Spg028501 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028501
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CCHC-type domain-containing protein
Location	scaffold7: 11516860 .. 11522798 (-)
RNA-Seq Expression	Spg028501
Synteny	Spg028501

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGAATATGGGATCCAGCGGTGACCAAAGCGGTGACCAGAACGAAAATCAACACATCACCATGGAAGAAAACAAAGGAACAGAGACCGTTTCGCCAGCAAACGACAACTCAAAAGAGATTGGAGAAATGGAAGAAGAAAACAACGTAGAAGACGAAGTTCTAAACAAAATGGAGGAACTGAAAATCACAGCAGCGGAGAAGGCTAAGGTGGTAGCCATAGACGACGAGGATCTTGACGAAGCATCAGACGATCTCAGAGACACAATACTTTGCAAAGTCCTCACACCAAAACTCATAAACCCAGAAATGTTCAAGAACTTCATGCCAAAAATCTGGAACAAAGAAGGAAGAGTTAAAATTAAACCGAAAGGAAGGAATACTTTTTTGTGCAAATTTAACAACAGTTGGGACAAGGAGAGAATACGGAAAGGAGGGCCATGGAATTACGACAAAGCCTTGCTAGCTATCGAAGACCTAAAAGGAGACAGTCGAATCTCACAAGCGGAATTCAGGCTTGTTAGCTTTTGGATCCATGTCCATGACTTACCTATGGTCTGTATGTGCAGGAAATGGGCCACTGCTCTAGGGGACTCGTTAGGAAGCTTTCAGGAGGTGGACTTAGAAGAGGAAGAGAACAATGGGGACAACACTCTGCGGATTCTTGTAAAAGTTGATATCACCCAACCTCTTAAGAGGGGTCTCATGGTGAAAATAGGATCGAAAGCAACAGAAACCTGGGTGAGGGTGACCTATGAGAGGCTGCCGGAATTCTGTTACGATTGCGGAAAGATAGGACATGTGAAATCAGAATGTGAAGAACCTCAGTCAAAAGAGGAAGAACCGATTTACGGTGAAGGGTTAAGAGCTACACCCATCTTGGGAGGTCAGAGCAAACAGAGATCAGAGGGATCGGGAGGGACAAGATCCTGCTGGGGGAGAGGTCGGGGCAGAAGAATGGACTTCCACAGATACAACACAGATAAGAGAGAGGACTGGAAGAAGGCCAAAGGAGATTCTTCTTGGTGGAGGAAAGTAGACCATCATCCCAGAAGCTTCCAACCAGTTTCCGATGAACGGCCGCCGGAGAGCTCGACAAGAGATGGTAGCCGGCCGAGGGGAAAAAGTGAACCCAATTCCCAAGACAGCCTAACGGCTAGTGAGATGGCAGAAGGAATGATGGAACTAGAAGAAAGAGAAGACATGACAAGAGAAAGTCAAGAAAAGGACAAAGAACCTTCAAAGGAACAGGTACGAGTGGACCAAATGGATGTCAGGATGAGTACAAGGGAAATCCCAAAAATTATTTGCAAAGAAGATCAGTCAAGAGATGGAAAACCAATGGAAAAAAATGAAAAAGCCAAAAGTGGCCCACAAGCGCCAGGCCTGCTGCGTGGGCCCAAAAAAGAAATGGAAAAGGCCTTAAATCATCGAGAAGTCAAGGAAAACAAAAACCAAGACTTGGTTACTGAACAGAAGGATCTTAATCAAGGACAAGGCAGCAACGCAAGGAAATGGAAGAGAAGAGCCAGAGCAGAAAGGAATGAGATGATTACAGAAGAATCAAAAAGCAAGATGGGCGGTTCTGGAAATTCTGGAAAAAGAACTGTAGAAGAAGGGGAAGAAAGATCTCGTGAAGCAAAAAAACAGTGTATGCCTTACTTCGGGGCCAACGAAGGGATATCGGCGGAGGCTGAATTTCAGCCCCGCCGGATGCAATGAAAATACTATGCTGGAACGTTCGGGGGATGGGGAACCCCCGAACGATCCGCAGCCTTAAGAATGAAATTAGGAAGACCTCCCCAAGCATAGTTTTTATATCCGAATCGAAGTGTAAAGCGTGTAAGGCAGAGTTGGTAAAGAACGAAATTGGTTTTGATTTTTGTTTTGGTGTTGACAGCAGAGGTTCTAGTGGTGGGCTGGCGCTTTATTGGAACAAGGAGTGTGATCTTTCTATCAACTCCTTTTCCAAGGGCCATATCGACACTACCATTAGAGACAAGGATTTCAGCTGGCGTTTTACTGGTTTCTACGGAGATCCGGACCCAAACAAAAGAGACGACTCTTGGCAACTTTTGGAACGTCTTAGCGATGTGAATAACCTCCCCTGGATTGTGGGAGGTGATTTCAATGAAATTATGTTCGATAAGGAGAAAGAAGGCGGGGCCCAAAAAGTTAAAAAAGGTATGGATAATTTCAGAGAAGCTATTAACAGTTGTAACCTCTTTGATCCAGGTTTTTCAGGGGCTAAAGAGACGTGGAGAAGAGGGAAGACAGCCTCCACTAGAATTAAAGAGAGGCTAGATCGTTTCCTAATCAACCAAGGCATGAATATCAGTTTCCAAGCCATTAAAATCCAGCATCTTGGTTACAACTCATCGGATCACCGTCCAATCCTTGCTAATATAGAAGCCCATGGCCCCAAAGCTTTTTCCCGAAGAAAAACTAGGAAGAAAAAGTTTGAGGAAAACTGGTTAGGCTTCCCCGAGAGTAGAGAGATTATCGATCAAACATGGAAGGCAGTGAGAGGGCAAGAAATCCATGACTTTACTAGGAAGCTTAACCTGTGCTTAAACAATCTTGACTCTTGGCACCGTAATAGAAGAGGAGGATCCATTAGGGCTGCGATTGACAAGAAAATGGAAGCCATCAGCATACTTGAAAAGAATGATTCAGAAGCAAACGTTCCAAATATCCTTAAGGCAGAGAAAGATCTTGAAAGCTTGCTGGAAGAAGAAGAAAGATACTGGAAGATACGCTCTCGAGAGGATTGGCTAAAGTGGGGAGATAGGAACACCAAATGGTTCCATAGTAAAGCTTCAGAGAGAAGGAAAAAGAACAAAATCTCAGGCATTATGGATGATAACGGGAATTGGGTTGAAGATGAAGTGAAGATAGGAGAGGTCGCCACCAAATACTTTAAAAACTTGTTCTCCACATCAAATCCAAAAGAAGATAGCATTGGTAAAGTTTTGGAGGGCATTACCAGGAAAGTCTCAGAAGCTCAAAATAACAAACTCTCCAGACCTTTTACAAAGAGTGATATAGAAGGAGCTCTAAAAAATATGAACCCCTCCAAGGCACCGGGTGAAGATGGAATACACGCTATGTTCTTTCAAAATTTCTGGGACATAGTTGGGGAAGATACCACAAAGATCTGTTTGGACATTTTAAATGGGACAAAGAGCGCAAGGGCAGTCAATAGAACTCTAATAGCTCTTATTCCGAAAGTCAAGGAGCCAAAAGGGATGGGGAACTACAGACCGATTAGCTTGTGTAATGTAATCTACAAACTAGTGGCAAAGGCTATTGCAAACAGAATGAAGCACACCCTAGACGATATCATATCCCCCAATCAAGCAGCTTTTGTTCCAAAAAGGCTCATCACGGATAATGTGCTCGTGGGTTTTGAATGCCTTCACTCTCTAAACAACAAAAGAAAAGGCAAGGAAGGGTACATAGCCATGAAACTGGACATGAGCAAGGCGTACGACCGTGTGGAATGGGAGTTCATAAAGAAAACAATGCTGAAGATGGGCTTTAAAGATGCCTGGGTTCAAAAAGTAATGGATTGCATTGAAACAGTGGAGTACTCAGTGTTGATAAATGGGGAACCCCAAGAAGCTTTCTATCCCAGGAGAGGATTACGACAGGGAGATCCTTTATCGCCATACATATTTCTGATTTGTGCTGAAGGCCTATCTGCACTTCTAAACAGGGAAGAAATGCACTTTAAAAATTTCAAAGGTTTAAAGATTAACAAACGGTGCCCCTCACTTTCTCATTTGTTTTTTGCAGATGATAGCCTAATTATGTGCAGAGCGGAGGAATCGGATTGCAAGACTATAAAGAGAGTTCTACACACCTATGAAGAAGCCTCGGGACAGACCATAAATATGGAGAAATCCTCCATGATGACAAGCAAAAATATATCCACGGCAAAAGCTAAGAAACTCAGTGAAATATTGGGGATAACAAAGGTCGAGGAGTTAGGCTATTATCTTGGCATGCCTTCGCAAACACAAAAGAACAAGAGAAATGTCTTCAAAAAGGTCAAAGACAGAGTGTGGAAAGCATTGCAAAATTGGAAAGGAAGGATGTTCTCAGCTGGTGGAAAAGAAATCCTCATAAAGGCCGTTGTACAGGCAATTCCAACATTCACAATGAGCTGCTTCAAACTACCTGTGAGCTTATGTGATGAAATCAACAAACTATGTGCAAGGTTTTGGTGGGGAGAAGCTCGAGGGAAAGGCAAGGCTCACTGGATAAGTTGGAAAAAACTATGCACCAGCAAGGATCGAGGAGGACTGGGTTTCAAAGATTTAAAACTTTTTAATCAAGCAATGCTTGCAAAAGTCAGTTGGAGGATCATCAAAAGCCCCAACAGCCTTCTATCCACAATGCTCAAAGGGAAATATTTCAAAGGAAGGGACTTTCTAACAGCACCTCTGGGCTCTAACCCATCATTAACATGGAGAAGCATAGTGTGGGGTCGTGATCTGTTTAAAAAGGGATACAGGTGGAAGGTAGGCAACGGGAGATATATCCAAATAGACCAAGACCCGTGGCTTGACAGTGAAGGGAGCAAAATTCCTATACTAACAACAAATGACCTAAAAGGGAAAAGGGTCCAAGAGATAATTGATGATCAGGGGAATTGGATAGAAGAAAAAATCTGGAAGAACTTCACAGTCCTGGATGCCGAAACCATTCTCAATACTCCAAGGGGGGAGAGAGATAGAAAGGATGAAATAATTTGGAGTAAAGATAAGAAGGGTATGTTTACTGTTAAGAGCGCGTACTATCTAGCCCAACAACAGGCCAACCACTCTGAAGCCTCAACGTCAAATGAAACAAATGCCAACAAGGAATGGAGGAAGTTTTGGAAACTCAAAGCAATCCCAAAGGCAAAAATATGTGTGTGGAGGATCATCCACGACTCGATCCCCACAAACATTAATATTTCGAAAAAAGGGATACATACTAACACACTCTGTTATTTTTGCAGGACACGTGACGAATCCACAAAACATGCTCTATGGGAGTGCAAAATGGTAAAAAGGATTTGGAACCAATACATCCCTCTCACGATAAATCTTTTTTCCTTGAATAGGGGAAATTGGAACCCAATGGAATACTGGACATGGATGATGAAGAATTTAAAGGAGGAAGAGCTAGAGCAAGCAATCCTGATCCTATGGAGCCTATGGAGCTACAGAAATACAATCGCTCAAAGAAGCAGCAAGCCAGACAAGATTTCAATGATACGAGCAGTCGAAAGAAGCCTAGAATTAAGAGAGGCAGACGAAAATTCATACCTGAATATTCAGCATCGAGGCAATCGACCCAAATTAAAGACCCTCATGAGTCACGGAAGATGGACTCCGCCGCCGACTAATACGTGGAAATTAAATACGGATGCATCCTGGAGCGACAAGCAGCAGAGAGGTGGAATTGGATGGATACTTCGTGACTCTTCAGGGTCTTCTATAAATCTGGGATTTCGACGCATTAGCCGAAAATGGTCCATAAAATTTCTGGAATTGAAGGCGATTGTTGAAGGTCTGAAGAACATACCTCAAGTCTATTTCGGAAATGGCGATCAAATATCCACCCCCATCTTTGTCGAATCAGACGCGCTAAACATCATCAAGCTTATAAACGAAGAAGATGAGGACATCTCGGAAATCTCCTTCCTCACCGAAGAGATTCGCCGATTGAAGAATCTGTTTGTTGAGATTCATTTTGTTTTTTGCCCAAGAGCTCTAAACGCAGCTGCCGATCGTCTCGCACGAGCAGCAATTTCCCCCCCTCTGAATTCCGTTTTGGATACCTCTTCCACAGTGGAAGAAGGTGCGGGTGTATGGAATGGGCTTCCCCCGGTTTGGGTTAGAAACCTCTTAAATGAGGTAGATGTAACTAACTTTTCCTATTATTAA

mRNA sequence

ATGCTGAATATGGGATCCAGCGGTGACCAAAGCGGTGACCAGAACGAAAATCAACACATCACCATGGAAGAAAACAAAGGAACAGAGACCGTTTCGCCAGCAAACGACAACTCAAAAGAGATTGGAGAAATGGAAGAAGAAAACAACGTAGAAGACGAAGTTCTAAACAAAATGGAGGAACTGAAAATCACAGCAGCGGAGAAGGCTAAGGTGGTAGCCATAGACGACGAGGATCTTGACGAAGCATCAGACGATCTCAGAGACACAATACTTTGCAAAGTCCTCACACCAAAACTCATAAACCCAGAAATGTTCAAGAACTTCATGCCAAAAATCTGGAACAAAGAAGGAAGAGTTAAAATTAAACCGAAAGGAAGGAATACTTTTTTGTGCAAATTTAACAACAGTTGGGACAAGGAGAGAATACGGAAAGGAGGGCCATGGAATTACGACAAAGCCTTGCTAGCTATCGAAGACCTAAAAGGAGACAGTCGAATCTCACAAGCGGAATTCAGGCTTGTTAGCTTTTGGATCCATGTCCATGACTTACCTATGGTCTGTATGTGCAGGAAATGGGCCACTGCTCTAGGGGACTCGTTAGGAAGCTTTCAGGAGGTGGACTTAGAAGAGGAAGAGAACAATGGGGACAACACTCTGCGGATTCTTGTAAAAGTTGATATCACCCAACCTCTTAAGAGGGGTCTCATGGTGAAAATAGGATCGAAAGCAACAGAAACCTGGGTGAGGGTGACCTATGAGAGGCTGCCGGAATTCTGTTACGATTGCGGAAAGATAGGACATGTGAAATCAGAATGTGAAGAACCTCAGTCAAAAGAGGAAGAACCGATTTACGGTGAAGGGTTAAGAGCTACACCCATCTTGGGAGGTCAGAGCAAACAGAGATCAGAGGGATCGGGAGGGACAAGATCCTGCTGGGGGAGAGGTCGGGGCAGAAGAATGGACTTCCACAGATACAACACAGATAAGAGAGAGGACTGGAAGAAGGCCAAAGGAGATTCTTCTTGGTGGAGGAAAGTAGACCATCATCCCAGAAGCTTCCAACCAGTTTCCGATGAACGGCCGCCGGAGAGCTCGACAAGAGATGGTAGCCGGCCGAGGGGAAAAAGTGAACCCAATTCCCAAGACAGCCTAACGGCTAGTGAGATGGCAGAAGGAATGATGGAACTAGAAGAAAGAGAAGACATGACAAGAGAAAGTCAAGAAAAGGACAAAGAACCTTCAAAGGAACAGGTACGAGTGGACCAAATGGATGTCAGGATGAGTACAAGGGAAATCCCAAAAATTATTTGCAAAGAAGATCAGTCAAGAGATGGAAAACCAATGGAAAAAAATGAAAAAGCCAAAAGTGGCCCACAAGCGCCAGGCCTGCTGCGTGGGCCCAAAAAAGAAATGGAAAAGGCCTTAAATCATCGAGAAGTCAAGGAAAACAAAAACCAAGACTTGGTTACTGAACAGAAGGATCTTAATCAAGGACAAGGCAGCAACGCAAGGAAATGGAAGAGAAGAGCCAGAGCAGAAAGGAATGAGATGATTACAGAAGAATCAAAAAGCAAGATGGGCGGGAAGACAGCCTCCACTAGAATTAAAGAGAGGCTAGATCGTTTCCTAATCAACCAAGGCATGAATATCAGTTTCCAAGCCATTAAAATCCAGCATCTTGGTTACAACTCATCGGATCACCGTCCAATCCTTGCTAATATAGAAGCCCATGGCCCCAAAGCTTTTTCCCGAAGAAAAACTAGGAAGAAAAAGTTTGAGGAAAACTGGTTAGGCTTCCCCGAGAGTAGAGAGATTATCGATCAAACATGGAAGGCAGTGAGAGGGCAAGAAATCCATGACTTTACTAGGAAGCTTAACCTGACACGTGACGAATCCACAAAACATGCTCTATGGGAGTGCAAAATGGTAAAAAGGATTTGGAACCAATACATCCCTCTCACGATAAATCTTTTTTCCTTGAATAGGGGAAATTGGAACCCAATGGAATACTGGACATGGATGATGAAGAATTTAAAGGAGGAAGAGCTAGAGCAAGCAATCCTGATCCTATGGAGCCTATGGAGCTACAGAAATACAATCGCTCAAAGAAGCAGCAAGCCAGACAAGATTTCAATGATACGAGCAGTCGAAAGAAGCCTAGAATTAAGAGAGGCAGACGAAAATTCATACCTGAATATTCAGCATCGAGGCAATCGACCCAAATTAAAGACCCTCATGAGTCACGGAAGATGGACTCCGCCGCCGACTAATACGTGGAAATTAAATACGGATGCATCCTGGAGCGACAAGCAGCAGAGAGGTGGAATTGGATGGATACTTCGTGACTCTTCAGGGTCTTCTATAAATCTGGGATTTCGACGCATTAGCCGAAAATGGTCCATAAAATTTCTGGAATTGAAGGCGATTGTTGAAGGTCTGAAGAACATACCTCAAGTCTATTTCGGAAATGGCGATCAAATATCCACCCCCATCTTTGTCGAATCAGACGCGCTAAACATCATCAAGCTTATAAACGAAGAAGATGAGGACATCTCGGAAATCTCCTTCCTCACCGAAGAGATTCGCCGATTGAAGAATCTGTTTGTTGAGATTCATTTTGTTTTTTGCCCAAGAGCTCTAAACGCAGCTGCCGATCGTCTCGCACGAGCAGCAATTTCCCCCCCTCTGAATTCCGTTTTGGATACCTCTTCCACAGTGGAAGAAGGTGCGGGTGTATGGAATGGGCTTCCCCCGGTTTGGGTTAGAAACCTCTTAAATGAGGTAGATGTAACTAACTTTTCCTATTATTAA

Coding sequence (CDS)

ATGCTGAATATGGGATCCAGCGGTGACCAAAGCGGTGACCAGAACGAAAATCAACACATCACCATGGAAGAAAACAAAGGAACAGAGACCGTTTCGCCAGCAAACGACAACTCAAAAGAGATTGGAGAAATGGAAGAAGAAAACAACGTAGAAGACGAAGTTCTAAACAAAATGGAGGAACTGAAAATCACAGCAGCGGAGAAGGCTAAGGTGGTAGCCATAGACGACGAGGATCTTGACGAAGCATCAGACGATCTCAGAGACACAATACTTTGCAAAGTCCTCACACCAAAACTCATAAACCCAGAAATGTTCAAGAACTTCATGCCAAAAATCTGGAACAAAGAAGGAAGAGTTAAAATTAAACCGAAAGGAAGGAATACTTTTTTGTGCAAATTTAACAACAGTTGGGACAAGGAGAGAATACGGAAAGGAGGGCCATGGAATTACGACAAAGCCTTGCTAGCTATCGAAGACCTAAAAGGAGACAGTCGAATCTCACAAGCGGAATTCAGGCTTGTTAGCTTTTGGATCCATGTCCATGACTTACCTATGGTCTGTATGTGCAGGAAATGGGCCACTGCTCTAGGGGACTCGTTAGGAAGCTTTCAGGAGGTGGACTTAGAAGAGGAAGAGAACAATGGGGACAACACTCTGCGGATTCTTGTAAAAGTTGATATCACCCAACCTCTTAAGAGGGGTCTCATGGTGAAAATAGGATCGAAAGCAACAGAAACCTGGGTGAGGGTGACCTATGAGAGGCTGCCGGAATTCTGTTACGATTGCGGAAAGATAGGACATGTGAAATCAGAATGTGAAGAACCTCAGTCAAAAGAGGAAGAACCGATTTACGGTGAAGGGTTAAGAGCTACACCCATCTTGGGAGGTCAGAGCAAACAGAGATCAGAGGGATCGGGAGGGACAAGATCCTGCTGGGGGAGAGGTCGGGGCAGAAGAATGGACTTCCACAGATACAACACAGATAAGAGAGAGGACTGGAAGAAGGCCAAAGGAGATTCTTCTTGGTGGAGGAAAGTAGACCATCATCCCAGAAGCTTCCAACCAGTTTCCGATGAACGGCCGCCGGAGAGCTCGACAAGAGATGGTAGCCGGCCGAGGGGAAAAAGTGAACCCAATTCCCAAGACAGCCTAACGGCTAGTGAGATGGCAGAAGGAATGATGGAACTAGAAGAAAGAGAAGACATGACAAGAGAAAGTCAAGAAAAGGACAAAGAACCTTCAAAGGAACAGGTACGAGTGGACCAAATGGATGTCAGGATGAGTACAAGGGAAATCCCAAAAATTATTTGCAAAGAAGATCAGTCAAGAGATGGAAAACCAATGGAAAAAAATGAAAAAGCCAAAAGTGGCCCACAAGCGCCAGGCCTGCTGCGTGGGCCCAAAAAAGAAATGGAAAAGGCCTTAAATCATCGAGAAGTCAAGGAAAACAAAAACCAAGACTTGGTTACTGAACAGAAGGATCTTAATCAAGGACAAGGCAGCAACGCAAGGAAATGGAAGAGAAGAGCCAGAGCAGAAAGGAATGAGATGATTACAGAAGAATCAAAAAGCAAGATGGGCGGGAAGACAGCCTCCACTAGAATTAAAGAGAGGCTAGATCGTTTCCTAATCAACCAAGGCATGAATATCAGTTTCCAAGCCATTAAAATCCAGCATCTTGGTTACAACTCATCGGATCACCGTCCAATCCTTGCTAATATAGAAGCCCATGGCCCCAAAGCTTTTTCCCGAAGAAAAACTAGGAAGAAAAAGTTTGAGGAAAACTGGTTAGGCTTCCCCGAGAGTAGAGAGATTATCGATCAAACATGGAAGGCAGTGAGAGGGCAAGAAATCCATGACTTTACTAGGAAGCTTAACCTGACACGTGACGAATCCACAAAACATGCTCTATGGGAGTGCAAAATGGTAAAAAGGATTTGGAACCAATACATCCCTCTCACGATAAATCTTTTTTCCTTGAATAGGGGAAATTGGAACCCAATGGAATACTGGACATGGATGATGAAGAATTTAAAGGAGGAAGAGCTAGAGCAAGCAATCCTGATCCTATGGAGCCTATGGAGCTACAGAAATACAATCGCTCAAAGAAGCAGCAAGCCAGACAAGATTTCAATGATACGAGCAGTCGAAAGAAGCCTAGAATTAAGAGAGGCAGACGAAAATTCATACCTGAATATTCAGCATCGAGGCAATCGACCCAAATTAAAGACCCTCATGAGTCACGGAAGATGGACTCCGCCGCCGACTAATACGTGGAAATTAAATACGGATGCATCCTGGAGCGACAAGCAGCAGAGAGGTGGAATTGGATGGATACTTCGTGACTCTTCAGGGTCTTCTATAAATCTGGGATTTCGACGCATTAGCCGAAAATGGTCCATAAAATTTCTGGAATTGAAGGCGATTGTTGAAGGTCTGAAGAACATACCTCAAGTCTATTTCGGAAATGGCGATCAAATATCCACCCCCATCTTTGTCGAATCAGACGCGCTAAACATCATCAAGCTTATAAACGAAGAAGATGAGGACATCTCGGAAATCTCCTTCCTCACCGAAGAGATTCGCCGATTGAAGAATCTGTTTGTTGAGATTCATTTTGTTTTTTGCCCAAGAGCTCTAAACGCAGCTGCCGATCGTCTCGCACGAGCAGCAATTTCCCCCCCTCTGAATTCCGTTTTGGATACCTCTTCCACAGTGGAAGAAGGTGCGGGTGTATGGAATGGGCTTCCCCCGGTTTGGGTTAGAAACCTCTTAAATGAGGTAGATGTAACTAACTTTTCCTATTATTAA

Protein sequence

MLNMGSSGDQSGDQNENQHITMEENKGTETVSPANDNSKEIGEMEEENNVEDEVLNKMEELKITAAEKAKVVAIDDEDLDEASDDLRDTILCKVLTPKLINPEMFKNFMPKIWNKEGRVKIKPKGRNTFLCKFNNSWDKERIRKGGPWNYDKALLAIEDLKGDSRISQAEFRLVSFWIHVHDLPMVCMCRKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQSKEEEPIYGEGLRATPILGGQSKQRSEGSGGTRSCWGRGRGRRMDFHRYNTDKREDWKKAKGDSSWWRKVDHHPRSFQPVSDERPPESSTRDGSRPRGKSEPNSQDSLTASEMAEGMMELEEREDMTRESQEKDKEPSKEQVRVDQMDVRMSTREIPKIICKEDQSRDGKPMEKNEKAKSGPQAPGLLRGPKKEMEKALNHREVKENKNQDLVTEQKDLNQGQGSNARKWKRRARAERNEMITEESKSKMGGKTASTRIKERLDRFLINQGMNISFQAIKIQHLGYNSSDHRPILANIEAHGPKAFSRRKTRKKKFEENWLGFPESREIIDQTWKAVRGQEIHDFTRKLNLTRDESTKHALWECKMVKRIWNQYIPLTINLFSLNRGNWNPMEYWTWMMKNLKEEELEQAILILWSLWSYRNTIAQRSSKPDKISMIRAVERSLELREADENSYLNIQHRGNRPKLKTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAISPPLNSVLDTSSTVEEGAGVWNGLPPVWVRNLLNEVDVTNFSYY

Homology

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BLAST of Spg028501 vs. NCBI nr
Match: TXG68535.1 (hypothetical protein EZV62_003470 [Acer yangbiense])

HSP 1 Score: 176.4 bits (446), Expect = 1.1e-39
Identity = 89/230 (38.70%), Postives = 142/230 (61.74%), Query Frame = 0


Query: 84  DDLRDTILCKVLTPKLINPEMFKNFMPKIWNKEGRVKIKPKGRNTFLCKFNNSWDKERIR 143
           +D+   ++ KVL+ K +N E FK  + ++W+  G V+I+  G NTF+  FNN  D++RI 
Sbjct: 35  EDVDHCLVGKVLSGKRVNREAFKTVIEQLWSPFGNVEIEVVGDNTFMFYFNNPEDRDRIW 94

Query: 144 KGGPWNYDKALLAIEDLKGDSRISQAEFRLVSFWIHVHDLPMVCMCRKWATALGDSLGSF 203
           + GPW++D++L+ +E  +G   ISQ  F    FW+ +HD+P++CM ++ A  L + +G  
Sbjct: 95  QRGPWHFDRSLIVLEKPEGMGDISQLCFNKAEFWVQIHDIPIMCMNKRMAKWLAEQIGRV 154

Query: 204 QEVDLEEEENNGDNTLRILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCG 263
            E+ +E  E  G   LR+ V +DI++PLKR L +K+        V + YERLPEFCY CG
Sbjct: 155 VEIPMESRECWG-KFLRVKVLIDISKPLKRWLRLKLDRSDNIVVVGLKYERLPEFCYACG 214

Query: 264 KIGHVKSECEEPQSKEE-----EPIYGEGLRATPILGGQSKQRSEGSGGT 309
           K+GH  ++C + ++K+E     +  +G  LRA+P    + K  S+GSGGT
Sbjct: 215 KVGHGINKCTDTEAKKEAIEGPKTKFGSWLRASPTDKFKLKSSSQGSGGT 263

[Close]

BLAST of Spg028501 vs. NCBI nr
Match: TXG48193.1 (hypothetical protein EZV62_027487 [Acer yangbiense])

HSP 1 Score: 168.3 bits (425), Expect = 3.1e-37
Identity = 95/279 (34.05%), Postives = 156/279 (55.91%), Query Frame = 0


Query: 51  EDEVLNKMEELKITAAEKAKVVAIDDEDLDEASDDLRDTILCKVLTPKLINPEMFKNFMP 110
           E E+    E L +   E A V  I ++ + +  +D+   ++ KVLT K +N E FK  + 
Sbjct: 3   EAEITQLYENLSL-EDEDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIE 62

Query: 111 KIWNKEGRVKIKPKGRNTFLCKFNNSWDKERIRKGGPWNYDKALLAIEDLKGDSRISQAE 170
           +IWN+ G+V+++  G NTF+  F N   + ++   GPW + K+L+ +E  KG   I++ +
Sbjct: 63  QIWNQFGQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLK 122

Query: 171 FRLVSFWIHVHDLPMVCMCRKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQP 230
           F    FW+ +HD+P++CM ++    L + +G   E+  E  E  G   +R+ V+VDIT+P
Sbjct: 123 FNQADFWVQIHDIPIMCMNQRTTKWLAEYIGEVVEIPTESRECWG-KYVRVKVQVDITKP 182

Query: 231 LKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQSKE-----EEPIYG 290
           LKR L +K+G     T V + YERLP+FC+ CG+IGH   EC +  +K      ++  +G
Sbjct: 183 LKRWLRIKLGKYEEITMVALKYERLPDFCFACGRIGHSVRECLDEDAKRAALDGQQTKFG 242

Query: 291 EGLRATPILGGQSKQRSEGSGGTRSCWGRGRGRRMDFHR 325
             +RATPI   ++K  S  +G +       RGR ++  R
Sbjct: 243 SWMRATPIDKSKTKSISLTTGSSSE-----RGRSVEGSR 274

[Close]

BLAST of Spg028501 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 167.5 bits (423), Expect = 5.3e-37
Identity = 87/255 (34.12%), Postives = 136/255 (53.33%), Query Frame = 0


Query: 52  DEVLNKMEELKITAAEKAKVVAIDDEDLDEASDDLRDTILCKVLTPKLINPEMFKNFMPK 111
           D++  K E+L +   +   +  I     +     L  +++ K +T K+IN E FK+ +  
Sbjct: 4   DDISRKCEKLSLD-DDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTIST 63

Query: 112 IWNKEGRVKIKPKGRNTFLCKFNNSWDKERIRKGGPWNYDKALLAIEDLKGDSRISQAEF 171
           IW  +  V ++  G N F  +F N WD++RI +GGPW +DK LL + +  G  +++  +F
Sbjct: 64  IWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQF 123

Query: 172 RLVSFWIHVHDLPMVCMCRKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPL 231
           R V FWI +H+LP+ C+ R+    LG  +G  +E+D  E        +RI V +D+  PL
Sbjct: 124 RYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNPL 183

Query: 232 KRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQSKEEEPIYGEGLRAT 291
           KRGL V +G       V + YERLP FCY CGKIGH+  +C       +E       +  
Sbjct: 184 KRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDC---PLNTKEITSSSSFKFG 243

Query: 292 PILGGQSKQRSEGSG 307
           P +   S+ RS+G+G
Sbjct: 244 PWMRAVSRTRSKGTG 254

[Close]

BLAST of Spg028501 vs. NCBI nr
Match: TXG48504.1 (hypothetical protein EZV62_024379 [Acer yangbiense])

HSP 1 Score: 166.8 bits (421), Expect = 9.1e-37
Identity = 95/250 (38.00%), Postives = 140/250 (56.00%), Query Frame = 0


Query: 80  DEASDDLRDTILCKVLTPKLINPEMFKNFMPKIWNKEGRVKIKPKGRNTFLCKFNNSWDK 139
           +E   D+   ++ KVL+ + +N E FK  + +IW+  G V I+  G+NTFL  F N  D+
Sbjct: 31  NEGVKDVHHCLVGKVLSSRRVNREAFKTIIEQIWSPFGTVDIEAVGKNTFLFYFANPEDR 90

Query: 140 ERIRKGGPWNYDKALLAIEDLKGDSRISQAEFRLVSFWIHVHDLPMVCMCRKWATALGDS 199
            RI + GPW++D+ LLA+E L+G   ISQ  F    FW+ +HD+P++CM R  A  L   
Sbjct: 91  NRIWRRGPWHFDRHLLALEKLEGTGNISQLSFSKAEFWVQIHDIPIMCMNRCMAKWLAAQ 150

Query: 200 LGSFQEVDLEEEENNGDNTLRILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFC 259
           +G   E+  +  E  G   LR+ V +DI++PLKR L +K+        V + YERLPEFC
Sbjct: 151 IGDIIEIPSKSRECWG-KFLRVKVLIDISRPLKRWLRLKLDQSDNIVMVNLKYERLPEFC 210

Query: 260 YDCGKIGHVKSECEEPQSKE---EEPI--YGEGLRATPILGGQSKQRSEGSGGT---RSC 319
           Y CG++GH   +C + ++K+   E PI  +G  +RA+     Q K  S  SGG+      
Sbjct: 211 YACGRLGHSIGDCNDVEAKKAAVEGPITKFGSWMRASLQDKIQVKASSMSSGGSSDKERS 270

Query: 320 WGRGRGRRMD 322
            G   GR  D
Sbjct: 271 LGESSGRDSD 279

[Close]

BLAST of Spg028501 vs. NCBI nr
Match: TXG57113.1 (hypothetical protein EZV62_018426 [Acer yangbiense])

HSP 1 Score: 166.8 bits (421), Expect = 9.1e-37
Identity = 81/225 (36.00%), Postives = 132/225 (58.67%), Query Frame = 0


Query: 55  LNKMEELKITAAEKAKVVAIDDEDLDEASDDLRDTILCKVLTPKLINPEMFKNFMPKIWN 114
           + K+ E    A E   ++ + +E   +  +D+   ++ KVL+ K +N E FK  + +IWN
Sbjct: 6   ITKLYESLFIAEEDRAILEMSEETSVDGVEDVDRCLVVKVLSGKKVNREAFKGLIEQIWN 65

Query: 115 KEGRVKIKPKGRNTFLCKFNNSWDKERIRKGGPWNYDKALLAIEDLKGDSRISQAEFRLV 174
             G+V+++  G N F+  F N+ D+ R+   GPW++  +L+ +E   G   IS+  F   
Sbjct: 66  PNGQVEVELVGDNRFMFYFINNEDRNRVWNRGPWHFGNSLIVLEKPVGPGNISKLSFNKA 125

Query: 175 SFWIHVHDLPMVCMCRKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPLKRG 234
            FW+ +HD+P++CM R+ A  L + +G   E+ LE  E  G   +R+ V++DI +PLKR 
Sbjct: 126 DFWVQIHDIPILCMNRRTAKWLAEQIGEVVEIPLESRECWG-KFMRVKVRIDILKPLKRW 185

Query: 235 LMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQSKE 280
           L +K+G     T V + YERLPEFCY CGKIGH   EC + ++++
Sbjct: 186 LRLKLGKCDEITTVGLKYERLPEFCYACGKIGHGIKECFDEEARQ 229

[Close]

BLAST of Spg028501 vs. ExPASy TrEMBL
Match: A0A5C7IHI0 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_003470 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.5e-40
Identity = 89/230 (38.70%), Postives = 142/230 (61.74%), Query Frame = 0


Query: 84  DDLRDTILCKVLTPKLINPEMFKNFMPKIWNKEGRVKIKPKGRNTFLCKFNNSWDKERIR 143
           +D+   ++ KVL+ K +N E FK  + ++W+  G V+I+  G NTF+  FNN  D++RI 
Sbjct: 35  EDVDHCLVGKVLSGKRVNREAFKTVIEQLWSPFGNVEIEVVGDNTFMFYFNNPEDRDRIW 94

Query: 144 KGGPWNYDKALLAIEDLKGDSRISQAEFRLVSFWIHVHDLPMVCMCRKWATALGDSLGSF 203
           + GPW++D++L+ +E  +G   ISQ  F    FW+ +HD+P++CM ++ A  L + +G  
Sbjct: 95  QRGPWHFDRSLIVLEKPEGMGDISQLCFNKAEFWVQIHDIPIMCMNKRMAKWLAEQIGRV 154

Query: 204 QEVDLEEEENNGDNTLRILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCG 263
            E+ +E  E  G   LR+ V +DI++PLKR L +K+        V + YERLPEFCY CG
Sbjct: 155 VEIPMESRECWG-KFLRVKVLIDISKPLKRWLRLKLDRSDNIVVVGLKYERLPEFCYACG 214

Query: 264 KIGHVKSECEEPQSKEE-----EPIYGEGLRATPILGGQSKQRSEGSGGT 309
           K+GH  ++C + ++K+E     +  +G  LRA+P    + K  S+GSGGT
Sbjct: 215 KVGHGINKCTDTEAKKEAIEGPKTKFGSWLRASPTDKFKLKSSSQGSGGT 263

[Close]

BLAST of Spg028501 vs. ExPASy TrEMBL
Match: A0A5C7GU64 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027487 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-37
Identity = 95/279 (34.05%), Postives = 156/279 (55.91%), Query Frame = 0


Query: 51  EDEVLNKMEELKITAAEKAKVVAIDDEDLDEASDDLRDTILCKVLTPKLINPEMFKNFMP 110
           E E+    E L +   E A V  I ++ + +  +D+   ++ KVLT K +N E FK  + 
Sbjct: 3   EAEITQLYENLSL-EDEDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIE 62

Query: 111 KIWNKEGRVKIKPKGRNTFLCKFNNSWDKERIRKGGPWNYDKALLAIEDLKGDSRISQAE 170
           +IWN+ G+V+++  G NTF+  F N   + ++   GPW + K+L+ +E  KG   I++ +
Sbjct: 63  QIWNQFGQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLK 122

Query: 171 FRLVSFWIHVHDLPMVCMCRKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQP 230
           F    FW+ +HD+P++CM ++    L + +G   E+  E  E  G   +R+ V+VDIT+P
Sbjct: 123 FNQADFWVQIHDIPIMCMNQRTTKWLAEYIGEVVEIPTESRECWG-KYVRVKVQVDITKP 182

Query: 231 LKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQSKE-----EEPIYG 290
           LKR L +K+G     T V + YERLP+FC+ CG+IGH   EC +  +K      ++  +G
Sbjct: 183 LKRWLRIKLGKYEEITMVALKYERLPDFCFACGRIGHSVRECLDEDAKRAALDGQQTKFG 242

Query: 291 EGLRATPILGGQSKQRSEGSGGTRSCWGRGRGRRMDFHR 325
             +RATPI   ++K  S  +G +       RGR ++  R
Sbjct: 243 SWMRATPIDKSKTKSISLTTGSSSE-----RGRSVEGSR 274

[Close]

BLAST of Spg028501 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.6e-37
Identity = 87/255 (34.12%), Postives = 136/255 (53.33%), Query Frame = 0


Query: 52  DEVLNKMEELKITAAEKAKVVAIDDEDLDEASDDLRDTILCKVLTPKLINPEMFKNFMPK 111
           D++  K E+L +   +   +  I     +     L  +++ K +T K+IN E FK+ +  
Sbjct: 4   DDISRKCEKLSLD-DDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTIST 63

Query: 112 IWNKEGRVKIKPKGRNTFLCKFNNSWDKERIRKGGPWNYDKALLAIEDLKGDSRISQAEF 171
           IW  +  V ++  G N F  +F N WD++RI +GGPW +DK LL + +  G  +++  +F
Sbjct: 64  IWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQF 123

Query: 172 RLVSFWIHVHDLPMVCMCRKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPL 231
           R V FWI +H+LP+ C+ R+    LG  +G  +E+D  E        +RI V +D+  PL
Sbjct: 124 RYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNPL 183

Query: 232 KRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQSKEEEPIYGEGLRAT 291
           KRGL V +G       V + YERLP FCY CGKIGH+  +C       +E       +  
Sbjct: 184 KRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDC---PLNTKEITSSSSFKFG 243

Query: 292 PILGGQSKQRSEGSG 307
           P +   S+ RS+G+G
Sbjct: 244 PWMRAVSRTRSKGTG 254

[Close]

BLAST of Spg028501 vs. ExPASy TrEMBL
Match: A0A5C7GUN2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024379 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.4e-37
Identity = 95/250 (38.00%), Postives = 140/250 (56.00%), Query Frame = 0


Query: 80  DEASDDLRDTILCKVLTPKLINPEMFKNFMPKIWNKEGRVKIKPKGRNTFLCKFNNSWDK 139
           +E   D+   ++ KVL+ + +N E FK  + +IW+  G V I+  G+NTFL  F N  D+
Sbjct: 31  NEGVKDVHHCLVGKVLSSRRVNREAFKTIIEQIWSPFGTVDIEAVGKNTFLFYFANPEDR 90

Query: 140 ERIRKGGPWNYDKALLAIEDLKGDSRISQAEFRLVSFWIHVHDLPMVCMCRKWATALGDS 199
            RI + GPW++D+ LLA+E L+G   ISQ  F    FW+ +HD+P++CM R  A  L   
Sbjct: 91  NRIWRRGPWHFDRHLLALEKLEGTGNISQLSFSKAEFWVQIHDIPIMCMNRCMAKWLAAQ 150

Query: 200 LGSFQEVDLEEEENNGDNTLRILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFC 259
           +G   E+  +  E  G   LR+ V +DI++PLKR L +K+        V + YERLPEFC
Sbjct: 151 IGDIIEIPSKSRECWG-KFLRVKVLIDISRPLKRWLRLKLDQSDNIVMVNLKYERLPEFC 210

Query: 260 YDCGKIGHVKSECEEPQSKE---EEPI--YGEGLRATPILGGQSKQRSEGSGGT---RSC 319
           Y CG++GH   +C + ++K+   E PI  +G  +RA+     Q K  S  SGG+      
Sbjct: 211 YACGRLGHSIGDCNDVEAKKAAVEGPITKFGSWMRASLQDKIQVKASSMSSGGSSDKERS 270

Query: 320 WGRGRGRRMD 322
            G   GR  D
Sbjct: 271 LGESSGRDSD 279

[Close]

BLAST of Spg028501 vs. ExPASy TrEMBL
Match: A0A5C7HJ97 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018426 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.4e-37
Identity = 81/225 (36.00%), Postives = 132/225 (58.67%), Query Frame = 0


Query: 55  LNKMEELKITAAEKAKVVAIDDEDLDEASDDLRDTILCKVLTPKLINPEMFKNFMPKIWN 114
           + K+ E    A E   ++ + +E   +  +D+   ++ KVL+ K +N E FK  + +IWN
Sbjct: 6   ITKLYESLFIAEEDRAILEMSEETSVDGVEDVDRCLVVKVLSGKKVNREAFKGLIEQIWN 65

Query: 115 KEGRVKIKPKGRNTFLCKFNNSWDKERIRKGGPWNYDKALLAIEDLKGDSRISQAEFRLV 174
             G+V+++  G N F+  F N+ D+ R+   GPW++  +L+ +E   G   IS+  F   
Sbjct: 66  PNGQVEVELVGDNRFMFYFINNEDRNRVWNRGPWHFGNSLIVLEKPVGPGNISKLSFNKA 125

Query: 175 SFWIHVHDLPMVCMCRKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPLKRG 234
            FW+ +HD+P++CM R+ A  L + +G   E+ LE  E  G   +R+ V++DI +PLKR 
Sbjct: 126 DFWVQIHDIPILCMNRRTAKWLAEQIGEVVEIPLESRECWG-KFMRVKVRIDILKPLKRW 185

Query: 235 LMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQSKE 280
           L +K+G     T V + YERLPEFCY CGKIGH   EC + ++++
Sbjct: 186 LRLKLGKCDEITTVGLKYERLPEFCYACGKIGHGIKECFDEEARQ 229

[Close]

BLAST of Spg028501 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-21
Identity = 79/275 (28.73%), Postives = 132/275 (48.00%), Query Frame = 0


Query: 631 ESTKHALWECKMVKRIW---NQYIPL--------TINLF-SLNRGNWNPMEYWTWMMKNL 690
           E+  H L++C   +  W   +  IPL         +NL+   N GN NP     W     
Sbjct: 303 ETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQ----W----- 362

Query: 691 KEEELEQAILILWSLWSYRNTIAQRSSKPDKISMIRAVERSLELREADENSYLNIQHRGN 750
            E+  +    +LW LW  RN +  R  + +   ++R  E  LE    +       +  G 
Sbjct: 363 -EKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLE----EWRIRTEAESCGT 422

Query: 751 RPKLKTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRK 810
           +P++    S GRW PPP    K NTDA+W+   +R GIGW+LR+  G    +G R + + 
Sbjct: 423 KPQVNR-SSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKL 482

Query: 811 WSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINEEDEDISEISFLT 870
            S+   EL+A+   + ++ +  +         +  ESD+  +I+++N  DE    +    
Sbjct: 483 KSVLEAELEAMRWAVLSLSRFQYNY-------VIFESDSQVLIEILN-NDEIWPSLKPTI 542

Query: 871 EEIRRLKNLFVEIHFVFCPRALNAAADRLARAAIS 894
           ++++RL + F E+ FVF PR  N  A+R+AR ++S
Sbjct: 543 QDLQRLLSQFTEVKFVFIPREGNTLAERVARESLS 554

[Close]

BLAST of Spg028501 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-18
Identity = 74/271 (27.31%), Postives = 130/271 (47.97%), Query Frame = 0


Query: 631 ESTKHALWECKMVKRIWNQYIPLTINLFSLNRGNWNPMEYWT--WMMKNLKEEELEQAIL 690
           E+  H L++C   + +W    P+     +   G W    Y    W++ NL+ E  +   +
Sbjct: 20  ETVNHLLFKCCFARLVW-AISPIP----AYPEGEWTDSLYANLYWVL-NLEVEIPKLGKI 79

Query: 691 ------ILWSLWSYRNTIAQRSSKPDKISMIRAVERSLELREADENSYLNIQHRGNRPKL 750
                 +LW LW  RN +  +  + D   ++R      E    + ++   ++ + + P++
Sbjct: 80  GNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFE----EWSTRRELEGKASGPQV 139

Query: 751 KTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIK 810
           +  +S  +W  PP    K NTDA+W  +  R GIGWILR+ SG  + +G R + R  ++ 
Sbjct: 140 ERNLS-VQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVL 199

Query: 811 FLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINEEDEDISEISFLTEEIR 870
             EL+A+   +  + +  +         I  ESDA  ++ L+N  D+    +    E+I+
Sbjct: 200 EAELEALRWAVLTMSRFNYKR-------IIFESDAQALVNLLN-SDDFWPTLQPALEDIQ 259

Query: 871 RLKNLFVEIHFVFCPRALNAAADRLARAAIS 894
           +L + F E+ F F PR  N  ADR+AR +IS
Sbjct: 260 QLLHHFEEVKFEFTPRGGNKVADRIARESIS 271

[Close]

BLAST of Spg028501 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 68.9 bits (167), Expect = 2.4e-11
Identity = 40/194 (20.62%), Postives = 87/194 (44.85%), Query Frame = 0


Query: 87  RDTILCKVLTPKLINPEMFKNFMPKIWNKEGRVKIKPKGRNTFLCKFNNSWDKERIRKGG 146
           R ++L ++L P+  + E     +P  W    +V  +      F  +F +  D     +  
Sbjct: 36  RLSLLGRILNPQTQSVERAILELPYQWGLGTQVHGRILDDRCFQVRFRSEIDLLNGLRRA 95

Query: 147 PWNYDKALLAIEDLKGDSRISQAEFRLVSFWIHVHDLPMVCMCRKWATALGDSLGSFQEV 206
           PW +++  +A++  + +   ++     +  W+H+  +P+  +  +    +  +LG    +
Sbjct: 96  PWVFNEWFIALQ--RWEDFPTEDFLTFIDVWVHIRGIPLPYVSERTVEIIASTLGEVVAM 155

Query: 207 DLEEEENNGDNTLRILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIG 266
           D  EE  +    +R+ V++D T+PL+    V+  S+     +   YE+L   C +C ++ 
Sbjct: 156 DFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASR-ERAMIGFEYEKLQRVCTNCCRVN 215

Query: 267 HVKSECEEPQSKEE 281
           H  S C     +EE
Sbjct: 216 HQVSHCPYVVHQEE 226

[Close]

BLAST of Spg028501 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 2.7e-10
Identity = 55/208 (26.44%), Postives = 92/208 (44.23%), Query Frame = 0


Query: 689 ILWSLWSYRNTIAQRSSKPDKISMIRAVERSL-ELREADENSYLNIQHRGNR---PKLKT 748
           ++W +W   N +    +   +      VE +L + +E  +N+  N Q  GNR   P   T
Sbjct: 47  LMWRIWKSGNDLVFNHT---RTKFQTTVEMALNDTKEWLDNTMTNEQQNGNRNADPSRNT 106

Query: 749 LMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFL 808
                +W+PP  +  K N DAS  ++    G+GWILR+S G+ I  G  +   + + +  
Sbjct: 107 -----KWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEA 166

Query: 809 ELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINEEDEDISEISFLTEEIRRL 868
           E   ++  +    Q  +G G +    +  E D   I ++IN +  +   +    + I+  
Sbjct: 167 ECSTLIWAI----QASYGFGHK---KVIFEGDNQTITRMINTKSSN-PRLQHFLDTIQSW 226

Query: 869 KNLFVEIHFVFCPRALNAAADRLARAAI 893
              F  I F F  R  N  AD LA+ AI
Sbjct: 227 IPSFESIEFSFKHREQNGCADFLAKQAI 238

[Close]

BLAST of Spg028501 vs. TAIR 10
Match: AT3G23320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 5.2e-06
Identity = 41/178 (23.03%), Postives = 80/178 (44.94%), Query Frame = 0


Query: 726 DENSYLNIQHRG--NRPKLKTLMSH-GRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRD 785
           D   +L+++H+   N    +T  S   +W  P     K N D S    +Q  G+ WI+R+
Sbjct: 2   DTKEWLDVKHKNDDNVKGGQTKSSRTDKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRN 61

Query: 786 SSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIK 845
           S G+ ++ G  +   + +IK  E  A++  ++    + +         +  E D + + +
Sbjct: 62  SQGTCLDCGCGKFQGRQTIKEAECTALIWAIQCAWDLGYRR-------VEFEGDNITVNR 121

Query: 846 LINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAISPPLNSVL 901
           LI  ++ +   + +  E I++    F  + F F  R  N   D LA+ A++  +N  L
Sbjct: 122 LIRNKETN-PRLRYYLEFIQQWSKAFTTVKFTFRHREQNVCVDVLAKKAVANHINHTL 171

The following BLAST results are available for this feature:

BLAST of Spg028501 vs. NCBI nr


Match Name	E-value	Identity	Description
TXG68535.1	1.1e-39	38.70	hypothetical protein EZV62_003470 [Acer yangbiense]	[more]
TXG48193.1	3.1e-37	34.05	hypothetical protein EZV62_027487 [Acer yangbiense]	[more]
TXG54013.1	5.3e-37	34.12	hypothetical protein EZV62_019269 [Acer yangbiense]	[more]
TXG48504.1	9.1e-37	38.00	hypothetical protein EZV62_024379 [Acer yangbiense]	[more]
TXG57113.1	9.1e-37	36.00	hypothetical protein EZV62_018426 [Acer yangbiense]	[more]

BLAST of Spg028501 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg028501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7IHI0	5.5e-40	38.70	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00347...	[more]
A0A5C7GU64	1.5e-37	34.05	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02748...	[more]
A0A5C7H9Y2	2.6e-37	34.12	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926...	[more]
A0A5C7GUN2	4.4e-37	38.00	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02437...	[more]
A0A5C7HJ97	4.4e-37	36.00	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01842...	[more]

BLAST of Spg028501 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	1.1e-21	28.73	Ribonuclease H-like superfamily protein	[more]
AT2G34320.1	1.2e-18	27.31	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G36228.1	2.4e-11	20.62	nucleic acid binding;zinc ion binding	[more]
AT5G65005.1	2.7e-10	26.44	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G23320.1	5.2e-06	23.03	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 41..64
None	No IPR available	COILS	Coil	Coil	coord: 471..491
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..467
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..318
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..375
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 392..453
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 77..468
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 758..895 e-value: 9.5E-15 score: 56.7
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 762..891 e-value: 1.9E-17 score: 63.2
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 80..223 e-value: 1.3E-26 score: 92.9
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 225..273 e-value: 2.3E-14 score: 52.8
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 77..468
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 259..274 score: 10.13072
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 761..883 e-value: 1.10867E-18 score: 80.8212
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 528..575
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 757..894

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028501.1	Spg028501.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0008270	zinc ion binding