Spg028642 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028642
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	SWIM-type domain-containing protein
Location	scaffold7: 16509954 .. 16515336 (-)
RNA-Seq Expression	Spg028642
Synteny	Spg028642

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATCTAGTGCTATTGTTGGATATGAGAAATTGTTGTCCGTTGATTCTTCCTCATCTTGTTCTACTAGTAATGTTGATTTTCAAGTTATTACTGATGTGCATTTTGATGGGGATTTAAAGGAGAATGATCTTTTTGGAAGTAAGGAAGTTTTTGTCGAAGTGTTTTTATTTTATGTCTGTGAAGAAAATTTTTGAATTTAAGACTTTTAAGATCAAATTCAAAATCACTTGAGTTTCAATGTGTTCAGGATGGTTGTCAATGGTATGTTAGTGACGGAAGAGATTGTCGCGGTCTCTTGTCAAATAAATTTGTAATCCACGATTCCTAAAGCTAACTTGTAGCAGTAGTGGTCGGGGTCGATCATATGGAACAGTTGGTTTATTTCTAAATTTTTTTTTGTGTTTTTGAGGTAACCAAAAGGGGGTTTATGGATAAAAGATTAAGACATAAAGTAAAGTCGGGAAAATAAATAAGGAAAATTAAATGCAAGGAAAGTAAAGGCGGGGTTAGTTGATCTTACCATGAAGATTATGTAATCGGTTCTCGGGATGTAAGTTTGGTGATTCAATCATTGACTCTCTTAATTAATTGAATTATTTAACAAATTGTCTAACCGTCACTGAAACCAGTGATTAAAGACCCCTAGTGTTTCCAACCCGACCAATGCATCGAAGTTGAAGCCTAATTAGATTGCTAACCAATGTCGTCTCATTAATAAGAATCTAATTGCATTAAGTAAAAGTGGATCGTTAGATAGACTCGTATAAACTAGGAAAAGCCTAAATTCATACAATTCTAAGTCTAAATTTCTAGATTTATCATGCAATTGAGCTAATTGGGATAACACGCCTTTCAACACAATTAACACAATAAACTATTACTAACCAATTTAGCATAACAATTAAACCAAGTCAAGCAAATAGGTTGTCAATCTATTCTATCAATTTAATTGTAATTAAAACGGAAATTTAGAACACAACCGACAATAATTCAATAAACTAAATATGAGGTCTCAAGAATACCAAAACTCACATTAACGAGTCTCGATTACAGCAATCCGAGCTTAGTTGGCCATAGACAAGCACCTCCAAGCTCGAGGCTCGATCAATTGACCCATGGACTAAGAAAACTTAAAAGAACTCTTGAAAACTAAGAGAAGGGTGGCTACAATTTAGAGAAATTGAACTAATACAAGGGATGATTCTAAACCTACACCAAAGGCCTCTATTTATAGTGGTTCTTGGCCTTCAATTCGTGGTAAATTGGTGCTGAATGGGGCCTCCAAATATGGGAAAATCGCCAGCCAAAATAGGAAAATATCAAATCTGGAAAACTGCCTAGCGTCGTGACACTGTGGATAGCGTCGCGACGCTGTCCCCTCAATTTTGGAAATTTGTTCTCGGATTGCTCTAGCGTAGCGATGTTGTGGGCTAGCGTTGCGACTCTGTTCGCCAGCTTGATCTCCAAGTAGTTTCCTTATTTGGCTAGCGTCTCGACTCTGATGATGGGCGTCTCGACGCTGATGAGGCTCCAGAGGCAAAATGGTCATTTTACGCTCCGGTTTCGCTCGTTTAAGCCCCGAATTGCTTCCAAAGCTCTGGTGAGGACCTATAGACATATTATACTCATTTTAAAGCATTTTTCGCAAGGAATTCAACTAAGATAAGAAAATTGGGAGATTCTAAGTATATAACAAATTAGACCGATCAGTTAGGGCATCTCGTTACAAGGAGAGTGAATTGTGGATGCTTAGGAAGTATGTATCTAATCACGATTGTTCTATGAATAGTATCCAAACTTGTCATAGGCAAGCTTCTTCATCCTCTTATTAGTGATTGTTTGAAAGAGGAATTTAGATTTAGTTCTTTAGACCAATCAACTTCGAAAGATATTGTGCATAAGATGCGTACAAAACTTGGAGTCAATGTTAGTTATTACAAAGCTTGGAGAGCAAAAGAACATATTATAAAGTCGTTAGAAAGATGATGCAACTGAATCGTATAGCTTGATTCCAAAGTTTTTTGCAAAGTTAGAAGAGATGAATCCAGGTTTGTTTTCTATCAATTTTTGCAGTTATTACTCATAGATTCTATCAATGATATAAACTATTCTATCACTGTCTTATAGATGTCAGTTTTTCAGGTACATACACATTATTTGAAACTGATGCAGATGGACATTTTAAGTACTGTTTTATGGTTGTTGGTTCATCTATTGAGGGTTGGAAGTATTGTAGGCCTAATATATATGTGGATGGCACATTCTTGGAGGGTAAATTTGTTGGAACTCTATTGACAGCCTCAACTCTTGATGGTAACAATCAATTTTTTCCTTTTGCTTTCGACATTGTAGATTCTGAAAATGATGCATCATGGAAATGGTTTTTTGAGAATATAAAGAATAGTTTTGGAGATCGAGAAGGTTTAGTTATTGTCTCTGATAGACATTTGAGTATTCCCAAGGGTGCTTTGGCTATTTTTCCAACTGTTGAGTATTATACTTGCATTCAACATCTATTGAGAAATATGGAGTCATCATATAAAGATTCTTTGTTAGATAAGATTTTTTTTTTCAGCTGTGCAAAAGCTTATACAGTGGATGATTTTGAGTTAAACATGAGGTAGATGGAGTTGATACATCCTACTATTCGAGAATATCTCAATAATGTCGGATTTGAAAAGTGGGCTCGTGCATATTCTAGGAGAAGGAGATATCGAATGATGACAACAAATGTTTCAGAATGTTTAAACTCAATTTTATTAGAGTCTAGAGATTTTCCTGTTGCAACACTACTTGATGCTATCAGAAGTTTATTGCAAAGGTGGTTTTATGAGCGAGGTAATGTAGCATCTCGTATGAAGTCTACTTTGACCATTTGGGCAGAGAGTGAGTTACAAAAAGAACATCATAAATCAAGAAGTTTTGTGGTAAGACTTCTATGTTTATGACTTTCTATCATAAAAGTCTATCACTGATAGAATTTTATGTTTCTTCTATCGTTTATATCAGTGATAGAATCTATCACTGATAGATTTCTATCAGTGGTAGAATCTAGCACTAATACAAATATATCAGTGATAGAAATTATATCAAACCTACTGTGATACTTTTATATTTTTCAAATAACTTTTTTTATGTTTTTTTCCAGGTTGATCCTATTAGTAACGAACAATTCAAAGTAATTGACGGAGATAACTATTTCATTGTGAAGTTGGATTCGAAATCATATAGTTGTCGTGTTTGGGATATTGATGAAATCCCATGTGCTCATGCACTTGTTGTTCTTCGTGGGCAGAATTTGAATACTTATTCTTTTGTCTTAGATTATTACTTTTCAAGAACATTGTCATCAACTTATAGAGGTTTTGTTCATCCCGCCGGTAATCATTCTGAATGGAGCTCTATAGATGGGAACGTGAATGCGTTGCCTCCAGTTGTTAAACGTCAAGCAGGAAGACCTAGAAAACAGAGGATGCTATCAATTGGTGAAGTAAAAAATCGTACAAAATGTAGTCGTTGTCATCGTGTTGGTCACAATTGTAGGACATGTAAATTTTCACCATTCATACAATGATGTAATTGACTTACTCTTGTTATACATTTGATTTGAATAACATCAATGTTAATTCTTTCATTTTCTATTTCAAAAAAAAAAAAAAAAAAACTTTCATTTTCTATTTTCTTTGCTTGTTTTTCTACTATTTTCCCTTTTTTTTTTTTCTATCTTGTTTGCTTTGAGAATCTTTTTACTAAAATGTATTGATAGATAGTGTTATTAGAAACCTAAGTGATAGATCTACAATTTTAATCACTTTAATTTAATTGATTATTATTAAAAGATAATTAGAATACAAGATAAATGAGTGAGTCGAATCTATAGTAATAAAAAAAATATAGAATCTGATAGAATGCATTAAAAAAAAAAAAACAACATTTACTTTTTCCAGTGTAATAATATAAGCAACTATATACCACATGACTGATAGAATCTATCAGTGTTAGCATTTCTCCCCAACATGACTGATAGATTCTATCAGTGATAGAATCAAAACCAACTTTTTTTTTCTTACCATTTTTCCTCTACATTCTGAAATGAATCTCAAAATCAATACACAATAACTCAGACAAAAACTTACAATTAGCAACTCAGAATATAATTACAACAACTCAGGAATTAGAATCAATAAAGTTTGTCCCCAACATGACTGATAGAATCTATCACTGTAACTGATAGAATCTATCAGTGATAGAATCAAAACCGACTTTTATTTTTCCTATATACCAATTTTCCTCTACATCTTGAAGTGAATCTCAAAATCAATACACAACAACTCAGACAACAATTTTGAATTTTTAACTCATAATAGAATTACAACAACTATAAATTTGTCCCCAACATGACTGATAGAATCTATCACTGTAACTGATAGAATCTATCAGTGATAGAATCAAAACCAACTTTTTTTTCTTGTATACATCAATACCCAACAACTTAGAATCAATAACTCAGAAACTTAGAATTAGCGACTTAGAATTAATAAAGTTTTTCAATTTCATTAAATGAAAATCCAAGTCACAGAGAAGTACAAGAGAAATCTTACAACATTACAAAAAACAATTGTATCCTTTACAAGATAAGAAATATCCAAACATGTCATTTTTCTTTAGAAATCTTCAAATCAAAGCTAGGAGCATCTATCTTCAATGAGTTTGCATAAGACCGGACCGCAAAATAGTAACCACTAAATGTAACGTCGTTGACTAGTTTAGATTTCTATTTCAATAGGATGACCTAGGTAACTCAATCTTAATCCTGAGTCTGTTATGAACTCCTTTTTAGGAGGGATTGTCCTTAGATTTGTATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAATCCTACCATTTCAGGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTTCTTCCCTTATTGGGGCAAGTAGATGTGTGTTCCCTTAAGGGCTGATTTCGGGGCTTGAACAAAAGCGCGTTGTCCTCTCCTGGCCCGAGAGGAATTTCTGTTTAGTGGTTGGACCCTAAACAAGTTGTTCATTAGAAGGATCAGTGGTACTTTAGGAACCAGAGGTAACCCAGGGGTAAAACGGTAATTTGACCCAGCTGGTGTTACGAACACACGTGAAGGATTGACTTACTGCATTGGTCGATATCCATGGACACAGAAATATTCTACAGTGAGAAGAGTGCAACTGTGGGTCTTTAGTGGAGTGACCCACAGTTAACGAATGTTGATTAACTTGGTTAATGAGTTTAGCCAGTTAATCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCACCTGCTAGCTCATAA

mRNA sequence

ATATCTAGTGCTATTGTTGGATATGAGAAATTGTTGTCCGTTGATTCTTCCTCATCTTGTTCTACTAGTAATGTTGATTTTCAAGTTATTACTGATGTGCATTTTGATGGGGATTTAAAGGAGAATGATCTTTTTGGAAGATGGTTGTCAATGTTTCCTTATTTGGCTAGCGTCTCGACTCTGATGATGGGCGTCTCGACGCTGATGAGGCTCCAGAGGCAAAATGGTCATTTTACGCTCCGGTTTCGCTCGTTTAAGCCCCGAATTGCTTCCAAAGCTCTGGTTGATCCTATTAGTAACGAACAATTCAAAGTAATTGACGGAGATAACTATTTCATTGTGAAGTTGGATTCGAAATCATATAGTTGTCGTGTTTGGGATATTGATGAAATCCCATGTGCTCATGCACTTGTTGTTCTTCGTGGGCAGAATTTGAATACTTATTCTTTTGTCTTAGATTATTACTTTTCAAGAACATTGTCATCAACTTATAGAGGTTTTGTTCATCCCGCCGGTAATCATTCTGAATGGAGCTCTATAGATGGGAACGTGAATGCGTTGCCTCCAGTTGTTAAACGTCAAGCAGGAAGACCTAGAAAACAGAGGATGCTATCAATTGGTCCATTAGGTCCACCTGCTAGCTCATAA

Coding sequence (CDS)

