Spg028512 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028512
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	binding partner of ACD11 1-like
Location	scaffold7: 12451754 .. 12456869 (-)
RNA-Seq Expression	Spg028512
Synteny	Spg028512

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTCCAATCCTTCAATAATAATATCATAGCATTGTGGAGATGTGTGGATGGTTCTCTTGTCCATAACAAGTGGTATCAGAGTCATGCCCCTGACGTAGCCATGTCGGTGTGCCTCGATGACATAGTCATGGTTGATCCTTGGTTGAGCTAATTGGACAAGGGCGGTGCTCCAATGAAGATGAGTTGAGCCCTCGTTAAAAGTAATTGCTCGAGAGTAAACACAGATGGATGATTATTTGAGGGAAGGCTTTGATGGTCCTTCATCCGAGGGGTGGATTGTTGGGAATGCAACGAAAGTCCCACATTGACTAAGAAATGAGAAGGTTATGAATATATAAAGGATGGACAATATCTCCATTGGCATAAGGCCCTTTGAGCATAACCAAAGCAAAGTCATGAAGGCTTTTGTTCAAAGTGCACAATATCATACCATTATAGAGATATATATATGGGTGAGTGGTTCCATTGTACCTAACAAGTATAATGTCACACAAGCTTATAATTCGTCAATTTTTAATATTCACTAACCCAAGATTAGGGATTAAAATATATATTTAGCTATTTAGTCTTAAGACAAATAACTTTTAAGGAATGATTTGTGTTAGTAGTATTTAGGTGGTGAATGTGGGTTAAGTTTGAATTTATATAACTCATGTATTTAGATATCAAAGAAATGAGTGCTAACAAGAACATAGCTCAACTGGCGTAAGATCTAAATCTTGACTAAGAGGCCATAGATTCAAATCCTCCACCCCACAAGTTATGTAATATAATCGGTGGGAGCAACTATGGAGCATAGGATATGCAAAACATATAGGGAAAAGATAGAGTCTAAATTCTCATTAGACGTAATCATATCTTAAATGGTTAAATACTCGAGTTTCTCTTTATGGATCATGAGATCAAATTTCCTTTTCTATTTTTGTAAGGTAATGAATGTTGGCAAAGCTAGAAGCCTCACTTATTCCTAAACATCTTTTAAAAGTTGAGTAACCTTTAACATCTAGTAAGAAATTAAACATCAACATTGATCAAAATGTCAAACACAAATTTATGTAAATGTGAGTTAAAAATATAAAATAAAATAAAAAATAAAAAAAAAAAACCTTAAAATTTTATAAGCACTTGTAATATTTAAAAAATTCTTTTTATTTGCAAAAGAAAATGGAGATTGAAATGTTCAAATTTAGGATTAATACTCCAAACCCACCAAAGTTGAAGTGTCACTATTCTATGTAAGTTATAAATCGTTATTAATATTTATATTCATATTATCAATATTTTAAATAAATATCATTTATTTTCAAATAAATAAATAAATAAATAAATAAATATCATTCAATACAATGTTCTATGGAGAGAGAAAATACAATCTTTAGGGATGATAAACCTCCACTAGGTTTGAGTATAGTTTAAGTTATCAAATATTGATATTTCTTCTAACACGGTGTAGACTTCAAATCCTCTTTATCTCATTTTATAATTTATTACATAACATGATGTTGAATATAAAGATTAAAATATAAATTTAGTCATTGAACTTTGATGATTGTGTTTATGCAGTCTTTGAACATTAAAAAGTTTATAAGATCCTTAGTTGTTTAAAATAAATCATTACCATTAACTTCGATAGTTAACATTGTTGATGTGAGACATATATTACAATAATGAGTCAGTATCTAGCACAACATGACAACAAGGTAGATTAAATTAATAATACATGCTTGCAATTTAAGTACAAACGATTATTAAAAGTTCGAAATTTCACCCATATATATTGGTTGAACTAAAAAAAAACAAATACAAAATATAGACAAATGAGCTAATAGGGTGGCAAACAATAAAATTTTCTAGTTCACCCACTCGTATTTAATCCATTTAACACAACTCACTCTAATTTACCCTCTATTATCATATCTAGCTAGACAATCACCTCTACCACATCAATATCGAACCAAACATCAAACCATCTTTTTTAGTTCAACAAATACGAGAAAGAGGATCAAACTTTCTAACTTTAAAAAAGATAATAAGTATCTCATCTAATTGACTTAAACCAACTTAGACAATAACAATAACATATCAACAACAAAATTGAAAGTTTCTAAAGTTTACCGACTAAATAAATACAACCGTCAAAGTGAGCATAATTCAGCAGTAATTGACATGTACTCTCGACCAAAATGTCAAAGGTTCAAATCCTCCACCTTTGTTGAACTAAAAAAAAGACTAAATAAATACAACCATTACTTCAAAATCTAAATCTGTAAGACTCGAACATATCTCAAACATAAATCTTCAACCAAAAGATGAGACGTTTGAATTCTCGAACGAAAAACGAAGAAACAAGTAAAAGAAAAAACCTAATTTATATATATAATTAGGGTTTTAGATAAAAAGAAAATATATAATCCGGTGGCATCCAGTTATATACGAAACCAAGTCAAAAGTCAAAGCGTCCCGCTGGTTACTGAAAAACAAAATTGAAAAACTATGCAAAATCAAACCGTATCCATTTCCAGAACAACAGAAACAACAACACTTCCCCTTCCCTTCTCTCTTCTCTTCTCTTCCTCCATTGCCGCCGCTCGATCTCCTCATCTTCCGCCGTCGCCGATTGCCTCTCCAAGCTTTCCTCTGCCTTTCAGAAATGTCGGTGAGTTCATCATCTTCTTCTTCTTCTTCTTGTGTTTTATCTGTGAATCTTTGATGCAGATCTGCCGCGTTTGCGTTCGGTTATTTGTTTTCTCTTATGGTGAATGTCTGCTGTGTTGATTTGGGGATTTTTAATTGTAATGTGGAAATAGGGTTTTTGATTTTGATTTTGATTTTCAAGATCTCTGTTTCTCTATCCTCTGGTTTCTTCAATTTGCTCTGATTCTGTTTGGCTGCCGACAAAATTCCACTGTGCATTTTTCTCCCTGTGGGAATTTATCAAGAAACGGTTGAGATTCTCGTTCGTTTGGATGATTTATGAAACAAAACAGTATCTTAATCAATTCATTCTTCTCGAATCAGATGTAGACTTCTTTTTCCCTAAAATTTTAATTCCTCTGTGAAATGCTGAACTGATTGAAGTGAGAATTACGAATGGCTAAATCCCTGCTAAACCCAATTTTCTGTTCTTAATCTTCTTACTTCGATGAACTGAATGAAGTGACAATTACAACTAGTAAAATCAGTGCTGAATCCAAAATTTTATATTTGTTCTTAACATTTCCTTCATTTCATATGTGGATTTGGGCATTGATTTGATTCGTGAATTATTAATAATAATATCAATCGAGGAAGAAATGACATTGTAAAAGTTTGAATTCCGAGCTTTGTGCTACATTAAAAAGAAAATTCTAGGTTGATTGTCTAAGGCGTATTTAATCTTTTATTCATATTCTTAACACGAACACTTGCATTTCTTTATTCTATTTAATGTGTTTTCTTTTTAAAATCCCATGTAGATGAGAACTGTGAAGGTCAGCAACATCTCAAAGGCTACTTCTGAGAGAGACATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATGCAAAGGTTCGTGGTTATATTCTATCTGTTGATTTATTTGGAAAATTCATGCTGAAGAATTAGATTTTCTTTTTCTTTTTTTTGTGTAGAGAAACTGAAAATACTCAGGTTGCTTATGTTACATATAAGGATTCTCAAGGAGCAGATACTGCCATACTTTTGACAGTATGTTCCTTTATGCACATTGGACTTTTTATTGTTGTAATTATGTTTGTTTTTGTTAACTTTTTTCTCTTTTTTTCTCTCTCTCTCTCTATCTCTCAGGGAGCAAAAATTGGTGATCTATCTGTAACAATTACTCTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATCCTGGTAATTCTGCCTTGTTTACGAGTCTAGATCGTCTCGTGTATATGCATCGTTGTTGACCGTTGAATCTGTGCACAAAGATGAATTACATGTATTTGGTTTTGAAATTTTTTTGGTTTGAAATCTTTCATGCTGTCATCAGCTTCAGTTGTTTGAAAAGACTTTGAGTACCTTGAAGCAACTAAAATCAAGTAGTTGTCTTTGTCTTCGAAGGGGTATTTCAAAGTACTTACTGTTTCTTAAATCGAAATGACCTTTTGAAGGATAAGAGGCAAACTGTTTCCGGGATTGCTCCGAATCAGGCTGAAGATGTCGTAAGTACAATGCTTGCCAAGGGCTTCATCTTAGGGAAGGATGCCCTCAACAAGGCAAAAGCATTCGACGAACGACACCAGTTGACGTCGAATGCTTCTGCGACCGTCGCTTCCATTGACCGCAAGATGGGCATAACCGAGAAAATAACTGCAGGCACAGCAGTAGTAAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTTCTGAGAAGACGAAATCCGCCCTCGCAGTTGCCGAGCAGAAGGCAAGCAGTGCTGGAACCGCGCTCATGAGTAACTATTATGTGTTAACTGGAGCAGCATGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCTGAGGAAGTGACCCAGATGACCAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGCATATACCGTGAAAGAACCGGGATCATCAATAATTTCGCCGAGCTCCATCTCGACGAGCCTTTACCGGGAGAGCCTGCTATCGTTCCAGTTAATTCAGCCGATAGATAAGATAGTAAGTTGTGAATCATATGCATGAAAACCTACACTTGTGAATTACATTCCTTCCCCATCTTTGCTGTATGATATACACATTTCATCTAGAGGTGCTCCAATTACAGAGTTTACTTCTTTTATAAAGCTGTTCTTCTTGTGGATGTTGAAATGTTGTGACATTCTTTTGGGTAGAAAAAAGAAAATTACTTTTGAATACTTGATTTTGTATACTGTTTCATTCATCCATTGTAATTTGTAATTTAGATATATAGTCTCGTTTTTCTACAGCCAATTTTAGGTGAAATATGAATTGGCATATTAGGGAAACGTATATTCATTATTGACGAATATCATTTAATTTATTGTCTCTTTCATCTCATCTCTTGTTTAAATGAGAT

mRNA sequence

ATGGAATTCCAATCCTTCAATAATAATATCATAGCATTGTGGAGATGTGTGGATGGTTCTCTTGTCCATAACAAGTGGTATCAGAGTCATGCCCCTGACGTAGCCATGTCGAACAACAGAAACAACAACACTTCCCCTTCCCTTCTCTCTTCTCTTCTCTTCCTCCATTGCCGCCGCTCGATCTCCTCATCTTCCGCCGTCGCCGATTGCCTCTCCAAGCTTTCCTCTGCCTTTCAGAAATGTCGATCTGCCGCGTTTGCGTTCGGTTATTTGTTTTCTCTTATGATGAGAACTGTGAAGGTCAGCAACATCTCAAAGGCTACTTCTGAGAGAGACATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATGCAAAGAGAAACTGAAAATACTCAGGTTGCTTATGTTACATATAAGGATTCTCAAGGAGCAGATACTGCCATACTTTTGACAGGAGCAAAAATTGGTGATCTATCTGTAACAATTACTCTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATCCTGGATAAGAGGCAAACTGTTTCCGGGATTGCTCCGAATCAGGCTGAAGATGTCGTAAGTACAATGCTTGCCAAGGGCTTCATCTTAGGGAAGGATGCCCTCAACAAGGCAAAAGCATTCGACGAACGACACCAGTTGACGTCGAATGCTTCTGCGACCGTCGCTTCCATTGACCGCAAGATGGGCATAACCGAGAAAATAACTGCAGGCACAGCAGTAGTAAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTTCTGAGAAGACGAAATCCGCCCTCGCAGTTGCCGAGCAGAAGGCAAGCAGTGCTGGAACCGCGCTCATGAGTAACTATTATGTGTTAACTGGAGCAGCATGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCTGAGGAAGTGACCCAGATGACCAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGCATATACCGTGAAAGAACCGGGATCATCAATAATTTCGCCGAGCTCCATCTCGACGAGCCTTTACCGGGAGAGCCTGCTATCGTTCCAGTTAATTCAGCCGATAGATAA

Coding sequence (CDS)

ATGGAATTCCAATCCTTCAATAATAATATCATAGCATTGTGGAGATGTGTGGATGGTTCTCTTGTCCATAACAAGTGGTATCAGAGTCATGCCCCTGACGTAGCCATGTCGAACAACAGAAACAACAACACTTCCCCTTCCCTTCTCTCTTCTCTTCTCTTCCTCCATTGCCGCCGCTCGATCTCCTCATCTTCCGCCGTCGCCGATTGCCTCTCCAAGCTTTCCTCTGCCTTTCAGAAATGTCGATCTGCCGCGTTTGCGTTCGGTTATTTGTTTTCTCTTATGATGAGAACTGTGAAGGTCAGCAACATCTCAAAGGCTACTTCTGAGAGAGACATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATGCAAAGAGAAACTGAAAATACTCAGGTTGCTTATGTTACATATAAGGATTCTCAAGGAGCAGATACTGCCATACTTTTGACAGGAGCAAAAATTGGTGATCTATCTGTAACAATTACTCTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATCCTGGATAAGAGGCAAACTGTTTCCGGGATTGCTCCGAATCAGGCTGAAGATGTCGTAAGTACAATGCTTGCCAAGGGCTTCATCTTAGGGAAGGATGCCCTCAACAAGGCAAAAGCATTCGACGAACGACACCAGTTGACGTCGAATGCTTCTGCGACCGTCGCTTCCATTGACCGCAAGATGGGCATAACCGAGAAAATAACTGCAGGCACAGCAGTAGTAAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTTCTGAGAAGACGAAATCCGCCCTCGCAGTTGCCGAGCAGAAGGCAAGCAGTGCTGGAACCGCGCTCATGAGTAACTATTATGTGTTAACTGGAGCAGCATGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCTGAGGAAGTGACCCAGATGACCAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGCATATACCGTGAAAGAACCGGGATCATCAATAATTTCGCCGAGCTCCATCTCGACGAGCCTTTACCGGGAGAGCCTGCTATCGTTCCAGTTAATTCAGCCGATAGATAA

Protein sequence

MEFQSFNNNIIALWRCVDGSLVHNKWYQSHAPDVAMSNNRNNNTSPSLLSSLLFLHCRRSISSSSAVADCLSKLSSAFQKCRSAAFAFGYLFSLMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

Homology

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BLAST of Spg028512 vs. NCBI nr
Match: XP_038891484.1 (binding partner of ACD11 1 [Benincasa hispida])

HSP 1 Score: 500.4 bits (1287), Expect = 1.4e-137
Identity = 269/278 (96.76%), Postives = 273/278 (98.20%), Query Frame = 0


Query: 94  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 153
           + MRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKVTSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 154 LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 213
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDK+QTV GIAPNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKKQTVIGIAPNQAEDVVSTMLAKGFILGK 120

Query: 214 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 273
           DALNKAKAFDER QLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV+EKT
Sbjct: 121 DALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKT 180

Query: 274 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 333
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 334 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 372
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Spg028512 vs. NCBI nr
Match: KAG6599926.1 (Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 500.0 bits (1286), Expect = 1.8e-137
Identity = 268/278 (96.40%), Postives = 272/278 (97.84%), Query Frame = 0


Query: 94  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 153
           + MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MQMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 154 LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 213
           LTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G APNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGK 120

Query: 214 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 273
           DA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKT
Sbjct: 121 DAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVSEKT 180

Query: 274 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 333
           KSALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK
Sbjct: 181 KSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240

Query: 334 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 372
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Spg028512 vs. NCBI nr
Match: XP_022941588.1 (binding partner of ACD11 1-like isoform X3 [Cucurbita moschata] >KAG7030609.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499.6 bits (1285), Expect = 2.3e-137
Identity = 268/278 (96.40%), Postives = 272/278 (97.84%), Query Frame = 0


Query: 94  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 153
           + MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 154 LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 213
           LTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G APNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGK 120

Query: 214 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 273
           DA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKT
Sbjct: 121 DAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVSEKT 180

Query: 274 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 333
           KSALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK
Sbjct: 181 KSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240

Query: 334 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 372
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Spg028512 vs. NCBI nr
Match: XP_022941586.1 (binding partner of ACD11 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 498.8 bits (1283), Expect = 4.0e-137
Identity = 271/291 (93.13%), Postives = 277/291 (95.19%), Query Frame = 0


Query: 82  RSAAFAFGY-LFSLMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYV 141
           RS  F   + ++   MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYV
Sbjct: 37  RSICFLLEFGIYREKMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYV 96

Query: 142 TYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDV 201
           TYKDSQGADTAILLTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G APNQAEDV
Sbjct: 97  TYKDSQGADTAILLTGAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDV 156

Query: 202 VSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKV 261
           VSTMLAKGFILGKDA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKV
Sbjct: 157 VSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKV 216

Query: 262 REMDEMFQVSEKTKSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQ 321
           REMDE FQVSEKTKSALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQ
Sbjct: 217 REMDEKFQVSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQ 276

Query: 322 MTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 372
           MTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 277 MTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 327

[Close]

BLAST of Spg028512 vs. NCBI nr
Match: XP_004142266.1 (binding partner of ACD11 1 [Cucumis sativus] >KGN49610.1 hypothetical protein Csa_018454 [Cucumis sativus])

HSP 1 Score: 498.0 bits (1281), Expect = 6.8e-137
Identity = 268/278 (96.40%), Postives = 273/278 (98.20%), Query Frame = 0


Query: 94  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 153
           + MRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAIL 60

Query: 154 LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 213
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTV+GIAPNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGK 120

Query: 214 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 273
           DALNKAKAFDER QLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKT
Sbjct: 121 DALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKT 180

Query: 274 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 333
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 334 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 372
           KESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Spg028512 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.1e-57
Identity = 130/260 (50.00%), Postives = 181/260 (69.62%), Query Frame = 0


Query: 96  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLT 155
           +R+VKV N+S   +E DIKEFFSFSGE+  +++Q    N   AYVT+K++QGA+TA+LL+
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQ---SNEHSAYVTFKETQGAETAVLLS 64

Query: 156 GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDA 215
           GA I D SV I L  NY  PP A  +  + + + +     +AEDVVS+MLAKGFILGKDA
Sbjct: 65  GASIADQSVIIELAPNYS-PPAAPHA--ETQSSGAESVVQKAEDVVSSMLAKGFILGKDA 124

Query: 216 LNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKS 275
           + KAKAFDE+H  TS A+A VAS+D+K+G+++K+TAGT++VNEK++ +D+ FQV+E+TKS
Sbjct: 125 VGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKS 184

Query: 276 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKE 335
             A AEQ  SSAG+A+M N YVLTG +W + A   V +AA EV Q TK   EK E E+  
Sbjct: 185 VYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTK---EKVEAEQPS 244

Query: 336 SIYRERTGIINNFAELHLDE 356
              + +  +   ++ +H  E
Sbjct: 245 QPAQSQQQLPEGYSPIHSSE 255

[Close]

BLAST of Spg028512 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.1e-07
Identity = 57/211 (27.01%), Postives = 97/211 (45.97%), Query Frame = 0


Query: 95  MMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILL 154
           M   V V+NIS   +E+ I +FFSF G++  +  ++  E TQ A + ++      TA+LL
Sbjct: 1   MSNQVIVTNISPEVTEKQISDFFSFCGKVSNISTEKSGE-TQTAKIQFERPSATKTALLL 60

Query: 155 TGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAED----VVSTMLAKGFI 214
             A +G   + IT  +         +S  D+       A  Q +     ++S +L++G+ 
Sbjct: 61  QDALLGQNKIQITSEDG------GAASTTDQGGAGGDQAARQEDKPRSAIISELLSRGYH 120

Query: 215 LGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMD 274
           L    L K+   D+ + ++S          +  GI E   +G   VN      EK  E+D
Sbjct: 121 LSDVTLEKSIQLDQSYGVSS----------KFKGILESALSGVRSVNERYHVTEKANEVD 180

Query: 275 EMFQVSEK---TKSALAVAEQKA--SSAGTA 291
             F +S+K   T S ++    KA  ++AGT+
Sbjct: 181 NKFAISDKLNRTSSLVSTYFHKALETAAGTS 194

[Close]

BLAST of Spg028512 vs. ExPASy TrEMBL
Match: A0A6J1FSI4 (binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111446898 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 1.1e-137
Identity = 268/278 (96.40%), Postives = 272/278 (97.84%), Query Frame = 0


Query: 94  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 153
           + MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 154 LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 213
           LTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G APNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGK 120

Query: 214 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 273
           DA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKT
Sbjct: 121 DAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKVREMDEKFQVSEKT 180

Query: 274 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 333
           KSALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK
Sbjct: 181 KSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240

Query: 334 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 372
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Spg028512 vs. ExPASy TrEMBL
Match: A0A6J1FLI4 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446898 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.9e-137
Identity = 271/291 (93.13%), Postives = 277/291 (95.19%), Query Frame = 0


Query: 82  RSAAFAFGY-LFSLMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYV 141
           RS  F   + ++   MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYV
Sbjct: 37  RSICFLLEFGIYREKMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYV 96

Query: 142 TYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDV 201
           TYKDSQGADTAILLTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G APNQAEDV
Sbjct: 97  TYKDSQGADTAILLTGAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDV 156

Query: 202 VSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKV 261
           VSTMLAKGFILGKDA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKV
Sbjct: 157 VSTMLAKGFILGKDAVNKAKAFDERHQLTSNASATVTSIDRKMGITEKITAGTAVVNEKV 216

Query: 262 REMDEMFQVSEKTKSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQ 321
           REMDE FQVSEKTKSALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQ
Sbjct: 217 REMDEKFQVSEKTKSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQ 276

Query: 322 MTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 372
           MTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 277 MTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 327

[Close]

BLAST of Spg028512 vs. ExPASy TrEMBL
Match: A0A0A0KIR7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G023900 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 3.3e-137
Identity = 268/278 (96.40%), Postives = 273/278 (98.20%), Query Frame = 0


Query: 94  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 153
           + MRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAIL 60

Query: 154 LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 213
           LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTV+GIAPNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGK 120

Query: 214 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 273
           DALNKAKAFDER QLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKT
Sbjct: 121 DALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVREKT 180

Query: 274 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 333
           KSALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK
Sbjct: 181 KSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEK 240

Query: 334 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 372
           KESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Spg028512 vs. ExPASy TrEMBL
Match: A0A5A7UTK1 (Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00920 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 5.6e-137
Identity = 267/276 (96.74%), Postives = 272/276 (98.55%), Query Frame = 0


Query: 96  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLT 155
           MRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAILLT
Sbjct: 1   MRTVKVSNISKLTSERDIKEFFSFSGEILYVEMQRESENTQVAYVTYKDSQGADTAILLT 60

Query: 156 GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDA 215
           GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTV+GIAPNQAEDVVSTMLAKGFILGKDA
Sbjct: 61  GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFILGKDA 120

Query: 216 LNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKS 275
           LNKAKAFDER Q TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV+EKTKS
Sbjct: 121 LNKAKAFDERLQFTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKS 180

Query: 276 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKE 335
           ALAVAEQKA+SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEKKE
Sbjct: 181 ALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKE 240

Query: 336 SIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 372
           SIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 SIYRERTGIISNFAELHLDEPLPGEPAIVPVNSADR 276

[Close]

BLAST of Spg028512 vs. ExPASy TrEMBL
Match: A0A6J1K671 (binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491510 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 5.6e-137
Identity = 267/278 (96.04%), Postives = 271/278 (97.48%), Query Frame = 0


Query: 94  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 153
           + MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL
Sbjct: 1   MSMRTVKVSNISKATSERDIEEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 60

Query: 154 LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGK 213
           LTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G APNQAEDVVSTMLAKGFILGK
Sbjct: 61  LTGAKIGDLSVTIALVENYHLPPEAMSSILDKRQTVTGNAPNQAEDVVSTMLAKGFILGK 120

Query: 214 DALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKT 273
           DA+NKAKAFDERHQLTSNASATV SIDRKMGI EKITAGTAVVNEKVREMDE FQVSEKT
Sbjct: 121 DAVNKAKAFDERHQLTSNASATVTSIDRKMGIMEKITAGTAVVNEKVREMDEKFQVSEKT 180

Query: 274 KSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 333
           KSALAVAEQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK
Sbjct: 181 KSALAVAEQKASSAGTALMSNYYVFTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEK 240

Query: 334 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 372
           KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Sbjct: 241 KESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR 278

[Close]

BLAST of Spg028512 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 272.3 bits (695), Expect = 5.7e-73
Identity = 153/266 (57.52%), Postives = 194/266 (72.93%), Query Frame = 0


Query: 94  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 153
           + M TVKVSN+S   ++RD+KEFFSFSG+ILY+E Q ETE T++AYVT+KD QGA+TA+L
Sbjct: 1   MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60

Query: 154 LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPN----QAEDVVSTMLAKGF 213
           L+GA I D SV +++  +Y L PEA++S+  K    S  A +    +AEDVVS+MLAKGF
Sbjct: 61  LSGATIVDSSVIVSMAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAKGF 120

Query: 214 ILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV 273
           ILGKDA+ KAK+ DE+HQLTS ASA VAS D+K+G T+KI  GT VV EKVRE+D+ +QV
Sbjct: 121 ILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREVDQKYQV 180

Query: 274 SEKTKSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKA 333
           SEKTKSA+A AEQ  S+AG+A+M N YVLTGA W + A   V KAAEEV Q  K KV  A
Sbjct: 181 SEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAKEKVGMA 240

Query: 334 EEEKKESIYRERTGIINNFAELHLDE 356
           EEE K         +++ FA +HL E
Sbjct: 241 EEEDKRK-------VVDEFARVHLSE 259

[Close]

BLAST of Spg028512 vs. TAIR 10
Match: AT1G67950.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 266.9 bits (681), Expect = 2.4e-71
Identity = 152/271 (56.09%), Postives = 196/271 (72.32%), Query Frame = 0


Query: 96  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLT 155
           ++TVK+SN+S   S++D+KEFFSFSG+I YVEM+ ET+ +QVAYVT+KDSQGA+TA+LLT
Sbjct: 28  VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLT 87

Query: 156 GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDA 215
           GA I DL V+IT   NY LPPEA++  LD   + +G +  +AEDVV+ M+ +G+ LGKDA
Sbjct: 88  GAVIADLRVSITPAVNYQLPPEALA--LDSEHSFNGFSVKKAEDVVNIMVGRGYALGKDA 147

Query: 216 LNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKS 275
           + KAKAFD+RH L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKS
Sbjct: 148 MEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITKS 207

Query: 276 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKE 335
           ALA AE+ A SA TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E +KE
Sbjct: 208 ALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKAVKE-------KVENGGEGRKE 267

Query: 336 SIYRERTGIINNFAELHLDEPLPGEPAIVPV 367
            I               LD   P  PA+VPV
Sbjct: 268 II--------------TLDPSSPKVPAVVPV 275

[Close]

BLAST of Spg028512 vs. TAIR 10
Match: AT1G67950.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 266.9 bits (681), Expect = 2.4e-71
Identity = 152/271 (56.09%), Postives = 196/271 (72.32%), Query Frame = 0


Query: 96  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLT 155
           ++TVK+SN+S   S++D+KEFFSFSG+I YVEM+ ET+ +QVAYVT+KDSQGA+TA+LLT
Sbjct: 29  VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLT 88

Query: 156 GAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDA 215
           GA I DL V+IT   NY LPPEA++  LD   + +G +  +AEDVV+ M+ +G+ LGKDA
Sbjct: 89  GAVIADLRVSITPAVNYQLPPEALA--LDSEHSFNGFSVKKAEDVVNIMVGRGYALGKDA 148

Query: 216 LNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKS 275
           + KAKAFD+RH L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKS
Sbjct: 149 MEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITKS 208

Query: 276 ALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKE 335
           ALA AE+ A SA TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E +KE
Sbjct: 209 ALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKAVKE-------KVENGGEGRKE 268

Query: 336 SIYRERTGIINNFAELHLDEPLPGEPAIVPV 367
            I               LD   P  PA+VPV
Sbjct: 269 II--------------TLDPSSPKVPAVVPV 276

[Close]

BLAST of Spg028512 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 263.8 bits (673), Expect = 2.0e-70
Identity = 145/270 (53.70%), Postives = 197/270 (72.96%), Query Frame = 0


Query: 94  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAIL 153
           + M TVKVSN+S   +ERD+KEFFSFSG+I Y+E Q E + +++AYVT+KD QGA+TA+L
Sbjct: 1   MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60

Query: 154 LTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAP--------NQAEDVVSTML 213
           LTG+ I D SVT+T+  +Y LPP+A++SI   +++    +P         +AEDVVS M+
Sbjct: 61  LTGSTIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSGMI 120

Query: 214 AKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDE 273
           +KGF+LGKDA+ KAK+ DE+HQLTS ASA V S D+++G TEKI  GT VV+EKV+E+D+
Sbjct: 121 SKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEVDQ 180

Query: 274 MFQVSEKTKSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAK 333
            FQV+EKTKSA+A AEQ  S+AG+A+M N YVLTGA W + A   V+KAAEEV Q  K K
Sbjct: 181 KFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAKEK 240

Query: 334 VEKAEEEKKESIYRERTGIINNFAELHLDE 356
           V  AEEE++     E+  +++  A +HL E
Sbjct: 241 VGLAEEEEE-----EKKKVVDEVAIVHLTE 265

[Close]

BLAST of Spg028512 vs. TAIR 10
Match: AT1G67950.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 263.5 bits (672), Expect = 2.6e-70
Identity = 152/272 (55.88%), Postives = 198/272 (72.79%), Query Frame = 0


Query: 96  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLT 155
           ++TVK+SN+S   S++D+KEFFSFSG+I YVEM+ ET+ +QVAYVT+KDSQGA+TA+LLT
Sbjct: 28  VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLT 87

Query: 156 GAKIGDLSVTITLVENYHLPPEAMSSILDKRQ-TVSGIAPNQAEDVVSTMLAKGFILGKD 215
           GA I DL V+IT   NY LPPEA++  LD ++ + +G +  +AEDVV+ M+ +G+ LGKD
Sbjct: 88  GAVIADLRVSITPAVNYQLPPEALA--LDSQEHSFNGFSVKKAEDVVNIMVGRGYALGKD 147

Query: 216 ALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTK 275
           A+ KAKAFD+RH L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TK
Sbjct: 148 AMEKAKAFDDRHNLISNASATIASLDDKMGLSEKLSIGTTVVNEKLRDIDERYQVREITK 207

Query: 276 SALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKK 335
           SALA AE+ A SA TALM+N YV +GA+WFSNA  AVTKA +E       KVE   E +K
Sbjct: 208 SALAAAEETAISARTALMANPYVSSGASWFSNAFGAVTKAVKE-------KVENGGEGRK 267

Query: 336 ESIYRERTGIINNFAELHLDEPLPGEPAIVPV 367
           E I               LD   P  PA+VPV
Sbjct: 268 EII--------------TLDPSSPKVPAVVPV 276

The following BLAST results are available for this feature:

BLAST of Spg028512 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891484.1	1.4e-137	96.76	binding partner of ACD11 1 [Benincasa hispida]	[more]
KAG6599926.1	1.8e-137	96.40	Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022941588.1	2.3e-137	96.40	binding partner of ACD11 1-like isoform X3 [Cucurbita moschata] >KAG7030609.1 Bi...	[more]
XP_022941586.1	4.0e-137	93.13	binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]	[more]
XP_004142266.1	6.8e-137	96.40	binding partner of ACD11 1 [Cucumis sativus] >KGN49610.1 hypothetical protein Cs...	[more]

BLAST of Spg028512 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	1.1e-57	50.00	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	3.1e-07	27.01	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of Spg028512 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSI4	1.1e-137	96.40	binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1FLI4	1.9e-137	93.13	binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0KIR7	3.3e-137	96.40	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G023900 PE=4 SV...	[more]
A0A5A7UTK1	5.6e-137	96.74	Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1K671	5.6e-137	96.04	binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Spg028512 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17720.1	5.7e-73	57.52	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.1	2.4e-71	56.09	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.2	2.4e-71	56.09	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	2.0e-70	53.70	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G67950.3	2.6e-70	55.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 312..332
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 96..370
None	No IPR available	PANTHER	PTHR32343:SF29	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 96..370
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 98..167 e-value: 4.3E-9 score: 46.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 100..161 e-value: 5.1E-8 score: 32.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 97..171 score: 11.622288
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 95..167 e-value: 5.3E-12 score: 47.5
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 97..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028512.1	Spg028512.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding