Spg028508 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028508
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Two-component response regulator
Location	scaffold7: 11632265 .. 11633213 (+)
RNA-Seq Expression	Spg028508
Synteny	Spg028508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCTTTCCATGGAGTCTGGCTCTTCTTCTTCAATGAAATGGGGTTCTGAAAATGGCTATCAACCCCATGTTCTTGCTGTTGATGATAATATTGTCGATCGTAAACTCGTAGAGAAGTTGCTCAAAAACTCCTCTTGTAAAGGTATCTTCTTTATTAACTTTTATTTTAGGTCACATTTGGATTTGGTTTTTTTTTTAGTTTGTGAAAATTAAGCCGATAAACACATTTGCTTTGATTCTAAAAACTAAGAATTCAAATGTGTGCATAAAGGTGAAAAGTAACGAAATTTGGAGAAAAGAATATAATTTTCAAACACCAACCTTAGTTTTCCAACTTTGAATATTCAAATTTGAACTTTCCAAACAAAGGTTTAATTTTAAAAAAACAATCTTGATAAAGATTCAAAACTCTAATCTTTTAGTCGAGTCTATAATAGAGACTTAAATGATTTTGCACATGAGATTATTGTTTCTTTCTGTGTTAAATTGAAATGGGTTTCTGTTTGGCAGCCCAGAAAATTCTCTGGTGTGCTGAAAACAAAGTTTGAGAATCTGGGAAAGGAATATAATAATCTCAAAAAAAATCCTTTTTTTTATTTTTTTTCAAAATTAAATTTTGTGCAGTAACGACAGCAGAAAATGGTCGCAGTGCTTTGGAGTTCTTGGGTTTGTTGGATGATCATCAACACAACAACTTTGAATGCACCAATGTAAGTCAACCCAAAATAAAATTAAAAACAAAAAAACAAAAAAATCCTGTTTGTTTAGTGAGAAAATGAGGAAAATTCCCCAGAAAAATTTGATGTTTTAATGGAAAAACATTTATGTTTTGTGTTTGCAGAGGTCGAAGGTGAACATGATTATCACAGATTATTGCATGCCAGGAATGTCCGGATACGAACTTCTCAAGAAAATCAAGGTTTTCTATTTTTATTTTATTCAAAATTAA

mRNA sequence

GTCCTTTCCATGGAGTCTGGCTCTTCTTCTTCAATGAAATGGGGTTCTGAAAATGGCTATCAACCCCATGTTCTTGCTGTTGATGATAATATTGTCGATCGTAAACTCGTAGAGAAGTTGCTCAAAAACTCCTCTTGTAAAGTAACGACAGCAGAAAATGGTCGCAGTGCTTTGGAGTTCTTGGGTTTGTTGGATGATCATCAACACAACAACTTTGAATGCACCAATAGGTCGAAGGTGAACATGATTATCACAGATTATTGCATGCCAGGAATGTCCGGATACGAACTTCTCAAGAAAATCAAGGTTTTCTATTTTTATTTTATTCAAAATTAA

Coding sequence (CDS)

GTCCTTTCCATGGAGTCTGGCTCTTCTTCTTCAATGAAATGGGGTTCTGAAAATGGCTATCAACCCCATGTTCTTGCTGTTGATGATAATATTGTCGATCGTAAACTCGTAGAGAAGTTGCTCAAAAACTCCTCTTGTAAAGTAACGACAGCAGAAAATGGTCGCAGTGCTTTGGAGTTCTTGGGTTTGTTGGATGATCATCAACACAACAACTTTGAATGCACCAATAGGTCGAAGGTGAACATGATTATCACAGATTATTGCATGCCAGGAATGTCCGGATACGAACTTCTCAAGAAAATCAAGGTTTTCTATTTTTATTTTATTCAAAATTAA

Protein sequence

VLSMESGSSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDHQHNNFECTNRSKVNMIITDYCMPGMSGYELLKKIKVFYFYFIQN

Homology

[Close]

BLAST of Spg028508 vs. NCBI nr
Match: XP_008466997.2 (PREDICTED: two-component response regulator ARR16-like, partial [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 1.0e-40
Identity = 91/107 (85.05%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 3   SMESGSSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLG 62
           S  S SSS MKW  ENGYQPHVLAVDDN+VDRKLVEKLLKNSSCKVTTAENG SALEFLG
Sbjct: 8   SSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGASALEFLG 67

Query: 63  LLDDH-QHNNF-ECTN-RSKVNMIITDYCMPGMSGYELLKKIKVFYF 107
           LLD+H QH NF EC+N RSKVNMIITDYCMPGMSGYELLKKIKV +F
Sbjct: 68  LLDEHNQHTNFEECSNQRSKVNMIITDYCMPGMSGYELLKKIKVLFF 114

[Close]

BLAST of Spg028508 vs. NCBI nr
Match: XP_038893219.1 (two-component response regulator ARR17-like [Benincasa hispida])

HSP 1 Score: 172.6 bits (436), Expect = 2.0e-39
Identity = 83/96 (86.46%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 8   SSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDH 67
           +SSS+KW SENG+QPHVLAVDDN+VDRKLVEKLLKNSSCKVTTAENG SALEFLGLLD+H
Sbjct: 3   ASSSLKWSSENGFQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGLSALEFLGLLDEH 62

Query: 68  -QHNNFECTNRSKVNMIITDYCMPGMSGYELLKKIK 103
            QH+N E +NRSKVNMIITDYCMPGM+GYELLKKIK
Sbjct: 63  NQHSNLESSNRSKVNMIITDYCMPGMTGYELLKKIK 98

[Close]

BLAST of Spg028508 vs. NCBI nr
Match: XP_031741127.1 (two-component response regulator ARR17 isoform X2 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 5.7e-39
Identity = 88/104 (84.62%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 3   SMESGSSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLG 62
           S  S SSS MKW  ENGYQPHVLAVDDN+VDRKLVEKLLKNSSCKVTTAENG SALEFLG
Sbjct: 6   SSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLG 65

Query: 63  LLDDH-QHNNFECTN---RSKVNMIITDYCMPGMSGYELLKKIK 103
           LLD+H QH NFE +N   RSKVNMIITDYCMPGMSGYELLKKIK
Sbjct: 66  LLDEHNQHTNFERSNWQQRSKVNMIITDYCMPGMSGYELLKKIK 109

[Close]

BLAST of Spg028508 vs. NCBI nr
Match: XP_022146831.1 (two-component response regulator ARR17 [Momordica charantia])

HSP 1 Score: 170.6 bits (431), Expect = 7.5e-39
Identity = 81/95 (85.26%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 8   SSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDH 67
           +SSS+ W SE G+QPHVLAVDDN+VDRKLVEKLLKNS+CKVTTAENGRSALEFLGLLDDH
Sbjct: 3   ASSSLDWDSEIGFQPHVLAVDDNLVDRKLVEKLLKNSACKVTTAENGRSALEFLGLLDDH 62

Query: 68  QHNNFECTNRSKVNMIITDYCMPGMSGYELLKKIK 103
           QH+N E  +RSKVNMIITDYCMPGMSGYELLK+IK
Sbjct: 63  QHSNLERRSRSKVNMIITDYCMPGMSGYELLKRIK 97

[Close]

BLAST of Spg028508 vs. NCBI nr
Match: XP_004146434.1 (two-component response regulator ARR17 isoform X1 [Cucumis sativus] >KGN50743.1 hypothetical protein Csa_005849 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 7.5e-39
Identity = 88/105 (83.81%), Postives = 91/105 (86.67%), Query Frame = 0


Query: 3   SMESGSSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLG 62
           S  S SSS MKW  ENGYQPHVLAVDDN+VDRKLVEKLLKNSSCKVTTAENG SALEFLG
Sbjct: 6   SSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLG 65

Query: 63  LLDDH-QHNNFECTN----RSKVNMIITDYCMPGMSGYELLKKIK 103
           LLD+H QH NFE +N    RSKVNMIITDYCMPGMSGYELLKKIK
Sbjct: 66  LLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIK 110

[Close]

BLAST of Spg028508 vs. ExPASy Swiss-Prot
Match: Q9FPR6 (Two-component response regulator ARR17 OS=Arabidopsis thaliana OX=3702 GN=ARR17 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-25
Identity = 62/97 (63.92%), Postives = 75/97 (77.32%), Query Frame = 0


Query: 6   SGSSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLD 65
           SGS S +    E   + HVLAVDDN++DRKLVE++LK SSCKVTTAENG  ALE+LGL D
Sbjct: 7   SGSDSCLSSMEE---ELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGD 66

Query: 66  DHQHNNFECTNRSKVNMIITDYCMPGMSGYELLKKIK 103
             Q ++   TN  KVN+IITDYCMPGM+G+ELLKK+K
Sbjct: 67  PQQTDSL--TNVMKVNLIITDYCMPGMTGFELLKKVK 98

[Close]

BLAST of Spg028508 vs. ExPASy Swiss-Prot
Match: Q9SHC2 (Two-component response regulator ARR16 OS=Arabidopsis thaliana OX=3702 GN=ARR16 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.9e-25
Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 23  HVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDHQHNNFECTNRSKVNM 82
           HVLAVDDN++DRKLVE+LLK S CKVTTAEN   ALE+LGL D +QH +    N  KV++
Sbjct: 30  HVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVSL 89

Query: 83  IITDYCMPGMSGYELLKKIK 103
           IITDYCMPGM+G+ELLKK+K
Sbjct: 90  IITDYCMPGMTGFELLKKVK 109

[Close]

BLAST of Spg028508 vs. ExPASy Swiss-Prot
Match: Q9ZWS9 (Two-component response regulator ARR3 OS=Arabidopsis thaliana OX=3702 GN=ARR3 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 52/82 (63.41%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 21  QPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDHQHNNFECTNRSKV 80
           Q HVLAVDD++VDR ++E+LL+ +SCKVT  ++G  ALEFLGL DD     F+   R KV
Sbjct: 32  QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFD---RLKV 91

Query: 81  NMIITDYCMPGMSGYELLKKIK 103
           ++IITDYCMPGM+GYELLKKIK
Sbjct: 92  DLIITDYCMPGMTGYELLKKIK 110

[Close]

BLAST of Spg028508 vs. ExPASy Swiss-Prot
Match: O80365 (Two-component response regulator ARR8 OS=Arabidopsis thaliana OX=3702 GN=ARR8 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.3e-21
Identity = 48/85 (56.47%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 23  HVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGL-LDDHQHNNFECT----NR 82
           HVLAVDD++ DRK++E+LL+ SSC+VTT ++G  ALEFLGL +DD+  N    +      
Sbjct: 10  HVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQE 69

Query: 83  SKVNMIITDYCMPGMSGYELLKKIK 103
            ++N+IITDYCMPGM+GY+LLKK+K
Sbjct: 70  VEINLIITDYCMPGMTGYDLLKKVK 94

[Close]

BLAST of Spg028508 vs. ExPASy Swiss-Prot
Match: O80366 (Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.6e-21
Identity = 49/89 (55.06%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 21  QPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDHQHNNFECTNRS-- 80
           Q HVLAVDD++ DRKL+E+LL+ SSC+VTT ++G  ALEFLGL      N+    +++  
Sbjct: 8   QFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPV 67

Query: 81  -----KVNMIITDYCMPGMSGYELLKKIK 103
                +VN+IITDYCMPGM+GY+LLKK+K
Sbjct: 68  NHQVVEVNLIITDYCMPGMTGYDLLKKVK 96

[Close]

BLAST of Spg028508 vs. ExPASy TrEMBL
Match: A0A1S3CSH6 (two-component response regulator ARR16-like OS=Cucumis melo OX=3656 GN=LOC103504401 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.0e-41
Identity = 91/107 (85.05%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 3   SMESGSSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLG 62
           S  S SSS MKW  ENGYQPHVLAVDDN+VDRKLVEKLLKNSSCKVTTAENG SALEFLG
Sbjct: 8   SSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGASALEFLG 67

Query: 63  LLDDH-QHNNF-ECTN-RSKVNMIITDYCMPGMSGYELLKKIKVFYF 107
           LLD+H QH NF EC+N RSKVNMIITDYCMPGMSGYELLKKIKV +F
Sbjct: 68  LLDEHNQHTNFEECSNQRSKVNMIITDYCMPGMSGYELLKKIKVLFF 114

[Close]

BLAST of Spg028508 vs. ExPASy TrEMBL
Match: A0A0A0KMB0 (Response regulatory domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G223020 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.6e-39
Identity = 88/105 (83.81%), Postives = 91/105 (86.67%), Query Frame = 0


Query: 3   SMESGSSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLG 62
           S  S SSS MKW  ENGYQPHVLAVDDN+VDRKLVEKLLKNSSCKVTTAENG SALEFLG
Sbjct: 6   SSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLG 65

Query: 63  LLDDH-QHNNFECTN----RSKVNMIITDYCMPGMSGYELLKKIK 103
           LLD+H QH NFE +N    RSKVNMIITDYCMPGMSGYELLKKIK
Sbjct: 66  LLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIK 110

[Close]

BLAST of Spg028508 vs. ExPASy TrEMBL
Match: A0A6J1D0J7 (two-component response regulator ARR17 OS=Momordica charantia OX=3673 GN=LOC111015940 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.6e-39
Identity = 81/95 (85.26%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 8   SSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDH 67
           +SSS+ W SE G+QPHVLAVDDN+VDRKLVEKLLKNS+CKVTTAENGRSALEFLGLLDDH
Sbjct: 3   ASSSLDWDSEIGFQPHVLAVDDNLVDRKLVEKLLKNSACKVTTAENGRSALEFLGLLDDH 62

Query: 68  QHNNFECTNRSKVNMIITDYCMPGMSGYELLKKIK 103
           QH+N E  +RSKVNMIITDYCMPGMSGYELLK+IK
Sbjct: 63  QHSNLERRSRSKVNMIITDYCMPGMSGYELLKRIK 97

[Close]

BLAST of Spg028508 vs. ExPASy TrEMBL
Match: A0A6J1KBR6 (two-component response regulator ARR17-like OS=Cucurbita maxima OX=3661 GN=LOC111491863 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.0e-37
Identity = 84/101 (83.17%), Postives = 89/101 (88.12%), Query Frame = 0


Query: 4   MESGSSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGL 63
           ME+  SSS    S+NGYQPHVLAVDDN+VDRKLVEKLLKNSS KVTTAENGRSALEFLGL
Sbjct: 1   MEAAGSSS----SQNGYQPHVLAVDDNLVDRKLVEKLLKNSSFKVTTAENGRSALEFLGL 60

Query: 64  LD--DHQHNNFECTNRSKVNMIITDYCMPGMSGYELLKKIK 103
           LD  +H+HNN EC  RSKVNMIITDYCMPGMSGYELLKKIK
Sbjct: 61  LDEHEHEHNNIECVGRSKVNMIITDYCMPGMSGYELLKKIK 97

[Close]

BLAST of Spg028508 vs. ExPASy TrEMBL
Match: A0A6J1FUE0 (two-component response regulator ARR17-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447367 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.3e-36
Identity = 82/101 (81.19%), Postives = 88/101 (87.13%), Query Frame = 0


Query: 4   MESGSSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGL 63
           ME+  SSS    S+NGYQPHVLAVDDN+VDRKLVEKLLKNSS KVTTAENG SALEFLGL
Sbjct: 1   MEAAGSSS----SQNGYQPHVLAVDDNLVDRKLVEKLLKNSSFKVTTAENGLSALEFLGL 60

Query: 64  LD--DHQHNNFECTNRSKVNMIITDYCMPGMSGYELLKKIK 103
            D  +H+HNN EC +RSKVNMIITDYCMPGMSGYELLKKIK
Sbjct: 61  SDEHEHEHNNIECGDRSKVNMIITDYCMPGMSGYELLKKIK 97

[Close]

BLAST of Spg028508 vs. TAIR 10
Match: AT3G56380.1 (response regulator 17 )

HSP 1 Score: 117.1 bits (292), Expect = 9.1e-27
Identity = 62/97 (63.92%), Postives = 75/97 (77.32%), Query Frame = 0


Query: 6   SGSSSSMKWGSENGYQPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLD 65
           SGS S +    E   + HVLAVDDN++DRKLVE++LK SSCKVTTAENG  ALE+LGL D
Sbjct: 7   SGSDSCLSSMEE---ELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGD 66

Query: 66  DHQHNNFECTNRSKVNMIITDYCMPGMSGYELLKKIK 103
             Q ++   TN  KVN+IITDYCMPGM+G+ELLKK+K
Sbjct: 67  PQQTDSL--TNVMKVNLIITDYCMPGMTGFELLKKVK 98

[Close]

BLAST of Spg028508 vs. TAIR 10
Match: AT2G40670.1 (response regulator 16 )

HSP 1 Score: 115.2 bits (287), Expect = 3.5e-26
Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 23  HVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDHQHNNFECTNRSKVNM 82
           HVLAVDDN++DRKLVE+LLK S CKVTTAEN   ALE+LGL D +QH +    N  KV++
Sbjct: 30  HVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVSL 89

Query: 83  IITDYCMPGMSGYELLKKIK 103
           IITDYCMPGM+G+ELLKK+K
Sbjct: 90  IITDYCMPGMTGFELLKKVK 109

[Close]

BLAST of Spg028508 vs. TAIR 10
Match: AT2G40670.2 (response regulator 16 )

HSP 1 Score: 115.2 bits (287), Expect = 3.5e-26
Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 23  HVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDHQHNNFECTNRSKVNM 82
           HVLAVDDN++DRKLVE+LLK S CKVTTAEN   ALE+LGL D +QH +    N  KV++
Sbjct: 30  HVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVSL 89

Query: 83  IITDYCMPGMSGYELLKKIK 103
           IITDYCMPGM+G+ELLKK+K
Sbjct: 90  IITDYCMPGMTGFELLKKVK 109

[Close]

BLAST of Spg028508 vs. TAIR 10
Match: AT1G59940.1 (response regulator 3 )

HSP 1 Score: 104.0 bits (258), Expect = 8.0e-23
Identity = 52/82 (63.41%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 21  QPHVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDHQHNNFECTNRSKV 80
           Q HVLAVDD++VDR ++E+LL+ +SCKVT  ++G  ALEFLGL DD     F+   R KV
Sbjct: 32  QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFD---RLKV 91

Query: 81  NMIITDYCMPGMSGYELLKKIK 103
           ++IITDYCMPGM+GYELLKKIK
Sbjct: 92  DLIITDYCMPGMTGYELLKKIK 110

[Close]

BLAST of Spg028508 vs. TAIR 10
Match: AT2G41310.1 (response regulator 3 )

HSP 1 Score: 102.1 bits (253), Expect = 3.0e-22
Identity = 48/85 (56.47%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 23  HVLAVDDNIVDRKLVEKLLKNSSCKVTTAENGRSALEFLGL-LDDHQHNNFECT----NR 82
           HVLAVDD++ DRK++E+LL+ SSC+VTT ++G  ALEFLGL +DD+  N    +      
Sbjct: 10  HVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQE 69

Query: 83  SKVNMIITDYCMPGMSGYELLKKIK 103
            ++N+IITDYCMPGM+GY+LLKK+K
Sbjct: 70  VEINLIITDYCMPGMTGYDLLKKVK 94

The following BLAST results are available for this feature:

BLAST of Spg028508 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466997.2	1.0e-40	85.05	PREDICTED: two-component response regulator ARR16-like, partial [Cucumis melo]	[more]
XP_038893219.1	2.0e-39	86.46	two-component response regulator ARR17-like [Benincasa hispida]	[more]
XP_031741127.1	5.7e-39	84.62	two-component response regulator ARR17 isoform X2 [Cucumis sativus]	[more]
XP_022146831.1	7.5e-39	85.26	two-component response regulator ARR17 [Momordica charantia]	[more]
XP_004146434.1	7.5e-39	83.81	two-component response regulator ARR17 isoform X1 [Cucumis sativus] >KGN50743.1 ...	[more]

BLAST of Spg028508 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPR6	1.3e-25	63.92	Two-component response regulator ARR17 OS=Arabidopsis thaliana OX=3702 GN=ARR17 ...	[more]
Q9SHC2	4.9e-25	68.75	Two-component response regulator ARR16 OS=Arabidopsis thaliana OX=3702 GN=ARR16 ...	[more]
Q9ZWS9	1.1e-21	63.41	Two-component response regulator ARR3 OS=Arabidopsis thaliana OX=3702 GN=ARR3 PE...	[more]
O80365	4.3e-21	56.47	Two-component response regulator ARR8 OS=Arabidopsis thaliana OX=3702 GN=ARR8 PE...	[more]
O80366	5.6e-21	55.06	Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE...	[more]

BLAST of Spg028508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CSH6	5.0e-41	85.05	two-component response regulator ARR16-like OS=Cucumis melo OX=3656 GN=LOC103504...	[more]
A0A0A0KMB0	3.6e-39	83.81	Response regulatory domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A6J1D0J7	3.6e-39	85.26	two-component response regulator ARR17 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1KBR6	2.0e-37	83.17	two-component response regulator ARR17-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FUE0	8.3e-36	81.19	two-component response regulator ARR17-like isoform X2 OS=Cucurbita moschata OX=...	[more]

BLAST of Spg028508 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56380.1	9.1e-27	63.92	response regulator 17	[more]
AT2G40670.1	3.5e-26	68.75	response regulator 16	[more]
AT2G40670.2	3.5e-26	68.75	response regulator 16	[more]
AT1G59940.1	8.0e-23	63.41	response regulator 3	[more]
AT2G41310.1	3.0e-22	56.47	response regulator 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.2300		coord: 4..105 e-value: 1.7E-21 score: 78.4
None	No IPR available	PANTHER	PTHR43874	TWO-COMPONENT RESPONSE REGULATOR	coord: 16..104
None	No IPR available	PANTHER	PTHR43874:SF50	TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED	coord: 16..104
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 24..102 e-value: 4.3E-12 score: 46.2
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 23..111 score: 24.866892
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 22..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028508.1	Spg028508.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity