Spg028609 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028609
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold7: 13529526 .. 13537552 (+)
RNA-Seq Expression	Spg028609
Synteny	Spg028609

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAATCTGGGGTGCTGTTCCCATGGCGTGCAGGTAAACAGAATGCTTAAGCCAGACAAGTGGCAGGCAGCATTTGATAGTGATGGAAAGGCTTTGGGCTTTCAGAAGGCACTGAAATCAATAATTTTGGGGGTATGTTGTCTTACCATGAAAGATGGAGAGATTCTATCTTAAAAGTCATTTCTTAGGTTTTTTCGTCTTCTTTAAACATATTTTATGGCCAGGAGAAAGCTCTCGTAGGTTCTATAATTATCTTGAATTTCTCTTGCTCTTTACAACCAGCATTGGTTTTTTCTTGGTTTCATGATTAGCAATTTGGATTGCTTGTAAATGTTTAAATTTGATGAGAAGGAGAATGGCAAATTGGCATTAATTACAAACCAAGTGAAAAAAATACAACAGGAGTGGAAAATAGGCGGCATGTTTCTCCATTGGCTAATTTTTTCAGATAAGAGACAATTTCATTGACATAAATGAAATTAAAAAGGGCACTAAATTATTAAAAAACTATCCAGTTAGGATTATAAAAGTTAAAAGTAGATTTACAATATGGATTTAAATTGTGGGAAGATTTTTGGTCTAATGCTCATTTCATTTCCTCCTTTTGGATCTTAAGGTATAATGCATGCATAATTTTCAAATAAGTTCCTATGGATCCCTTATAGCATAGACTTGGATGATCTCAAAACACTATGAGAAATCACCTGAAATTCAACAATTGTGGTTACCTTGGAGGTTTTATTTAGCTTAAAGTTTAATTTGTAAGGAAATTGTGTATAGTTTAGCTTAAGTTTAGTTCTTGTTTGTTAGTTCTTGGGGTTTTGGGTTCAATTTGAAAGAAAAGAGGGAGCTCTCTTCTTTCTATATTTGATAGTAGGTAGTGAAATCAGTTACAATGGCTTGCAATGTCTAGTGTTCAGTTTTTCAAGTTCCTTCAAAATGCAAAATTCTTTTTAAATAACTTTTTTAAGGAGAGGTTTGAAAAGGGTGAGAGAAGTATGGAAAAACTAGTTAACCGTCCATGGTTGTTTGTTTCTAGGAAATTTAGAGATGCTCGTCATCCAAATGTCTAGGAATTGGACGCTCGACACCCTTAGATTTTTTGCGTTTGTTTGGCAAAATAAAATTTTATGGGGATGCCTGAGAATATTTTAATAACTATATTTGTTTTGCAAAATTTGTGAATTCGAATGCGTTATAATTATATGTGAATACACTAAATTTAATTAATTTTATTGTTAAATTATTTCTTATTACTTTAGTATTTATTATGGATTAGTTATTTAATTATATCAAGTTTAGTGTAAAGTTGATAATTTATTCGTTTAGTTTAAATTTAATCGATATATCGACCTAACTTCATCACTTCTTTATTTTTTTTTATTAAATAATAATTTTAGTATAATTATACTTTGAAATTTGGGTTAACATTGAGAAGGTTGTTATTTCTAAGTTTTAGTTTGAAAGATTTTTCTTACCAAGTATTTTATTATGAAGATTTTCTTTAATTGACATTTGACAAATGACAACTTTATTGATGATGGTTCTTGTAGTAAAGAACTTCAAAGTGAATCAACCAAAGCAAGAACAGGGTTTTGACGATTTTTTTGTAGGAGAACCTCTTCAGATAGCATCAAAAACTAGGGAAGAAGAAAATTTTCATGGTTTTATTGATTACTTGAATGTTGACAATGATCTGACAGTGCCAAAACCTATAGAGGAGGAGGAATTTGTTTTTGGCTTTTGATGATTATTTCAATGAAGAAGATGAACTCTTGAACACCGACAACTTTGCCAAGGGATAACTGGAGTGAAGAAGATGACTATTTTTTCAGACGAAGAGTACATTGCCAAGGGATAACTGGAGAATTCCCTATCCCTCCTGAACACCGACTAAGACTTCAACCAAAAAGTGTCATTGGGTCAAGTTGCTTTTCAATTATGTATCTGTTAATCAAGGTTATGGTTCTCTCTCTCTCTCTCTCCCTCCCTCCCAACTAAAATGTAACTGAGTATGGATCATTCAAAGAAGGTGAACATCGATTGGAAGGTGTTTCACCTTCGAAAGAAGGAGGATGGGAGGAAAGCGGTGCTAGAAGAGAGAAGAGGAGCGAAAGTGAGTCGAATGGAATTAGATTTGGGAACTTTTGCGTGGGTTAGGGATTGCCTTATGGCGATAGCGAAGTCGAAGAACCCTCTTGGCTTTTGGAGAAGGAGAAGGTTGAATGCAGCAATTATCTTCTTTCAGGTCCTGAAGAACATAAAAGGAAGATTTGGTTTATTATCTATTGAACCTAACCGAGGGAGGAAAACTTCGATTTTCATCCCAGAAGGCACCAAGTTGAAGGGGTGGGGTGCCTTGGAAGCTGCTATGACGAGCCTTCTCCCTCCCGTGGTTCCGGTTTTGAATCGAAAGCAGGAAAGGATTGCGACTGAAACCGAGGGTAGGGTCATTAAATCTAGGACCTTTGTCGAGGCCGTGAAAGAAGGCTTGGAGCCAGAAAGAGCGAAGAAGGAGACGGAAAAAGAGGAGAAGGAGAACCCCTCAGAAGAAGTCGATTTTGCCTTTGATTGTTCGACAGCAGTGATCGTTGAACGGATGTTTGTTGGTTCGGATTGGGCCGGAATCAGGGACTCGTGCTTGAGCTTAGCAAAGGTTGGTCTATCTCTAAAACCCTTCTGTGTTAATTTGGCAGTGGGACTGTGCGGAACTGCGAAGGATGCTGAAGTTCTGGTTAGGGCTGGTTCGCTGAAGCAAGACGACAGATTCTCCATTCACGCGTGGGATTTCAAGATAATTGCAGAAAGAAAATGCCAAATATTCGAGGGAGGATGGGTCACGGTTTTAGATGTCCCACCATTTTTGAGATCCATTCAAATGATTTCTTTATTAGCTGATATGTGTGGGGGATTGACAGAGGAAGAAGAAATTCTGGGTGAAGCTTGCTGGACAGACGAAGTGTGCTTTAGAGTTAAAGGGAACGACAACGGCCTTACACCTTCTTCGTGTTATCTAAACCATGGAAACACATTTTTTCCAGTGAGATTTGTGGTCGGAAAAGGGATGTCCGTCGAGAGCTCCGATGAGAGGGTGGCGTGCTCAAGAAGATCTGGAAAAATCGTACTTCAAGTGCCAGATGCAGCAGAAGTCGCAGGTCAGCAGGTTCAGGGTACGAAAAATCACGTGAAGAATGGTAAAAAGGAAGCTGAAATTGGGCTTAATATTGGGCTTGAGGCTGGTGGGCTTTCAGGGCAAAATGTGACTAATAATCTAATGGACCCAACCCTTTACGGAAAAGGAAATCTTATAAGCGAGTGCAAGGGAGATAGCAATGGGCCGACTGAGCTAGTTAATGGGCCCGAAACTGAACAATTTTTGGAGGCTATTTCTTCAGTTGCCAAGGCCGACAACGACATCGATTTAGATTGGGAGGTTGAACTTAATCATGCGGAGGATACGAGGGCCGACGAGGATAATGGCTCCGACCCATCAGTGGTTAGTTATTCGGAAGATGAATCCTTCCTATCGACTCCGGCAGCCAAAGATGTGGGAATTATGAACTTGAACGTGATTTTTTCGGAGGAGAATGAATTGGTCCAGCAACTCAACCATCCTCAGAAGGATTGTCAGCAGAATATTTCTACGGCTCTTGATATTCCCACGGAGAGGGATTCTCGAGCTACTCCGGTAAGAGTGTCTCAAGATGGCTCGGCTACGGGGGATCCGCCTCAACAGTTGATCAAGGTAAACTCGGACAATATCCCTGCCCAGGTACGCTCCCCTCCTTTGGTTCTTTCACCTTCTAATTCTTCTGTGAGGGATGGGTGGATGTGTGCGGGGGGGTTAGCCTATCAACATCCTTATTCCTTTGCTTATCCTTCGGGGGAGGGGAAGGGGGAGTTGGTGGGCCTCAACCATAATTTTGTGCAACCTATCTTTCTAAATTCTTACCAAGCCTCTGGAAGTGCCTTGACTCAACCGACCATCTATTCAATGGGAGAAGGAATTCCGACCTTTGCTTCATTAACTTGTGACTCGGGTGATAGAATTGGGGGGAACTTCCATCCTTTCCCAAATGGCCTTGTTAGTAGCATTCCTTTACCTATCTATAGTCCTTCGAACTTTGAAGGATTCCCAGCCCAAGAAAGGAATATCGGATTCTGGCAACCGGGATGGGCTGCCTTGGCTTCTGTTGGTATAAAAGAGGTTCCCATTAACCAAGACCCCAAGAATGGCTCGGTGGATGAGGAGAAAGGCAAAACTTATAGTAAAAAGGGAGGAGACTCTAAAAGAGTGGATAGAGAGTTAAGAAAATTGGAATCATCTGTGAATTACGATAGGAGAAAGGCCTCTAGGGAGGTTGGGGAATCATCGAGTTCTAAATGAAGATGCTCTCTTGGAATGTTAGAGGTCTAGGGGGGAGGGATAAGCGTCGTTTGGTTAAAGAGATTATCTCTCAGGAAAATCCGGATATTGTGGTTCTTCAGGAGACTAAGCGTTATAAGTACAATCGGGAGTTTATTCGTAGCATTTGGGGGATCAGAAAGGTGGAGTGGATAGGCATTGAGTCGGTGGGAGCGTCAGGAGGGGTGCTTGTTATGTGGGATGGTAATTCTGTTAACTGTTTGGAGGTGATGCTAGGTGTCTTCTCTGTTTCTATCAAGATTAAATGGAAGGACAAGGACTTAGGTTGGGTCACAGGTACGTATGGCCCGCCCAGGCCCAAAGGTAGGCAGGAGTTTTGGAATGAGCTTGGGGCCTTGTATGGGTTATGTGGGCATCATTGGTGCATTTTGGGTGACTTTAATGTTGTTCGTTCCCCTTCAGAAAAGGCTTCGGGAGGGAGAGCTTCGAAGTCGATAAAGTCTTTTAATGAGTGGATTGAGGACTGCAGCTTTTTTGACCCCCCTCTTTCTAATGGGAGATTCACCTGGGCTAATAGTAGGGCGCGCAGTAGGATCGATAGAGCTCTCTGCTCTAAGGGTTGGATGGATACCTTCCATGGTGTCAGACAATCCTTAGGTCCTCGAGTTACTTCTGATCATTGGCCCCTAATCCTTACGTCGGGACCTCAGAAATGGGGCCCTTGCCCTTTTCGTTTTGAGAATATGTGGTTGGATCATCCGTCCTTCAAATCTTCCTTCCCTTCGTGGTGGAATGTGGAGGCTCCTTGGAAGTGGGAAGGGTATAGGTTTATGGGTAAATTAAGAGCCCTTAGGGGAACTCTTAAGTTGTGGAACAAAGAGGTCTTCGGTGATATTAAGGTGAAGAAACAGGAAGTGGTGAGCAGGATCAATGAGATTGATTCCCAGGAAGAGAATGGGCCCTTGGATGATACCCTCAAGGAGGAACGTATTTCCCTCAAGTCTGAGTTCGCTCAGTTGGTTGAGAAAGAGACGATTAGTTGGAGGCAAAAGGCCAAAGTCAAATGGGCCAAGGATGGCGATTGTAATTCGGCCTTTTTTCATAGAATGGCTAACGGCAGAAGAAGTAAAAACATGATTGGCCCGTTGGAAAATAGTATGGGAATTCAAATTCATGGGGAAAAAGAGATCGAGGATGAAATTGTATCTTTCTTTTCCAATCTTTATGCCCCTCAGGTGACCCCCAAACCATTTGTCGAAGGAATTGATTGGTGCCCGATCTCAGATAGGGAGAAAAATGACTTAGACTCCCCTTTCTCGTTGGAGGAAATCAAGAAAGCGGTCTTCGATTGTGATAGAGATAAATCCCCAGGCCCGGATGGCTTTTCCATGGCCTTTTTTCAAGACAATTGGAAAGAGATTAAGGGGGACTTGGAACGAGTGTTTAAAGAATTCTATGAACGTGGCATCTTGGACAGTTCCTTAAATGAGACCTACGTGTGCCTTATCCCCAAGAAAGAGAGAGCTAATAGGGTTAAGGATTTTCGACCTATTAGCCTGATTACAAGCGTTTATAAGATCATTGCTAAGGTGCTCACTAAGAGGTTGAAAAAAGTTCTTCCCTCAACAATTACGGAGGCCCAGGGGGCTTTTATCGAAGGTAGACAAATTCTGGATCAAGCCCTCATTGCTAATGAGGCTATTGAGGATTATCGAGGAAGTGGTCGGGAGGGAGTGGTTTTTAAGATTGATTTTGAGAAGGCGTACGATCACGTGGATTGGAATTTTTTGGATAAGATTCTGGAGAAGAAAGGGTTTGGTTACAAATGGAGATCTTGGATTTGGAGTTGTACGAGATCTATGACCTATTCAATCCTTGTTAATGGCAGGCCCAAGGGGAGGATTCGGGCTACCCGCGACCTTCGTCAAGGAGATCCCCTCTCCCCTTTTCTTTTTCTCCTGATTGTGGATTCTCTCAGTAGAATTATTTTTAGAGGGGTGGAGGGTAAAATCATCGAAGGCTTCGAAGTGGGTCAGAATAGGATTCCCCTATCCCATCTTCAGTTTGCAGATGACACGATCTTCTTTTGTTCCGGAAAAGAGGAATCCTTTTTAATTTTGAACCATATATTAGCCTTCTTTGAATCCATGTCAGGTTTGAAAATAAATCGGGGCAAGTGCCAAATCCTGGGTCTGAATTGCGATGATAGTAAGGCAAGGAGATGGGCAGAGATTGTTGGTTGTGAAATGAGTTCGTTTCCTTCTTCTTACTTAGGTTTGCCGTTGGGTCACAACTCGAGGTTGGTCTCGTTCTGGGACCCTGTTGTGGATAAGGTGAGGAAAAGACTTGCAAGTTGGAAGAAAAGCTTCTTTTCCAAAGGAGGTAGGCTGACCCTTATTCGTTCTGTTTTAAGTGGTATCCCTATTTACTTCTTTTCCCTCTTTAGAGCCCCTTGTTCGGTCTGTAAAGTTATTGAGAAGTTGATGAGGGACTTTTTATGGGAAGGGGTGGATGAGGGCAAGAGTACGCATCTGTTGCGCTGGGATCTTGTGGGGCAATCCTTAAGGCAGGGGGGGCTAGAGATAGGTAACTTGAGGATACGTAACAAGGCTTTACTGGCAAAATGGCTTTGGAGGTTCTATTCTGATTCCAACACCCTTTGGCATAGGATTATTGTTAGTAAACACGGGCCCCACCCTTCTGAATGGGTAACGGGGGGATCAAAGGCACTTCCAGAAACCCTTGGAGAGAAATTTCGCGTGAGCTCCCTTCTTTGGCCTCTTTTATTCATTGCTCGGTGGGGAATGGGGAGGAAACTTATTTTTGGGAGGACAGATGGGTGGGGGATAGACCCCTTTGCGTTACCTTTCCTCGGCTCTATCATCTTTCCTCTATGAAAAATCATTCCGTGGCCGAGGTTCTGATTCCTTCAGGGAGCTCTCTTTCTTATTGCTTTGGCTTTGTGCGTCCGTTGTCTGATCGTGAAACAACGGACCTCGTGACTCTCCTTTCTTTGATTGGGGAAATCGCTTTTAGTACCACTAGGAAAGACTTTCGAGTCTGGAGTCCCGACCCTTCCCTCGGGTTTTCTTGTCGATCCTTCTTCCGATGCCTTTTGGACCCTGTTTCCTCTCAGCCGTCCATTTTCTCTTTATTGTGGAAGGTGAAAGTTCCAAAGAAGGTGCAGTTTTTTATTTGGCAGGTGATCCATGGAAGAGTTAATACTCTTGATCGGCTGTCCAGAAAGATTCCTAGTTTATTTGGGCCTTTTTGTTGCATTCTTTGTCGGATGGCGGAGGAAGACCTCGATCATATGTTATGGAACTGCGCTTTTGCTAGGACAGTGTGGGATGAGTTCTTTGGCTCGTTCGGGTTGCAGTTTGCCAGACACAGAGGCCTCAGAGAGACGATCGAGGAGTTCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTTTGTGGCAAGCTGGGATTTGTGCTATTATTTGGGGGTTGTGGGGTGAGAGAAACAATAGAACTTTTAGAGGGTTAGAGAGGGATCCTATTGAGGTTTGGTCCCTTGTTAAATATAATGTTTCTCTTTGGGCGTCGGTGACGCGTTTATTTTGTAATTATTCCTTAGGTCTCATCATTTTGGATTGGAGTCCCTTCATTTAA

mRNA sequence

ATGCAAAATCTGGGGTGCTGTTCCCATGGCGTGCAGGTAAACAGAATGCTTAAGCCAGACAAGTGGCAGGCAGCATTTGATAGTGATGGAAAGGCTTTGGGCTTTCAGAAGGCACTGAAATCAATAATTTTGGGGGTGAACATCGATTGGAAGGTGTTTCACCTTCGAAAGAAGGAGGATGGGAGGAAAGCGGTGCTAGAAGAGAGAAGAGGAGCGAAAGTGAGTCGAATGGAATTAGATTTGGGAACTTTTGCGTGGGTTAGGGATTGCCTTATGGCGATAGCGAAGTCGAAGAACCCTCTTGGCTTTTGGAGAAGGAGAAGGTTGAATGCAGCAATTATCTTCTTTCAGGTCCTGAAGAACATAAAAGGAAGATTTGGTTTATTATCTATTGAACCTAACCGAGGGAGGAAAACTTCGATTTTCATCCCAGAAGGCACCAAGTTGAAGGGGTGGGGTGCCTTGGAAGCTGCTATGACGAGCCTTCTCCCTCCCGTGGTTCCGGTTTTGAATCGAAAGCAGGAAAGGATTGCGACTGAAACCGAGGGTAGGGTCATTAAATCTAGGACCTTTGTCGAGGCCGTGAAAGAAGGCTTGGAGCCAGAAAGAGCGAAGAAGGAGACGGAAAAAGAGGAGAAGGAGAACCCCTCAGAAGAAGTCGATTTTGCCTTTGATTGTTCGACAGCAGTGATCGTTGAACGGATGTTTGTTGGTTCGGATTGGGCCGGAATCAGGGACTCGTGCTTGAGCTTAGCAAAGGTTGGTCTATCTCTAAAACCCTTCTGTGTTAATTTGGCAGTGGGACTGTGCGGAACTGCGAAGGATGCTGAAGTTCTGGTTAGGGCTGGTTCGCTGAAGCAAGACGACAGATTCTCCATTCACGCGTGGGATTTCAAGATAATTGCAGAAAGAAAATGCCAAATATTCGAGGGAGGATGGGTCACGGTTTTAGATGTCCCACCATTTTTGAGATCCATTCAAATGATTTCTTTATTAGCTGATATGTGTGGGGGATTGACAGAGGAAGAAGAAATTCTGGGTGAAGCTTGCTGGACAGACGAAGTGTGCTTTAGAGTTAAAGGGAACGACAACGGCCTTACACCTTCTTCGTGTTATCTAAACCATGGAAACACATTTTTTCCAGTGAGATTTGTGGTCGGAAAAGGGATGTCCGTCGAGAGCTCCGATGAGAGGGTGGCGTGCTCAAGAAGATCTGGAAAAATCGTACTTCAAGTGCCAGATGCAGCAGAAGTCGCAGGTCAGCAGGTTCAGGGTACGAAAAATCACGTGAAGAATGGTAAAAAGGAAGCTGAAATTGGGCTTAATATTGGGCTTGAGGCTGGTGGGCTTTCAGGGCAAAATGTGACTAATAATCTAATGGACCCAACCCTTTACGGAAAAGGAAATCTTATAAGCGAGTGCAAGGGAGATAGCAATGGGCCGACTGAGCTAGTTAATGGGCCCGAAACTGAACAATTTTTGGAGGCTATTTCTTCAGTTGCCAAGGCCGACAACGACATCGATTTAGATTGGGAGGTTGAACTTAATCATGCGGAGGATACGAGGGCCGACGAGGATAATGGCTCCGACCCATCAGTGGTTAGTTATTCGGAAGATGAATCCTTCCTATCGACTCCGGCAGCCAAAGATGTGGGAATTATGAACTTGAACGTGATTTTTTCGGAGGAGAATGAATTGGTCCAGCAACTCAACCATCCTCAGAAGGATTGTCAGCAGAATATTTCTACGGCTCTTGATATTCCCACGGAGAGGGATTCTCGAGCTACTCCGGTAAGAGTGTCTCAAGATGGCTCGGCTACGGGGGATCCGCCTCAACAGTTGATCAAGGTAAACTCGGACAATATCCCTGCCCAGGTACGCTCCCCTCCTTTGGTTCTTTCACCTTCTAATTCTTCTGTGAGGGATGGGTGGATGTGTGCGGGGGGGTTAGCCTATCAACATCCTTATTCCTTTGCTTATCCTTCGGGGGAGGGGAAGGGGGAGTTGGTGGGCCTCAACCATAATTTTGTGCAACCTATCTTTCTAAATTCTTACCAAGCCTCTGGAAGTGCCTTGACTCAACCGACCATCTATTCAATGGGAGAAGGAATTCCGACCTTTGCTTCATTAACTTGTGACTCGGGTGATAGAATTGGGGGGAACTTCCATCCTTTCCCAAATGGCCTTGTTAGTAGCATTCCTTTACCTATCTATAGTCCTTCGAACTTTGAAGGATTCCCAGCCCAAGAAAGGAATATCGGATTCTGGCAACCGGGATGGGCTGCCTTGGCTTCTGTTGGTATAAAAGAGGTTCCCATTAACCAAGACCCCAAGAATGGCTCGGTGGATGAGGAGAAAGGCAAAACTTATAGTAAAAAGGGAGGAGACTCTAAAAGAGTGGATAGAGAGTTAAGAAAATTGGAATCATCTGTGAATTACGATAGGAGAAAGGCCTCTAGGGAGGAGACTAAGCGTTATAAGTACAATCGGGAGTTTATTCGTAGCATTTGGGGGATCAGAAAGGTGGAGTGGATAGGCATTGAGTCGGTGGGAGCGTCAGGAGGGGTGCTTGTTATGTGGGATGGTAATTCTGTTAACTGTTTGGAGGTGATGCTAGGTGTCTTCTCTGTTTCTATCAAGATTAAATGGAAGGACAAGGACTTAGGTTGGGTCACAGGTACGTATGGCCCGCCCAGGCCCAAAGGTAGGCAGGAGTTTTGGAATGAGCTTGGGGCCTTGTATGGGTTATGTGGGCATCATTGGTGCATTTTGGGTGACTTTAATGTTGTTCGTTCCCCTTCAGAAAAGGCTTCGGGAGGGAGAGCTTCGAAGTCGATAAAGTCTTTTAATGAGTGGATTGAGGACTGCAGCTTTTTTGACCCCCCTCTTTCTAATGGGAGATTCACCTGGGCTAATAGTAGGGCGCGCAGTAGGATCGATAGAGCTCTCTGCTCTAAGGGTTGGATGGATACCTTCCATGGTGTCAGACAATCCTTAGGTCCTCGAGTTACTTCTGATCATTGGCCCCTAATCCTTACGTCGGGACCTCAGAAATGGGGCCCTTGCCCTTTTCGTTTTGAGAATATGTGGTTGGATCATCCGTCCTTCAAATCTTCCTTCCCTTCGTGGTGGAATGTGGAGGCTCCTTGGAAGTGGGAAGGGTATAGGTTTATGGGGAGCTCTCTTTCTTATTGCTTTGGCTTTGTGCGTCCGTTGTCTGATCGTGAAACAACGGACCTCGTGACTCTCCTTTCTTTGATTGGGGAAATCGCTTTTAGTACCACTAGGAAAGACTTTCGAGTCTGGAGTCCCGACCCTTCCCTCGGGTTTTCTTGTCGATCCTTCTTCCGATGCCTTTTGGACCCTGTTTCCTCTCAGCCGTCCATTTTCTCTTTATTGTGGAAGGTGAAAGTTCCAAAGAAGGTGCAGTTTTTTATTTGGCAGGTGATCCATGGAAGAGTTAATACTCTTGATCGGCTGTCCAGAAAGATTCCTAGTTTATTTGGGCCTTTTTGTTGCATTCTTTGTCGGATGGCGGAGGAAGACCTCGATCATATGTTATGGAACTGCGCTTTTGCTAGGACAGTGTGGGATGAGTTCTTTGGCTCGTTCGGGTTGCAGTTTGCCAGACACAGAGGCCTCAGAGAGACGATCGAGGAGTTCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTTTGTGGCAAGCTGGGATTTGTGCTATTATTTGGGGGTTGTGGGGTGAGAGAAACAATAGAACTTTTAGAGGGTTAGAGAGGGATCCTATTGAGGTTTGGTCCCTTGTTAAATATAATGTTTCTCTTTGGGCGTCGGTGACGCGTTTATTTTGTAATTATTCCTTAGGTCTCATCATTTTGGATTGGAGTCCCTTCATTTAA

Coding sequence (CDS)

ATGCAAAATCTGGGGTGCTGTTCCCATGGCGTGCAGGTAAACAGAATGCTTAAGCCAGACAAGTGGCAGGCAGCATTTGATAGTGATGGAAAGGCTTTGGGCTTTCAGAAGGCACTGAAATCAATAATTTTGGGGGTGAACATCGATTGGAAGGTGTTTCACCTTCGAAAGAAGGAGGATGGGAGGAAAGCGGTGCTAGAAGAGAGAAGAGGAGCGAAAGTGAGTCGAATGGAATTAGATTTGGGAACTTTTGCGTGGGTTAGGGATTGCCTTATGGCGATAGCGAAGTCGAAGAACCCTCTTGGCTTTTGGAGAAGGAGAAGGTTGAATGCAGCAATTATCTTCTTTCAGGTCCTGAAGAACATAAAAGGAAGATTTGGTTTATTATCTATTGAACCTAACCGAGGGAGGAAAACTTCGATTTTCATCCCAGAAGGCACCAAGTTGAAGGGGTGGGGTGCCTTGGAAGCTGCTATGACGAGCCTTCTCCCTCCCGTGGTTCCGGTTTTGAATCGAAAGCAGGAAAGGATTGCGACTGAAACCGAGGGTAGGGTCATTAAATCTAGGACCTTTGTCGAGGCCGTGAAAGAAGGCTTGGAGCCAGAAAGAGCGAAGAAGGAGACGGAAAAAGAGGAGAAGGAGAACCCCTCAGAAGAAGTCGATTTTGCCTTTGATTGTTCGACAGCAGTGATCGTTGAACGGATGTTTGTTGGTTCGGATTGGGCCGGAATCAGGGACTCGTGCTTGAGCTTAGCAAAGGTTGGTCTATCTCTAAAACCCTTCTGTGTTAATTTGGCAGTGGGACTGTGCGGAACTGCGAAGGATGCTGAAGTTCTGGTTAGGGCTGGTTCGCTGAAGCAAGACGACAGATTCTCCATTCACGCGTGGGATTTCAAGATAATTGCAGAAAGAAAATGCCAAATATTCGAGGGAGGATGGGTCACGGTTTTAGATGTCCCACCATTTTTGAGATCCATTCAAATGATTTCTTTATTAGCTGATATGTGTGGGGGATTGACAGAGGAAGAAGAAATTCTGGGTGAAGCTTGCTGGACAGACGAAGTGTGCTTTAGAGTTAAAGGGAACGACAACGGCCTTACACCTTCTTCGTGTTATCTAAACCATGGAAACACATTTTTTCCAGTGAGATTTGTGGTCGGAAAAGGGATGTCCGTCGAGAGCTCCGATGAGAGGGTGGCGTGCTCAAGAAGATCTGGAAAAATCGTACTTCAAGTGCCAGATGCAGCAGAAGTCGCAGGTCAGCAGGTTCAGGGTACGAAAAATCACGTGAAGAATGGTAAAAAGGAAGCTGAAATTGGGCTTAATATTGGGCTTGAGGCTGGTGGGCTTTCAGGGCAAAATGTGACTAATAATCTAATGGACCCAACCCTTTACGGAAAAGGAAATCTTATAAGCGAGTGCAAGGGAGATAGCAATGGGCCGACTGAGCTAGTTAATGGGCCCGAAACTGAACAATTTTTGGAGGCTATTTCTTCAGTTGCCAAGGCCGACAACGACATCGATTTAGATTGGGAGGTTGAACTTAATCATGCGGAGGATACGAGGGCCGACGAGGATAATGGCTCCGACCCATCAGTGGTTAGTTATTCGGAAGATGAATCCTTCCTATCGACTCCGGCAGCCAAAGATGTGGGAATTATGAACTTGAACGTGATTTTTTCGGAGGAGAATGAATTGGTCCAGCAACTCAACCATCCTCAGAAGGATTGTCAGCAGAATATTTCTACGGCTCTTGATATTCCCACGGAGAGGGATTCTCGAGCTACTCCGGTAAGAGTGTCTCAAGATGGCTCGGCTACGGGGGATCCGCCTCAACAGTTGATCAAGGTAAACTCGGACAATATCCCTGCCCAGGTACGCTCCCCTCCTTTGGTTCTTTCACCTTCTAATTCTTCTGTGAGGGATGGGTGGATGTGTGCGGGGGGGTTAGCCTATCAACATCCTTATTCCTTTGCTTATCCTTCGGGGGAGGGGAAGGGGGAGTTGGTGGGCCTCAACCATAATTTTGTGCAACCTATCTTTCTAAATTCTTACCAAGCCTCTGGAAGTGCCTTGACTCAACCGACCATCTATTCAATGGGAGAAGGAATTCCGACCTTTGCTTCATTAACTTGTGACTCGGGTGATAGAATTGGGGGGAACTTCCATCCTTTCCCAAATGGCCTTGTTAGTAGCATTCCTTTACCTATCTATAGTCCTTCGAACTTTGAAGGATTCCCAGCCCAAGAAAGGAATATCGGATTCTGGCAACCGGGATGGGCTGCCTTGGCTTCTGTTGGTATAAAAGAGGTTCCCATTAACCAAGACCCCAAGAATGGCTCGGTGGATGAGGAGAAAGGCAAAACTTATAGTAAAAAGGGAGGAGACTCTAAAAGAGTGGATAGAGAGTTAAGAAAATTGGAATCATCTGTGAATTACGATAGGAGAAAGGCCTCTAGGGAGGAGACTAAGCGTTATAAGTACAATCGGGAGTTTATTCGTAGCATTTGGGGGATCAGAAAGGTGGAGTGGATAGGCATTGAGTCGGTGGGAGCGTCAGGAGGGGTGCTTGTTATGTGGGATGGTAATTCTGTTAACTGTTTGGAGGTGATGCTAGGTGTCTTCTCTGTTTCTATCAAGATTAAATGGAAGGACAAGGACTTAGGTTGGGTCACAGGTACGTATGGCCCGCCCAGGCCCAAAGGTAGGCAGGAGTTTTGGAATGAGCTTGGGGCCTTGTATGGGTTATGTGGGCATCATTGGTGCATTTTGGGTGACTTTAATGTTGTTCGTTCCCCTTCAGAAAAGGCTTCGGGAGGGAGAGCTTCGAAGTCGATAAAGTCTTTTAATGAGTGGATTGAGGACTGCAGCTTTTTTGACCCCCCTCTTTCTAATGGGAGATTCACCTGGGCTAATAGTAGGGCGCGCAGTAGGATCGATAGAGCTCTCTGCTCTAAGGGTTGGATGGATACCTTCCATGGTGTCAGACAATCCTTAGGTCCTCGAGTTACTTCTGATCATTGGCCCCTAATCCTTACGTCGGGACCTCAGAAATGGGGCCCTTGCCCTTTTCGTTTTGAGAATATGTGGTTGGATCATCCGTCCTTCAAATCTTCCTTCCCTTCGTGGTGGAATGTGGAGGCTCCTTGGAAGTGGGAAGGGTATAGGTTTATGGGGAGCTCTCTTTCTTATTGCTTTGGCTTTGTGCGTCCGTTGTCTGATCGTGAAACAACGGACCTCGTGACTCTCCTTTCTTTGATTGGGGAAATCGCTTTTAGTACCACTAGGAAAGACTTTCGAGTCTGGAGTCCCGACCCTTCCCTCGGGTTTTCTTGTCGATCCTTCTTCCGATGCCTTTTGGACCCTGTTTCCTCTCAGCCGTCCATTTTCTCTTTATTGTGGAAGGTGAAAGTTCCAAAGAAGGTGCAGTTTTTTATTTGGCAGGTGATCCATGGAAGAGTTAATACTCTTGATCGGCTGTCCAGAAAGATTCCTAGTTTATTTGGGCCTTTTTGTTGCATTCTTTGTCGGATGGCGGAGGAAGACCTCGATCATATGTTATGGAACTGCGCTTTTGCTAGGACAGTGTGGGATGAGTTCTTTGGCTCGTTCGGGTTGCAGTTTGCCAGACACAGAGGCCTCAGAGAGACGATCGAGGAGTTCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTTTGTGGCAAGCTGGGATTTGTGCTATTATTTGGGGGTTGTGGGGTGAGAGAAACAATAGAACTTTTAGAGGGTTAGAGAGGGATCCTATTGAGGTTTGGTCCCTTGTTAAATATAATGTTTCTCTTTGGGCGTCGGTGACGCGTTTATTTTGTAATTATTCCTTAGGTCTCATCATTTTGGATTGGAGTCCCTTCATTTAA

Protein sequence

MQNLGCCSHGVQVNRMLKPDKWQAAFDSDGKALGFQKALKSIILGVNIDWKVFHLRKKEDGRKAVLEERRGAKVSRMELDLGTFAWVRDCLMAIAKSKNPLGFWRRRRLNAAIIFFQVLKNIKGRFGLLSIEPNRGRKTSIFIPEGTKLKGWGALEAAMTSLLPPVVPVLNRKQERIATETEGRVIKSRTFVEAVKEGLEPERAKKETEKEEKENPSEEVDFAFDCSTAVIVERMFVGSDWAGIRDSCLSLAKVGLSLKPFCVNLAVGLCGTAKDAEVLVRAGSLKQDDRFSIHAWDFKIIAERKCQIFEGGWVTVLDVPPFLRSIQMISLLADMCGGLTEEEEILGEACWTDEVCFRVKGNDNGLTPSSCYLNHGNTFFPVRFVVGKGMSVESSDERVACSRRSGKIVLQVPDAAEVAGQQVQGTKNHVKNGKKEAEIGLNIGLEAGGLSGQNVTNNLMDPTLYGKGNLISECKGDSNGPTELVNGPETEQFLEAISSVAKADNDIDLDWEVELNHAEDTRADEDNGSDPSVVSYSEDESFLSTPAAKDVGIMNLNVIFSEENELVQQLNHPQKDCQQNISTALDIPTERDSRATPVRVSQDGSATGDPPQQLIKVNSDNIPAQVRSPPLVLSPSNSSVRDGWMCAGGLAYQHPYSFAYPSGEGKGELVGLNHNFVQPIFLNSYQASGSALTQPTIYSMGEGIPTFASLTCDSGDRIGGNFHPFPNGLVSSIPLPIYSPSNFEGFPAQERNIGFWQPGWAALASVGIKEVPINQDPKNGSVDEEKGKTYSKKGGDSKRVDRELRKLESSVNYDRRKASREETKRYKYNREFIRSIWGIRKVEWIGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHWCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRARSRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQKWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPWKWEGYRFMGSSLSYCFGFVRPLSDRETTDLVTLLSLIGEIAFSTTRKDFRVWSPDPSLGFSCRSFFRCLLDPVSSQPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPSLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGLQFARHRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDPIEVWSLVKYNVSLWASVTRLFCNYSLGLIILDWSPFI

Homology

[Close]

BLAST of Spg028609 vs. NCBI nr
Match: XP_028075126.1 (uncharacterized protein LOC114277426 [Camellia sinensis])

HSP 1 Score: 265.8 bits (678), Expect = 2.0e-66
Identity = 120/241 (49.79%), Postives = 163/241 (67.63%), Query Frame = 0


Query: 821  EETKRYKYNREFIRSIWGIRKVEWIGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIK 880
            +ETK  + +R FIRS+WG R   W  + S G SGG+L+MWD   V+  EV++GVFS+SIK
Sbjct: 35   QETKCEECDRVFIRSVWGTRFRRWAVLPSTGRSGGILIMWDDRVVSECEVVVGVFSLSIK 94

Query: 881  IKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHWCILGDFNVVRSPSEKASGG 940
             + +D    W+TG YGP RP  RQ++W+ELG L+GLC  +WC+  DFNVVR  SEK +G 
Sbjct: 95   FRNRDNKEWWLTGVYGPNRPWSRQDWWDELGGLFGLCTPNWCVGWDFNVVRLASEKLNGV 154

Query: 941  RASKSIKSFNEWIEDCSFFDPPLSNGRFTWAN---SRARSRIDRALCSKGWMDTFHGVRQ 1000
              ++S++ F+ +I +C   DPPLSN RFTW+N   +R   R+DR L + GW + F  +R+
Sbjct: 155  STNRSMRDFDSFIRECELIDPPLSNARFTWSNLQENRVCRRLDRFLHTLGWEELFLNIRK 214

Query: 1001 SLGPRVTSDHWPLILTSGPQKWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPWKWEGYRF 1059
             + PRV SDH+P+IL S P KWGP PFRFENMWL++ SFK  F  WW       WEG++F
Sbjct: 215  EVRPRVVSDHFPVILESCPFKWGPSPFRFENMWLENRSFKEFFRDWWENGRVHGWEGFKF 274

[Close]

BLAST of Spg028609 vs. NCBI nr
Match: RVW20303.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 245.0 bits (624), Expect = 3.6e-60
Identity = 112/241 (46.47%), Postives = 149/241 (61.83%), Query Frame = 0


Query: 821  EETKRYKYNREFIRSIWGIRKVEWIGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIK 880
            +ETK+ + +R F+ S+W  R  EW  + + GASGG+LVMWD   ++  EV+LG FSVS+K
Sbjct: 3    QETKKAECDRRFVGSVWTARNKEWAVLPACGASGGILVMWDSKKLHNEEVVLGSFSVSVK 62

Query: 881  IKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHWCILGDFNVVRSPSEKASGG 940
                  +  W++  YGP     R++FW EL  ++GL    WC+ GDFNV+R  SEK  GG
Sbjct: 63   FAVDGSEQFWLSAIYGPNSTALRKDFWEELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGG 122

Query: 941  RASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQ 1000
            R + S+K  +++I +    DPPL +  FTW+N +      R+DR L S  W   F    Q
Sbjct: 123  RLTPSMKDLDDFIRENELIDPPLRSASFTWSNMQEHPVCKRLDRFLYSNEWEQLFPQSLQ 182

Query: 1001 SLGPRVTSDHWPLILTSGPQKWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPWKWEGYRF 1059
             + PR TSDHWP++L S P KWGP PFRFENMWL HPSFK SF SWW       WEG++F
Sbjct: 183  DVLPRWTSDHWPIVLESNPFKWGPTPFRFENMWLHHPSFKESFGSWWREFQGDGWEGHKF 242

[Close]

BLAST of Spg028609 vs. NCBI nr
Match: RVW20303.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 125.6 bits (314), Expect = 3.2e-24
Identity = 66/209 (31.58%), Postives = 104/209 (49.76%), Query Frame = 0


Query: 1090 IAFSTTRKDFRVWSPDPSLGFSCRSFFRCLLDPVSSQPSIF--SLLWKVKVPKKVQFFIW 1149
            +  S +  D R WS   S  F+ +SFF   L  +S  PS+F  +L+W  +VP K++ F+W
Sbjct: 873  LGLSPSVPDKRSWSLSSSGLFTVKSFF-LALSQISGLPSVFPTNLVWNSQVPFKIKSFVW 932

Query: 1150 QVIHGRVNTLDRLSRKIP-SLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGL 1209
             V H +VNT D L  + P     P  C+LC    E +DH+  +C+    +W   F    +
Sbjct: 933  LVAHKKVNTNDMLQWRRPYKTLSPDICMLCMEQGETVDHLFLHCSMTMGLWHRLFQLTKI 992

Query: 1210 QFARHRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDPIEVW 1269
             +   R + + I          ++G  LWQ    AI+W +W ERN R F    ++   +W
Sbjct: 993  DWVPPRSVFDMIAINFNGFGSSKRGIVLWQVACIAILWVVWRERNARIFEDKSKNSENLW 1052

Query: 1270 SLVKYNVSLWASVTRLFCNYSLGLIILDW 1296
             ++ +  SLW S +++F    L +I LDW
Sbjct: 1053 DMIHFLASLWVSCSKVFKGIPLNVIQLDW 1080

HSP 2 Score: 243.0 bits (619), Expect = 1.4e-59
Identity = 113/223 (50.67%), Postives = 150/223 (67.26%), Query Frame = 0


Query: 821  EETKRYKYNREFIRSIWGIRKVEWIGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIK 880
            +ETK  + +R FIRS+WG R   W  + S G SGG+L+MWD   V+  EV+ GVFS+SI 
Sbjct: 19   QETKCEECDRIFIRSVWGTRFRRWAVLPSTGRSGGILIMWDDRVVSKCEVVAGVFSLSIN 78

Query: 881  IKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHWCILGDFNVVRSPSEKASGG 940
             + +D  + W+TG YGP +P  RQE+W+EL  L+GLC  +WC+ GDFNVVR  SEK +G 
Sbjct: 79   FRNRDNKVWWLTGVYGPIKPGSRQEWWDELAGLFGLCSPNWCVGGDFNVVRLASEKLNGV 138

Query: 941  RASKSIKSFNEWIEDCSFFDPPLSNGRFTWAN---SRARSRIDRALCSKGWMDTFHGVRQ 1000
              S+S++ F+ +I DC   D PLSN RFTW+N   +R   ++DR L + G  + F  +RQ
Sbjct: 139  STSRSMRDFDSFIRDCELIDLPLSNARFTWSNLQENRVCCKLDRFLHTLGCKELFPDIRQ 198

Query: 1001 SLGPRVTSDHWPLILTSGPQKWGPCPFRFENMWLDHPSFKSSF 1041
             +GPRV SDH P+IL S P KWGP  FRFENMWL++ SFK  F
Sbjct: 199  EVGPRVVSDHCPMILESCPFKWGPNLFRFENMWLENRSFKEFF 241

[Close]

BLAST of Spg028609 vs. NCBI nr
Match: BBH07150.1 (TatD related DNase [Prunus dulcis])

HSP 1 Score: 242.3 bits (617), Expect = 2.4e-59
Identity = 111/240 (46.25%), Postives = 150/240 (62.50%), Query Frame = 0


Query: 822  ETKRYKYNREFIRSIWGIRKVEWIGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKI 881
            ETK+   +R+ +  +WG R  EW+   S+G SGG+ V+W+  SV+ ++ M+G FSVSI+I
Sbjct: 24   ETKKEIVDRQLVTGVWGSRFKEWVFSPSLGRSGGIAVLWNSQSVSVIDSMVGEFSVSIRI 83

Query: 882  KWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHWCILGDFNVVRSPSEKASGGR 941
                    W++G YGP R + R  FW EL  LYG CG  WC+ GDFNVVR  +EK++ GR
Sbjct: 84   VENIGTDWWLSGIYGPCRQRERISFWEELADLYGYCGDKWCLGGDFNVVRFSAEKSNEGR 143

Query: 942  ASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRARS---RIDRALCSKGWMDTFHGVRQS 1001
             +KS++ FN++I++ +  DP L N  FTW+N R  +   R+DR L S  W D F   R  
Sbjct: 144  VTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWEDHFPHYRHK 203

Query: 1002 LGPRVTSDHWPLILTSGPQKWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPWKWEGYRFM 1059
              PR+TSDH P+ L +   KWGP PFRFENMWL HP FK     WW+ +    WEGY+FM
Sbjct: 204  ALPRITSDHCPIELDTSRVKWGPSPFRFENMWLKHPDFKRKIKLWWDEDQTPGWEGYKFM 263

[Close]

BLAST of Spg028609 vs. NCBI nr
Match: VVA20479.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 241.9 bits (616), Expect = 3.1e-59
Identity = 111/240 (46.25%), Postives = 150/240 (62.50%), Query Frame = 0


Query: 822  ETKRYKYNREFIRSIWGIRKVEWIGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKI 881
            ETK+   +R+ +  +WG R  EW+   S+G SGG+ V+W+  SV+ ++ M+G FSVSI+I
Sbjct: 43   ETKKEIVDRQLVTGVWGSRFKEWVFSPSLGRSGGIAVLWNSQSVSVIDSMVGDFSVSIRI 102

Query: 882  KWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHWCILGDFNVVRSPSEKASGGR 941
                    W++G YGP R + R  FW EL  LYG CG  WC+ GDFNVVR  +EK++ GR
Sbjct: 103  VENIGTDWWLSGIYGPCRQRERISFWEELADLYGYCGDKWCLGGDFNVVRFSAEKSNEGR 162

Query: 942  ASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRARS---RIDRALCSKGWMDTFHGVRQS 1001
             +KS++ FN++I++ +  DP L N  FTW+N R  +   R+DR L S  W D F   R  
Sbjct: 163  VTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWEDHFPHYRHK 222

Query: 1002 LGPRVTSDHWPLILTSGPQKWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPWKWEGYRFM 1059
              PR+TSDH P+ L +   KWGP PFRFENMWL HP FK     WW+ +    WEGY+FM
Sbjct: 223  ALPRITSDHCPIELDTSRVKWGPSPFRFENMWLKHPDFKRKIKLWWDEDQTPGWEGYKFM 282

[Close]

BLAST of Spg028609 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.0e-06
Identity = 44/165 (26.67%), Postives = 65/165 (39.39%), Query Frame = 0


Query: 1094 TTRKDFRVWSPDPSLGFSCRSFFRCLL---DPVSSQPSIFSLLWKVKVPKKVQFFIWQVI 1153
            T  +D   W       FS RS +  L     P  +  S F+ LWKV+VP++V+ F+W V 
Sbjct: 249  TGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVG 308

Query: 1154 HGRVNTLDRLSRKIPSLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGLQFAR 1213
            +  V T +   R+   L     C +C+   E + H+L +C     +W         Q   
Sbjct: 309  NQAVMTEEERHRR--HLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFF 368

Query: 1214 HRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTF 1256
             + L E + + L      E     W      IIW  W  R    F
Sbjct: 369  SKSLFEWLYDNLGDRSGCED--IPWSTIFAVIIWWGWKWRCGNIF 409

[Close]

BLAST of Spg028609 vs. ExPASy TrEMBL
Match: A0A438CAL5 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_340 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.8e-60
Identity = 112/241 (46.47%), Postives = 149/241 (61.83%), Query Frame = 0


Query: 821  EETKRYKYNREFIRSIWGIRKVEWIGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIK 880
            +ETK+ + +R F+ S+W  R  EW  + + GASGG+LVMWD   ++  EV+LG FSVS+K
Sbjct: 3    QETKKAECDRRFVGSVWTARNKEWAVLPACGASGGILVMWDSKKLHNEEVVLGSFSVSVK 62

Query: 881  IKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHWCILGDFNVVRSPSEKASGG 940
                  +  W++  YGP     R++FW EL  ++GL    WC+ GDFNV+R  SEK  GG
Sbjct: 63   FAVDGSEQFWLSAIYGPNSTALRKDFWEELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGG 122

Query: 941  RASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQ 1000
            R + S+K  +++I +    DPPL +  FTW+N +      R+DR L S  W   F    Q
Sbjct: 123  RLTPSMKDLDDFIRENELIDPPLRSASFTWSNMQEHPVCKRLDRFLYSNEWEQLFPQSLQ 182

Query: 1001 SLGPRVTSDHWPLILTSGPQKWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPWKWEGYRF 1059
             + PR TSDHWP++L S P KWGP PFRFENMWL HPSFK SF SWW       WEG++F
Sbjct: 183  DVLPRWTSDHWPIVLESNPFKWGPTPFRFENMWLHHPSFKESFGSWWREFQGDGWEGHKF 242

[Close]

BLAST of Spg028609 vs. ExPASy TrEMBL
Match: A0A438CAL5 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_340 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.6e-24
Identity = 66/209 (31.58%), Postives = 104/209 (49.76%), Query Frame = 0


Query: 1090 IAFSTTRKDFRVWSPDPSLGFSCRSFFRCLLDPVSSQPSIF--SLLWKVKVPKKVQFFIW 1149
            +  S +  D R WS   S  F+ +SFF   L  +S  PS+F  +L+W  +VP K++ F+W
Sbjct: 873  LGLSPSVPDKRSWSLSSSGLFTVKSFF-LALSQISGLPSVFPTNLVWNSQVPFKIKSFVW 932

Query: 1150 QVIHGRVNTLDRLSRKIP-SLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGL 1209
             V H +VNT D L  + P     P  C+LC    E +DH+  +C+    +W   F    +
Sbjct: 933  LVAHKKVNTNDMLQWRRPYKTLSPDICMLCMEQGETVDHLFLHCSMTMGLWHRLFQLTKI 992

Query: 1210 QFARHRGLRETIEEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDPIEVW 1269
             +   R + + I          ++G  LWQ    AI+W +W ERN R F    ++   +W
Sbjct: 993  DWVPPRSVFDMIAINFNGFGSSKRGIVLWQVACIAILWVVWRERNARIFEDKSKNSENLW 1052

Query: 1270 SLVKYNVSLWASVTRLFCNYSLGLIILDW 1296
             ++ +  SLW S +++F    L +I LDW
Sbjct: 1053 DMIHFLASLWVSCSKVFKGIPLNVIQLDW 1080

HSP 2 Score: 243.0 bits (619), Expect = 6.7e-60
Identity = 117/257 (45.53%), Postives = 156/257 (60.70%), Query Frame = 0


Query: 829  NREFIRSIWGIRKVEWIGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDL 888
            +R+ +  +WG R  EW+   S+G SGG+ V+W+  SV+ ++ M+G FSVSI+I       
Sbjct: 33   DRQLVAGVWGSRFKEWVFSPSLGRSGGIAVLWNSQSVSVIDSMVGEFSVSIRIVENIGTD 92

Query: 889  GWVTGTYGPPRPKGRQEFWNELGALYGLCGHHWCILGDFNVVRSPSEKASGGRASKSIKS 948
             W++G YGP R + R  FW EL  LYG CG  WC+ GDFNVVR  +EK++ GR +KS++ 
Sbjct: 93   WWLSGIYGPCRQRERNSFWEELADLYGYCGDKWCLGGDFNVVRFSAEKSNEGRVTKSMRD 152

Query: 949  FNEWIEDCSFFDPPLSNGRFTWANSRARS---RIDRALCSKGWMDTFHGVRQSLGPRVTS 1008
            FN++I++ +  DP L N  FTW+N R  +   R+DR L S  W D F   R    PR+TS
Sbjct: 153  FNDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWEDHFPHYRHKALPRITS 212

Query: 1009 DHWPLILTSGPQKWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPWKWEGYRFMGSSLSYC 1068
            DH P+ L +   KWGP PFRFENMWL+HP FK     WW  +    WEGY+FM S     
Sbjct: 213  DHCPIELDTSRVKWGPSPFRFENMWLNHPDFKRKIKLWWGEDQILGWEGYKFMTS--KEV 272

Query: 1069 FGFV-RPLSDRETTDLV 1082
            FG V R L + E   LV
Sbjct: 273  FGDVERDLREAEARLLV 287

[Close]

BLAST of Spg028609 vs. ExPASy TrEMBL
Match: A0A4Y1RS61 (TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_019005 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.1e-59
Identity = 111/240 (46.25%), Postives = 150/240 (62.50%), Query Frame = 0


Query: 822  ETKRYKYNREFIRSIWGIRKVEWIGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKI 881
            ETK+   +R+ +  +WG R  EW+   S+G SGG+ V+W+  SV+ ++ M+G FSVSI+I
Sbjct: 24   ETKKEIVDRQLVTGVWGSRFKEWVFSPSLGRSGGIAVLWNSQSVSVIDSMVGEFSVSIRI 83

Query: 882  KWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHWCILGDFNVVRSPSEKASGGR 941
                    W++G YGP R + R  FW EL  LYG CG  WC+ GDFNVVR  +EK++ GR
Sbjct: 84   VENIGTDWWLSGIYGPCRQRERISFWEELADLYGYCGDKWCLGGDFNVVRFSAEKSNEGR 143

Query: 942  ASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRARS---RIDRALCSKGWMDTFHGVRQS 1001
             +KS++ FN++I++ +  DP L N  FTW+N R  +   R+DR L S  W D F   R  
Sbjct: 144  VTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWEDHFPHYRHK 203

Query: 1002 LGPRVTSDHWPLILTSGPQKWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPWKWEGYRFM 1059
              PR+TSDH P+ L +   KWGP PFRFENMWL HP FK     WW+ +    WEGY+FM
Sbjct: 204  ALPRITSDHCPIELDTSRVKWGPSPFRFENMWLKHPDFKRKIKLWWDEDQTPGWEGYKFM 263

[Close]

BLAST of Spg028609 vs. ExPASy TrEMBL
Match: A5CAA2 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_030956 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.5e-59
Identity = 109/241 (45.23%), Postives = 147/241 (61.00%), Query Frame = 0


Query: 821  EETKRYKYNREFIRSIWGIRKVEWIGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIK 880
            +ETK+ + +R F+ S+W  R  +W  + + GASGG+L++WD   ++  EVMLG FSVSIK
Sbjct: 864  QETKKEECDRRFVGSVWTARNKDWAALPACGASGGILIIWDTKKLSREEVMLGSFSVSIK 923

Query: 881  IKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHWCILGDFNVVRSPSEKASGG 940
                  +  W++  YGP     R++ W EL  + GL    WC+ GDFNV+R  SEK  G 
Sbjct: 924  FTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGS 983

Query: 941  RASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQ 1000
            R + S+K F+++I DC   D PL +  FTW+N +      R+DR L S  W  TF    Q
Sbjct: 984  RLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRFLYSNEWEQTFPQSIQ 1043

Query: 1001 SLGPRVTSDHWPLILTSGPQKWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPWKWEGYRF 1059
             + PR TSDHWP++L + P KWGP PFRFENMWL HPSFK +F  WW       WEG++F
Sbjct: 1044 GVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKF 1103

[Close]

BLAST of Spg028609 vs. ExPASy TrEMBL
Match: A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.5e-59
Identity = 109/241 (45.23%), Postives = 147/241 (61.00%), Query Frame = 0


Query: 821  EETKRYKYNREFIRSIWGIRKVEWIGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIK 880
            +ETK+ + +R F+ S+W  R  +W  + + GASGG+L++WD   ++  EVMLG FSVSIK
Sbjct: 846  QETKKEECDRRFVGSVWTARNKDWAALPACGASGGILIIWDTKKLSREEVMLGSFSVSIK 905

Query: 881  IKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHWCILGDFNVVRSPSEKASGG 940
                  +  W++  YGP     R++ W EL  + GL    WC+ GDFNV+R  SEK  G 
Sbjct: 906  FTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGS 965

Query: 941  RASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQ 1000
            R + S+K F+++I DC   D PL +  FTW+N +      R+DR L S  W  TF    Q
Sbjct: 966  RLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRFLYSNEWEQTFPQSIQ 1025

Query: 1001 SLGPRVTSDHWPLILTSGPQKWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPWKWEGYRF 1059
             + PR TSDHWP++L + P KWGP PFRFENMWL HPSFK +F  WW       WEG++F
Sbjct: 1026 GVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKF 1085

[Close]

BLAST of Spg028609 vs. TAIR 10
Match: AT2G43490.6 (Ypt/Rab-GAP domain of gyp1p superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0


Query: 11 VQVNRMLKPDKWQAAFDSDGKALGFQKALKSIILG 46
          +Q+ +MLKP+KWQA+FDSDG+  GFQKALK IILG
Sbjct: 40 IQIGKMLKPEKWQASFDSDGRVSGFQKALKLIILG 74

[Close]

BLAST of Spg028609 vs. TAIR 10
Match: AT2G43490.1 (Ypt/Rab-GAP domain of gyp1p superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 5.9e-08
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0


Query: 11 VQVNRMLKPDKWQAAFDSDGKALGFQKALKSIILG 46
          + + +MLKP+KWQA+FDSDG+  GFQKALK IILG
Sbjct: 44 ITIGKMLKPEKWQASFDSDGRVSGFQKALKLIILG 78

[Close]

BLAST of Spg028609 vs. TAIR 10
Match: AT2G43490.2 (Ypt/Rab-GAP domain of gyp1p superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 5.9e-08
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0


Query: 11 VQVNRMLKPDKWQAAFDSDGKALGFQKALKSIILG 46
          + + +MLKP+KWQA+FDSDG+  GFQKALK IILG
Sbjct: 44 ITIGKMLKPEKWQASFDSDGRVSGFQKALKLIILG 78

[Close]

BLAST of Spg028609 vs. TAIR 10
Match: AT2G43490.3 (Ypt/Rab-GAP domain of gyp1p superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 5.9e-08
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0


Query: 11 VQVNRMLKPDKWQAAFDSDGKALGFQKALKSIILG 46
          + + +MLKP+KWQA+FDSDG+  GFQKALK IILG
Sbjct: 44 ITIGKMLKPEKWQASFDSDGRVSGFQKALKLIILG 78

[Close]

BLAST of Spg028609 vs. TAIR 10
Match: AT2G43490.4 (Ypt/Rab-GAP domain of gyp1p superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 5.9e-08
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0


Query: 11 VQVNRMLKPDKWQAAFDSDGKALGFQKALKSIILG 46
          + + +MLKP+KWQA+FDSDG+  GFQKALK IILG
Sbjct: 44 ITIGKMLKPEKWQASFDSDGRVSGFQKALKLIILG 78

The following BLAST results are available for this feature:

BLAST of Spg028609 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_028075126.1	2.0e-66	49.79	uncharacterized protein LOC114277426 [Camellia sinensis]	[more]
RVW20303.1	3.6e-60	46.47	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVW20303.1	3.2e-24	31.58	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
BBH07150.1	2.4e-59	46.25	TatD related DNase [Prunus dulcis]	[more]
VVA20479.1	3.1e-59	46.25	Hypothetical predicted protein, partial [Prunus dulcis]	[more]

BLAST of Spg028609 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	7.0e-06	26.67	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Spg028609 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438CAL5	1.8e-60	46.47	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438CAL5	1.6e-24	31.58	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A4Y1RS61	1.1e-59	46.25	TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_019005 PE=4 SV=1	[more]
A5CAA2	1.5e-59	45.23	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A0A438GDE7	1.5e-59	45.23	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_...	[more]

Pages

BLAST of Spg028609 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43490.6	1.2e-08	71.43	Ypt/Rab-GAP domain of gyp1p superfamily protein	[more]
AT2G43490.1	5.9e-08	68.57	Ypt/Rab-GAP domain of gyp1p superfamily protein	[more]
AT2G43490.2	5.9e-08	68.57	Ypt/Rab-GAP domain of gyp1p superfamily protein	[more]
AT2G43490.3	5.9e-08	68.57	Ypt/Rab-GAP domain of gyp1p superfamily protein	[more]
AT2G43490.4	5.9e-08	68.57	Ypt/Rab-GAP domain of gyp1p superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 817..1013 e-value: 1.6E-22 score: 82.4
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 830..1013
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 1110..1197 e-value: 1.0E-15 score: 58.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 590..614
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 779..801
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 598..614
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 774..801
None	No IPR available	PANTHER	PTHR33710:SF32	SUBFAMILY NOT NAMED	coord: 876..1038
None	No IPR available	PANTHER	PTHR33710	BNAC02G09200D PROTEIN	coord: 876..1038

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028609.1	Spg028609.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050789	regulation of biological process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003824	catalytic activity