Spg028461 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028461
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	stress-induced protein KIN2-like
Location	scaffold7: 16663682 .. 16664417 (+)
RNA-Seq Expression	Spg028461
Synteny	Spg028461

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTATCGCCAAAAATTCTTTCAAGTTTCAGCTCTTTCTTCGTTTTTCTAAATTTCTACAAAAGAAAATGGCAGACAACTCTCAACAAATGAGCTACAACATTGGAGAAGCCAAAGGCCAAGCAGAGGTTCACTTTGCCGCTACTAATTATATTTAGCCATGCCCTTATTTTATTAAATGGGTCATGCTTTACATATAGCTTGTGATATAAGTGGTATAATTCCAATGTTATTTTTAATCGGGGTAGTCTTGTTGAAAAATGTTCCATATTTATTTTGCCTTTAAGGATTAAGAAGTGATTGGTAACATATTGATTTGTGTGATTATATAGGAGAAGGCGAGCAATATAATGGACAAAGCAAGTGATGCAGCCCAATCAACTAAAGAGTCAATACAAGAGGCAGGACAACAGATAAAGTCTAAGGCACAGGGTGCAGCTGATGCTGTTAAGGATGCCACTGGCATGAACAAATGAAGTTTTTCCATTTCTCAATTTTTGTGTTTTTCTCCGAATGGCTTTCTTTATTTTTGTTTTTTTTTTCCTCTTATGCTAAATCTCCCATGTATCATGCTTTATTTTCCTTTTGTGTGGAAAAACAAAAATAAGAAATAAAGCTTTAATGTTGCTCTTATATGAATTAGAACTAATGAATATAGTGCCACAATATTATGCCTCTCCTTCTATCACTAAAAATTGAAATTATATAAATAGCAGATGAAAATGTCGAAATGAG

mRNA sequence

ATGGCAGACAACTCTCAACAAATGAGCTACAACATTGGAGAAGCCAAAGGCCAAGCAGAGGAGAAGGCGAGCAATATAATGGACAAAGCAAGTGATGCAGCCCAATCAACTAAAGAGTCAATACAAGAGGCAGGACAACAGATAAAGTCTAAGGCACAGGGTGCAGCTGATGCTGTTAAGGATGCCACTGGCATGAACAAATGA

Coding sequence (CDS)

ATGGCAGACAACTCTCAACAAATGAGCTACAACATTGGAGAAGCCAAAGGCCAAGCAGAGGAGAAGGCGAGCAATATAATGGACAAAGCAAGTGATGCAGCCCAATCAACTAAAGAGTCAATACAAGAGGCAGGACAACAGATAAAGTCTAAGGCACAGGGTGCAGCTGATGCTGTTAAGGATGCCACTGGCATGAACAAATGA

Protein sequence

MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVKDATGMNK

Homology

[Close]

BLAST of Spg028461 vs. NCBI nr
Match: XP_022159706.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 108.6 bits (270), Expect = 2.1e-20
Identity = 58/67 (86.57%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVK 60
          MADNSQ+MSY+ GEAKGQA+EKASN+MDKASDAAQS KES+QEAGQQ+K+KAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg028461 vs. NCBI nr
Match: XP_008437025.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 6.1e-20
Identity = 57/67 (85.07%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVK 60
          MADNSQ+MSY++GEAKGQA+EKASN+MDKASD AQS KES+QEAGQQ+K+KAQGAADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg028461 vs. NCBI nr
Match: XP_022159716.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 106.3 bits (264), Expect = 1.0e-19
Identity = 57/67 (85.07%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVK 60
          MADNSQ+MSY+ GEAKGQA+EKASN+MDKASDAAQS KES+QEAGQQ+K+KAQG ADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg028461 vs. NCBI nr
Match: XP_004152386.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein Csa_000676 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 1.0e-19
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVK 60
          MADNSQ MSY IGEAKGQA+EKASN+M+KASDAAQS KESIQE GQQ+K+KAQGAADAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg028461 vs. NCBI nr
Match: XP_022134237.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19
Identity = 56/67 (83.58%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVK 60
          MADNSQ+M+YN GEAKG+A+EKASN+MDKASD AQS KES+QEAGQQ+K+KAQGAADAVK
Sbjct: 1  MADNSQKMAYNAGEAKGEAQEKASNLMDKASDTAQSAKESMQEAGQQLKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg028461 vs. ExPASy Swiss-Prot
Match: P31169 (Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.4e-05
Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 9  SYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVKDATGMNK 68
          ++  G+A G+AEEK++ ++DKA DAA +   S Q+AG+ I   A G  + VKD TG+NK
Sbjct: 8  AFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTGLNK 66

[Close]

BLAST of Spg028461 vs. ExPASy Swiss-Prot
Match: P18612 (Stress-induced protein KIN1 OS=Arabidopsis thaliana OX=3702 GN=KIN1 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 3.7e-04
Identity = 24/59 (40.68%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 9  SYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVKDATGMNK 68
          ++  G+  G+AEEK++ ++DKA DAA       Q+AG+ +   A G  + VKD TG+NK
Sbjct: 8  AFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVKDKTGLNK 66

[Close]

BLAST of Spg028461 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20
Identity = 58/67 (86.57%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVK 60
          MADNSQ+MSY+ GEAKGQA+EKASN+MDKASDAAQS KES+QEAGQQ+K+KAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg028461 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.0e-20
Identity = 57/67 (85.07%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVK 60
          MADNSQ+MSY++GEAKGQA+EKASN+MDKASD AQS KES+QEAGQQ+K+KAQGAADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg028461 vs. ExPASy TrEMBL
Match: A0A1S3ASP1 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.0e-20
Identity = 57/67 (85.07%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVK 60
          MADNSQ+MSY++GEAKGQA+EKASN+MDKASD AQS KES+QEAGQQ+K+KAQGAADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg028461 vs. ExPASy TrEMBL
Match: A0A0A0KPD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165870 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.0e-20
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVK 60
          MADNSQ MSY IGEAKGQA+EKASN+M+KASDAAQS KESIQE GQQ+K+KAQGAADAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg028461 vs. ExPASy TrEMBL
Match: A0A6J1E4S0 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.0e-20
Identity = 57/67 (85.07%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVK 60
          MADNSQ+MSY+ GEAKGQA+EKASN+MDKASDAAQS KES+QEAGQQ+K+KAQG ADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Spg028461 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 86.3 bits (212), Expect = 1.0e-17
Identity = 44/67 (65.67%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1  MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVK 60
          M++NSQ MS+N G+AKGQ +EKASN++DKAS+AAQS KESIQE GQQ+K KAQGA++ +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DATGMNK 68
          + TG++K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of Spg028461 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 84.7 bits (208), Expect = 3.0e-17
Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 1  MADNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVK 60
          M+ NSQ +S+  G+AKGQ +EKAS +MDKAS+AAQS KES++E GQQIK KAQGA ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DATGMNK 68
          +ATGMNK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of Spg028461 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 77.0 bits (188), Expect = 6.3e-15
Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 3  DNSQQMSYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVKDA 62
          DN Q  SY  G+A GQ +EKA  +MDKA DAA S ++S+Q+ GQQ+K KAQGAAD VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 TGMNK 68
          TGMNK
Sbjct: 62 TGMNK 66

[Close]

BLAST of Spg028461 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) )

HSP 1 Score: 48.5 bits (114), Expect = 2.4e-06
Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 9  SYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVKDATGMNK 68
          ++  G+A G+AEEK++ ++DKA DAA +   S Q+AG+ I   A G  + VKD TG+NK
Sbjct: 8  AFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTGLNK 66

[Close]

BLAST of Spg028461 vs. TAIR 10
Match: AT5G15960.1 (stress-responsive protein (KIN1) / stress-induced protein (KIN1) )

HSP 1 Score: 45.1 bits (105), Expect = 2.7e-05
Identity = 24/59 (40.68%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 9  SYNIGEAKGQAEEKASNIMDKASDAAQSTKESIQEAGQQIKSKAQGAADAVKDATGMNK 68
          ++  G+  G+AEEK++ ++DKA DAA       Q+AG+ +   A G  + VKD TG+NK
Sbjct: 8  AFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVKDKTGLNK 66

The following BLAST results are available for this feature:

BLAST of Spg028461 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159706.1	2.1e-20	86.57	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_008437025.1	6.1e-20	85.07	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-...	[more]
XP_022159716.1	1.0e-19	85.07	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_004152386.1	1.0e-19	86.57	stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein C...	[more]
XP_022134237.1	1.4e-19	83.58	stress-induced protein KIN2-like [Momordica charantia]	[more]

BLAST of Spg028461 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31169	3.4e-05	45.76	Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1	[more]
P18612	3.7e-04	40.68	Stress-induced protein KIN1 OS=Arabidopsis thaliana OX=3702 GN=KIN1 PE=2 SV=1	[more]

BLAST of Spg028461 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4Q8	1.0e-20	86.57	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 ...	[more]
A0A5A7TJP0	3.0e-20	85.07	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3ASP1	3.0e-20	85.07	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV...	[more]
A0A0A0KPD4	5.0e-20	86.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165870 PE=4 SV=1	[more]
A0A6J1E4S0	5.0e-20	85.07	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 ...	[more]

BLAST of Spg028461 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53820.1	1.0e-17	65.67	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G38760.1	3.0e-17	67.16	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	6.3e-15	63.08	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G15970.1	2.4e-06	45.76	stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsi...	[more]
AT5G15960.1	2.7e-05	40.68	stress-responsive protein (KIN1) / stress-induced protein (KIN1)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	GENE3D	1.20.120.20	Apolipoprotein	coord: 2..65 e-value: 5.2E-7 score: 31.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..49
None	No IPR available	PANTHER	PTHR34191:SF15	BNAA01G32930D PROTEIN	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028461.1	Spg028461.1	mRNA