Spg028425 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028425
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CCHC-type domain-containing protein
Location	scaffold7: 12317941 .. 12321360 (+)
RNA-Seq Expression	Spg028425
Synteny	Spg028425

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGCTTCCCTTCGTGGTCTGAAGGTTAGGGTTCTGGTGGTTCCATTTTAATCCGACGAGCGTGCGGCGGAGGCGGGCGATCGACGAGCAAGAGGCTGAGACTCATCGTTTGTGGGGCGGCGACGGTTTGAGATCAGATTGTAGTGGGTTGGCTTCTTGAATCAGTTGTGCGGCGCGGTGGGCAAGCGGTTGAGCAGAGGGCAGACTCCGGCGTGAGCGAGGTGGTGAAGGCGGTCGGAGAACAGGGGAGCTGTCGTCGGTCGTGAGGCGGTGTCGTTTCTCTTCGGCGAGTGGAGGAGGTGGTTCACGCGTTTTCGGCTGAGGCGGTGCTTACAGTGTTTTCAGTTTCTGCAGGTTGTGGGTTCTTCGGGGCGCCTTCTCGGTGGGTTCTTTTGACTTTGGTTTTCGGTATTTTGAATGTGAGCTTGAGTCTCTGCTGAGTGTGAATTTGTTTTGTTGAGTTTGGGCTTGATTGTCGTGGAGGATTTTCGGATGTGAGTGTGAAGGTTGTTGCCGTGGGCTGTGAGGCAGCGGTAAGTGGTTTCTGGCGCATAGTATAGGTACGGGTGTGGGTACTATTGGCCACGACTCCTGTTGATTTGTTGTGTGGGTGTGGTTCTACCTTTACGGCGTTTCTGTTCTTGTAGTGTGTTTGATTGAGTGAGCTTGGATGAAGGGAGATTTACGAGGATGGATGACTTGGTGAAGAAGGGGAAGTCGTGGCTTATCGGGGAGGAGGCGGAGGTGGTACGCCCAGGTGCAGTACCGTCTTCTCTGCCGGCGACAGATTTGGACTTATGTGTGGTGGGTAAGGTCTTATCGTCCAAGCAGGTCAATCCAGAGGCCTTTCGCAATGTGATGCGGTCGGCATGGAGAGTTCACAATGCGACACGTGTGGAGCCGGCTGGAGAGAATATCTTTGTGATTCAGTTTCGTACCAGGGGTGAAAAGTCGAGAGTTCTGGGTACTGGTCCTTGGGCCTTTGATCGGTCCCTTGTCGTGCTTAAGGAGTCAAGGGATGTTGCGTCGGTGCTAGAAACAGAGTTTAGAGACTGTCCTTTTTGGGTGCAGATTCATAATGTCCCTATGAAGTGATAGACGAGAGGCATGGTGCAGCATCTGGGAGGCAAGATTGGGGTGGTTGAGAAAGTGGGCGGTTCAAATGAGAATGATTGGATAGGCCCTATACTGCGGATTAGAGTTCGTCTTCGGTTGGACCGACCACTCCGAAGGGGGTTCCATATGCAGGACGACGATGGGAATGATTCTTGGTGTCCAGTATTGTATGAGCGTCTTCCGGATTTCTGTTTTGGATGTGGATGTTTAGGTCACTCGAGGCGGGAATGTGAAGGTGTTGGGGCGAGTTCTTCGGGAGTGGGGGAGGATCAATATGGTGAGTGGCTGAGAGTAGGTGCTTTTCTTGGGGAGAGTATCCGACGGGATCTAGATCAGGGAGGTGTAAAGGACAGTTGGAAGCAGTCCGTAGTGGCCCCCAAGCCTGTTTCAGGAGAGGTAGTAGGTCCTGTTTAGAGTGATGTGCATGAGAAGGAGAAAGGTGTATATGAAAGCATTGTTGGGGAGGGACTGTCAGTTCCTTCTATTGTTACCCAGGCTGAGATTTGCATGGTGGAGGGAGGGAAGGAAGCTCGGGTGGAGGGCAGTGAGAAAGGTAAACAGAGGGTGGGGCATGGTGCTTCTGAACCATGGTACACCTATGTGGAGGGGGAGGCTATGGTGGTGGATAAGGTGGATATGGTGCAGGGTAGAGAGGTTGAGAAGGGAGGGAAGAGTACCAGTAGTAAAGGGTGGAAGAGGCTCCACAACTAGCGGCTGCTGATGACTAACCACTGTCACATTTTTAAGAGCGTTAGCTAACATTGCAATATCAGCCCAAATGGTAGCCACGCCATCAACTTTTAACACACTCTTAACTTTTTTATTTGAGCCTCTAACATCTGACCACTGACAACTATTGGTTGATATTCTTTCTAAAATTTCATGGGCTTCATTAAAAGTTTTTGCCAAAAGGACCCCTCTAGCCGAAGCATCATCCATACCTTGGGTTGCTCCATTTAACCCATTGTAAAATGTTTCCATTTGGATACAATGTGGTAAACCATGGTGGGGACACTTTTGCAAAAGCTCCTTAAACCTCTCCCAAGCCTCACTAAAAGTTTCATCTTCAAGTTGCCTAAACCCTACTATCTCACTCCTTAATTTGACATTCCTAGTTGGTGGAAAATATTTACTAAGAAATTTTTCCGCTAACTCATTCCATGTCCTAATTGATCTTGGAGCAAAAGAATTTAACCACGCTTTTGCTCCGTCTCTAAGAGAATACGGGAACAAAGTTAATCTAAGGGCATCTCTAGACATTCCTTGAATTACAAAGGAATCACTAACTCCTAGAAAAGACTTAAGATGTAAATGAGGGTCTTCAGATGACAAACCATGGAACTGACCCACGGTTTGCAACATCTGAAACATTACCGATTTCATTTCAAAATTTGCTGCCTCAATTTGAGGACGTGCAATTCCTGGATTTAGCTCATCAAACATTGGAAAAGCATACGCTCGAATGGCTCTGGTCCTATCATTCGCTACCAAGATAGGATTCTCAGCCTGATTATTTTGCTGTCCATTTTTCTCCAGCGGTGGATTTTGCTGCAGCACACGATTCTGGGGATCAAGTGGATCTTCTAGACTCTGCGGGAGGCGCGGCACGTCAGCCATTGGATTTTTGTTTCTACACTGCTCTCTCCTTCTTCTCCTGAATGTCCTCTCAATTTCTGGATCAAGCTCGAACCTTACCCCAGGCGGATCGTTCATGCACCAAACTCACACCTGCAAAAACAAAAGAAACAATCAAAAAGTTCTAGTACCAAACCACTAAAACACATACACAAAACAGATCAGATAAAAACTTATTCAAGTCCCCGGCAACGGCGCCAAAAACTTGTTGGGTTTCCAAAGTGGGTGAAAATGTAGGAAAAATAGACTCTAGAACGCAGTGCAAGCATACACAATCCGCATCAAGTAATAAGTATTTATCGAATCCAGAGGCTGAATAGCTCTCACTTTATCTATTTTGCATAACTCTTTAGTGGTTTCGAAAGTGGTTAAAATGATTGGTTTTGATATAATGTTGAAGCAAAAGAAATGGTAGAACAGAAAGTAAACAAATAAAGCAGACAGATTAGAAACAGACGTTGGTCAGGATTTAGTAATTGTTTTAAAAGATGCTCTAGCAATATTATTGATTAGGCAAAACTCTTACAGTCTTATTAGCAGGATCCTCCCAGAACTCTGGATTTTTTGGAATGTGTTTCAACTCCAATGACGCTCTACCGATCAAGCACTAGGCAACTGGCTATCCCTAGCTCAGTCACTGGCGTTCACCAATACACAATGATCTAG

mRNA sequence

ATGAGGGCTTCCCTTCGTGGTCTGAAGGTTGTGGGTTCTTCGGGGCGCCTTCTCGTGAGCTTGGATGAAGGGAGATTTACGAGGATGGATGACTTGGTGAAGAAGGGGAAGTCGTGGCTTATCGGGGAGGAGGCGGAGGTGGTACGCCCAGGTGCAGTACCGTCTTCTCTGCCGGCGACAGATTTGGACTTATGTGTGGTGGGTAAGGTCTTATCGTCCAAGCAGGTCAATCCAGAGGCCTTTCGCAATGTGATGCGGTCGGCATGGAGAGTTCACAATGCGACACGTGTGGAGCCGGCTGGAGAGAATATCTTTGTGATTCAGTTTCGTACCAGGGGTGAAAAGTCGAGAGTTCTGGGTACTGGTCCTTGGGCCTTTGATCGGTCCCTTGTCCATCTGGGAGGCAAGATTGGGGTGGTTGAGAAAGTGGGCGGTTCAAATGAGAATGATTGGATAGGCCCTATACTGCGGATTAGAGTTCGTCTTCGGTTGGACCGACCACTCCGAAGGGGGTTCCATATGCAGGACGACGATGGGAATGATTCTTGGTGTCCAGTATTGTATGAGCGTCTTCCGGATTTCTGTTTTGGATGTGGATGTTTAGGTCACTCGAGGCGGGAATGTGAAGGTGTTGGGGCGAGTTCTTCGGGAGTGGGGGAGGATCAATATGGTGAGTGGCTGAGAGTAGGTGCTTTTCTTGGGGAGAGTATCCGACGGGATCTAGATCAGGGAGGTGTAAAGGACAGTTGGAAGCAGTCCGTAGTGGCCCCCAAGCCTGTTTCAGGAGAGGCTGAGATTTGCATGGTGGAGGGAGGGAAGGAAGCTCGGGTGGAGGGCAGTGAGAAAGGTAAACAGAGGGTGGGGCATGGTGCTTCTGAACCATGGTACACCTATGTGGAGGGGGAGGCTATGGTGGTGGATAAGGTGGATATGGTGCAGGGTAGAGAGGATCCTCCCAGAACTCTGGATTTTTTGGAATGTGTTTCAACTCCAATGACGCTCTACCGATCAAGCACTAGGCAACTGGCTATCCCTAGCTCAGTCACTGGCGTTCACCAATACACAATGATCTAG

Coding sequence (CDS)

ATGAGGGCTTCCCTTCGTGGTCTGAAGGTTGTGGGTTCTTCGGGGCGCCTTCTCGTGAGCTTGGATGAAGGGAGATTTACGAGGATGGATGACTTGGTGAAGAAGGGGAAGTCGTGGCTTATCGGGGAGGAGGCGGAGGTGGTACGCCCAGGTGCAGTACCGTCTTCTCTGCCGGCGACAGATTTGGACTTATGTGTGGTGGGTAAGGTCTTATCGTCCAAGCAGGTCAATCCAGAGGCCTTTCGCAATGTGATGCGGTCGGCATGGAGAGTTCACAATGCGACACGTGTGGAGCCGGCTGGAGAGAATATCTTTGTGATTCAGTTTCGTACCAGGGGTGAAAAGTCGAGAGTTCTGGGTACTGGTCCTTGGGCCTTTGATCGGTCCCTTGTCCATCTGGGAGGCAAGATTGGGGTGGTTGAGAAAGTGGGCGGTTCAAATGAGAATGATTGGATAGGCCCTATACTGCGGATTAGAGTTCGTCTTCGGTTGGACCGACCACTCCGAAGGGGGTTCCATATGCAGGACGACGATGGGAATGATTCTTGGTGTCCAGTATTGTATGAGCGTCTTCCGGATTTCTGTTTTGGATGTGGATGTTTAGGTCACTCGAGGCGGGAATGTGAAGGTGTTGGGGCGAGTTCTTCGGGAGTGGGGGAGGATCAATATGGTGAGTGGCTGAGAGTAGGTGCTTTTCTTGGGGAGAGTATCCGACGGGATCTAGATCAGGGAGGTGTAAAGGACAGTTGGAAGCAGTCCGTAGTGGCCCCCAAGCCTGTTTCAGGAGAGGCTGAGATTTGCATGGTGGAGGGAGGGAAGGAAGCTCGGGTGGAGGGCAGTGAGAAAGGTAAACAGAGGGTGGGGCATGGTGCTTCTGAACCATGGTACACCTATGTGGAGGGGGAGGCTATGGTGGTGGATAAGGTGGATATGGTGCAGGGTAGAGAGGATCCTCCCAGAACTCTGGATTTTTTGGAATGTGTTTCAACTCCAATGACGCTCTACCGATCAAGCACTAGGCAACTGGCTATCCCTAGCTCAGTCACTGGCGTTCACCAATACACAATGATCTAG

Protein sequence

MRASLRGLKVVGSSGRLLVSLDEGRFTRMDDLVKKGKSWLIGEEAEVVRPGAVPSSLPATDLDLCVVGKVLSSKQVNPEAFRNVMRSAWRVHNATRVEPAGENIFVIQFRTRGEKSRVLGTGPWAFDRSLVHLGGKIGVVEKVGGSNENDWIGPILRIRVRLRLDRPLRRGFHMQDDDGNDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGASSSGVGEDQYGEWLRVGAFLGESIRRDLDQGGVKDSWKQSVVAPKPVSGEAEICMVEGGKEARVEGSEKGKQRVGHGASEPWYTYVEGEAMVVDKVDMVQGREDPPRTLDFLECVSTPMTLYRSSTRQLAIPSSVTGVHQYTMI

Homology

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BLAST of Spg028425 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 188.7 bits (478), Expect = 8.5e-44
Identity = 92/225 (40.89%), Postives = 130/225 (57.78%), Query Frame = 0


Query: 43  EEAEVVRPGAVPSSLPATDLDLCVVGKVLSSKQVNPEAFRNVMRSAWRVHNATRVEPAGE 102
           +E E V        L A ++ LCVV K+ +SK+++ EA R+VM+S WRVHN+TR EP G 
Sbjct: 16  DENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGM 75

Query: 103 NIFVIQFRTRGEKSRVLGTGPWAFDRSL-------------------------VH----- 162
           NI+VI F++  EKSRVL +GPW F++SL                         +H     
Sbjct: 76  NIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFE 135

Query: 163 ---------LGGKIGVVEKVGGSNENDWIGPILRIRVRLRLDRPLRRGFHMQDDDGNDSW 222
                    LG K+G VE++ G   + W GP +R+RV++ + +PLRRG  +++ DG D W
Sbjct: 136 CISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDGKDIW 195

Query: 223 CPVLYERLPDFCFGCGCLGHSRRECEGVGASSSGVGEDQYGEWLR 229
           CP+ YE+LPDFC+ CG +GHS RECE      +    +QYG+WLR
Sbjct: 196 CPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLR 240

[Close]

BLAST of Spg028425 vs. NCBI nr
Match: XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 3.0e-41
Identity = 88/221 (39.82%), Postives = 124/221 (56.11%), Query Frame = 0


Query: 29  MDDLVKKGKSW-LIGEEAEVVRPGAVPSSLPATDLDLCVVGKVLSSKQVNPEAFRNVMRS 88
           MDD+ K  +++ LI EE + +        L   ++ LC VGK+  SK++  EAF +VM+ 
Sbjct: 1   MDDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQ 60

Query: 89  AWRVHNATRVEPAGENIFVIQFRTRGEKSRVLGTGPWAFDRSLV---------------- 148
            W++HN+TR+E AG NI+VI F+T  EK RV   GPW FD+SL+                
Sbjct: 61  VWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDI 120

Query: 149 -----------------------HLGGKIGVVEKVGGSNENDWIGPILRIRVRLRLDRPL 208
                                   LG ++G VE+V G +  DW+ P L +RV++ + +PL
Sbjct: 121 SLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPL 180

Query: 209 RRGFHMQDDDGNDSWCPVLYERLPDFCFGCGCLGHSRRECE 210
           RRG  ++  DG D WCP+ YERLPDFC+GCGC+GHS RE E
Sbjct: 181 RRGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIREYE 221

[Close]

BLAST of Spg028425 vs. NCBI nr
Match: TXG51459.1 (hypothetical protein EZV62_023983 [Acer yangbiense])

HSP 1 Score: 133.7 bits (335), Expect = 3.2e-27
Identity = 70/211 (33.18%), Postives = 116/211 (54.98%), Query Frame = 0


Query: 61  DLDLCVVGKVLSSKQVNPEAFRNVMRSAWRVHNATRVEPAGENIFVIQFRTRGEKSRVLG 120
           ++DLC+VGK+LSSK+VN EAF+N++   W    +  +E  G NIF+  F  + E++R+  
Sbjct: 36  EVDLCLVGKILSSKRVNREAFKNLIEQLWSPFGSVEIESMGLNIFMFHFNNQVERNRIWQ 95

Query: 121 TGPWAFDRSLVHLGGKIGVVEKVGGSNENDWIGPILRIRVRLRLDRPLRRGFHMQ-DDDG 180
            GPW FD+SL+ L    G V  +   +++ W G  ++++V++ + +PL+R   ++ D   
Sbjct: 96  RGPWYFDKSLIVLEKPEGCVIDIPTESKDCW-GKFMKVKVQIDISKPLKRWLRLKLDKSN 155

Query: 181 NDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGASSSGV-GED-QYGEWLRVGAFLGESI 240
           N     + YERLP FC+ CG +GH+ + C    A    + GE  +YG W+R      + +
Sbjct: 156 NIVMVSLKYERLPKFCYVCGRIGHASKNCSDEEAKIEALKGESTKYGSWMRASVPDRKKV 215

Query: 241 RRDLDQGGVKDSWKQSVVAPKPVSGEAEICM 269
           R D     +K   K      +  SG  E+C+
Sbjct: 216 RIDHQ---IKGHSKVQSRGLEERSGVNEVCL 242

[Close]

BLAST of Spg028425 vs. NCBI nr
Match: XP_035547259.1 (uncharacterized protein LOC118348856 [Juglans regia])

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-26
Identity = 71/202 (35.15%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 53  VPSSLPATDL---DLCVVGKVLSSKQVNPEAFRNVMRSAWRVHNATRVEPAGENIFVIQF 112
           V SSL  +++   + C+V  +L+ +  N EA +N+MR  W+       +  G N+F+++F
Sbjct: 24  VESSLLESNITRGERCLVMSLLTDRYYNREALKNMMRKVWQPACKVPFKDLGSNLFLVEF 83

Query: 113 RTRGEKSRVLGTGPWAFDRSLVHL-------------GGKIGVVEKVGGSNENDWIGPIL 172
               +K R+L  GPW+FD  LV L             G KIG+VE+V G       G  L
Sbjct: 84  EDDRDKQRILWEGPWSFDCYLVLLKQLEGNYKGGRLIGNKIGIVEEVDGEQSEVAWGEYL 143

Query: 173 RIRVRLRLDRPLRRGFHMQDDDGNDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGASSS 232
           RIRVR+ + +PL RG  ++       W    YERLP+FC+ CG LGH +++CE +  +  
Sbjct: 144 RIRVRVNISQPLMRGITVKLGQFGSVWIRFAYERLPNFCYMCGKLGHQQKDCE-INGTQG 203

Query: 233 GVGEDQ--YGEWLRVGAFLGES 237
               DQ  +G WL VG  +G +
Sbjct: 204 ARDTDQLPFGPWLHVGTTMGRA 224

[Close]

BLAST of Spg028425 vs. NCBI nr
Match: TXG48734.1 (hypothetical protein EZV62_024609 [Acer yangbiense])

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-26
Identity = 70/180 (38.89%), Postives = 99/180 (55.00%), Query Frame = 0


Query: 62  LDLCVVGKVLSSKQVNPEAFRNVMRSAWRVHNATRVEPAGENIFVIQFRTRGEKSRVLGT 121
           L LC+VGKVL++K +N E F+ V+   W+V  +  +E   EN+F+  F+ + ++ RVL  
Sbjct: 37  LSLCLVGKVLANKLINREVFKRVLLRIWKVRESITIEMVRENVFMFHFQNQEDRQRVLTG 96

Query: 122 GPWAFDRSLV----------HLGGKIGVVEKVGGSNENDWIGPILRIRVRLRLDRPLRRG 181
           GPW+FD  L+           LG  IG VE++      D  G  +R+RV + +D+PLRR 
Sbjct: 97  GPWSFDNFLIVLDEPNWKGYFLGSLIGDVEELDEGAYGDCDGKFIRVRVIINVDQPLRRI 156

Query: 182 FHMQD-DDGNDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGASSSGVGEDQYGEWLRVG 231
             +    DG +S   + YERL D C  CG LGH   EC   GASS    E  +G WL+ G
Sbjct: 157 LRVDVLGDGEESVMLLRYERLSDHCHKCGKLGHKMIECTTAGASS----ELLFGAWLKAG 212

[Close]

BLAST of Spg028425 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.1e-44
Identity = 92/225 (40.89%), Postives = 130/225 (57.78%), Query Frame = 0


Query: 43  EEAEVVRPGAVPSSLPATDLDLCVVGKVLSSKQVNPEAFRNVMRSAWRVHNATRVEPAGE 102
           +E E V        L A ++ LCVV K+ +SK+++ EA R+VM+S WRVHN+TR EP G 
Sbjct: 16  DENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGM 75

Query: 103 NIFVIQFRTRGEKSRVLGTGPWAFDRSL-------------------------VH----- 162
           NI+VI F++  EKSRVL +GPW F++SL                         +H     
Sbjct: 76  NIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFE 135

Query: 163 ---------LGGKIGVVEKVGGSNENDWIGPILRIRVRLRLDRPLRRGFHMQDDDGNDSW 222
                    LG K+G VE++ G   + W GP +R+RV++ + +PLRRG  +++ DG D W
Sbjct: 136 CISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDGKDIW 195

Query: 223 CPVLYERLPDFCFGCGCLGHSRRECEGVGASSSGVGEDQYGEWLR 229
           CP+ YE+LPDFC+ CG +GHS RECE      +    +QYG+WLR
Sbjct: 196 CPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLR 240

[Close]

BLAST of Spg028425 vs. ExPASy TrEMBL
Match: A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-41
Identity = 88/221 (39.82%), Postives = 124/221 (56.11%), Query Frame = 0


Query: 29  MDDLVKKGKSW-LIGEEAEVVRPGAVPSSLPATDLDLCVVGKVLSSKQVNPEAFRNVMRS 88
           MDD+ K  +++ LI EE + +        L   ++ LC VGK+  SK++  EAF +VM+ 
Sbjct: 1   MDDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQ 60

Query: 89  AWRVHNATRVEPAGENIFVIQFRTRGEKSRVLGTGPWAFDRSLV---------------- 148
            W++HN+TR+E AG NI+VI F+T  EK RV   GPW FD+SL+                
Sbjct: 61  VWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDI 120

Query: 149 -----------------------HLGGKIGVVEKVGGSNENDWIGPILRIRVRLRLDRPL 208
                                   LG ++G VE+V G +  DW+ P L +RV++ + +PL
Sbjct: 121 SLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPL 180

Query: 209 RRGFHMQDDDGNDSWCPVLYERLPDFCFGCGCLGHSRRECE 210
           RRG  ++  DG D WCP+ YERLPDFC+GCGC+GHS RE E
Sbjct: 181 RRGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIREYE 221

[Close]

BLAST of Spg028425 vs. ExPASy TrEMBL
Match: A0A5C7H421 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_023983 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-27
Identity = 70/211 (33.18%), Postives = 116/211 (54.98%), Query Frame = 0


Query: 61  DLDLCVVGKVLSSKQVNPEAFRNVMRSAWRVHNATRVEPAGENIFVIQFRTRGEKSRVLG 120
           ++DLC+VGK+LSSK+VN EAF+N++   W    +  +E  G NIF+  F  + E++R+  
Sbjct: 36  EVDLCLVGKILSSKRVNREAFKNLIEQLWSPFGSVEIESMGLNIFMFHFNNQVERNRIWQ 95

Query: 121 TGPWAFDRSLVHLGGKIGVVEKVGGSNENDWIGPILRIRVRLRLDRPLRRGFHMQ-DDDG 180
            GPW FD+SL+ L    G V  +   +++ W G  ++++V++ + +PL+R   ++ D   
Sbjct: 96  RGPWYFDKSLIVLEKPEGCVIDIPTESKDCW-GKFMKVKVQIDISKPLKRWLRLKLDKSN 155

Query: 181 NDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGASSSGV-GED-QYGEWLRVGAFLGESI 240
           N     + YERLP FC+ CG +GH+ + C    A    + GE  +YG W+R      + +
Sbjct: 156 NIVMVSLKYERLPKFCYVCGRIGHASKNCSDEEAKIEALKGESTKYGSWMRASVPDRKKV 215

Query: 241 RRDLDQGGVKDSWKQSVVAPKPVSGEAEICM 269
           R D     +K   K      +  SG  E+C+
Sbjct: 216 RIDHQ---IKGHSKVQSRGLEERSGVNEVCL 242

[Close]

BLAST of Spg028425 vs. ExPASy TrEMBL
Match: A0A6P9EID8 (uncharacterized protein LOC118348856 OS=Juglans regia OX=51240 GN=LOC118348856 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.8e-27
Identity = 71/202 (35.15%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 53  VPSSLPATDL---DLCVVGKVLSSKQVNPEAFRNVMRSAWRVHNATRVEPAGENIFVIQF 112
           V SSL  +++   + C+V  +L+ +  N EA +N+MR  W+       +  G N+F+++F
Sbjct: 24  VESSLLESNITRGERCLVMSLLTDRYYNREALKNMMRKVWQPACKVPFKDLGSNLFLVEF 83

Query: 113 RTRGEKSRVLGTGPWAFDRSLVHL-------------GGKIGVVEKVGGSNENDWIGPIL 172
               +K R+L  GPW+FD  LV L             G KIG+VE+V G       G  L
Sbjct: 84  EDDRDKQRILWEGPWSFDCYLVLLKQLEGNYKGGRLIGNKIGIVEEVDGEQSEVAWGEYL 143

Query: 173 RIRVRLRLDRPLRRGFHMQDDDGNDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGASSS 232
           RIRVR+ + +PL RG  ++       W    YERLP+FC+ CG LGH +++CE +  +  
Sbjct: 144 RIRVRVNISQPLMRGITVKLGQFGSVWIRFAYERLPNFCYMCGKLGHQQKDCE-INGTQG 203

Query: 233 GVGEDQ--YGEWLRVGAFLGES 237
               DQ  +G WL VG  +G +
Sbjct: 204 ARDTDQLPFGPWLHVGTTMGRA 224

[Close]

BLAST of Spg028425 vs. ExPASy TrEMBL
Match: A0A5C7GVA6 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024609 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-26
Identity = 70/180 (38.89%), Postives = 99/180 (55.00%), Query Frame = 0


Query: 62  LDLCVVGKVLSSKQVNPEAFRNVMRSAWRVHNATRVEPAGENIFVIQFRTRGEKSRVLGT 121
           L LC+VGKVL++K +N E F+ V+   W+V  +  +E   EN+F+  F+ + ++ RVL  
Sbjct: 37  LSLCLVGKVLANKLINREVFKRVLLRIWKVRESITIEMVRENVFMFHFQNQEDRQRVLTG 96

Query: 122 GPWAFDRSLV----------HLGGKIGVVEKVGGSNENDWIGPILRIRVRLRLDRPLRRG 181
           GPW+FD  L+           LG  IG VE++      D  G  +R+RV + +D+PLRR 
Sbjct: 97  GPWSFDNFLIVLDEPNWKGYFLGSLIGDVEELDEGAYGDCDGKFIRVRVIINVDQPLRRI 156

Query: 182 FHMQD-DDGNDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGASSSGVGEDQYGEWLRVG 231
             +    DG +S   + YERL D C  CG LGH   EC   GASS    E  +G WL+ G
Sbjct: 157 LRVDVLGDGEESVMLLRYERLSDHCHKCGKLGHKMIECTTAGASS----ELLFGAWLKAG 212

The following BLAST results are available for this feature:

BLAST of Spg028425 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149484.1	8.5e-44	40.89	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
XP_022156711.1	3.0e-41	39.82	uncharacterized protein LOC111023555 [Momordica charantia]	[more]
TXG51459.1	3.2e-27	33.18	hypothetical protein EZV62_023983 [Acer yangbiense]	[more]
XP_035547259.1	1.6e-26	35.15	uncharacterized protein LOC118348856 [Juglans regia]	[more]
TXG48734.1	2.1e-26	38.89	hypothetical protein EZV62_024609 [Acer yangbiense]	[more]

BLAST of Spg028425 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg028425 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D765	4.1e-44	40.89	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DVS4	1.5e-41	39.82	uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5C7H421	1.6e-27	33.18	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02398...	[more]
A0A6P9EID8	7.8e-27	35.15	uncharacterized protein LOC118348856 OS=Juglans regia OX=51240 GN=LOC118348856 P...	[more]
A0A5C7GVA6	1.0e-26	38.89	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02460...	[more]

BLAST of Spg028425 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 166..209 e-value: 2.5E-14 score: 52.7
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 61..133 e-value: 7.5E-9 score: 35.3
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 153..210
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 153..210
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 195..208 score: 8.795613

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028425.1	Spg028425.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding