Spg028451 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGTAGGACCATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACAGTGTATGGAGAGGATGTGGACCCCGCAGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTCAAGCTTCAGGTAATAATCATATCATACAAACTTATGTTTTTAAAGGTTATTTCTTTATAACAACTTTTTCTTTGTTTCAGGATCTAACGCATTGCGAGGAAGACGAAAAAGAGGGCATAGTCGAAACATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGATGAGTCCGTCGGCAAACCAACGTGTAAGTTTGCTACACAATTCAGTGGGACGATTGGTACCCTCACACGAGATACAATTCCGTTACATTACAAGACTTGGCCTGAGGTCCCCCAACAAGTCCGAGACAACGTAAAAGATCGACTCTTGGTACGTTCACATTTTTTTGTTATACTATTTGAATCATACATACTTGTTCACTCTTTTTGTTATTAACCATGCAGACGAAATGTGATGTGGATTTGTCAAAGCCGCATATTAACAAGTATGTGGAACGACAAATAATGAACACGTTTAGGGAGTTTAGGAGCGAGTTGTATAGGCACTACAAGGGATTCGAGGACCCTAAAGTTGCTCGAGAAAATCCACCAGAAAGGATTACCGACCAGAACGATTGGAATATGTTATGCGACAGATGGGAGACTCCCGAATGGAAAGTATGTTTTCTTGTTTTACTTATAGTTGTGTATGTTTTTTTTTTTTTTTTTTTGTAAAAAAGCCTACTAATCATTACTTTTCTTTAGAAAAAAGCGGATCAAAATAAGAATAGTCGCTCACAACTCCCCTACAACCATCGAAGTGGATGTAAGTCTTTTGTTCAGAAGCAAGAAGAACTGGTAAGGCAAAGTCATTTTTTCTTTTGTTTTGTCTTTTTACTCCTTATCTCTTTATTATAACTATTGGTGTGTGTTTTGGTCTTAAAGAAAGAAGTACATGGTCGTGACATTGGACCAGTGGATTTGTTCCACGATAGTCATTTTCCTGAGAAGAAGGGATGGATCAACGACAAAGCAAAAGAAGTATACGTAAGTTATATTTCTTAGTAATGAGTGTATGTTCTTTGTATTTTTCATTTGACCATATTATATTATGACTGTAGTTGGAAATGGATGGGCTACTAAAAGCATCGTCAGAACAAGGGTCCGAACAGATCTCGCAACCTGATGTTCTGAAACAGGTTTTGGGAACTCGATCAGGCCATATCAGAGGTCTTGGTTGGGATCCAAAATCTGGCTCATCTGTCAGTGTCTCGTCTTTAAACCCTCGTGAAAAAGAGCTAAAGCAGAAAGTCGAGATGATGCAATCTGAGATGGATGCACTCAAAAGTAGGGAGGAGATGATGCAATCTGAGATGGATGCACTCAAGAGCAGGGAGGAGGTGAGGCAATCTGAAATAAATGCGTTCAAGGGCAAGGAGGAGATATGGGAACAAAGATGGGCTCAAATCCAACATTTGTTTGGCGAACAATCGGGAGGAGGGTCTTTGAACTGATAGGTATGTACCAAGTTTAGGTGATTTATGTACTATACTTAATGTAGTTGACTGGTACATGACTATTATATGATTTGTGTATGTATGTGGCTATCCTACAGTTATGGTAGCCGTTGAGTAGTGATTGTTTTGTTTATTGGTTTTGTTTGAAGCATATAAGGGGTGAGTTTCATTAGATATGTTGTTCTTTTAAAGCTTTGATTTTGTTAGCTTCCCTAGTTCACTTGTTAAAGCTTTTGAACATGTGAGTGTAACTTTTTTTAAGGTTTTCTAGATGTGGGTTGTATAAGTGTTGATGTTGGTCGTTTTTTTTTTAAAGTTGGTCGTTTATGTGCGCTGTATAAGTGTTGATGTTGTTCTTTTAAATCTTTGATTTTGTTAGCTTCCTAGTTCACTTGTTAAAGCTTTTGAACATGTGAGTGTAACTTTTTTTGAACTAGTTCTTATGTGTGCAACTTGGTTCGGTTATGCATGTCCATTAGTTGTTTGGTTTCGTGAGTTGAGAGATTATTTACTTAATATAGTTTGTTATATCTTACTAATGTTGGTCATAAGTTTGGTTTTACACTTCTATCTTCGATTGTTCTAGTTCCTTTGCCTGTTTAGTGTTTAAAATTTCAAACTTGAGGGATGAGTTGCTTTTCTAAGTAGTTAGAGTTTGAGTTTCATTAGTTTTGCTGAGCTAGTTAGAGTTTGACGATTCATGTATGTCCATTAGTTGTTCGATTATGCATGCCTGTTTATTGTTTCACTTTTGAAACTTGAGGGATGAGTTGCTTTTCTAAGTAGCTAGTTCATATGTTAGATCATTTTTCAGTGTTTGTTTTGATGGCACATGCTTCTTTTGATTTCGTTGACGGTTCATTTCGTTGTTTAATTGGTTTTGTTTGAAGGTTTATGAGCATGGGGGGTGGGTTGCTTTTATGTTCAAATATGAAGTACTTATTTTTTAAACTTTGTGTATGGAAGGAAGATTTAGTTCATTTGCTTGCTTATTATATAACCTTTGAAAGTTGAGGGATTAGTTACTTCGAAGTATTTTGAGTTCATGTTTCTTAACTTTAGGTTACTTAGCAAAAAGTTGGTCGTTTATGTGCGTTGTATAAGTGTTGAAGTTGTTTTTCTAAAGCATTGAATTTTTTAGCTTCTCTAGTTCACTTGTTAAAGGTTTTGAGCATGTGAGGGTAACTTCTCTAGTTCACTTGTTAAAGGTTTTCTAATGTTAGCTTCTCTAGTACGTCTCAAAATTTAGATTTTCTTTTTTGAACTAGTTCTTATGTGTGGAACTTCGAATAAGGAAAGGAATGATTGCGTTTATGTGGCTTGTGTTTGGAGATAGTGTGGTCCACGATTTGCAGGCTAATTCTATTTCTGTGCACTGTTCTTTTATGTACATAGGTTATTTATGGGGTAGATGATTTTTCTTGGAAATTTGACAATACTAATAGGCACTCTGTTCATGTTTTGCAGAGTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCAAAGAAGTTGAATCACTTTTTGTGTTCAGATTGTTCATCAGAAAATGATGTGAATAGGTCCTTGAATCATTTTCCAGTATAGGCTTTTGGTATTTTTATAATTTTGAAGATATTTTGTATAGACCATTGAATTCGCATTATGTGCAGGATTGAAGTCCGGAAGTCCTACTAGGATTGTTTTTGAAACACATTTTATTAAACTCATTATATAAATATTAGTGCTCTTGAACACAATTTGGAATAGGTGACTTATAACTTCATTTTGGTACCCCTTTGTCATTGATTGGGATAATGGTACTGCATTTTTGTTTATTTCGTTTGTTATCAATAAAATTTGAAATGACATGAACTTTCGCACTCAAACTCTTTAGTTTGCATGGGAATCCTTTTCACTCCAGGACTGCCTAATTCTACAATTGACACTAAAAACAAACCAAAAAAAAAATTGGTGGTCTATGCCGACGCAACTTACGTCGGCATAGACAATGGAGTCATGCTCTAGGCCAACGCAAGCTTGCGCCGACATATTATCTACGCCGACGCACAAACCAACATATTCAGATTATCAAGGCCGACGCAATGTGCGTCGGCATAGACCTTCTAAGCCGACGCACGATGTTTGCGTCGGCGTATACCTCTACGCCGACGACCTTGCCGACGCAATCTTCGCGTCGGGGAGTTGTCTACGCCGACGCAACGTTGCATCGTCGTAG ATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACAGTGTATGGAGAGGATGTGGACCCCGCAGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTCAAGCTTCAGGATCTAACGCATTGCGAGGAAGACGAAAAAGAGGGCATAGTCGAAACATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGATGAGTCCGTCGGCAAACCAACGTGTAAGTTTGCTACACAATTCAGTGGGACGATTGGTACCCTCACACGAGATACAATTCCGTTACATTACAAGACTTGGCCTGAGGTCCCCCAACAAGTCCGAGACAACGTAAAAGATCGACTCTTGACGAAATGTGATGTGGATTTGTCAAAGCCGCATATTAACAAGTATGTGGAACGACAAATAATGAACACGTTTAGGGAGTTTAGGAGCGAGTTGTATAGGCACTACAAGGGATTCGAGGACCCTAAAGTTGCTCGAGAAAATCCACCAGAAAGGATTACCGACCAGAACGATTGGAATATGTTATGCGACAGATGGGAGACTCCCGAATGGAAAAAAAAAGCGGATCAAAATAAGAATAGTCGCTCACAACTCCCCTACAACCATCGAAGTGGATGTAAGTCTTTTGTTCAGAAGCAAGAAGAACTGAAAGAAGTACATGGTCGTGACATTGGACCAGTGGATTTGTTCCACGATAGTCATTTTCCTGAGAAGAAGGGATGGATCAACGACAAAGCAAAAGAAGTATACTTGGAAATGGATGGGCTACTAAAAGCATCGTCAGAACAAGGGTCCGAACAGATCTCGCAACCTGATGTTCTGAAACAGGTTTTGGGAACTCGATCAGGCCATATCAGAGGTCTTGGTTGGGATCCAAAATCTGGCTCATCTGTCAGTGTCTCGTCTTTAAACCCTCGTGAAAAAGAGCTAAAGCAGAAAGTCGAGATGATGCAATCTGAGATGGATGCACTCAAAAGTAGGGAGGAGATGATGCAATCTGAGATGGATGCACTCAAGAGCAGGGAGGAGGTGAGGCAATCTGAAATAAATGCGTTCAAGGGCAAGGAGGAGATATGGGAACAAAGATGGGCTCAAATCCAACATTTGTTTGGCGAACAATCGGGAGGAGGAGTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCAAAGAAGTTGAATCACTTTTTGTGTTCAGATTGTTCATCAGAAAATGATGTGAATAGGCCAACGCAAGCTTGCGCCGACATATTATCTACGCCGACGCACAAACCAACATATTCAGATTATCAAGGCCGACGCAATGTGCGTCGGCATAGACCTTCTAAGCCGACGCACGATGTTTGCGTCGGCGTATACCTCTACGCCGACGACCTTGCCGACGCAATCTTCGCGTCGGGGAGTTGTCTACGCCGACGCAACGTTGCATCGTCGTAG ATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACAGTGTATGGAGAGGATGTGGACCCCGCAGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTCAAGCTTCAGGATCTAACGCATTGCGAGGAAGACGAAAAAGAGGGCATAGTCGAAACATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGATGAGTCCGTCGGCAAACCAACGTGTAAGTTTGCTACACAATTCAGTGGGACGATTGGTACCCTCACACGAGATACAATTCCGTTACATTACAAGACTTGGCCTGAGGTCCCCCAACAAGTCCGAGACAACGTAAAAGATCGACTCTTGACGAAATGTGATGTGGATTTGTCAAAGCCGCATATTAACAAGTATGTGGAACGACAAATAATGAACACGTTTAGGGAGTTTAGGAGCGAGTTGTATAGGCACTACAAGGGATTCGAGGACCCTAAAGTTGCTCGAGAAAATCCACCAGAAAGGATTACCGACCAGAACGATTGGAATATGTTATGCGACAGATGGGAGACTCCCGAATGGAAAAAAAAAGCGGATCAAAATAAGAATAGTCGCTCACAACTCCCCTACAACCATCGAAGTGGATGTAAGTCTTTTGTTCAGAAGCAAGAAGAACTGAAAGAAGTACATGGTCGTGACATTGGACCAGTGGATTTGTTCCACGATAGTCATTTTCCTGAGAAGAAGGGATGGATCAACGACAAAGCAAAAGAAGTATACTTGGAAATGGATGGGCTACTAAAAGCATCGTCAGAACAAGGGTCCGAACAGATCTCGCAACCTGATGTTCTGAAACAGGTTTTGGGAACTCGATCAGGCCATATCAGAGGTCTTGGTTGGGATCCAAAATCTGGCTCATCTGTCAGTGTCTCGTCTTTAAACCCTCGTGAAAAAGAGCTAAAGCAGAAAGTCGAGATGATGCAATCTGAGATGGATGCACTCAAAAGTAGGGAGGAGATGATGCAATCTGAGATGGATGCACTCAAGAGCAGGGAGGAGGTGAGGCAATCTGAAATAAATGCGTTCAAGGGCAAGGAGGAGATATGGGAACAAAGATGGGCTCAAATCCAACATTTGTTTGGCGAACAATCGGGAGGAGGAGTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCAAAGAAGTTGAATCACTTTTTGTGTTCAGATTGTTCATCAGAAAATGATGTGAATAGGCCAACGCAAGCTTGCGCCGACATATTATCTACGCCGACGCACAAACCAACATATTCAGATTATCAAGGCCGACGCAATGTGCGTCGGCATAGACCTTCTAAGCCGACGCACGATGTTTGCGTCGGCGTATACCTCTACGCCGACGACCTTGCCGACGCAATCTTCGCGTCGGGGAGTTGTCTACGCCGACGCAACGTTGCATCGTCGTAG MLGQSREHDASTVYGEDVDPAVVGSSTEPSSAQASGSNALRGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKTWPEVPQQVRDNVKDRLLTKCDVDLSKPHINKYVERQIMNTFREFRSELYRHYKGFEDPKVARENPPERITDQNDWNMLCDRWETPEWKKKADQNKNSRSQLPYNHRSGCKSFVQKQEELKEVHGRDIGPVDLFHDSHFPEKKGWINDKAKEVYLEMDGLLKASSEQGSEQISQPDVLKQVLGTRSGHIRGLGWDPKSGSSVSVSSLNPREKELKQKVEMMQSEMDALKSREEMMQSEMDALKSREEVRQSEINAFKGKEEIWEQRWAQIQHLFGEQSGGGVHPSCMGMTIEEAKKLNHFLCSDCSSENDVNRPTQACADILSTPTHKPTYSDYQGRRNVRRHRPSKPTHDVCVGVYLYADDLADAIFASGSCLRRRNVASS Homology
BLAST of Spg028451 vs. NCBI nr
Match: XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 355.1 bits (910), Expect = 9.3e-94 Identity = 190/390 (48.72%), Postives = 256/390 (65.64%), Query Frame = 0
BLAST of Spg028451 vs. NCBI nr
Match: XP_038887413.1 (uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]) HSP 1 Score: 342.8 bits (878), Expect = 4.8e-90 Identity = 192/417 (46.04%), Postives = 257/417 (61.63%), Query Frame = 0
BLAST of Spg028451 vs. NCBI nr
Match: XP_038887408.1 (poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 342.8 bits (878), Expect = 4.8e-90 Identity = 192/417 (46.04%), Postives = 257/417 (61.63%), Query Frame = 0
BLAST of Spg028451 vs. NCBI nr
Match: XP_038887410.1 (poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida]) HSP 1 Score: 294.7 bits (753), Expect = 1.5e-75 Identity = 176/417 (42.21%), Postives = 235/417 (56.35%), Query Frame = 0
BLAST of Spg028451 vs. NCBI nr
Match: XP_038887411.1 (poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida] >XP_038887412.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]) HSP 1 Score: 270.4 bits (690), Expect = 3.0e-68 Identity = 141/288 (48.96%), Postives = 183/288 (63.54%), Query Frame = 0
BLAST of Spg028451 vs. ExPASy Swiss-Prot
Match: F4JL28 (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.2e-06 Identity = 21/31 (67.74%), Postives = 30/31 (96.77%), Query Frame = 0
BLAST of Spg028451 vs. ExPASy Swiss-Prot
Match: F4JGB7 (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 3.2e-04 Identity = 19/29 (65.52%), Postives = 25/29 (86.21%), Query Frame = 0
BLAST of Spg028451 vs. ExPASy TrEMBL
Match: A0A5A7TRX4 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001040 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 1.8e-58 Identity = 135/322 (41.93%), Postives = 196/322 (60.87%), Query Frame = 0
BLAST of Spg028451 vs. ExPASy TrEMBL
Match: A0A6J1DUH3 (uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023212 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 4.8e-56 Identity = 116/264 (43.94%), Postives = 169/264 (64.02%), Query Frame = 0
BLAST of Spg028451 vs. ExPASy TrEMBL
Match: A0A5A7SPZ3 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 1.7e-53 Identity = 130/339 (38.35%), Postives = 190/339 (56.05%), Query Frame = 0
BLAST of Spg028451 vs. ExPASy TrEMBL
Match: A0A5A7TFG0 (Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold768G00210 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 3.7e-48 Identity = 123/315 (39.05%), Postives = 173/315 (54.92%), Query Frame = 0
BLAST of Spg028451 vs. ExPASy TrEMBL
Match: A0A5A7US78 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001230 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 3.2e-47 Identity = 121/315 (38.41%), Postives = 173/315 (54.92%), Query Frame = 0
BLAST of Spg028451 vs. TAIR 10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 56.2 bits (134), Expect = 8.3e-08 Identity = 21/31 (67.74%), Postives = 30/31 (96.77%), Query Frame = 0
BLAST of Spg028451 vs. TAIR 10
Match: AT4G22140.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 56.2 bits (134), Expect = 8.3e-08 Identity = 21/31 (67.74%), Postives = 30/31 (96.77%), Query Frame = 0
BLAST of Spg028451 vs. TAIR 10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 48.1 bits (113), Expect = 2.3e-05 Identity = 19/29 (65.52%), Postives = 25/29 (86.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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