Spg028452 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg028452
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOB domain-containing protein
Locationscaffold7: 11260556 .. 11261671 (+)
RNA-Seq ExpressionSpg028452
SyntenySpg028452
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTATTTGTGACGGTGTATGTAGAGAGAGATTCGACGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAATATTATTCCTCCACAGCAAGTTATGGGGAGGCGACACACGCTGCAGGGTCCTCCTGGGACTCTCAACACCATTACTCCATGTGCAGCCTGCAAGCTCTTGAGAAGAAGATGTGCTCAAGAATGCCCCTTCTCCCCTTACTTCTCCCCCCATGAGCCCCACAAGTTCGCCTCCGTCCACAAGGTCTTCGGCGCCAGCAACGTCTCCAAGATGCTCATGGTAACGCGATGAAAACTAGTTAAATTTATTACAAGTTTGATCCTTGAACTTTCGGAGCTGTTGTGTTTATTTTAGTGTCTAAAAAGGTCTCTGTAGTTAACATTATTGTTCGTTTAACGTGCTTATCTGACACGTTGACTGTAGTTAACATTTTAATAGACAAAATCCTAAAAGTTCAAAGGTCTATTAGAAGTTTTTTAAAGTATATAAAGACTAAAATAGACACAACTCTGAAAGTTCTGGGACTAGACTTTTAATTAATTAACGAGAAAATTAAATCCCTAGAATGAAATATTTATGTAACGAGAGATTTTTGCAGGAAGTTCCCGAGAATCAGAGAGCCGATGCTGCGAACAGCCTAGTTTATGAAGCTAATGTGAGGCTGAGAGATCCTGTCTATGGCTGCATGGGAGCCATTTCAGCTCTACAACACCAAATCCAAGCTTTACAAGCTGAGCTCAATGCAGTTAGAGCTGAGATATTGAGATACAAATATAGAGAAGCTAATATGATTCACTCTTCTCCTCAGCAACATGTGCCTTTTCTTTCTTCTTCAGCCGAGGTCGTTTCGGTCGCCGTACCGCCGCCACCACCACCTCCGCCGCTACCTCCACCGTCACATCAGGATGCTTCTTCCTCTTCCTCGTCGTTGTACAACCGGCCCGCGGCAGCTGCTGATTTTAGTACCATTTCAAGTGATGAAAATGTTACCTATTTTGTTAGTACTTCTACTGCTCATCAATTGAATTCTTAGCTTTGTAGAATAGGGTTTTAAGAGAAAGGCAATTTTACATGGAATAAGATTGGAAATTTGGA

mRNA sequence

ATGATTATTTGTGACGGTGTATGTAGAGAGAGATTCGACGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAATATTATTCCTCCACAGCAAGTTATGGGGAGGCGACACACGCTGCAGGGTCCTCCTGGGACTCTCAACACCATTACTCCATGTGCAGCCTGCAAGCTCTTGAGAAGAAGATGTGCTCAAGAATGCCCCTTCTCCCCTTACTTCTCCCCCCATGAGCCCCACAAGTTCGCCTCCGTCCACAAGGTCTTCGGCGCCAGCAACGTCTCCAAGATGCTCATGGAAGTTCCCGAGAATCAGAGAGCCGATGCTGCGAACAGCCTAGTTTATGAAGCTAATGTGAGGCTGAGAGATCCTGTCTATGGCTGCATGGGAGCCATTTCAGCTCTACAACACCAAATCCAAGCTTTACAAGCTGAGCTCAATGCAGTTAGAGCTGAGATATTGAGATACAAATATAGAGAAGCTAATATGATTCACTCTTCTCCTCAGCAACATGTGCCTTTTCTTTCTTCTTCAGCCGAGGTCGTTTCGGTCGCCGTACCGCCGCCACCACCACCTCCGCCGCTACCTCCACCGTCACATCAGGATGCTTCTTCCTCTTCCTCGTCGTTGTACAACCGGCCCGCGGCAGCTGCTGATTTTAGTACCATTTCAAGTGATGAAAATGTTACCTATTTTGTTAGTACTTCTACTGCTCATCAATTGAATTCTTAG

Coding sequence (CDS)

ATGATTATTTGTGACGGTGTATGTAGAGAGAGATTCGACGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAATATTATTCCTCCACAGCAAGTTATGGGGAGGCGACACACGCTGCAGGGTCCTCCTGGGACTCTCAACACCATTACTCCATGTGCAGCCTGCAAGCTCTTGAGAAGAAGATGTGCTCAAGAATGCCCCTTCTCCCCTTACTTCTCCCCCCATGAGCCCCACAAGTTCGCCTCCGTCCACAAGGTCTTCGGCGCCAGCAACGTCTCCAAGATGCTCATGGAAGTTCCCGAGAATCAGAGAGCCGATGCTGCGAACAGCCTAGTTTATGAAGCTAATGTGAGGCTGAGAGATCCTGTCTATGGCTGCATGGGAGCCATTTCAGCTCTACAACACCAAATCCAAGCTTTACAAGCTGAGCTCAATGCAGTTAGAGCTGAGATATTGAGATACAAATATAGAGAAGCTAATATGATTCACTCTTCTCCTCAGCAACATGTGCCTTTTCTTTCTTCTTCAGCCGAGGTCGTTTCGGTCGCCGTACCGCCGCCACCACCACCTCCGCCGCTACCTCCACCGTCACATCAGGATGCTTCTTCCTCTTCCTCGTCGTTGTACAACCGGCCCGCGGCAGCTGCTGATTTTAGTACCATTTCAAGTGATGAAAATGTTACCTATTTTGTTAGTACTTCTACTGCTCATCAATTGAATTCTTAG

Protein sequence

MIICDGVCRERFDEIAKKIKRETDVSSNIIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRYKYREANMIHSSPQQHVPFLSSSAEVVSVAVPPPPPPPPLPPPSHQDASSSSSSLYNRPAAAADFSTISSDENVTYFVSTSTAHQLNS
Homology
BLAST of Spg028452 vs. NCBI nr
Match: XP_038893087.1 (LOB domain-containing protein 15 [Benincasa hispida])

HSP 1 Score: 402.1 bits (1032), Expect = 3.3e-108
Identity = 217/241 (90.04%), Postives = 224/241 (92.95%), Query Frame = 0

Query: 9   RERFDEIAKKIKRETDVSSNIIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQE 68
           RERFDEIAKKIKRETDVSS+ IPPQQ+MGRRH+LQGPPG LNTITPCAACKLLRRRCAQE
Sbjct: 5   RERFDEIAKKIKRETDVSSS-IPPQQIMGRRHSLQGPPGALNTITPCAACKLLRRRCAQE 64

Query: 69  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYG 128
           CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV ENQRADAANSLVYEANVRLRDPVYG
Sbjct: 65  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDPVYG 124

Query: 129 CMGAISALQHQIQALQAELNAVRAEILRYKYREA-NMIHSSP-QQHVPFLSSSAEVVSVA 188
           CMGAISALQHQIQALQAELNAVRAEILR+K REA NMIHSSP QQH+PFLSSS EVVSVA
Sbjct: 125 CMGAISALQHQIQALQAELNAVRAEILRHKLREANNMIHSSPQQQHLPFLSSSTEVVSVA 184

Query: 189 VPPPPPPPPLPPPSHQDASSSSSSLYNRP--AAAADFSTISSDENVTYFVST-STAHQLN 245
           VPPPPPPPPLPPP H D  SSSSSLYNRP  AA AD+STISSDEN+ YFVST ST HQLN
Sbjct: 185 VPPPPPPPPLPPPPHHDV-SSSSSLYNRPAVAATADYSTISSDENIAYFVSTSSTTHQLN 243

BLAST of Spg028452 vs. NCBI nr
Match: XP_004146476.1 (LOB domain-containing protein 15 [Cucumis sativus] >KGN50723.1 hypothetical protein Csa_005835 [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 1.7e-107
Identity = 216/242 (89.26%), Postives = 227/242 (93.80%), Query Frame = 0

Query: 9   RERFDEIAKKIKRETDVSSNIIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQE 68
           RERFDEIAKKIKRETDVSSN IPPQQ+MGRRH+LQGPPG LNTITPCAACKLLRRRCAQE
Sbjct: 5   RERFDEIAKKIKRETDVSSN-IPPQQIMGRRHSLQGPPGALNTITPCAACKLLRRRCAQE 64

Query: 69  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYG 128
           CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV +NQRADAANSLVYEANVRLRDPVYG
Sbjct: 65  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSDNQRADAANSLVYEANVRLRDPVYG 124

