
Spg028435 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAAAGGGTTCTGTTAGGGACCAAGGTAGTATGGGATGCCTTTGTCCCACATTGGAAAGATATGGGCTTCTAATGGGGTATATAAGTGGTTGGTTCTCCCTCCCCAATCGCCTGGCTTTTGGGGTGTGGCTCTCCAACTACTTAGATACCTAACAATTGGTATCAAAGCCGGTGGTCGACGGCTTTGGAGAGGAGTGGCGGCAGAGGGGCTGACTGGAACCAGCCGAGTGAAGCGTCGCCGTGCACAGCCGCCGAGACGTCGGCTTTCCGGGGAGGGGCAATTGTTAGGGACCAAGGTAGTATGGGATGCCTTTGTCCCACATTGGAAAGATATGGGCTTCTAATGGGGTATATAAGTGGTTGGTTCTCCCTCCCCAATCGCCTGGCTTTTGGGGTGTGGCTCTCCAACTACTTAGATACCTAACAGGTTCCAAGAATCATATATTGTTATTGATTTACACAAAGCCAAGGCAAAAATATTAGGAAAAGCAATTGAGAAAAGGACCGCACCAATCCAAAAGTCTTTTAAAAATCCAATCGCTCAAATGTTGCGCACCATGTTTTGATTCACTTTAATAAAAGAAATTTTGTCTTGAAGAAGCCCTTTTTTTTTTATATTTTACAAAGAGGTGGGGGCAAGGCTCAATCCTAGAACGTGAGGGAGGGTTGGGACCACTCGGACCACCAAGACAATAGGTCATTTGCGTCTTTTCTTTTCCTTGTTTTTGACGAATAGGTCGTTTGTGTCTTGAAGATGCCTTTTCAAAGCCCATTCAACAAAAGGAGAGACATAGGCCAAAATTCATTGAGAGAATAGCCAAGTTTAGTGATAATCACCTTCCTTGGTAGACCATTCTTTTCAATATGGAATCTCCATATCCATTAGTGAGCAAAGTGGGGTTCCTTTGCTTGATATTGCCAATTCCAAGCCCCCATTCAAAAGGTAGTTGGACATTTAGACCAATTAACCAGATGGTTGCCTCCTTTCAATCTCCCCATTCCTAAGAAAGCTTAGGTAGAGTTTTAGGAAGTTCACTGCCTAATTTTTCCTTGGTTGTTACCTGTTAGCATTGAAGAAGCTTATGAGAGATTTCTTATGGAAAAGTGTCGAGGAGGGTGGGGCCTCCCACTTTATCAATCAAAAGGTAGTTTCTAGGCTGATTGACCTTGGGGGTTTAGGTTTGGGAAATCTAATACTTCACAGCAAGACCTTGTTGGCCAAGTCTTTGTGGTGCTTCCTATTGGAGCCCAATGCCTTATGGAACAGGGTTATAAGTACAGTCTTCATCTTTTTTAGTGGACTTCTACTTGTGGGTCAAAAGACATATCCAAGATCCAAGAACTCTTGAAAAGCTATTTCTTCAGGTTATCCTTTCTTTTCTAGGTTTGTGAATCTCTATTTGAGATGGTTCGAGCTCTTACTTTTGGGAGGACGGTTGGTTGGACAATACTCCTTTGTTCCTTTGGTCATACCATCACTCTTCCTTCAAAGGTTGTTATGTGACCTCAGTTATTTCTTCTTTTGGCACTTCTCCTTCATTTACTTTTGGCATATGTCGCCCTTTGTCAGATAGAGAGTCAATTGACATCTCTTCTTTACTTTCTTTGTTGGAGCCTATCCATGTTTCTTCTGGGAGCAAGGGTCTTTGTGTCTAGTCCCCTATCCTCTTGAGGGTTTTTCTTGTCATTCATTCTTCCTTCTTTTCTGCAATCCTAGTCTTCCTCATTCCCCTTTATTTTCCACCTCATGGAATGTTAAAGTCCATAGTAAAGTCATTTTCTTTGTGCATAAGGTTTTTCATGGAAAAGCTCCCACTATAGATCAGATTTTTAGCCACTCCTCCTTCTTGTTGGAGTGGAATGGTGCCTTCTTTGCAAAGATGCGTCAAAGGATCTAGAGCACATCCTTGGTAGTTGATGGTTTGCTAGTGTGATTTGGGATCTTTTCTTTTTTGAATTCTTGGCATTCACTTGGCTCAAAATAACAGGCGTTGCTTTACAATGGAGGAGGTGCTTTCCACCCTCAATTTCATTACAGGGAGGTATTCCTTGGCATTATAGATGTTTTGCCACCTTATAAGGGTTTTAGCTCGAAAGAAATCAGAGAATTTTCAATGATGTTGAGAGGTCTTGGAAAGAGGTTTGTCTTATATAGGATTTAATGCTTCCCTTTGTGCTTTTACTAAGGATTTCTACAACTATTCTTCAGGCTTGGTCCTTCTGCATTGGAGCCAACTAAATGA ATGCAAAAGGGTTCTGTTAGGGACCAAGGTAGTATGGGATGCCTTTGTCCCACATTGGAAAGATATGGGCTTCTAATGGGCCGGTGGTCGACGGCTTTGGAGAGGAGTGGCGGCAGAGGGGCTGACTGGAACCAGCCGAGTGAAGCGTCGCCGTGCACAGCCGCCGAGACGTCGGCTTTCCGGGGAGGGGCAATTGTTAGGGACCAAGCATTGAAGAAGCTTATGAGAGATTTCTTATGGAAAAGTGTCGAGGAGGGTGGGGCCTCCCACTTTATCAATCAAAAGGTAGTTTCTAGGCTGATTGACCTTGGGGGTTTAGGTTTGGGAAATCTAATACTTCACAGCAAGACCTTGTTGGCCAAGTCTTTGTGGTGCTTCCTATTGGAGCCCAATGCCTTATGGAACAGGGTTATAAGTACAGTTTGTGAATCTCTATTTGAGATGGTTCGAGCTCTTACTTTTGGGAGGACGGTTGGTTGGACAATACTCCTTTGTTCCTTTGGTCATACCATCACTCTTCCTTCAAAGGCGTTGCTTTACAATGGAGGAGGTGCTTTCCACCCTCAATTTCATTACAGGGAGGTATTCCTTGGCATTATAGATGTTTTGCCACCTTATAAGGGTTTTAGCTCGAAAGAAATCAGAGAATTTTCAATGATGTTGAGAGGTCTTGGAAAGAGGCTTGGTCCTTCTGCATTGGAGCCAACTAAATGA ATGCAAAAGGGTTCTGTTAGGGACCAAGGTAGTATGGGATGCCTTTGTCCCACATTGGAAAGATATGGGCTTCTAATGGGCCGGTGGTCGACGGCTTTGGAGAGGAGTGGCGGCAGAGGGGCTGACTGGAACCAGCCGAGTGAAGCGTCGCCGTGCACAGCCGCCGAGACGTCGGCTTTCCGGGGAGGGGCAATTGTTAGGGACCAAGCATTGAAGAAGCTTATGAGAGATTTCTTATGGAAAAGTGTCGAGGAGGGTGGGGCCTCCCACTTTATCAATCAAAAGGTAGTTTCTAGGCTGATTGACCTTGGGGGTTTAGGTTTGGGAAATCTAATACTTCACAGCAAGACCTTGTTGGCCAAGTCTTTGTGGTGCTTCCTATTGGAGCCCAATGCCTTATGGAACAGGGTTATAAGTACAGTTTGTGAATCTCTATTTGAGATGGTTCGAGCTCTTACTTTTGGGAGGACGGTTGGTTGGACAATACTCCTTTGTTCCTTTGGTCATACCATCACTCTTCCTTCAAAGGCGTTGCTTTACAATGGAGGAGGTGCTTTCCACCCTCAATTTCATTACAGGGAGGTATTCCTTGGCATTATAGATGTTTTGCCACCTTATAAGGGTTTTAGCTCGAAAGAAATCAGAGAATTTTCAATGATGTTGAGAGGTCTTGGAAAGAGGCTTGGTCCTTCTGCATTGGAGCCAACTAAATGA MQKGSVRDQGSMGCLCPTLERYGLLMGRWSTALERSGGRGADWNQPSEASPCTAAETSAFRGGAIVRDQALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVISTVCESLFEMVRALTFGRTVGWTILLCSFGHTITLPSKALLYNGGGAFHPQFHYREVFLGIIDVLPPYKGFSSKEIREFSMMLRGLGKRLGPSALEPTK Homology
BLAST of Spg028435 vs. NCBI nr
Match: XP_022151711.1 (uncharacterized protein LOC111019624 [Momordica charantia]) HSP 1 Score: 87.8 bits (216), Expect = 1.4e-13 Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Spg028435 vs. NCBI nr
Match: XP_030497604.1 (uncharacterized protein LOC115713262 [Cannabis sativa]) HSP 1 Score: 77.0 bits (188), Expect = 2.4e-10 Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of Spg028435 vs. NCBI nr
Match: KAB2623078.1 (ribonuclease H protein [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 75.5 bits (184), Expect = 7.0e-10 Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of Spg028435 vs. NCBI nr
Match: RVW35353.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]) HSP 1 Score: 74.3 bits (181), Expect = 1.6e-09 Identity = 45/125 (36.00%), Postives = 64/125 (51.20%), Query Frame = 0
BLAST of Spg028435 vs. NCBI nr
Match: XP_028093546.1 (uncharacterized protein LOC114293627 [Camellia sinensis]) HSP 1 Score: 73.9 bits (180), Expect = 2.0e-09 Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of Spg028435 vs. ExPASy TrEMBL
Match: A0A6J1DFI2 (uncharacterized protein LOC111019624 OS=Momordica charantia OX=3673 GN=LOC111019624 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 6.6e-14 Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Spg028435 vs. ExPASy TrEMBL
Match: A0A5N5H648 (Ribonuclease H protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_025260 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 3.4e-10 Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of Spg028435 vs. ExPASy TrEMBL
Match: A0A438DIR5 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_106 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 7.5e-10 Identity = 45/125 (36.00%), Postives = 64/125 (51.20%), Query Frame = 0
BLAST of Spg028435 vs. ExPASy TrEMBL
Match: A0A438JCR4 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_806 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.7e-09 Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = 0
BLAST of Spg028435 vs. ExPASy TrEMBL
Match: A0A803P465 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.7e-09 Identity = 45/122 (36.89%), Postives = 62/122 (50.82%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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