Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCGATTCCAAAAAGAAGCCACAATAAAGGGATCCCAAGAAAAATATAATTCCATTGAAGATGAGAACGAAGGCTTGACCCTTGTCATTTGTCGCAAAAAGAAAAAGCAAAGTTACGCACGGAAAGAGTCCCGCCTATTTCGAGATAGTAAAAGAAAAGTTAAGTCTCAAAGGAAGAAGGGAAAAAAGAAATCAAGGAGGTCAAAGCATGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATGGTCAAGGAAAAGCACTTGAAACTATCACGTGTCACATTGTGGACGTGGTGGAAGATGATGACGTCCCTGCTAACTCCTCGGGAACGGTGGCAGGTTTAGGAGACTTATCCTCCTTCAGCATAAAGGACTTACTGTCACTTCCTCAGGTAGCTAAAAGCGTCCTTATTAATGCATTGATAGAGTCTGATGGTACAAACATCCCAACCTCCGAGGCACGCACATGTGCTTCGTGTTGCATGTCTATCAGATTTTATGATGAAGATTTGCTGCTAGGGTCAAAGCCTCACAATAGACCTTTATTCGTGTCAAGATACATTCGAGAACAGAGGGTTAGTTGGATCCTCATCGATGATGGATCAGCTGTCAATATAATGCCTAAGTCAACCATGAAGCAATTAGGCATCTTGATGGAGGAACTATCAAACAGTAAATTGGTGATCCAAGGTTTCAATCAAGGTGGACAACGGGCGATTGGCATGATACGCCTTGAGCTCATCATTGGAGACTTAAAAGCTGATACTTTGTTCCACGTAATAGATTCTATTGTTAGGTCGTCCTTGGATCCATGGTAATGGAGTCATAACCTCTACATTGCACCAGTGTTTTAAATTCTATCAAGATGGCATCAAGAAAGTTGAAGCTGACATTAACCCATTTTCAGAGGCTGAGTCTCATTTCGCTGTTGCAAAGTTTTATCTGAAGAATGAAAACACAGGGGAAACCATACCTACAGAAATCCCCTTGATAAAAAAGAATGATAAACTCGATTTGGAGCCACAGGCAGATGCAAGAAAGGAAGTTGTTGAAGATGTGAATACTTCCGACCCGAAAAAGGGTGAAACATCAACAAGCCTTGTGAAACCTAAGGTTGTAAAAGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCCTTATCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTTTAGATAGCATAAAGGTCGGTGACGTTGAAATTTTGAAGGAAAGTTTCACTACACCTCATACAAAGATCACAAAGCAAGAGGTTAAGAAACTTGAGGATGACCAGATAAAAACGATTTTGCCTGACAAACGAACTAAAGACGGGTTCGACCCCAAGGCATACAAACTTCTAGCGAAAGCAGGTTATGACTTCACAACTCACACTGAGTTTAAAAGTCTAAGGGTTTTTTATGAAAGATCTGAACTCTCTACAACACAGAAGAAGCTTCTAAGGGAAGGCTATAGTCTGCCTACGACGAGAAAAGGACTTGGATATAAGTCGCCCGAACCAGTTCGCATAACAAGAAAAGGGAAGGCGAAAGTGGCAGACATAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAGAAGAGAGCGTCGACCAACGAGCTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTCAGTCTTTCAGAGGATAATTGTGAATGAAACAGAAGAAGAAAGTACACAACCTACTAATAGCTCCACTCGATCTTCAGTTTTTCGAAGGTTAAGTATGTTCATTGGGGAAGAAGAGAGTACACTTTCAACTCCGGATGTCACGCGTCCTTCAGCTTTTCAAAGGTTAAATATGTCCGTTGGGGAAGAAGAGAATACACTTTCAACTCCGGATGTCACGCGACCTTCAGCTTTTCGAAGGTTAAATATGCCCGTTGGGGAAGAAGAG
mRNA sequence
GTTCGATTCCAAAAAGAAGCCACAATAAAGGGATCCCAAGAAAAATATAATTCCATTGAAGATGAGAACGAAGGCTTGACCCTTGTCATTTGTCGCAAAAAGAAAAAGCAAAGTTACGCACGGAAAGAGTCCCGCCTATTTCGAGATAGTAAAAGAAAAGTTAAGTCTCAAAGGAAGAAGGGAAAAAAGAAATCAAGGAGGTCAAAGCATGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATGGTCAAGGAAAAGCACTTGAAACTATCACGTGTCACATTGTGGACGTGGTGGAAGATGATGACGTCCCTGCTAACTCCTCGGGAACGGTGGCAGGTTTAGGAGACTTATCCTCCTTCAGCATAAAGGACTTACTGTCACTTCCTCAGGCAGATGCAAGAAAGGAAGTTGTTGAAGATGTGAATACTTCCGACCCGAAAAAGGGTGAAACATCAACAAGCCTTGTGAAACCTAAGGTTGTAAAAGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCCTTATCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTTTAGATAGCATAAAGAAGAAGCTTCTAAGGGAAGGCTATAGTCTGCCTACGACGAGAAAAGGACTTGGATATAAGTCGCCCGAACCAGTTCGCATAACAAGAAAAGGGAAGGCGAAAGTGGCAGACATAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAGAAGAGAGCGTCGACCAACGAGCTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTCAGTCTTTCAGAGGATAATTGTGAATGAAACAGAAGAAGAAAGTACACAACCTACTAATAGCTCCACTCGATCTTCAGTTTTTCGAAGGTTAAGTATGTTCATTGGGGAAGAAGAGAGTACACTTTCAACTCCGGATGTCACGCGTCCTTCAGCTTTTCAAAGGTTAAATATGTCCGTTGGGGAAGAAGAGAATACACTTTCAACTCCGGATGTCACGCGACCTTCAGCTTTTCGAAGGTTAAATATGCCCGTTGGGGAAGAAGAG
Coding sequence (CDS)
GTTCGATTCCAAAAAGAAGCCACAATAAAGGGATCCCAAGAAAAATATAATTCCATTGAAGATGAGAACGAAGGCTTGACCCTTGTCATTTGTCGCAAAAAGAAAAAGCAAAGTTACGCACGGAAAGAGTCCCGCCTATTTCGAGATAGTAAAAGAAAAGTTAAGTCTCAAAGGAAGAAGGGAAAAAAGAAATCAAGGAGGTCAAAGCATGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATGGTCAAGGAAAAGCACTTGAAACTATCACGTGTCACATTGTGGACGTGGTGGAAGATGATGACGTCCCTGCTAACTCCTCGGGAACGGTGGCAGGTTTAGGAGACTTATCCTCCTTCAGCATAAAGGACTTACTGTCACTTCCTCAGGCAGATGCAAGAAAGGAAGTTGTTGAAGATGTGAATACTTCCGACCCGAAAAAGGGTGAAACATCAACAAGCCTTGTGAAACCTAAGGTTGTAAAAGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCCTTATCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTTTAGATAGCATAAAGAAGAAGCTTCTAAGGGAAGGCTATAGTCTGCCTACGACGAGAAAAGGACTTGGATATAAGTCGCCCGAACCAGTTCGCATAACAAGAAAAGGGAAGGCGAAAGTGGCAGACATAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAGAAGAGAGCGTCGACCAACGAGCTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTCAGTCTTTCAGAGGATAATTGTGAATGAAACAGAAGAAGAAAGTACACAACCTACTAATAGCTCCACTCGATCTTCAGTTTTTCGAAGGTTAAGTATGTTCATTGGGGAAGAAGAGAGTACACTTTCAACTCCGGATGTCACGCGTCCTTCAGCTTTTCAAAGGTTAAATATGTCCGTTGGGGAAGAAGAGAATACACTTTCAACTCCGGATGTCACGCGACCTTCAGCTTTTCGAAGGTTAAATATGCCCGTTGGGGAAGAAGAG
Protein sequence
VRFQKEATIKGSQEKYNSIEDENEGLTLVICRKKKKQSYARKESRLFRDSKRKVKSQRKKGKKKSRRSKHVVEESEDFFCPPQPITLAEYFPRRFLDDGQGKALETITCHIVDVVEDDDVPANSSGTVAGLGDLSSFSIKDLLSLPQADARKEVVEDVNTSDPKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECLDSIKKKLLREGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNETEEESTQPTNSSTRSSVFRRLSMFIGEEESTLSTPDVTRPSAFQRLNMSVGEEENTLSTPDVTRPSAFRRLNMPVGEEE
Homology
BLAST of Spg028684 vs. NCBI nr
Match:
KAA0055957.1 (uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa])
HSP 1 Score: 179.9 bits (455), Expect = 4.1e-41
Identity = 109/252 (43.25%), Postives = 141/252 (55.95%), Query Frame = 0
Query: 150 ARKEVVEDVNTSDPKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-- 209
A KE + + T K E ST+ K ++ DEK SN PILRYVPLSRRKKGESPF E
Sbjct: 188 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 247
Query: 210 -----------------------------------------LDSIKKKLLREGYSLPTTR 269
L S +KKLLREG+ +P +R
Sbjct: 248 GLKRRTKDGFDPKAYKLMAKAGYDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSR 307
Query: 270 KGLGYKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASV 329
KGLGYKSPEP+RITRKGK KV D NHITV+EVD +E+E +QR S F RI P VARA V
Sbjct: 308 KGLGYKSPEPIRITRKGKKKVVDNNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPV 367
Query: 330 FQRIIVNETEEESTQPTNSSTRSSVFRRLSMFIGEEESTLSTPDVTRPSAFQRLNMSVGE 359
F+R+ + E + + Q T++ R S F+RL++ EE+ T T+PSAF+RL+++ +
Sbjct: 368 FERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEKGICQTSMTTKPSAFERLSITKKK 427
BLAST of Spg028684 vs. NCBI nr
Match:
KAA0061113.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 178.7 bits (452), Expect = 9.2e-41
Identity = 159/490 (32.45%), Postives = 215/490 (43.88%), Query Frame = 0
Query: 4 QKEATIKGSQEKYNSIEDENEGLTLVICRKKKKQSYARKESRLFRDSKRKVKSQRKKGKK 63
++E T + SQEK IE+++EG T+V RKK+K + +KESRL+ + +R K+Q+ K KK
Sbjct: 459 EEEVTPEDSQEKERLIEEDDEGWTVVTRRKKRKSTLIQKESRLYINYRRGNKTQKNKKKK 518
Query: 64 KSRRSKHVVEESEDFFCPPQPITLAEYFPRRFLDDGQGKALETIT--------------- 123
K+R+ K V E+ +DF + +TLA++FP RFL D Q + +
Sbjct: 519 KTRKLKLVHEKDKDFPRTQRVVTLADFFPTRFLGDHQDENPGVVASASSSSAPIATYEST 578
Query: 124 --CHIVDVVEDD--------DVPANSSG------------------------TVAGLGDL 183
C +D ++D + P SG T+ LG L
Sbjct: 579 PYCMSIDFSDEDLLLGSKLHNRPLYVSGYVQEQRVERILVDNGSAVNIMPKSTMRQLGIL 638
Query: 184 -----------------------SSFSIK------------------DLLSLPQADARKE 243
+ F +K D L L ++ A +E
Sbjct: 639 MEELSNSKLVIQGFNQGSQRVIDAKFYLKNDGSPEVVSVEVPLVNKEDNLQL-KSLASRE 698
Query: 244 VVEDVNTSDPKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC------ 303
+ T K E STS K +V DEK SN PILRYVPLSRRKKGESPF E
Sbjct: 699 SHKSTGTFHSGKSEASTSTAKSVIVMDEKTSNPPILRYVPLSRRKKGESPFVEFPQGLKV 758
Query: 304 ------------------------------------------------------------ 327
Sbjct: 759 GDIEVLKESFTTPLTKITKQEIKIDLIEASLPQRRTKDGFDPKAYKSMAKAGYDFTTHTE 818
BLAST of Spg028684 vs. NCBI nr
Match:
KAA0043405.1 (hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa])
HSP 1 Score: 176.8 bits (447), Expect = 3.5e-40
Identity = 104/222 (46.85%), Postives = 136/222 (61.26%), Query Frame = 0
Query: 150 ARKEVVEDVNTSDPKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-- 209
A KE + + T +KGE STS K ++ DEK SN ILRYVPLSRR+KGESPF +
Sbjct: 56 ASKEPHKSIGTFHSRKGEASTSTTKSMILMDEKTSNPLILRYVPLSRRQKGESPFVKFPQ 115
Query: 210 -----------LDSIKKKLLREGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVE 269
L I+KKLLREG+ +P +RKG GYKSPEP+ I RK K KV D NHITV
Sbjct: 116 GLKVGDMKQPKLSLIQKKLLREGHVIPVSRKGPGYKSPEPIHIIRKRKKKVIDSNHITVG 175
Query: 270 EVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNETEEESTQPTNSSTRSSVFRRLS 329
EVD +E+E QR S F +IRP V R +VF+R+ V +TE + Q T+S + S +RL+
Sbjct: 176 EVDSMEEKEGGSQRISAFDQIRPHVVRTTVFERLSVTKTERKCHQSTSSLNKRSALQRLT 235
Query: 330 MFIGEEESTLSTPDVTRPSAFQRLNMSVGEEENTLSTPDVTR 359
M +E+ T TRPSAF+RL+++ ++ T P R
Sbjct: 236 MTFKKEKCTCQALRATRPSAFERLSVAKQKDAQTPRVPIFNR 277
BLAST of Spg028684 vs. NCBI nr
Match:
TYK05005.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 176.8 bits (447), Expect = 3.5e-40
Identity = 163/572 (28.50%), Postives = 216/572 (37.76%), Query Frame = 0
Query: 1 VRFQKEATIKGSQEKYNSIEDENEGLTLVICRKKKKQSYARKESRLFRDSKRKVKSQRKK 60
VRF +E + SQEK IE+++E T+V RKK+K + +KE R +R+ +R K+Q+ K
Sbjct: 352 VRFHQEVAPEDSQEKERLIEEDDERWTIVTRRKKRKSTPIQKEHRFYRNYRRWNKAQKNK 411
Query: 61 GKKKSRRSKHVVEESEDFFCPPQPITLAEYFPRRFLDDGQGKALETITCHIVDVVEDDDV 120
KKK+R+ K + +E +DF + ITLA++FP RFL D Q + + CH ++ E++ +
Sbjct: 412 KKKKTRKLKLMHKEDKDFPRTQRLITLADFFPTRFLGDHQDENPGVVACHAINATEEESI 471
Query: 121 PANSSGTVAGLGDLSSFSIKDLLSLPQ--------------------------------- 180
P S DLS F++ DLLSLPQ
Sbjct: 472 PLRSLEEEKVSKDLSRFNVDDLLSLPQEIKTILINALLNSAASSSSASTVTYESTPYCMS 531
Query: 181 ------------------------------------------------------------ 240
Sbjct: 532 IDFSNDDLLLGSKLHNRPLYVSGYVREQRVDRILVDNGSAVNIMPKSTIRQLGILMKELS 591
Query: 241 -------------------------------------ADAR------------------- 300
ADA+
Sbjct: 592 NSKLVIQGFNQGSQRVIDGVKKVEADSNPFSEAESHFADAKFYLKNDSSPEVVSVEVPLV 651
Query: 301 -------------KEVVEDVNTSDPKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRK 334
KE + T +K E STS K ++ DEK SN ILRYVPLSRRK
Sbjct: 652 NREDNLQLKSLASKEPHISIGTFHSEKSEASTSTAKSVILMDEKTSNPSILRYVPLSRRK 711
BLAST of Spg028684 vs. NCBI nr
Match:
TYK28162.1 (uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa])
HSP 1 Score: 176.4 bits (446), Expect = 4.6e-40
Identity = 109/262 (41.60%), Postives = 141/262 (53.82%), Query Frame = 0
Query: 150 ARKEVVEDVNTSDPKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-- 209
A KE + + T K E ST+ K ++ DEK SN PILRYVPLSRRKKGESPF E
Sbjct: 152 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 211
Query: 210 ---------------------------------------------------LDSIKKKLL 269
L S +KKLL
Sbjct: 212 GLKIDLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLL 271
Query: 270 REGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESVDQRASVFRR 329
REG+ +P +RKGLGYKSPEP+RITRKGK KV D NHITV+EVD +E+E +QR S F R
Sbjct: 272 REGHVIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEKEGDNQRTSTFDR 331
Query: 330 IRPPVARASVFQRIIVNETEEESTQPTNSSTRSSVFRRLSMFIGEEESTLSTPDVTRPSA 359
I P VARA VF+R+ + E E + Q T++ + S F+RL++ EE+ T T+PSA
Sbjct: 332 ISPHVARAPVFERLSMTEAERKDHQSTSNLDQRSAFQRLTITFKEEKGICQTSMTTKPSA 391
BLAST of Spg028684 vs. ExPASy TrEMBL
Match:
A0A5A7UMY2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00830 PE=4 SV=1)
HSP 1 Score: 179.9 bits (455), Expect = 2.0e-41
Identity = 109/252 (43.25%), Postives = 141/252 (55.95%), Query Frame = 0
Query: 150 ARKEVVEDVNTSDPKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-- 209
A KE + + T K E ST+ K ++ DEK SN PILRYVPLSRRKKGESPF E
Sbjct: 188 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 247
Query: 210 -----------------------------------------LDSIKKKLLREGYSLPTTR 269
L S +KKLLREG+ +P +R
Sbjct: 248 GLKRRTKDGFDPKAYKLMAKAGYDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSR 307
Query: 270 KGLGYKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASV 329
KGLGYKSPEP+RITRKGK KV D NHITV+EVD +E+E +QR S F RI P VARA V
Sbjct: 308 KGLGYKSPEPIRITRKGKKKVVDNNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPV 367
Query: 330 FQRIIVNETEEESTQPTNSSTRSSVFRRLSMFIGEEESTLSTPDVTRPSAFQRLNMSVGE 359
F+R+ + E + + Q T++ R S F+RL++ EE+ T T+PSAF+RL+++ +
Sbjct: 368 FERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEKGICQTSMTTKPSAFERLSITKKK 427
BLAST of Spg028684 vs. ExPASy TrEMBL
Match:
A0A5D3BY54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001700 PE=4 SV=1)
HSP 1 Score: 178.7 bits (452), Expect = 4.5e-41
Identity = 159/490 (32.45%), Postives = 215/490 (43.88%), Query Frame = 0
Query: 4 QKEATIKGSQEKYNSIEDENEGLTLVICRKKKKQSYARKESRLFRDSKRKVKSQRKKGKK 63
++E T + SQEK IE+++EG T+V RKK+K + +KESRL+ + +R K+Q+ K KK
Sbjct: 459 EEEVTPEDSQEKERLIEEDDEGWTVVTRRKKRKSTLIQKESRLYINYRRGNKTQKNKKKK 518
Query: 64 KSRRSKHVVEESEDFFCPPQPITLAEYFPRRFLDDGQGKALETIT--------------- 123
K+R+ K V E+ +DF + +TLA++FP RFL D Q + +
Sbjct: 519 KTRKLKLVHEKDKDFPRTQRVVTLADFFPTRFLGDHQDENPGVVASASSSSAPIATYEST 578
Query: 124 --CHIVDVVEDD--------DVPANSSG------------------------TVAGLGDL 183
C +D ++D + P SG T+ LG L
Sbjct: 579 PYCMSIDFSDEDLLLGSKLHNRPLYVSGYVQEQRVERILVDNGSAVNIMPKSTMRQLGIL 638
Query: 184 -----------------------SSFSIK------------------DLLSLPQADARKE 243
+ F +K D L L ++ A +E
Sbjct: 639 MEELSNSKLVIQGFNQGSQRVIDAKFYLKNDGSPEVVSVEVPLVNKEDNLQL-KSLASRE 698
Query: 244 VVEDVNTSDPKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC------ 303
+ T K E STS K +V DEK SN PILRYVPLSRRKKGESPF E
Sbjct: 699 SHKSTGTFHSGKSEASTSTAKSVIVMDEKTSNPPILRYVPLSRRKKGESPFVEFPQGLKV 758
Query: 304 ------------------------------------------------------------ 327
Sbjct: 759 GDIEVLKESFTTPLTKITKQEIKIDLIEASLPQRRTKDGFDPKAYKSMAKAGYDFTTHTE 818
BLAST of Spg028684 vs. ExPASy TrEMBL
Match:
A0A5D3C0W6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002360 PE=4 SV=1)
HSP 1 Score: 176.8 bits (447), Expect = 1.7e-40
Identity = 163/572 (28.50%), Postives = 216/572 (37.76%), Query Frame = 0
Query: 1 VRFQKEATIKGSQEKYNSIEDENEGLTLVICRKKKKQSYARKESRLFRDSKRKVKSQRKK 60
VRF +E + SQEK IE+++E T+V RKK+K + +KE R +R+ +R K+Q+ K
Sbjct: 352 VRFHQEVAPEDSQEKERLIEEDDERWTIVTRRKKRKSTPIQKEHRFYRNYRRWNKAQKNK 411
Query: 61 GKKKSRRSKHVVEESEDFFCPPQPITLAEYFPRRFLDDGQGKALETITCHIVDVVEDDDV 120
KKK+R+ K + +E +DF + ITLA++FP RFL D Q + + CH ++ E++ +
Sbjct: 412 KKKKTRKLKLMHKEDKDFPRTQRLITLADFFPTRFLGDHQDENPGVVACHAINATEEESI 471
Query: 121 PANSSGTVAGLGDLSSFSIKDLLSLPQ--------------------------------- 180
P S DLS F++ DLLSLPQ
Sbjct: 472 PLRSLEEEKVSKDLSRFNVDDLLSLPQEIKTILINALLNSAASSSSASTVTYESTPYCMS 531
Query: 181 ------------------------------------------------------------ 240
Sbjct: 532 IDFSNDDLLLGSKLHNRPLYVSGYVREQRVDRILVDNGSAVNIMPKSTIRQLGILMKELS 591
Query: 241 -------------------------------------ADAR------------------- 300
ADA+
Sbjct: 592 NSKLVIQGFNQGSQRVIDGVKKVEADSNPFSEAESHFADAKFYLKNDSSPEVVSVEVPLV 651
Query: 301 -------------KEVVEDVNTSDPKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRK 334
KE + T +K E STS K ++ DEK SN ILRYVPLSRRK
Sbjct: 652 NREDNLQLKSLASKEPHISIGTFHSEKSEASTSTAKSVILMDEKTSNPSILRYVPLSRRK 711
BLAST of Spg028684 vs. ExPASy TrEMBL
Match:
A0A5A7TPR5 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00040 PE=4 SV=1)
HSP 1 Score: 176.8 bits (447), Expect = 1.7e-40
Identity = 104/222 (46.85%), Postives = 136/222 (61.26%), Query Frame = 0
Query: 150 ARKEVVEDVNTSDPKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-- 209
A KE + + T +KGE STS K ++ DEK SN ILRYVPLSRR+KGESPF +
Sbjct: 56 ASKEPHKSIGTFHSRKGEASTSTTKSMILMDEKTSNPLILRYVPLSRRQKGESPFVKFPQ 115
Query: 210 -----------LDSIKKKLLREGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVE 269
L I+KKLLREG+ +P +RKG GYKSPEP+ I RK K KV D NHITV
Sbjct: 116 GLKVGDMKQPKLSLIQKKLLREGHVIPVSRKGPGYKSPEPIHIIRKRKKKVIDSNHITVG 175
Query: 270 EVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNETEEESTQPTNSSTRSSVFRRLS 329
EVD +E+E QR S F +IRP V R +VF+R+ V +TE + Q T+S + S +RL+
Sbjct: 176 EVDSMEEKEGGSQRISAFDQIRPHVVRTTVFERLSVTKTERKCHQSTSSLNKRSALQRLT 235
Query: 330 MFIGEEESTLSTPDVTRPSAFQRLNMSVGEEENTLSTPDVTR 359
M +E+ T TRPSAF+RL+++ ++ T P R
Sbjct: 236 MTFKKEKCTCQALRATRPSAFERLSVAKQKDAQTPRVPIFNR 277
BLAST of Spg028684 vs. ExPASy TrEMBL
Match:
A0A5D3DXC7 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00760 PE=4 SV=1)
HSP 1 Score: 176.4 bits (446), Expect = 2.2e-40
Identity = 109/262 (41.60%), Postives = 141/262 (53.82%), Query Frame = 0
Query: 150 ARKEVVEDVNTSDPKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-- 209
A KE + + T K E ST+ K ++ DEK SN PILRYVPLSRRKKGESPF E
Sbjct: 152 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 211
Query: 210 ---------------------------------------------------LDSIKKKLL 269
L S +KKLL
Sbjct: 212 GLKIDLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLL 271
Query: 270 REGYSLPTTRKGLGYKSPEPVRITRKGKAKVADINHITVEEVDDSKEEESVDQRASVFRR 329
REG+ +P +RKGLGYKSPEP+RITRKGK KV D NHITV+EVD +E+E +QR S F R
Sbjct: 272 REGHVIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEKEGDNQRTSTFDR 331
Query: 330 IRPPVARASVFQRIIVNETEEESTQPTNSSTRSSVFRRLSMFIGEEESTLSTPDVTRPSA 359
I P VARA VF+R+ + E E + Q T++ + S F+RL++ EE+ T T+PSA
Sbjct: 332 ISPHVARAPVFERLSMTEAERKDHQSTSNLDQRSAFQRLTITFKEEKGICQTSMTTKPSA 391
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0055957.1 | 4.1e-41 | 43.25 | uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa] | [more] |
| KAA0061113.1 | 9.2e-41 | 32.45 | ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gyp... | [more] |
| KAA0043405.1 | 3.5e-40 | 46.85 | hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa] | [more] |
| TYK05005.1 | 3.5e-40 | 28.50 | ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
| TYK28162.1 | 4.6e-40 | 41.60 | uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UMY2 | 2.0e-41 | 43.25 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
| A0A5D3BY54 | 4.5e-41 | 32.45 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5D3C0W6 | 1.7e-40 | 28.50 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5A7TPR5 | 1.7e-40 | 46.85 | RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| A0A5D3DXC7 | 2.2e-40 | 41.60 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
