGGCAAGGGCGAGAACGTGTTAGGCGACTGATCAATTGCACTTACTGGTGGTGCCATGGTGGACGGTGTGTTCCCATGGCCTACCAGCAAGCACCTTGTCATCGCCAGTCAGCGGTGGTCGGGGCAGTACAGTCTGCAGTACAAGCGGCAGTTGCAGGCGTGATTGCAGGACAGCAGGACCAAGCGCCTCAAAATAATGAAGCACTGTCGCGAGAAGCAAGGTGTTTAAGGGACTTTAGGAAGTGGGACCCCCGTCCATTCGATGGAGCATCGAAGGACCCCAAAGTGGCGGAGCTGTGGCTGTCTTCCATTGAAACCGTCTTTCGTCACATGAGTTGTCGGAAGACCATAAGGTTTATTGTGCCACTTTTCTGTTGCAAGACAATGCCTTGA ATGCTGACGCCGACCACCATCGACCACTACCGTCTGTCAGCGCTGACCACTGCTTCTCGTGTAGCCTCCATTGTCGCCCTTCTCCGTTGCAGATCCACACGTCGCCGTCGTCGTTCACCGCTCGCCGTCTGTTCTGCCGTCGCCGCCGTGAGCCCCTTTGCTTCTGTCACAGCGCCGCCACCGTCGACAGCCACCCACGAGCCCACGCCTCCACAAGCCTCCGCGTTGCCGCTGCCTCAGACCGTCGTTGTCGTCGCGAACAGCCCGGCGTCGCCGTCTCCTCGCTTCATTGTGAGTTTTTGGCTAGTGATTCAGAGAATCATTGGAGGTCACAATATAATTCGTGGCGATAGGGTCACGTATGGCGTTATGGCCAAGAGGCAAGGGCGAGAACGTGTTAGGCGACTGATCAATTGCACTTACTGGTGGTGCCATGGTGGACGGTGTGTTCCCATGGCCTACCAGCAAGCACCTTGTCATCGCCAGTCAGCGGTGGTCGGGGCAGTACAGTCTGCAGTACAAGCGGCAGTTGCAGGCGTGATTGCAGGACAGCAGGACCAAGCGCCTCAAAATAATGAAGCACTGTCGCGAGAAGCAAGGTGTTTAAGGGACTTTAGGAAGTGGGACCCCCGTCCATTCGATGGAGCATCGAAGGACCCCAAAGTGGCGGAGCTGTGGCTGTCTTCCATTGAAACCGTCTTTCGTCACATGAGTTGTCGGAAGACCATAAGGTTTATTGTGCCACTTTTCTGTTGCAAGACAATGCCTTGA MLTPTTIDHYRLSALTTASRVASIVALLRCRSTRRRRRSPLAVCSAVAAVSPFASVTAPPPSTATHEPTPPQASALPLPQTVVVVANSPASPSPRFIVSFWLVIQRIIGGHNIIRGDRVTYGVMAKRQGRERVRRLINCTYWWCHGGRCVPMAYQQAPCHRQSAVVGAVQSAVQAAVAGVIAGQQDQAPQNNEALSREARCLRDFRKWDPRPFDGASKDPKVAELWLSSIETVFRHMSCRKTIRFIVPLFCCKTMP Homology
BLAST of Spg028856 vs. NCBI nr
Match: XP_031739508.1 (uncharacterized protein LOC116403159 [Cucumis sativus] >XP_031739675.1 uncharacterized protein LOC116403209 [Cucumis sativus] >XP_031741725.1 uncharacterized protein LOC116403919 [Cucumis sativus] >XP_031745322.1 uncharacterized protein LOC116405472 [Cucumis sativus]) HSP 1 Score: 75.5 bits (184), Expect = 7.5e-10 Identity = 43/86 (50.00%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of Spg028856 vs. NCBI nr
Match: XP_031742890.1 (uncharacterized protein LOC116404512 [Cucumis sativus]) HSP 1 Score: 74.3 bits (181), Expect = 1.7e-09 Identity = 43/86 (50.00%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of Spg028856 vs. NCBI nr
Match: XP_031741726.1 (uncharacterized protein LOC116403920 [Cucumis sativus]) HSP 1 Score: 74.3 bits (181), Expect = 1.7e-09 Identity = 43/86 (50.00%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of Spg028856 vs. NCBI nr
Match: XP_022156662.1 (uncharacterized protein LOC111023512 [Momordica charantia]) HSP 1 Score: 73.9 bits (180), Expect = 2.2e-09 Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 0
BLAST of Spg028856 vs. NCBI nr
Match: XP_031743557.1 (uncharacterized protein LOC116404620 isoform X1 [Cucumis sativus] >XP_031743558.1 uncharacterized protein LOC116404620 isoform X1 [Cucumis sativus] >XP_031743559.1 uncharacterized protein LOC116404620 isoform X1 [Cucumis sativus] >XP_031743560.1 uncharacterized protein LOC116404620 isoform X1 [Cucumis sativus]) HSP 1 Score: 72.4 bits (176), Expect = 6.4e-09 Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 0
BLAST of Spg028856 vs. ExPASy TrEMBL
Match: A0A6J1DSJ6 (uncharacterized protein LOC111023512 OS=Momordica charantia OX=3673 GN=LOC111023512 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-09 Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 0
BLAST of Spg028856 vs. ExPASy TrEMBL
Match: A0A5A7TYM4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00220 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.3e-09 Identity = 50/131 (38.17%), Postives = 69/131 (52.67%), Query Frame = 0
BLAST of Spg028856 vs. ExPASy TrEMBL
Match: A0A5D3CI62 (Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00160 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.3e-09 Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of Spg028856 vs. ExPASy TrEMBL
Match: A0A5A7V646 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1337G00030 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 9.0e-09 Identity = 40/88 (45.45%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Spg028856 vs. ExPASy TrEMBL
Match: A0A5D3E4I1 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00600 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-08 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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