Query: 129 CMGAISALQHQIQALQAELNAVRAEILRYKYREA-NMIHSSP-QQHVPFLSSSAE-VVSV 188
           CMGAISALQHQIQ+LQAELNAVRAEILR+K+REA N+IHSSP QQHVPFLSSS+  VVSV
Sbjct: 125 CMGAISALQHQIQSLQAELNAVRAEILRHKFREANNIIHSSPQQQHVPFLSSSSTVVVSV 184

Query: 189 AVPPPPPPPPLPPPSHQDASSSSSSLYNR--PAAAADFSTISSDENVTYFVST-STAHQL 245
           A+PPPPPPPPLPPP H DASSSSSSLYNR   AAAAD+STISS+ENVTYFV T ST HQL
Sbjct: 185 ALPPPPPPPPLPPPHHHDASSSSSSLYNRRTVAAAADYSTISSNENVTYFVGTSSTGHQL 244

BLAST of Spg028452 vs. NCBI nr
Match: XP_008456927.1 (PREDICTED: LOB domain-containing protein 15 [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 1.1e-106
Identity = 214/241 (88.80%), Postives = 224/241 (92.95%), Query Frame = 0

Query: 9   RERFDEIAKKIKRETDVSSNIIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQE 68
           RERFDEIAKKIKRETDVSSN IPPQQ+MGRRH+LQG PG LNTITPCAACKLLRRRCAQE
Sbjct: 5   RERFDEIAKKIKRETDVSSN-IPPQQIMGRRHSLQGSPGALNTITPCAACKLLRRRCAQE 64

Query: 69  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYG 128
           CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV ENQRADAANSLVYEANVRLRDPVYG
Sbjct: 65  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDPVYG 124

Query: 129 CMGAISALQHQIQALQAELNAVRAEILRYKYREA-NMIHSSP-QQHVPFLSSSAEVVSVA 188
           CMGAISALQHQIQ+LQAELNAVRAEILR+K+REA NMIHSSP QQHVPFLSSS+    V+
Sbjct: 125 CMGAISALQHQIQSLQAELNAVRAEILRHKFREANNMIHSSPQQQHVPFLSSSSSTEVVS 184

Query: 189 VPPPPPPPPLPPPSHQDASSSSSSLYNRP--AAAADFSTISSDENVTYFVSTSTA-HQLN 245
           V  PPPPPPLPPP H DASSSSSSLYNRP  AAAAD+STISSDENVTYFVSTS++ HQLN
Sbjct: 185 VALPPPPPPLPPPHHHDASSSSSSLYNRPTVAAAADYSTISSDENVTYFVSTSSSGHQLN 244

BLAST of Spg028452 vs. NCBI nr
Match: XP_023544729.1 (LOB domain-containing protein 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.4 bits (1017), Expect = 1.8e-106
Identity = 213/242 (88.02%), Postives = 221/242 (91.32%), Query Frame = 0

Query: 9   RERFDEIAKKIKRETDVSSNIIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQE 68
           RERFDEIAKKIKRETDVSSN IPPQQ+MGRRH+LQ  PG LNTITPCAACKLLRRRCAQE
Sbjct: 5   RERFDEIAKKIKRETDVSSN-IPPQQIMGRRHSLQASPGILNTITPCAACKLLRRRCAQE 64

Query: 69  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYG 128
           CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV ENQRADAANSLVYEANVRLRDPVYG
Sbjct: 65  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDPVYG 124

Query: 129 CMGAISALQHQIQALQAELNAVRAEILRYKYREA-NMIHSSP----QQHVPFLSSSAEVV 188
           CMGAIS+LQHQIQALQ ELNAVRAEILR+K+REA NMIHSSP    QQHV FLSSSAEVV
Sbjct: 125 CMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSAEVV 184

Query: 189 SVAVPPPPPPPPLPPPSHQDASSSSSSLYNRPAAAADFSTISSDENVTYFVS-TSTAHQL 245
           SVAVPPPPP  PLPPPSH DASSSSS LYNRP  A D++TISS+ENVTYFVS TST HQL
Sbjct: 185 SVAVPPPPPSLPLPPPSHHDASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTDHQL 244

BLAST of Spg028452 vs. NCBI nr
Match: KAG7031522.1 (LOB domain-containing protein 15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394.4 bits (1012), Expect = 7.0e-106
Identity = 211/242 (87.19%), Postives = 220/242 (90.91%), Query Frame = 0

Query: 9   RERFDEIAKKIKRETDVSSNIIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQE 68
           RERFDEIAKKIKRETDVSSN IPPQQ+MGRRH+LQ  PG LNTITPCAACKLLRRRCAQE
Sbjct: 5   RERFDEIAKKIKRETDVSSN-IPPQQIMGRRHSLQASPGILNTITPCAACKLLRRRCAQE 64

Query: 69  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYG 128
           CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV ENQRADAANSLVYEANVRLRDPVYG
Sbjct: 65  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDPVYG 124

Query: 129 CMGAISALQHQIQALQAELNAVRAEILRYKYREA-NMIHSSP----QQHVPFLSSSAEVV 188
           CMGAIS+LQHQIQALQ ELNAVRAEILR+K+REA NMIHSSP    QQH  FLSSSAEVV
Sbjct: 125 CMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHASFLSSSAEVV 184

Query: 189 SVAVPPPPPPPPLPPPSHQDASSSSSSLYNRPAAAADFSTISSDENVTYFVSTSTA-HQL 245
           SVAVPPPPP  PLPPPSH DASSSSS LYNRP  A D++TISS+ENVTYFVST+T  HQL
Sbjct: 185 SVAVPPPPPSLPLPPPSHHDASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTTTDHQL 244

BLAST of Spg028452 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 266.2 bits (679), Expect = 3.8e-70
Identity = 150/224 (66.96%), Postives = 167/224 (74.55%), Query Frame = 0

Query: 9   RERFDEIAKKIKRETDVSSNIIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQE 68
           RERF+EI KKIKRE D       P Q+ G R  + GPPGTLNTITPCAACKLLRRRCAQE
Sbjct: 5   RERFEEIGKKIKREADAW-----PHQMAGIRRPMSGPPGTLNTITPCAACKLLRRRCAQE 64

Query: 69  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYG 128
           CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPE+QRADAANSLVYEANVRLRDPVYG
Sbjct: 65  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYG 124

Query: 129 CMGAISALQHQIQALQAELNAVRAEILRYKYRE--ANMIHSSPQQHVPFLSSSAEVVSVA 188
           CMGAISALQ Q+QALQAEL AVR+EIL+YK RE  A +I  S  Q   F +S    VSV 
Sbjct: 125 CMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPSNSQVAGFHNSGG--VSVI 184

Query: 189 VPPPPPPPPLPPPSHQDASSSSSSLYNRPAAA-ADFSTISSDEN 230
            PPP  P   P P+     S SS ++++P     ++  I S+ N
Sbjct: 185 APPPQRPTTPPQPTTAHPPSPSSCVFSQPTTRDLEYGNIESENN 221

BLAST of Spg028452 vs. ExPASy Swiss-Prot
Match: Q9AT61 (LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 SV=2)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-61
Identity = 144/263 (54.75%), Postives = 172/263 (65.40%), Query Frame = 0

Query: 9   RERFDEIAKKIKR-ETDVSSNIIPPQQVMGRRHTLQGPPG-TLNTITPCAACKLLRRRCA 68
           RE F E  + +K+ + D +        VMG R  +  PPG TLNT+TPCAACKLLRRRCA
Sbjct: 5   REGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLLRRRCA 64

Query: 69  QECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPV 128
           +ECPFSPYFSPHEPHKFA+VHKVFGASNVSKML+EV E+QR DAANSLVYEAN+RLRDP+
Sbjct: 65  EECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPI 124

Query: 129 YGCMGAISALQHQIQALQAELNAVRAEILRYKYREANMIHSSPQQHVPFLSSS------- 188
           YGCMGAISALQH IQ+LQ+EL  VR EILR+KY+EA  I S         ++S       
Sbjct: 125 YGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSVSCDQH 184

Query: 189 AEVVSVAVPPPPPPPP---------------------LPPPSHQDASSSSS------SLY 234
           A   ++ +PPPPPPPP                     LP PS   +SSSSS      S+Y
Sbjct: 185 ALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNSSATNSMY 244

BLAST of Spg028452 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37
Identity = 78/127 (61.42%), Postives = 97/127 (76.38%), Query Frame = 0

Query: 44  GPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVP 103
           G PG+    +PCA+CKLLRRRCA++C F+PYF P +PHKFA VHKVFGASNVSKML E+P
Sbjct: 2   GGPGS----SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELP 61

Query: 104 ENQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRYKYREAN 163
            +QRADA NSLV+EAN R+RDPVYGC+GAIS LQ+Q+  LQ +L   +AEIL  + +   
Sbjct: 62  VHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEP 121

Query: 164 MIHSSPQ 171
            + S  Q
Sbjct: 122 TLQSHHQ 124

BLAST of Spg028452 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.5e-37
Identity = 72/110 (65.45%), Postives = 91/110 (82.73%), Query Frame = 0

Query: 53  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAAN 112
           +PCAACKLLRRRCAQ+C FSPYF   EP KFA+VH+VFGASNV+KML E+P +QR DA +
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 113 SLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRYKYREA 163
           S+VYEAN R+RDPVYGC+GAIS+LQ QI  LQA+L   +AE++  + R++
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

BLAST of Spg028452 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-34
Identity = 66/109 (60.55%), Postives = 88/109 (80.73%), Query Frame = 0

Query: 50  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRAD 109
           +T +PCAACK LRR+C  EC F+PYF P +P KFA+VHKVFGASNV+K+L E+  +QR D
Sbjct: 5   STNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64

Query: 110 AANSLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRYK 159
           A NSL YEA++RLRDPVYGC+G IS LQHQ++ LQ +L+  ++E+ +Y+
Sbjct: 65  AVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQ 113

BLAST of Spg028452 vs. ExPASy TrEMBL
Match: A0A0A0KM94 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G219380 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 8.0e-108
Identity = 216/242 (89.26%), Postives = 227/242 (93.80%), Query Frame = 0

Query: 9   RERFDEIAKKIKRETDVSSNIIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQE 68
           RERFDEIAKKIKRETDVSSN IPPQQ+MGRRH+LQGPPG LNTITPCAACKLLRRRCAQE
Sbjct: 5   RERFDEIAKKIKRETDVSSN-IPPQQIMGRRHSLQGPPGALNTITPCAACKLLRRRCAQE 64

Query: 69  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYG 128
           CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV +NQRADAANSLVYEANVRLRDPVYG
Sbjct: 65  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSDNQRADAANSLVYEANVRLRDPVYG 124

Query: 129 CMGAISALQHQIQALQAELNAVRAEILRYKYREA-NMIHSSP-QQHVPFLSSSAE-VVSV 188
           CMGAISALQHQIQ+LQAELNAVRAEILR+K+REA N+IHSSP QQHVPFLSSS+  VVSV
Sbjct: 125 CMGAISALQHQIQSLQAELNAVRAEILRHKFREANNIIHSSPQQQHVPFLSSSSTVVVSV 184

Query: 189 AVPPPPPPPPLPPPSHQDASSSSSSLYNR--PAAAADFSTISSDENVTYFVST-STAHQL 245
           A+PPPPPPPPLPPP H DASSSSSSLYNR   AAAAD+STISS+ENVTYFV T ST HQL
Sbjct: 185 ALPPPPPPPPLPPPHHHDASSSSSSLYNRRTVAAAADYSTISSNENVTYFVGTSSTGHQL 244

BLAST of Spg028452 vs. ExPASy TrEMBL
Match: A0A1S3C502 (LOB domain-containing protein 15 OS=Cucumis melo OX=3656 GN=LOC103496729 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.2e-107
Identity = 214/241 (88.80%), Postives = 224/241 (92.95%), Query Frame = 0

Query: 9   RERFDEIAKKIKRETDVSSNIIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQE 68
           RERFDEIAKKIKRETDVSSN IPPQQ+MGRRH+LQG PG LNTITPCAACKLLRRRCAQE
Sbjct: 5   RERFDEIAKKIKRETDVSSN-IPPQQIMGRRHSLQGSPGALNTITPCAACKLLRRRCAQE 64

Query: 69  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYG 128
           CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV ENQRADAANSLVYEANVRLRDPVYG
Sbjct: 65  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDPVYG 124

Query: 129 CMGAISALQHQIQALQAELNAVRAEILRYKYREA-NMIHSSP-QQHVPFLSSSAEVVSVA 188
           CMGAISALQHQIQ+LQAELNAVRAEILR+K+REA NMIHSSP QQHVPFLSSS+    V+
Sbjct: 125 CMGAISALQHQIQSLQAELNAVRAEILRHKFREANNMIHSSPQQQHVPFLSSSSSTEVVS 184

Query: 189 VPPPPPPPPLPPPSHQDASSSSSSLYNRP--AAAADFSTISSDENVTYFVSTSTA-HQLN 245
           V  PPPPPPLPPP H DASSSSSSLYNRP  AAAAD+STISSDENVTYFVSTS++ HQLN
Sbjct: 185 VALPPPPPPLPPPHHHDASSSSSSLYNRPTVAAAADYSTISSDENVTYFVSTSSSGHQLN 244

BLAST of Spg028452 vs. ExPASy TrEMBL
Match: A0A6J1FVC7 (LOB domain-containing protein 15-like OS=Cucurbita moschata OX=3662 GN=LOC111447627 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.2e-105
Identity = 210/242 (86.78%), Postives = 219/242 (90.50%), Query Frame = 0

Query: 9   RERFDEIAKKIKRETDVSSNIIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQE 68
           RERFDEIAKKIKRETDVSSN IPPQQ+MGRRH+LQ  PG LNTITPCAACKLLRRRCAQE
Sbjct: 5   RERFDEIAKKIKRETDVSSN-IPPQQIMGRRHSLQASPGILNTITPCAACKLLRRRCAQE 64

Query: 69  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYG 128
           CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV EN+RADAANSLVYEANVRLRDPVYG
Sbjct: 65  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENRRADAANSLVYEANVRLRDPVYG 124

Query: 129 CMGAISALQHQIQALQAELNAVRAEILRYKYREA-NMIHSSP----QQHVPFLSSSAEVV 188
           CMGAIS+LQHQIQALQ ELN VRAEILR+K+REA NMIHSSP    QQH  FLSSSAEVV
Sbjct: 125 CMGAISSLQHQIQALQIELNTVRAEILRHKFREASNMIHSSPQPQQQQHASFLSSSAEVV 184

Query: 189 SVAVPPPPPPPPLPPPSHQDASSSSSSLYNRPAAAADFSTISSDENVTYFVS-TSTAHQL 245
           SVAVPPPPP  PLPPPSH DASSSSS LYNRP  A D++TISS+ENVTYFVS TST HQL
Sbjct: 185 SVAVPPPPPSLPLPPPSHHDASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTDHQL 244

BLAST of Spg028452 vs. ExPASy TrEMBL
Match: A0A6J1D0I7 (LOB domain-containing protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015933 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.3e-102
Identity = 210/241 (87.14%), Postives = 216/241 (89.63%), Query Frame = 0

Query: 9   RERFDEIAKKIKRETDVSSNIIP-PQQVMGRRH-TLQGPPGTLNTITPCAACKLLRRRCA 68
           RERFDEIAKKIKRETDVSS+    P Q+MGRR  TLQ PPGTLNTITPCAACKLLRRRC 
Sbjct: 5   RERFDEIAKKIKRETDVSSSSNNLPHQIMGRRQTTLQSPPGTLNTITPCAACKLLRRRCV 64

Query: 69  QECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPV 128
           QECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV ENQRADAANSLVYEANVRLRDPV
Sbjct: 65  QECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVAENQRADAANSLVYEANVRLRDPV 124

Query: 129 YGCMGAISALQHQIQALQAELNAVRAEILRYKYREANMIHSSPQQHVPFLSSSAEVVSVA 188
           YGCMGAISALQHQIQALQ ELNAVRAEILRYKYREAN+IHSSP QHVPFLSSSAEVVS+A
Sbjct: 125 YGCMGAISALQHQIQALQVELNAVRAEILRYKYREANIIHSSP-QHVPFLSSSAEVVSIA 184

Query: 189 VPPPPPPPPLPPPSHQDAS-SSSSSLYNRP--AAAADFSTISSDENVTYFVSTSTAHQLN 245
           V  PPPPP LPPP H D S SSSSSLYNRP  A AAD+STISSDENV YFV TST HQL+
Sbjct: 185 V--PPPPPLLPPPPHYDGSASSSSSLYNRPAVAVAADYSTISSDENVPYFVRTSTTHQLD 242

BLAST of Spg028452 vs. ExPASy TrEMBL
Match: A0A6J1J1P9 (LOB domain-containing protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC111482615 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.6e-100
Identity = 204/242 (84.30%), Postives = 215/242 (88.84%), Query Frame = 0

Query: 9   RERFDEIAKKIKRETDVSSNIIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQE 68
           RERF+EIAKKIKRETDVSSN IPPQQ+MGRRH+LQ PPG LNTITPCAACKLLRRRCAQE
Sbjct: 5   RERFEEIAKKIKRETDVSSN-IPPQQIMGRRHSLQAPPGILNTITPCAACKLLRRRCAQE 64

Query: 69  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYG 128
           CPF+PYFSPHEPHKFASVHKVFGASNVSKMLMEV EN RADAANSLVYEANVRLRDPVYG
Sbjct: 65  CPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDPVYG 124

Query: 129 CMGAISALQHQIQALQAELNAVRAEILRYKYREA-NMIHSSP----QQHVPFLSSSAEVV 188
           CMGAIS+LQHQIQALQ ELNAVRAEILR+K+REA NMIHSSP    QQHV FLSSSAEVV
Sbjct: 125 CMGAISSLQHQIQALQIELNAVRAEILRHKFREASNMIHSSPQPQQQQHVSFLSSSAEVV 184

Query: 189 SVAVPPPPPPPPLPPPSHQDASSSSSSLYNRPAAAADFSTISSDENVTYFVS-TSTAHQL 245
           SVAVPPPPP  P       +ASSSSS LYNRP  A D++TISS+ENVTYFVS TST HQL
Sbjct: 185 SVAVPPPPPSLP------HNASSSSSPLYNRPTVATDYNTISSNENVTYFVSTTSTDHQL 239

BLAST of Spg028452 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 266.2 bits (679), Expect = 2.7e-71
Identity = 150/224 (66.96%), Postives = 167/224 (74.55%), Query Frame = 0

Query: 9   RERFDEIAKKIKRETDVSSNIIPPQQVMGRRHTLQGPPGTLNTITPCAACKLLRRRCAQE 68
           RERF+EI KKIKRE D       P Q+ G R  + GPPGTLNTITPCAACKLLRRRCAQE
Sbjct: 5   RERFEEIGKKIKREADAW-----PHQMAGIRRPMSGPPGTLNTITPCAACKLLRRRCAQE 64

Query: 69  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYG 128
           CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPE+QRADAANSLVYEANVRLRDPVYG
Sbjct: 65  CPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYG 124

Query: 129 CMGAISALQHQIQALQAELNAVRAEILRYKYRE--ANMIHSSPQQHVPFLSSSAEVVSVA 188
           CMGAISALQ Q+QALQAEL AVR+EIL+YK RE  A +I  S  Q   F +S    VSV 
Sbjct: 125 CMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPSNSQVAGFHNSGG--VSVI 184

Query: 189 VPPPPPPPPLPPPSHQDASSSSSSLYNRPAAA-ADFSTISSDEN 230
            PPP  P   P P+     S SS ++++P     ++  I S+ N
Sbjct: 185 APPPQRPTTPPQPTTAHPPSPSSCVFSQPTTRDLEYGNIESENN 221

BLAST of Spg028452 vs. TAIR 10
Match: AT2G30340.1 (LOB domain-containing protein 13 )

HSP 1 Score: 238.0 bits (606), Expect = 7.8e-63
Identity = 144/263 (54.75%), Postives = 172/263 (65.40%), Query Frame = 0

Query: 9   RERFDEIAKKIKR-ETDVSSNIIPPQQVMGRRHTLQGPPG-TLNTITPCAACKLLRRRCA 68
           RE F E  + +K+ + D +        VMG R  +  PPG TLNT+TPCAACKLLRRRCA
Sbjct: 5   REGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLLRRRCA 64

Query: 69  QECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPV 128
           +ECPFSPYFSPHEPHKFA+VHKVFGASNVSKML+EV E+QR DAANSLVYEAN+RLRDP+
Sbjct: 65  EECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPI 124

Query: 129 YGCMGAISALQHQIQALQAELNAVRAEILRYKYREANMIHSSPQQHVPFLSSS------- 188
           YGCMGAISALQH IQ+LQ+EL  VR EILR+KY+EA  I S         ++S       
Sbjct: 125 YGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSVSCDQH 184

Query: 189 AEVVSVAVPPPPPPPP---------------------LPPPSHQDASSSSS------SLY 234
           A   ++ +PPPPPPPP                     LP PS   +SSSSS      S+Y
Sbjct: 185 ALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNSSATNSMY 244

BLAST of Spg028452 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-38
Identity = 78/127 (61.42%), Postives = 97/127 (76.38%), Query Frame = 0

Query: 44  GPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVP 103
           G PG+    +PCA+CKLLRRRCA++C F+PYF P +PHKFA VHKVFGASNVSKML E+P
Sbjct: 2   GGPGS----SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELP 61

Query: 104 ENQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRYKYREAN 163
            +QRADA NSLV+EAN R+RDPVYGC+GAIS LQ+Q+  LQ +L   +AEIL  + +   
Sbjct: 62  VHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEP 121

Query: 164 MIHSSPQ 171
            + S  Q
Sbjct: 122 TLQSHHQ 124

BLAST of Spg028452 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 156.0 bits (393), Expect = 3.9e-38
Identity = 72/110 (65.45%), Postives = 91/110 (82.73%), Query Frame = 0

Query: 53  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRADAAN 112
           +PCAACKLLRRRCAQ+C FSPYF   EP KFA+VH+VFGASNV+KML E+P +QR DA +
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 113 SLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRYKYREA 163
           S+VYEAN R+RDPVYGC+GAIS+LQ QI  LQA+L   +AE++  + R++
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

BLAST of Spg028452 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 66/109 (60.55%), Postives = 88/109 (80.73%), Query Frame = 0

Query: 50  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPENQRAD 109
           +T +PCAACK LRR+C  EC F+PYF P +P KFA+VHKVFGASNV+K+L E+  +QR D
Sbjct: 5   STNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64

Query: 110 AANSLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRYK 159
           A NSL YEA++RLRDPVYGC+G IS LQHQ++ LQ +L+  ++E+ +Y+
Sbjct: 65  AVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQ 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038893087.13.3e-10890.04LOB domain-containing protein 15 [Benincasa hispida][more]
XP_004146476.11.7e-10789.26LOB domain-containing protein 15 [Cucumis sativus] >KGN50723.1 hypothetical prot... [more]
XP_008456927.11.1e-10688.80PREDICTED: LOB domain-containing protein 15 [Cucumis melo][more]
XP_023544729.11.8e-10688.02LOB domain-containing protein 15-like [Cucurbita pepo subsp. pepo][more]
KAG7031522.17.0e-10687.19LOB domain-containing protein 15, partial [Cucurbita argyrosperma subsp. argyros... [more]
Match NameE-valueIdentityDescription
Q8L5T53.8e-7066.96LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S... [more]
Q9AT611.1e-6154.75LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 S... [more]
Q8LBW31.9e-3761.42LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
Q9SHE95.5e-3765.45LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=... [more]
O044791.9e-3460.55Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KM948.0e-10889.26LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G219380 PE=3 SV... [more]
A0A1S3C5025.2e-10788.80LOB domain-containing protein 15 OS=Cucumis melo OX=3656 GN=LOC103496729 PE=3 SV... [more]
A0A6J1FVC72.2e-10586.78LOB domain-containing protein 15-like OS=Cucurbita moschata OX=3662 GN=LOC111447... [more]
A0A6J1D0I72.3e-10287.14LOB domain-containing protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1J1P93.6e-10084.30LOB domain-containing protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC11148261... [more]
Match NameE-valueIdentityDescription
AT2G40470.12.7e-7166.96LOB domain-containing protein 15 [more]
AT2G30340.17.8e-6354.75LOB domain-containing protein 13 [more]
AT2G30130.11.3e-3861.42Lateral organ boundaries (LOB) domain family protein [more]
AT1G31320.13.9e-3865.45LOB domain-containing protein 4 [more]
AT1G65620.11.4e-3560.55Lateral organ boundaries (LOB) domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..201
NoneNo IPR availablePANTHERPTHR31301:SF101LOB DOMAIN PROTEINcoord: 39..233
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 39..233
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 54..151
e-value: 8.2E-41
score: 138.6
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 53..154
score: 25.897625

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg028452.1Spg028452.1mRNA