ATATCTAGTGCTATTGTTGGATATGAGAAATTGTTGTCCGTTGATTCTTCCTCATCTTGTTCTACTAGTAATGTTGATTTTCAAGTTATTACTGATGTGCATTTTGATGGGGATTTAAAGGAGAATGATCTTTTTGGAAGATGGTTGTCAATGTTTCCTTATTTGGCTAGCGTCTCGACTCTGATGATGGGCGTCTCGACGCTGATGAGGCTCCAGAGGCAAAATGGTCATTTTACGCTCCGGTTTCGCTCGTTTAAGCCCCGAATTGCTTCCAAAGCTCTGGTTGATCCTATTAGTAACGAACAATTCAAAGTAATTGACGGAGATAACTATTTCATTGTGAAGTTGGATTCGAAATCATATAGTTGTCGTGTTTGGGATATTGATGAAATCCCATGTGCTCATGCACTTGTTGTTCTTCGTGGGCAGAATTTGAATACTTATTCTTTTGTCTTAGATTATTACTTTTCAAGAACATTGTCATCAACTTATAGAGGTTTTGTTCATCCCGCCGGTAATCATTCTGAATGGAGCTCTATAGATGGGAACGTGAATGCGTTGCCTCCAGTTGTTAAACGTCAAGCAGGAAGACCTAGAAAACAGAGGATGCTATCAATTGGTCCATTAGGTCCACCTGCTAGCTCATAA

Protein sequence

ISSAIVGYEKLLSVDSSSSCSTSNVDFQVITDVHFDGDLKENDLFGRWLSMFPYLASVSTLMMGVSTLMRLQRQNGHFTLRFRSFKPRIASKALVDPISNEQFKVIDGDNYFIVKLDSKSYSCRVWDIDEIPCAHALVVLRGQNLNTYSFVLDYYFSRTLSSTYRGFVHPAGNHSEWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGPLGPPASS

Homology

[Close]

BLAST of Spg028642 vs. NCBI nr
Match: XP_038880504.1 (uncharacterized protein LOC120072166 [Benincasa hispida])

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-38
Identity = 82/125 (65.60%), Postives = 96/125 (76.80%), Query Frame = 0


Query: 83  RSFKPRIASKALVDPISNEQFKVIDGDNYFIVKLDSKSYSCRVWDIDEIPCAHALVVLRG 142
           RSFK        VDPI+NE++KVIDGDN+F+V L  KS SCRVWD+ EIPCAHA  V+ G
Sbjct: 130 RSFK--------VDPINNEEYKVIDGDNHFLVNLAYKSCSCRVWDLVEIPCAHACAVICG 189

Query: 143 QNLNTYSFVLDYYFSRTLSSTYRGFVHPAGNHSEWSSIDGNVNALPPVVKRQAGRPRKQR 202
            NL+ Y+FVLDYYF  TL STY+G V+P GNHS+W SID  VN LPP+VKR  GRPRKQR
Sbjct: 190 LNLDIYTFVLDYYFCSTLLSTYKGSVYPIGNHSDWRSIDVGVNVLPPIVKRPVGRPRKQR 246

Query: 203 MLSIG 208
           +LSIG
Sbjct: 250 ILSIG 246

[Close]

BLAST of Spg028642 vs. NCBI nr
Match: XP_038907134.1 (uncharacterized protein LOC120092945 [Benincasa hispida])

HSP 1 Score: 162.9 bits (411), Expect = 3.0e-36
Identity = 71/113 (62.83%), Postives = 92/113 (81.42%), Query Frame = 0


Query: 95  VDPISNEQFKVIDGDNYFIVKLDSKSYSCRVWDIDEIPCAHALVVLRGQNLNTYSFVLDY 154
           VD I+NE++KV+DGDN+++V + SKS SC  WD++EIPCAHA  VL   NL++Y+FV DY
Sbjct: 568 VDSINNEEYKVVDGDNHYVVNVISKSCSCCFWDLEEIPCAHACAVLSELNLDSYAFVSDY 627

Query: 155 YFSRTLSSTYRGFVHPAGNHSEWSSIDGNVNALPPVVKRQAGRPRKQRMLSIG 208
           YFS T SSTY+  +HP GNHS+WSS+D + N LPP+VKRQ GRPRKQR+LS+G
Sbjct: 628 YFSNTFSSTYKRSIHPIGNHSDWSSVDVDGNVLPPIVKRQVGRPRKQRILSMG 680

[Close]

BLAST of Spg028642 vs. NCBI nr
Match: XP_038887651.1 (uncharacterized protein LOC120077739 [Benincasa hispida])

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-31
Identity = 70/118 (59.32%), Postives = 87/118 (73.73%), Query Frame = 0


Query: 83  RSFKPRIASKALVDPISNEQFKVIDGDNYFIVKLDSKSYSCRVWDIDEIPCAHALVVLRG 142
           RSFK        VDPI+N+++KV+ GDN+ +V L SK  SCRVW++ EIPCAHA  ++RG
Sbjct: 21  RSFK--------VDPINNKEYKVVHGDNHLLVNLASKLCSCRVWNLVEIPCAHACAIIRG 80

Query: 143 QNLNTYSFVLDYYFSRTLSSTYRGFVHPAGNHSEWSSIDGNVNALPPVVKRQAGRPRK 201
            NL+ Y+FVLDYYF  TL STY+G V+P GNHSE  S+D  VN LPP+VKR AGRP K
Sbjct: 81  LNLDIYAFVLDYYFFSTLLSTYKGSVYPIGNHSELRSVDVGVNVLPPIVKRLAGRPHK 130

[Close]

BLAST of Spg028642 vs. NCBI nr
Match: TYK03234.1 (uncharacterized protein E5676_scaffold298G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 6.5e-31
Identity = 63/114 (55.26%), Postives = 86/114 (75.44%), Query Frame = 0


Query: 94  LVDPISNEQFKVIDGDNYFIVKLDSKSYSCRVWDIDEIPCAHALVVLRGQNLNTYSFVLD 153
           +V+P+S  +F+V+DG   F+VKL+  S SC  WD++EIPCAHAL+V+R  NLN Y+FV  
Sbjct: 69  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQ 128

Query: 154 YYFSRTLSSTYRGFVHPAGNHSEWSSIDGNVNALPPVVKRQAGRPRKQRMLSIG 208
           YY++  LS+TY G V P GNH++WS ++ N N LPPV +R AGRPRK+R+ SIG
Sbjct: 129 YYYATVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIG 182

[Close]

BLAST of Spg028642 vs. NCBI nr
Match: TYJ96591.1 (uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-30
Identity = 63/114 (55.26%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 94  LVDPISNEQFKVIDGDNYFIVKLDSKSYSCRVWDIDEIPCAHALVVLRGQNLNTYSFVLD 153
           +V+P+S  +F+V+DG   F+VKL+  S SC  WD++EIPCAHAL+V+R  NLN Y+FV  
Sbjct: 468 IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQ 527

Query: 154 YYFSRTLSSTYRGFVHPAGNHSEWSSIDGNVNALPPVVKRQAGRPRKQRMLSIG 208
           YY++  LS+TY G V P GNH++WS +  N N LPPV +R AGRPRK+R+ SIG
Sbjct: 528 YYYATVLSATYGGLVRPIGNHTDWSVVGVNDNILPPVFRRPAGRPRKRRIPSIG 581

[Close]

BLAST of Spg028642 vs. ExPASy TrEMBL
Match: A0A5D3BVP4 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00470 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 3.1e-31
Identity = 63/114 (55.26%), Postives = 86/114 (75.44%), Query Frame = 0


Query: 94  LVDPISNEQFKVIDGDNYFIVKLDSKSYSCRVWDIDEIPCAHALVVLRGQNLNTYSFVLD 153
           +V+P+S  +F+V+DG   F+VKL+  S SC  WD++EIPCAHAL+V+R  NLN Y+FV  
Sbjct: 69  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQ 128

Query: 154 YYFSRTLSSTYRGFVHPAGNHSEWSSIDGNVNALPPVVKRQAGRPRKQRMLSIG 208
           YY++  LS+TY G V P GNH++WS ++ N N LPPV +R AGRPRK+R+ SIG
Sbjct: 129 YYYATVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIG 182

[Close]

BLAST of Spg028642 vs. ExPASy TrEMBL
Match: A0A5D3BD68 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1278G00090 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.0e-31
Identity = 63/114 (55.26%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 94  LVDPISNEQFKVIDGDNYFIVKLDSKSYSCRVWDIDEIPCAHALVVLRGQNLNTYSFVLD 153
           +V+P+S  +F+V+DG   F+VKL+  S SC  WD++EIPCAHAL+V+R  NLN Y+FV  
Sbjct: 468 IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQ 527

Query: 154 YYFSRTLSSTYRGFVHPAGNHSEWSSIDGNVNALPPVVKRQAGRPRKQRMLSIG 208
           YY++  LS+TY G V P GNH++WS +  N N LPPV +R AGRPRK+R+ SIG
Sbjct: 528 YYYATVLSATYGGLVRPIGNHTDWSVVGVNDNILPPVFRRPAGRPRKRRIPSIG 581

[Close]

BLAST of Spg028642 vs. ExPASy TrEMBL
Match: A0A1S3CSI6 (uncharacterized protein LOC103504407 OS=Cucumis melo OX=3656 GN=LOC103504407 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 9.2e-31
Identity = 67/113 (59.29%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 95  VDPISNEQFKVIDGDNYFIVKLDSKSYSCRVWDIDEIPCAHALVVLRGQNLNTYSFVLDY 154
           V+ I++ +F+VI+G   FIV+LD KS +CRVWD+D+IPCAHAL VLRG+++NTYSFV  Y
Sbjct: 1   VNAINDVEFQVIEGRKQFIVRLDCKSCTCRVWDLDKIPCAHALAVLRGRSMNTYSFVSKY 60

Query: 155 YFSRTLSSTYRGFVHPAGNHSEWSSIDGNVNALPPVVKRQAGRPRKQRMLSIG 208
           + S TL STY G V P GNH+ W SI    N LPP  KR+AG+ +KQR+LSIG
Sbjct: 61  FLSSTLISTYTGSVRPVGNHANWKSIGIENNILPPTFKRRAGQLQKQRILSIG 113

[Close]

BLAST of Spg028642 vs. ExPASy TrEMBL
Match: A0A5A7TVL2 (ZnF_PMZ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00860 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 4.5e-30
Identity = 62/114 (54.39%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 94  LVDPISNEQFKVIDGDNYFIVKLDSKSYSCRVWDIDEIPCAHALVVLRGQNLNTYSFVLD 153
           +V+P+S  +F+V+DG   F+VKL+  S SC  WD++EIPCA AL+V+R  NLN Y+FV  
Sbjct: 136 IVNPMSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPCARALIVIRSLNLNPYAFVSQ 195

Query: 154 YYFSRTLSSTYRGFVHPAGNHSEWSSIDGNVNALPPVVKRQAGRPRKQRMLSIG 208
           YY++  LS+TY G V P GNH++WS ++ N N LPPV +R AGRPRK+R+ SIG
Sbjct: 196 YYYATVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIG 249

[Close]

BLAST of Spg028642 vs. ExPASy TrEMBL
Match: A0A5D3C7L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00780 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 4.5e-30
Identity = 63/112 (56.25%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 95  VDPISNEQFKVIDGDNYFIVKLDSKSYSCRVWDIDEIPCAHALVVLRGQNLNTYSFVLDY 154
           VDPIS  +++V +G+  FIVKL+ +  SCRVWD++EIPCAHALVVLR  NL+TYS+V ++
Sbjct: 190 VDPISTTEYQVTNGNQQFIVKLNVECCSCRVWDVEEIPCAHALVVLRMLNLDTYSYVSEF 249

Query: 155 YFSRTLSSTYRGFVHPAGNHSEWSSIDGNVNALPPVVKRQAGRPRKQRMLSI 207
           Y+  TLS TY G + P G+H +W  +D  +  LPPV KRQAGRP KQR+ S+
Sbjct: 250 YYRETLSETYNGCIQPVGSHFDWRVVDSVMKILPPVFKRQAGRPGKQRIPSV 301

The following BLAST results are available for this feature:

BLAST of Spg028642 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880504.1	1.9e-38	65.60	uncharacterized protein LOC120072166 [Benincasa hispida]	[more]
XP_038907134.1	3.0e-36	62.83	uncharacterized protein LOC120092945 [Benincasa hispida]	[more]
XP_038887651.1	1.3e-31	59.32	uncharacterized protein LOC120077739 [Benincasa hispida]	[more]
TYK03234.1	6.5e-31	55.26	uncharacterized protein E5676_scaffold298G00470 [Cucumis melo var. makuwa]	[more]
TYJ96591.1	1.4e-30	55.26	uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]	[more]

BLAST of Spg028642 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg028642 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BVP4	3.1e-31	55.26	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5D3BD68	7.0e-31	55.26	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CSI6	9.2e-31	59.29	uncharacterized protein LOC103504407 OS=Cucumis melo OX=3656 GN=LOC103504407 PE=...	[more]
A0A5A7TVL2	4.5e-30	54.39	ZnF_PMZ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3C7L7	4.5e-30	56.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Spg028642 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 119..146 e-value: 1.3E-4 score: 31.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..215
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 112..144 score: 8.147248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028642.1	Spg028642.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding