Spg028767 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028767
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ubiquitin-conjugating enzyme E2 variant 1B-like
Location	scaffold7: 13178520 .. 13181913 (+)
RNA-Seq Expression	Spg028767
Synteny	Spg028767

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCCAAGATTGCTGCAAAACAAATAGCCCTAAAAGGTGGAAACTCGAAGGTTGGTTATTGAAAGTGAAACCCGCCATCTGTAAGTGCCACATCCTGTTTTATAACAGCACAACAATAGAAGTGTGCTTCTATGACCTTACTTGAACAGGATCTGTTTTATAGGTATACAACCATGTCTTTGAGTTCTAAGGAGCAAGAAGTGTGCTTCTCAAAATTCTAGCTCTTTTTCATCCTCTCATGTTTCAACCCTGACTTGTTTACAATGAACCTATTCTGCAGAGCTTCTGGTTCACTGTTCTACAAGAAAAGAAAATAAAAGAAAAAAAAAAAGATTCTGGTTCGTTGACAAAGGTCCAACTCCATTTAGCTTTGAGCGTGCCTCCTTTTCCTTTGGGCAGCCTAAATGCTACCCACTTAATTAAGTCGCTTCCTCCCTCATTGTTCAAACCTTACTATAAAGACAGTCTCATTTTTGTTCCCAATCTCATAGCAACCTTAGTTGGAATTAGAAAGGGAGATAATAGATAGGAATACTGGGAAGTATCCCCACTGTGAAAAGTAATCTGACACCCTTCAGAAATTCAAGTATACCTTTAACCTGTTTGCTTAAAATTCCTTCTTCAACATGCCTTCGAAACTCATTAAAAGAAGGAACCACTCCCCAAGACATACCCAAGTAACAAAGAAGCCAGCGTGCTAAGCACAGCCCTCCATGACAGCCAATTTGCACCCTTTGAGATCTTGATTTAATTTAATTTGTATGTCCTTATTAGATCTTGGTTCTAATTATCTGTAATGAAAAGACACACCACATTTGTGTCATGTTGTGCTTTTGTTTCATAGACTTTTACATTAAACCGTGATTTCTTTTATCAGTTTTATGATACAGTCGTATTTATTGTGTGTATGTGCATATATATACACACTATCTACTCTTCTCTGAAACTTTTTGCCCTTCATCTCTCTATGGTCCACCCCCAATATGATTCTGAGTTTATCTATCTTAAACCGTTAGAGCCAGTTGCTATGGATTGCAACTTTGAAGCATATGATAGTTTTAGCATGCTAATTATATCTCTTTGCTTGACCAATTCACGAATTTTTGTTTGCAGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAAGGAATTGGGGATGGAACTGTCAGCTATGGTATGGATGATCCAGATGATTTATTAATGCAATCTTGGACTGGGACCATTATAGGCCCACCTAATGTGAGTTTCTACTTTTCAGCTTATGGGTTGGGATCTTTTTCTTGTTTGTCTGAATCTGGGGTATTCAATTCAAGGTTGAAGTTGATGTCTTTGAGTTCTCGGAGAGAATGAATTTTATTTACTCTAAGTTGCATTTTGTATGAATTTTTTGTCATGTTTGTGAAAAAAATGTATGCAAAGAAGACGCGAAGGTTTTAATTACACTGCTGCTTGGAATGTTCCAGAATTAAATAAGCTTATGGGGAGAGCTATGAGAGTTTTTAACACATTATAATTGATTTATCTTGGTCTTGTGACACTTGATAAAGATAAATGCCTTTGGTTGCCAAACTCTCTCCCCCTTTTCATCTCTCTTGATCTCTCTATTAAATAAGCACGAATATTTCTATTGTTTTTCCGTCTAATTTAATACCTTTTCAGATGCCTATAGATTTCCTCTAGCTATTTGTTTCACTTAAAGAAAATTGATGGCCTGATGTTGTGTCTTTTTAGACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCTGTTAGATTCCAAAGTAGGATAAACATGACCTGTGTTAATCCAGAAACTGGAGTGGTATGAAATATTTCTCAAGGCATCAGTAGCCATTTCATAATCGGAAATAATGTATGCTATTGCTTGCCAAAATTACCAGGTTGAAAGGAACCTTCTCCCCATGCTTGCTAAATGGCAAAGGGAATATACAATGGAGGATATATTGACTCAACTGAAGAAGGAAATGATGTCATCACAGAACCGGAAGCTGGTTCAGCCTCCCGAAGGTGCTTATTTAAATTTCCAATCAAAATTGTTCATAGAATTTGGCTAAGAGAAAAGCTTCTGTATCAAGATTATAATGATGAATTTTCTTTTCTAAATCACTTGCCCGAAGGATAAATAGTCATTTGTTCTCAACTGTTTTGTACTATTTTAAACCATTACTTCACAGCAATACTTTAATTAATCTTTTTACTGCTAGCTTGTGTATGAAGCATGCGTGGTATTCTTTTTGGTAATTTAATTATCATTTGTATATCATCTATGAGGTTTGAGATTTGTTGTTTAATGACATATTTTCAGGAAATGAAGAGGGAAGGACAGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGATTCAGGTGAGAATTTGATGCAAGATAATTGCATGACACAATGAAGTTATGATTTGGAAGATTAACATAACTGGTGATTGATCCCATAGATTCTTAAAATAATTTTTCTTTCCAGTGTGCATAGGATTTTTAAACCTGACCTCGTTGTCATGATGGGCTGTGTATTTACATGTTGACTGATTAGATCCAGAAGGTTCTATTTTCTAATTTATGTATCCATTATGCATTGCATTACATATTTCTAATTGACGTTGAACTATGACTACATACAGTAGAATTTGAACATATGGAACCAATCTCCTTCGTTCTTTACCCATGTATGTTTGTTTGTTAAATTATAAGTATAGTCTCTAAGCCTTCGGTCTGCGTCTATTTAGCACTCATACTTGAAAAAGTTTCTAATAAGTCTCGAAACTTTCTAGGTTGTGCTTAGTTAGAATTCAATTGGCCGTTGGATTTTTAATTATGTGTCTAATAGTTACGTATCATTCACTAGTCCAAAATTGGCTCTATGTAATCTTTGAATAACCCAGTAAGACTACTAGATACTTAGGCATATCCTGAAAAGTTTAGAAACCAAATTTGTAAATGATCGTCCCCGTTACCCGCATCTTCCTCTGAGCTGTGACAATAACTTTGATCTTGATGACCATAACTGCAGATTTTGGCGAAGACTGAGGCGTACAGGGAGCATCAGATTGCAGTATGCCAAAGCCTTGTGCTTTCAGTGAGCTAGCTCCGTTTATAGCTTTCTTAACATAGCAATTTGAATTTGGCAAGCTCTCAAAAAGGGAGCTTGGTTTTCTAAAGTAAATGATGTGTCTTATGTATGGATGAAATCCTGAAGATGATGAATATTCTGATATAGTCTGGTCTGTGTAAATGAATTATATATCAAAGTTTAAGGTTAAAATATTAAATGATAATGTACTTAAATATATCACTTTGGATGTGGG

mRNA sequence

ATGGGAATCCAAGATTGCTGCAAAACAAATAGCCCTAAAAGGTGGAAACTCGAAGGTTGGTTATTGAAAGTGAAACCCGCCATCTTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAAGGAATTGGGGATGGAACTGTCAGCTATGGTATGGATGATCCAGATGATTTATTAATGCAATCTTGGACTGGGACCATTATAGGCCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCTGTTAGATTCCAAAGTAGGATAAACATGACCTGTGTTAATCCAGAAACTGGAGTGGTTGAAAGGAACCTTCTCCCCATGCTTGCTAAATGGCAAAGGGAATATACAATGGAGGATATATTGACTCAACTGAAGAAGGAAATGATGTCATCACAGAACCGGAAGCTGGTTCAGCCTCCCGAAGGAAATGAAGAGGGAAGGACAGAACAAAAGGGGCTAATTTTGGCGAAGACTGAGGCGTACAGGGAGCATCAGATTGCAGTATGCCAAAGCCTTGTGCTTTCAGTGAGCTAG

Coding sequence (CDS)

ATGGGAATCCAAGATTGCTGCAAAACAAATAGCCCTAAAAGGTGGAAACTCGAAGGTTGGTTATTGAAAGTGAAACCCGCCATCTTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAAGGAATTGGGGATGGAACTGTCAGCTATGGTATGGATGATCCAGATGATTTATTAATGCAATCTTGGACTGGGACCATTATAGGCCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCTGTTAGATTCCAAAGTAGGATAAACATGACCTGTGTTAATCCAGAAACTGGAGTGGTTGAAAGGAACCTTCTCCCCATGCTTGCTAAATGGCAAAGGGAATATACAATGGAGGATATATTGACTCAACTGAAGAAGGAAATGATGTCATCACAGAACCGGAAGCTGGTTCAGCCTCCCGAAGGAAATGAAGAGGGAAGGACAGAACAAAAGGGGCTAATTTTGGCGAAGACTGAGGCGTACAGGGAGCATCAGATTGCAGTATGCCAAAGCCTTGTGCTTTCAGTGAGCTAG

Protein sequence

MGIQDCCKTNSPKRWKLEGWLLKVKPAIFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLILAKTEAYREHQIAVCQSLVLSVS

Homology

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BLAST of Spg028767 vs. NCBI nr
Match: KAG7030593.1 (Ubiquitin-conjugating enzyme E2 variant 1B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.7 bits (818), Expect = 1.7e-83
Identity = 154/165 (93.33%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYPDNPPAVRFQSRINM+CVNPETG+VERNLLPMLAKWQREYTMEDILTQLKKEMM
Sbjct: 69  FCGKDYPDNPPAVRFQSRINMSCVNPETGMVERNLLPMLAKWQREYTMEDILTQLKKEMM 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKGLILAKTEAYREHQIAVCQSLVL 193
           SS NRKLVQP EGNEEGRTEQKGLIL KTEAY+EHQIAV Q LV+
Sbjct: 129 SSHNRKLVQPLEGNEEGRTEQKGLILGKTEAYKEHQIAVWQRLVV 173

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BLAST of Spg028767 vs. NCBI nr
Match: XP_022990687.1 (ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita maxima])

HSP 1 Score: 301.2 bits (770), Expect = 6.4e-78
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYPDNPPAVRFQSRINMTCVNPETG+VERNLLPMLAKWQREYTMEDILTQLKKEMM
Sbjct: 69  FCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLKKEMM 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKGLIL 174
           SSQNRKLVQPPEGNEEGRTEQKGL+L
Sbjct: 129 SSQNRKLVQPPEGNEEGRTEQKGLVL 154

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BLAST of Spg028767 vs. NCBI nr
Match: XP_022942022.1 (ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata] >XP_023516869.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita pepo subsp. pepo] >KAG6600841.1 Ubiquitin-conjugating enzyme E2 variant 1B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031476.1 Ubiquitin-conjugating enzyme E2 variant 1B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-77
Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYPDNPPAVRFQSRINMTCVNPETG+VERNLLPMLAKWQREYTMEDILTQLKKEMM
Sbjct: 69  FCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLKKEMM 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKGLIL 174
           SSQNRKL QPPEGNEEGRTEQKGL+L
Sbjct: 129 SSQNRKLAQPPEGNEEGRTEQKGLVL 154

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BLAST of Spg028767 vs. NCBI nr
Match: XP_022157781.1 (ubiquitin-conjugating enzyme E2 variant 1B [Momordica charantia])

HSP 1 Score: 298.9 bits (764), Expect = 3.2e-77
Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYPDNPPAVRFQSRINMTCVNPETG+VERNLLPMLAKWQREYTMEDILTQLKKEM 
Sbjct: 69  FCGKDYPDNPPAVRFQSRINMTCVNPETGLVERNLLPMLAKWQREYTMEDILTQLKKEMT 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKGLIL 174
           SSQNRKLVQPPEGNEEGRTEQKGL+L
Sbjct: 129 SSQNRKLVQPPEGNEEGRTEQKGLVL 154

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BLAST of Spg028767 vs. NCBI nr
Match: XP_008464712.1 (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo] >XP_008464713.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo] >XP_038893127.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Benincasa hispida])

HSP 1 Score: 297.7 bits (761), Expect = 7.1e-77
Identity = 140/146 (95.89%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYPDNPPAVRFQSRINMTCVNPETGVVE+NLLPMLAKWQREYTMEDILTQLKKEMM
Sbjct: 69  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMM 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKGLIL 174
           SS NRKL QPPEGNEEGRTEQKGL+L
Sbjct: 129 SSHNRKLAQPPEGNEEGRTEQKGLVL 154

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BLAST of Spg028767 vs. ExPASy Swiss-Prot
Match: Q9CAB6 (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UEV1B PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.9e-65
Identity = 114/146 (78.08%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYP++PP VRFQSRINM CVNPE GVV+ +  PML+ W+RE+TMED+L QLKKEMM
Sbjct: 69  FCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMM 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKGLIL 174
           SSQNRKL QP EGNEEGRT+ KGL++
Sbjct: 129 SSQNRKLAQPLEGNEEGRTDPKGLVV 154

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BLAST of Spg028767 vs. ExPASy Swiss-Prot
Match: Q93YP0 (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UEV1A PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 8.5e-65
Identity = 112/143 (78.32%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +EG+I+QLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGK+YP++PP VRFQ+RINM CVNPETGVVE +L PML  W+REYTMEDIL +LKKEMM
Sbjct: 69  FCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMM 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKG 171
           +S NRKL QPPEGNEE R + KG
Sbjct: 129 TSHNRKLAQPPEGNEEARADPKG 151

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BLAST of Spg028767 vs. ExPASy Swiss-Prot
Match: Q9SJ44 (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UEV1C PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.4e-59
Identity = 107/133 (80.45%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIYQLKL
Sbjct: 10  VVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKL 69

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FC KDYP+ PP VRF SRINMTCVN +TGVV+     +LA WQR+YTMEDILTQLKKEM 
Sbjct: 70  FCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKEMA 129

Query: 148 SSQNRKLVQPPEG 161
           +S NRKLVQPPEG
Sbjct: 130 ASHNRKLVQPPEG 142

[Close]

BLAST of Spg028767 vs. ExPASy Swiss-Prot
Match: Q9SVD7 (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UEV1D PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 9.1e-59
Identity = 106/133 (79.70%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIYQLKL
Sbjct: 11  VVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKL 70

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FC KDYP+ PP VRF SR+NM CVN ETGVV+     +LA WQREYTMEDIL QLKKEM 
Sbjct: 71  FCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLKKEMS 130

Query: 148 SSQNRKLVQPPEG 161
           +S NRKLVQPPEG
Sbjct: 131 TSHNRKLVQPPEG 143

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BLAST of Spg028767 vs. ExPASy Swiss-Prot
Match: Q54D06 (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=44689 GN=ube2v PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.3e-43
Identity = 77/131 (58.78%), Postives = 101/131 (77.10%), Query Frame = 0


Query: 30  PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFC 89
           PRNF LLEELE GEK  GDGT+SYG++ PDD+L+ SW GTIIGP NT  + R Y LKL+C
Sbjct: 5   PRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLYC 64

Query: 90  GKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMMSS 149
            KDYP+ PP VRF ++IN+ CVN + GVV+   LP+L+ W  +  +++IL++L++EM SS
Sbjct: 65  DKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREMSSS 124

Query: 150 QNRKLVQPPEG 161
            N+KLVQPPEG
Sbjct: 125 SNKKLVQPPEG 135

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BLAST of Spg028767 vs. ExPASy TrEMBL
Match: A0A6J1JJH8 (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111487499 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.1e-78
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYPDNPPAVRFQSRINMTCVNPETG+VERNLLPMLAKWQREYTMEDILTQLKKEMM
Sbjct: 69  FCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLKKEMM 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKGLIL 174
           SSQNRKLVQPPEGNEEGRTEQKGL+L
Sbjct: 129 SSQNRKLVQPPEGNEEGRTEQKGLVL 154

[Close]

BLAST of Spg028767 vs. ExPASy TrEMBL
Match: A0A6J1FP33 (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111447210 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 9.1e-78
Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYPDNPPAVRFQSRINMTCVNPETG+VERNLLPMLAKWQREYTMEDILTQLKKEMM
Sbjct: 69  FCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLKKEMM 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKGLIL 174
           SSQNRKL QPPEGNEEGRTEQKGL+L
Sbjct: 129 SSQNRKLAQPPEGNEEGRTEQKGLVL 154

[Close]

BLAST of Spg028767 vs. ExPASy TrEMBL
Match: A0A6J1DZ79 (ubiquitin-conjugating enzyme E2 variant 1B OS=Momordica charantia OX=3673 GN=LOC111024402 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.5e-77
Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYPDNPPAVRFQSRINMTCVNPETG+VERNLLPMLAKWQREYTMEDILTQLKKEM 
Sbjct: 69  FCGKDYPDNPPAVRFQSRINMTCVNPETGLVERNLLPMLAKWQREYTMEDILTQLKKEMT 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKGLIL 174
           SSQNRKLVQPPEGNEEGRTEQKGL+L
Sbjct: 129 SSQNRKLVQPPEGNEEGRTEQKGLVL 154

[Close]

BLAST of Spg028767 vs. ExPASy TrEMBL
Match: A0A1S3CM86 (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucumis melo OX=3656 GN=LOC103502532 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.4e-77
Identity = 140/146 (95.89%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYPDNPPAVRFQSRINMTCVNPETGVVE+NLLPMLAKWQREYTMEDILTQLKKEMM
Sbjct: 69  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMM 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKGLIL 174
           SS NRKL QPPEGNEEGRTEQKGL+L
Sbjct: 129 SSHNRKLAQPPEGNEEGRTEQKGLVL 154

[Close]

BLAST of Spg028767 vs. ExPASy TrEMBL
Match: A0A5A7THA9 (Ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00280 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.7e-77
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 30  PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFC 89
           PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFC
Sbjct: 17  PRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFC 76

Query: 90  GKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMMSS 149
           GKDYPDNPPAVRFQSRINMTCVNPETGVVE+NLLPMLAKWQREYTMEDILTQLKKEMMSS
Sbjct: 77  GKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMSS 136

Query: 150 QNRKLVQPPEGNEEGRTEQKGLIL 174
            NRKL QPPEGNEEGRTEQKGL+L
Sbjct: 137 HNRKLAQPPEGNEEGRTEQKGLVL 160

[Close]

BLAST of Spg028767 vs. TAIR 10
Match: AT1G70660.1 (MMS ZWEI homologue 2 )

HSP 1 Score: 249.6 bits (636), Expect = 2.1e-66
Identity = 114/146 (78.08%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYP++PP VRFQSRINM CVNPE GVV+ +  PML+ W+RE+TMED+L QLKKEMM
Sbjct: 69  FCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMM 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKGLIL 174
           SSQNRKL QP EGNEEGRT+ KGL++
Sbjct: 129 SSQNRKLAQPLEGNEEGRTDPKGLVV 154

[Close]

BLAST of Spg028767 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 249.2 bits (635), Expect = 2.7e-66
Identity = 114/146 (78.08%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKL
Sbjct: 445 LVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKL 504

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYP++PP VRFQSRINM CVNPE GVV+ +  PML+ W+RE+TMED+L QLKKEMM
Sbjct: 505 FCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMM 564

Query: 148 SSQNRKLVQPPEGNEEGRTEQKGLIL 174
           SSQNRKL QP EGNEEGRT+ KGL++
Sbjct: 565 SSQNRKLAQPLEGNEEGRTDPKGLVV 590

[Close]

BLAST of Spg028767 vs. TAIR 10
Match: AT1G23260.1 (MMS ZWEI homologue 1 )

HSP 1 Score: 248.1 bits (632), Expect = 6.0e-66
Identity = 112/143 (78.32%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +EG+I+QLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGK+YP++PP VRFQ+RINM CVNPETGVVE +L PML  W+REYTMEDIL +LKKEMM
Sbjct: 69  FCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMM 128

Query: 148 SSQNRKLVQPPEGNEEGRTEQKG 171
           +S NRKL QPPEGNEE R + KG
Sbjct: 129 TSHNRKLAQPPEGNEEARADPKG 151

[Close]

BLAST of Spg028767 vs. TAIR 10
Match: AT1G70660.2 (MMS ZWEI homologue 2 )

HSP 1 Score: 236.1 bits (601), Expect = 2.4e-62
Identity = 108/136 (79.41%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKL
Sbjct: 9   VVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKL 68

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FCGKDYP++PP VRFQSRINM CVNPE GVV+ +  PML+ W+RE+TMED+L QLKKEMM
Sbjct: 69  FCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMM 128

Query: 148 SSQNRKLVQPPEGNEE 164
           SSQNRKL QP EGNEE
Sbjct: 129 SSQNRKLAQPLEGNEE 144

[Close]

BLAST of Spg028767 vs. TAIR 10
Match: AT2G36060.1 (MMS ZWEI homologue 3 )

HSP 1 Score: 229.9 bits (585), Expect = 1.7e-60
Identity = 107/133 (80.45%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 28  IFPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKL 87
           + PRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIYQLKL
Sbjct: 10  VVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKL 69

Query: 88  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVERNLLPMLAKWQREYTMEDILTQLKKEMM 147
           FC KDYP+ PP VRF SRINMTCVN +TGVV+     +LA WQR+YTMEDILTQLKKEM 
Sbjct: 70  FCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKEMA 129

Query: 148 SSQNRKLVQPPEG 161
           +S NRKLVQPPEG
Sbjct: 130 ASHNRKLVQPPEG 142

The following BLAST results are available for this feature:

BLAST of Spg028767 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030593.1	1.7e-83	93.33	Ubiquitin-conjugating enzyme E2 variant 1B [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022990687.1	6.4e-78	97.26	ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita maxima]	[more]
XP_022942022.1	1.9e-77	96.58	ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata] >XP_0235168...	[more]
XP_022157781.1	3.2e-77	96.58	ubiquitin-conjugating enzyme E2 variant 1B [Momordica charantia]	[more]
XP_008464712.1	7.1e-77	95.89	PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo] >XP_00...	[more]

BLAST of Spg028767 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAB6	2.9e-65	78.08	Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
Q93YP0	8.5e-65	78.32	Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
Q9SJ44	2.4e-59	80.45	Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
Q9SVD7	9.1e-59	79.70	Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
Q54D06	5.3e-43	58.78	Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=...	[more]

BLAST of Spg028767 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JJH8	3.1e-78	97.26	ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FP33	9.1e-78	96.58	ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1DZ79	1.5e-77	96.58	ubiquitin-conjugating enzyme E2 variant 1B OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A1S3CM86	3.4e-77	95.89	ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7THA9	7.7e-77	97.22	Ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Spg028767 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70660.1	2.1e-66	78.08	MMS ZWEI homologue 2	[more]
AT1G70650.2	2.7e-66	78.08	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G23260.1	6.0e-66	78.32	MMS ZWEI homologue 1	[more]
AT1G70660.2	2.4e-62	79.41	MMS ZWEI homologue 2	[more]
AT2G36060.1	1.7e-60	80.45	MMS ZWEI homologue 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 33..184 e-value: 6.5E-21 score: 85.5
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 27..163
None	No IPR available	PANTHER	PTHR24068:SF344	UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE	coord: 27..163
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 61..150 e-value: 3.4E-15 score: 55.9
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 30..185 score: 33.085918
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 20..163 e-value: 2.3E-41 score: 142.7
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 29..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028767.1	Spg028767.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006301	postreplication repair
biological_process	GO:0070534	protein K63-linked ubiquitination
cellular_component	GO:0005634	nucleus