Spg028649 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028649
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold7: 16129118 .. 16131099 (-)
RNA-Seq Expression	Spg028649
Synteny	Spg028649

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCCGAACGTATTCGAAGGAATAATTCGCCAACCAGTGGCAAAGGCTCTTGCGATTGCTGAAGGGTACAAGGCTGAACAGGATGCTTTGAAAGAGGTTGAGACTGAGAGAGAGATGGAAAATCAGAAAATGGTTGAGGAAGACGAGTTTGCAAAGGAAAGAGATCGTGAAGAAGAGAAAAGAAGGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAAGAAGAAAGAAAATATGAGGAAAACCTCAGGAGGGCAGCCATTGATTTGCAGCTCCTTGAGGAAGAGAAAAAGAAAAGGGAAGAAATAAAAGAAGATGAGAAAAGAAGGAAGGAAGTGGAAGACTTCCTTTCAGCCTTTGAGCCACTCCACAAGGCTCAGAGGGAAGCTGAAGCGCTGCAAGGGAGGGTAGAAGAAGAGGCCTAACCGAGGCTAAGAGAAGAAAATTTAGAAAAATAAAAAGAAAGAAAAGTAGAGGAAGAAGGACAGAAAGCGACCGCATCTGGGTTGCATTCTGAAGAAGGCCTAGCCGAGGCCACCATTGATCAGCCAGCTGAAGAGGTTTTTCAGCCTCTATTCACGAATGACCCACCAGCAGCTGATAGTACCTCTTCGGGAGAGAAGAGGGATGAAGAGGAAAAAGAAGACGAGGAGGCCGAGACCTCCACTGACTCTGATACAGAATCCGATTCGGAGATAAGGGAACTAGATGGCGACCAAGTCCCTATCTCTGCAGCATTGAGAAGAAAGAGGAAGAGAGAGATTAAAGCTGAGAGGAGGACAAAGAACAAGAATGACCCGATATTTGCCAAGAGGCCGAGGACAAATCACCCAAGGCTGCATCTCCCAAAAATCTATTCCCTGAGGTATTTAGAGATGTTAATTTTCAGGAACGAATGGAAATCATGAGAAAGAGAGATTTCCTCAATGAGAAGGGATTCTCTAATAGAGTAGGAGCACTGCCAAAGTTCGTGAGTAGGATCATTTCGCAGTACAAATGGCAGGACTTCTGTGCTCACCCTCAGGAGGCTGTCGTGCCTCTAGTTCGTGAATTTTATGCCGGTCTGAGGGAGGAGAGCATTAGCATGGCGGTTGTGAGGGGGAAGATGGTCAGTTTCTCCTCAGTCGACATTAATAGGGTGTACAGAATCAAGGCACCCTTGAATCCAAGAGGGAATGATGTGATAAGGAACCCTTCGGCCAAGCAGATGAAAGAAGCTCTTAAACTTGTGGCCAATAAGGGGGTGCAGTGGAAAGAACCACACACGAAAGTGAAGTCTTTAGTGCCAAATGACCTAAAGCCAGAATCGGCAGTTTGACTTCACTTCATCAAGAACCGTTTGATGCCAACCACCCACGATAGCACGATCTCAGTCGATAGAGTTATGTTACTCTATTGCATTATGAAGGGGTTGGAGATCAACGTAGGGAGCATAATACGGGATGAGATTTTAGCCTGTGGGAGAAAAAGAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTCTACCAAAGGGTGAAGATTGTTCCGGGCAAGGACGAGGAGCGTCACTTCTTCAAGCCGACCATCGACCTGTCCTTGATCTAGAAGCTCTAGCAGAACAGCATCCAGAGGAAAGACAAAGCCTCGACATCTCAGGCTACTCCTCAATCAGGGTCGAATGTAGCTTCTCCATCCCAACACACTCCTTTTTCAGGGCCTTCACCATCATCGGAAGAACTAGCTATTGCCTACTGCCAGTTAGATCAAATCAGGGAGAACCTGAAGACGTATTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGCCCCGAGTATTGCTCCGATCTTTCCAAATTTCCCTCAGTCGCTGCTGCCTGAAGAAGAGAAGGATTCTGACGAAGAGGAAGATGAAGAGAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGAACGAGGACTAG

mRNA sequence

ATGCCTCCGAACGTATTCGAAGGAATAATTCGCCAACCAGTGGCAAAGGCTCTTGCGATTGCTGAAGGGTACAAGGCTGAACAGGATGCTTTGAAAGAGGTTGAGACTGAGAGAGAGATGGAAAATCAGAAAATGGTTGAGGAAGACGAGTTTGCAAAGGAAAGAGATCGTGAAGAAGAGAAAAGAAGGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAAGAAGAAAGAAAATATGAGGAAAACCTCAGGAGGGCAGCCATTGATTTGCAGCTCCTTGAGGAAGAGAAAAAGAAAAGGGAAGAAATAAAAGAAGATGAGAAAAGAAGGAAGGAAGTGGAAGACTTCCTTTCAGCCTTTGAGCCACTCCACAAGGCTCAGAGGGAAGCTGAAGCGCTGCAAGGGAGGAAAGCGACCGCATCTGGGTTGCATTCTGAAGAAGGCCTAGCCGAGGCCACCATTGATCAGCCAGCTGAAGAGGTTTTTCAGCCTCTATTCACGAATGACCCACCAGCAGCTGATAGTACCTCTTCGGGAGAGAAGAGGGATGAAGAGGAAAAAGAAGACGAGGAGGCCGAGACCTCCACTGACTCTGATACAGAATCCGATTCGGAGATAAGGGAACTAGATGGCGACCAAGTCCCTATCTCTGCAGCATTGAGAAGAAAGAGGAAGAGAGAGATTAAAGCTGAGAGGAGGACAAAGAACAAGAATGACCCGATATTTGCCAAGAGGCCGAGGACAAATCACCCAAGGCTGCATCTCCCAAAAATCTATTCCCTGAGAGTAGGAGCACTGCCAAAGTTCGTGAGTAGGATCATTTCGCAGTACAAATGGCAGGACTTCTGTGCTCACCCTCAGGAGGCTGTCGTGCCTCTAGTTCGTGAATTTTATGCCGGTCTGAGGGAGGAGAGCATTAGCATGGCGGTTGTGAGGGGGAAGATGGTCAGTTTCTCCTCAGTCGACATTAATAGGGTGTACAGAATCAAGGCACCCTTGAATCCAAGAGGGAATGATGTGATAAGGAACCCTTCGGCCAAGCAGATGAAAGAAGCTCTTAAACTTGTGGCCAATAAGGGGGTGCAGTGGAAAGAACCACACACGAAAGTGAAGTCTTTAGTGCCAAATGACCTAAAGCCAGAATCGGCAAACAGCATCCAGAGGAAAGACAAAGCCTCGACATCTCAGGCTACTCCTCAATCAGGGTCGAATGTAGCTTCTCCATCCCAACACACTCCTTTTTCAGGGCCTTCACCATCATCGGAAGAACTAGCTATTGCCTACTGCCAGTTAGATCAAATCAGGGAGAACCTGAAGACGTATTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGCCCCGAGTATTGCTCCGATCTTTCCAAATTTCCCTCAGTCGCTGCTGCCTGAAGAAGAGAAGGATTCTGACGAAGAGGAAGATGAAGAGAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGAACGAGGACTAG

Coding sequence (CDS)

ATGCCTCCGAACGTATTCGAAGGAATAATTCGCCAACCAGTGGCAAAGGCTCTTGCGATTGCTGAAGGGTACAAGGCTGAACAGGATGCTTTGAAAGAGGTTGAGACTGAGAGAGAGATGGAAAATCAGAAAATGGTTGAGGAAGACGAGTTTGCAAAGGAAAGAGATCGTGAAGAAGAGAAAAGAAGGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAAGAAGAAAGAAAATATGAGGAAAACCTCAGGAGGGCAGCCATTGATTTGCAGCTCCTTGAGGAAGAGAAAAAGAAAAGGGAAGAAATAAAAGAAGATGAGAAAAGAAGGAAGGAAGTGGAAGACTTCCTTTCAGCCTTTGAGCCACTCCACAAGGCTCAGAGGGAAGCTGAAGCGCTGCAAGGGAGGAAAGCGACCGCATCTGGGTTGCATTCTGAAGAAGGCCTAGCCGAGGCCACCATTGATCAGCCAGCTGAAGAGGTTTTTCAGCCTCTATTCACGAATGACCCACCAGCAGCTGATAGTACCTCTTCGGGAGAGAAGAGGGATGAAGAGGAAAAAGAAGACGAGGAGGCCGAGACCTCCACTGACTCTGATACAGAATCCGATTCGGAGATAAGGGAACTAGATGGCGACCAAGTCCCTATCTCTGCAGCATTGAGAAGAAAGAGGAAGAGAGAGATTAAAGCTGAGAGGAGGACAAAGAACAAGAATGACCCGATATTTGCCAAGAGGCCGAGGACAAATCACCCAAGGCTGCATCTCCCAAAAATCTATTCCCTGAGAGTAGGAGCACTGCCAAAGTTCGTGAGTAGGATCATTTCGCAGTACAAATGGCAGGACTTCTGTGCTCACCCTCAGGAGGCTGTCGTGCCTCTAGTTCGTGAATTTTATGCCGGTCTGAGGGAGGAGAGCATTAGCATGGCGGTTGTGAGGGGGAAGATGGTCAGTTTCTCCTCAGTCGACATTAATAGGGTGTACAGAATCAAGGCACCCTTGAATCCAAGAGGGAATGATGTGATAAGGAACCCTTCGGCCAAGCAGATGAAAGAAGCTCTTAAACTTGTGGCCAATAAGGGGGTGCAGTGGAAAGAACCACACACGAAAGTGAAGTCTTTAGTGCCAAATGACCTAAAGCCAGAATCGGCAAACAGCATCCAGAGGAAAGACAAAGCCTCGACATCTCAGGCTACTCCTCAATCAGGGTCGAATGTAGCTTCTCCATCCCAACACACTCCTTTTTCAGGGCCTTCACCATCATCGGAAGAACTAGCTATTGCCTACTGCCAGTTAGATCAAATCAGGGAGAACCTGAAGACGTATTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGCCCCGAGTATTGCTCCGATCTTTCCAAATTTCCCTCAGTCGCTGCTGCCTGAAGAAGAGAAGGATTCTGACGAAGAGGAAGATGAAGAGAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGAACGAGGACTAG

Protein sequence

MPPNVFEGIIRQPVAKALAIAEGYKAEQDALKEVETEREMENQKMVEEDEFAKERDREEEKRRREEEQEAERALEAEEERKYEENLRRAAIDLQLLEEEKKKREEIKEDEKRRKEVEDFLSAFEPLHKAQREAEALQGRKATASGLHSEEGLAEATIDQPAEEVFQPLFTNDPPAADSTSSGEKRDEEEKEDEEAETSTDSDTESDSEIRELDGDQVPISAALRRKRKREIKAERRTKNKNDPIFAKRPRTNHPRLHLPKIYSLRVGALPKFVSRIISQYKWQDFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMKEALKLVANKGVQWKEPHTKVKSLVPNDLKPESANSIQRKDKASTSQATPQSGSNVASPSQHTPFSGPSPSSEELAIAYCQLDQIRENLKTYWAYAKERDEAIREFYLSIAPSIAPIFPNFPQSLLPEEEKDSDEEEDEENDDEDDEEKESSSNED

Homology

The following BLAST results are available for this feature:

BLAST of Spg028649 vs.


Match Name	E-value	Identity	Description

BLAST of Spg028649 vs.


Match Name	E-value	Identity	Description

BLAST of Spg028649 vs.


Match Name	E-value	Identity	Description

BLAST of Spg028649 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 24..44
None	No IPR available	COILS	Coil	Coil	coord: 48..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 372..424
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 468..508
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..508
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 381..422

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028649.1	Spg028649.1	mRNA