Spg028418 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg028418
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description40S ribosomal protein S4
Locationscaffold7: 10739653 .. 10742258 (+)
RNA-Seq ExpressionSpg028418
SyntenySpg028418
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAGTGGATCGCTTTACAAACTCTTTTCTCATTTGCTTCATATCTCCATTGACGTTCTCGGTTACGGTGTTCTACATCGTTGTTTCCATCTTCATTTGGAACTTTTTTTTGTTGTGTTTGTAGAATTTTAGGCAACTGTGTCTGTATTAGGTGATTTGTGAGCCTTATGATTTGTTGGATTGTGATTTTTTAAAGGGTCTCTATTTAAGAGTGATGCTACCACAGTGAAGGGCTTGGCTAATTCGTCCATGATAACACGAACTCTTCCATTCAACTGGTTTTCCTTAGTTTTATATGTTCACATTATTTAGGGTTTTTTTTTTTGGTTTCCCTCTTTTGCTCGTTTGGGTGAGATTTGTTTTTTATATAGGAATTTTGAGCTTGCAAATACCTGTACTACACGAGTTATTTTTCCTGATATGTTTCCTAGAGTATGCGGATGGGTTTGATTTTTCTACTATCCATCATATGTTTTAATTGTGTTGTGTCAGAAGAAAATGCATGGAAGTTATTTAATGGAAAAAGCACAATTAGTTTTGTTGTCCGGCAACCACAGAAATATTCATGGCACGATATTTTCTGCAAGTATGCCAAGTTTATAACTTTGCCTTTGAAATTAATGTTTATGGCTTTGACAGGCAAGAGGATTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGTGAGTGAAATTGATAGTTTCCATTTCAATTTACTTTTTCTTTCTAGCTACGCATTACACTTATATCTGACATTTAGTTCTACCTTTTAAATCACTTTGTAGGCCCCCAAACCTTCATCTGGACCTCATAAATCAAGGGAATGCCTCCCATTGATCCTTATCTTGCGAAACCGGCTGAAATATGCTCTTACATACCGTGAGGTCATTGCAATTTTGATGCAACGACATGTTTTGGTAGATGGGAAGGTGAGGACCGATAAGACGTACCCAGCTGGGTTCATGGGTATGTTGATCTCAGACTTTGTATTTATACTGTGGTTTCAGTTTCACTATTTATGGACCATTGTTTATAAGCTTCACTGTTTCACAGTTTTTATATTATAATAGCTGCCTAAATCGATATTTTTCCTTTGGGAATTGGCTGTTGGTTCTATGAACTGAATTAGGGGAATGTATGGAGTTGTAAGTTGTAACTTGCTTCAATGCTTTCTTCCCAGTTGTGTACGGTGCACTTTTTGTGGCTAATGTTGGTTTGACCCTCATTTTGTTGTATTTCTTTATTTCCAACTCCTCTCCCTATTCTTCTTAATGAAAGTCAGAGGGACGTTCAATCAATTCTTTTACCATAAAAAGTATTGTCCTTAACAAATAGGGTAGCGAGTAGGGAATGCATCTTTAACTTTATCAGCCTGCAAACGAGATAATTTAACGGTAATCTGATATATAATATGTTCCAATTCAACTCATATGGAGGTCATTCTTTTAAACATGGTACTGCTTGGAACTGCTTTGTCTCTTGGTTGCATAATTTTTGTTCTGTTTATTATTTTATTATATACATTTTAAGCACGACATTTCTTTTTGTTTCAGATATTGTGTCCATTCCCAAAACAAACGAGAATTTCCGGCTTCTTTATGACACAAAAGGACGTTTCCGTCTTCACTCAGTCAGGGATGAAGAGGCTAAGGTTAGCTCTACTGTTCTTTCATATTGAACATTGACCTTTTATTTGTTAGAACAATCCTGTTTATATTTCAAAACCATTCTGCATTTTTTCTATGACTTCTGAAAGTCAGCTTTTTTTCCCCTCGATGATTTTCATGTGAGATCCATGAAGGGAAATTGATTTCCTAATCCTCCGGGGTAACAAGTTCGTCTGTTGTTTATGATATATGCAATTGGATGATTCATGTTGACTCTGATATTGTTTTTGCAGTACAAGCTCTGCAAAGTTCGCTCAGTGCAGTTCGGGCAAAAGGGAATCCCATATCTGAACACTTATGATGGACGTACCATACGCTATCCCGACCCCCTGATCAAGGCAAACGACACCATCAAGCTGGACCTCGACTCGAACAAGATTGCTGATTTCATCAAGTTTGATGTCGGAAATGTTGTGATGGTGACTGGTGGAAGGAATCGTGGGCAAGTCGGAGTAATTAAAAACAGGGAGAAGCACAAGGGAAGCTTTGAGACAATCCACATTCAGGATGCAACCGGTCACGAATTTGCGACTCGGCTAGGCAATGTGTTCACAGTTGGGAAGGGGACGAAGCCATGGATATCCCTTCCGAAGGGCAAGGGTATTAAATTATCCATCATTGAAGAGGCCAGGAAGAGGCTTGCCAGCCAAGCAGCAGTAACAGCTTAAGAGGTTGAGTATTGTAGTGATGATTTTAAATCTTTTTTATTTTTATTTTTTTTGACTGATCTGTTTCTGGGATTTTGCTCTTGTTATTGTGGTCGTAGATCTTGAGACATTATTTATTTCTACTAGAAATTTGGTGAGGCCGTTGCTTCTATAATTTTTGTCTTTTAAAAACACTTTGTTATAATGGAATTATCAGTCGTATTTTAGGTATTATATTTTGCACAAGCTTTTCTA

mRNA sequence

ATGGTCAGTGGATCGCTTTACAAACTCTTTTCTCATTTGCTTCATATCTCCATTGACGTTCTCGGTTACGGTGTTCTACATCGTTGGTCTCTATTTAAGAGTGATGCTACCACAGTGAAGGGCTTGGCTAATTCGTCCATGATAACACGAACTCTTCCATTCAACTGGAATTTTGAGCTTGCAAATACCTGTACTACACGAGTTATTTTTCCTGATATGTTTCCTAGAGCAAGAGGATTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCATAAATCAAGGGAATGCCTCCCATTGATCCTTATCTTGCGAAACCGGCTGAAATATGCTCTTACATACCGTGAGGTCATTGCAATTTTGATGCAACGACATGTTTTGGTAGATGGGAAGGTGAGGACCGATAAGACGTACCCAGCTGGGTTCATGGATATTGTGTCCATTCCCAAAACAAACGAGAATTTCCGGCTTCTTTATGACACAAAAGGACGTTTCCGTCTTCACTCAGTCAGGGATGAAGAGGCTAAGTACAAGCTCTGCAAAGTTCGCTCAGTGCAGTTCGGGCAAAAGGGAATCCCATATCTGAACACTTATGATGGACGTACCATACGCTATCCCGACCCCCTGATCAAGGCAAACGACACCATCAAGCTGGACCTCGACTCGAACAAGATTGCTGATTTCATCAAGTTTGATGTCGGAAATGTTGTGATGGTGACTGGTGGAAGGAATCGTGGGCAAGTCGGAGTAATTAAAAACAGGGAGAAGCACAAGGGAAGCTTTGAGACAATCCACATTCAGGATGCAACCGGTCACGAATTTGCGACTCGGCTAGGCAATGTGTTCACAGTTGGGAAGGGGACGAAGCCATGGATATCCCTTCCGAAGGGCAAGGGTATTAAATTATCCATCATTGAAGAGGCCAGGAAGAGGCTTGCCAGCCAAGCAGCAGTAACAGCTTAA

Coding sequence (CDS)

ATGGTCAGTGGATCGCTTTACAAACTCTTTTCTCATTTGCTTCATATCTCCATTGACGTTCTCGGTTACGGTGTTCTACATCGTTGGTCTCTATTTAAGAGTGATGCTACCACAGTGAAGGGCTTGGCTAATTCGTCCATGATAACACGAACTCTTCCATTCAACTGGAATTTTGAGCTTGCAAATACCTGTACTACACGAGTTATTTTTCCTGATATGTTTCCTAGAGCAAGAGGATTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCATAAATCAAGGGAATGCCTCCCATTGATCCTTATCTTGCGAAACCGGCTGAAATATGCTCTTACATACCGTGAGGTCATTGCAATTTTGATGCAACGACATGTTTTGGTAGATGGGAAGGTGAGGACCGATAAGACGTACCCAGCTGGGTTCATGGATATTGTGTCCATTCCCAAAACAAACGAGAATTTCCGGCTTCTTTATGACACAAAAGGACGTTTCCGTCTTCACTCAGTCAGGGATGAAGAGGCTAAGTACAAGCTCTGCAAAGTTCGCTCAGTGCAGTTCGGGCAAAAGGGAATCCCATATCTGAACACTTATGATGGACGTACCATACGCTATCCCGACCCCCTGATCAAGGCAAACGACACCATCAAGCTGGACCTCGACTCGAACAAGATTGCTGATTTCATCAAGTTTGATGTCGGAAATGTTGTGATGGTGACTGGTGGAAGGAATCGTGGGCAAGTCGGAGTAATTAAAAACAGGGAGAAGCACAAGGGAAGCTTTGAGACAATCCACATTCAGGATGCAACCGGTCACGAATTTGCGACTCGGCTAGGCAATGTGTTCACAGTTGGGAAGGGGACGAAGCCATGGATATCCCTTCCGAAGGGCAAGGGTATTAAATTATCCATCATTGAAGAGGCCAGGAAGAGGCTTGCCAGCCAAGCAGCAGTAACAGCTTAA

Protein sequence

MVSGSLYKLFSHLLHISIDVLGYGVLHRWSLFKSDATTVKGLANSSMITRTLPFNWNFELANTCTTRVIFPDMFPRARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKGKGIKLSIIEEARKRLASQAAVTA
Homology
[Close]
BLAST of Spg028418 vs. NCBI nr
Match: XP_022132117.1 (40S ribosomal protein S4-3 [Momordica charantia])

HSP 1 Score: 530.0 bits (1364), Expect = 1.5e-146
Identity = 259/263 (98.48%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           IAILMQRHVLVDGKVRTDKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAAVTA 340
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Spg028418 vs. NCBI nr
Match: XP_038899765.1 (40S ribosomal protein S4-3-like [Benincasa hispida])

HSP 1 Score: 528.5 bits (1360), Expect = 4.3e-146
Identity = 258/263 (98.10%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           IAILMQRHVLVDGKVRTDKT+PAGFMD+VSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAAVTA 340
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Spg028418 vs. NCBI nr
Match: XP_022146851.1 (40S ribosomal protein S4-3-like [Momordica charantia])

HSP 1 Score: 527.3 bits (1357), Expect = 9.6e-146
Identity = 257/263 (97.72%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           IAILMQRHVLVD KVRTDKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAAVTA 340
           KG+KLSIIEEARKRLASQAAVTA
Sbjct: 242 KGVKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Spg028418 vs. NCBI nr
Match: TYK04363.1 (40S ribosomal protein S4-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 526.9 bits (1356), Expect = 1.3e-145
Identity = 257/265 (96.98%), Postives = 264/265 (99.62%), Query Frame = 0 

Query: 75  PRARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 134
           P ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR
Sbjct: 10  PSARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 69

Query: 135 EVIAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEA 194
           EVIAILMQRHVLVDGKVRTDKT+PAGFMDI+SIPKTNENFRLLYDTKGRFRLHSVRDEEA
Sbjct: 70  EVIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEA 129

Query: 195 KYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGN 254
           KYKLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGN
Sbjct: 130 KYKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGN 189

Query: 255 VVMVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLP 314
           VVMVTGGRNRG+VGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPW+SLP
Sbjct: 190 VVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLP 249

Query: 315 KGKGIKLSIIEEARKRLASQAAVTA 340
           KGKGIKLSIIEEARKRLASQAAVTA
Sbjct: 250 KGKGIKLSIIEEARKRLASQAAVTA 274

[Close]
BLAST of Spg028418 vs. NCBI nr
Match: XP_038900121.1 (40S ribosomal protein S4-3 [Benincasa hispida])

HSP 1 Score: 526.9 bits (1356), Expect = 1.3e-145
Identity = 257/263 (97.72%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           IAILMQRHVLVDGKVRTDKT+PAGFMD+VSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAAVTA 340
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Spg028418 vs. ExPASy Swiss-Prot
Match: Q8VYK6 (40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2)

HSP 1 Score: 503.8 bits (1296), Expect = 1.5e-141
Identity = 238/260 (91.54%), Postives = 256/260 (98.46%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           I+ILMQRH+ VDGKVRTDKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAA 337
           KGIKL+IIEEARKRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Spg028418 vs. ExPASy Swiss-Prot
Match: P49204 (40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4)

HSP 1 Score: 503.4 bits (1295), Expect = 1.9e-141
Identity = 238/260 (91.54%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           I+ILMQRH+ VDGKVRTDKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAA 337
           KGIKL+IIEEARKRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Spg028418 vs. ExPASy Swiss-Prot
Match: P46300 (40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 3.3e-141
Identity = 239/263 (90.87%), Postives = 258/263 (98.10%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           I+ILMQR V+VDGKVRTDKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHS+RDEE+K+
Sbjct: 62  ISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKF 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAAVTA 340
           KGIKL+IIE+ARKRLA+Q+A  A
Sbjct: 242 KGIKLTIIEDARKRLAAQSATPA 264

[Close]
BLAST of Spg028418 vs. ExPASy Swiss-Prot
Match: Q93VH9 (40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 9.6e-141
Identity = 236/260 (90.77%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           I+ILMQRH+ VDGKVRTDKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAA 337
           KGIKL+IIEEARKRL++Q A
Sbjct: 242 KGIKLTIIEEARKRLSAQQA 261

[Close]
BLAST of Spg028418 vs. ExPASy Swiss-Prot
Match: P46299 (40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 4.1e-139
Identity = 238/260 (91.54%), Postives = 252/260 (96.92%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           IAILMQRHV+VDGKVRTDKTYPAGFMD+VSIPKTNE+FRLLYDTKGRF LH++  +E K+
Sbjct: 62  IAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETKF 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIH+QDA GHEFATRLGNVFT+GKGTKPW+SLPK 
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKR 241

Query: 317 KGIKLSIIEEARKRLASQAA 337
           KGIKLSIIEEARKRLA+Q A
Sbjct: 242 KGIKLSIIEEARKRLAAQNA 261

[Close]
BLAST of Spg028418 vs. ExPASy TrEMBL
Match: A0A6J1BSY6 (40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111005064 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 7.2e-147
Identity = 259/263 (98.48%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           IAILMQRHVLVDGKVRTDKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAAVTA 340
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Spg028418 vs. ExPASy TrEMBL
Match: A0A6J1D0L7 (40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111015952 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 4.6e-146
Identity = 257/263 (97.72%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           IAILMQRHVLVD KVRTDKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAAVTA 340
           KG+KLSIIEEARKRLASQAAVTA
Sbjct: 242 KGVKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Spg028418 vs. ExPASy TrEMBL
Match: A0A5D3BXA6 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00330 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 6.1e-146
Identity = 257/265 (96.98%), Postives = 264/265 (99.62%), Query Frame = 0 

Query: 75  PRARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 134
           P ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR
Sbjct: 10  PSARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYR 69

Query: 135 EVIAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEA 194
           EVIAILMQRHVLVDGKVRTDKT+PAGFMDI+SIPKTNENFRLLYDTKGRFRLHSVRDEEA
Sbjct: 70  EVIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEA 129

Query: 195 KYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGN 254
           KYKLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGN
Sbjct: 130 KYKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGN 189

Query: 255 VVMVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLP 314
           VVMVTGGRNRG+VGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPW+SLP
Sbjct: 190 VVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLP 249

Query: 315 KGKGIKLSIIEEARKRLASQAAVTA 340
           KGKGIKLSIIEEARKRLASQAAVTA
Sbjct: 250 KGKGIKLSIIEEARKRLASQAAVTA 274

[Close]
BLAST of Spg028418 vs. ExPASy TrEMBL
Match: A0A0A0K4K7 (40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.8e-145
Identity = 257/263 (97.72%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           IAILMQRHVLVDGKVRTDKT+PAGFMD+VSIPKT+ENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAAVTA 340
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Spg028418 vs. ExPASy TrEMBL
Match: A0A5A7V1R9 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00160 PE=3 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 2.3e-145
Identity = 256/263 (97.34%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 16  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 75

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           IAILMQRHVLVDGKVRTDKT+PAGFMD+VSIPKT+ENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 76  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 135

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 136 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 195

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPW+SLPKG
Sbjct: 196 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 255

Query: 317 KGIKLSIIEEARKRLASQAAVTA 340
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 256 KGIKLSIIEEARKRLASQAAVTA 278

[Close]
BLAST of Spg028418 vs. TAIR 10
Match: AT5G58420.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 503.8 bits (1296), Expect = 1.1e-142
Identity = 238/260 (91.54%), Postives = 256/260 (98.46%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           I+ILMQRH+ VDGKVRTDKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAA 337
           KGIKL+IIEEARKRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Spg028418 vs. TAIR 10
Match: AT5G07090.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 503.4 bits (1295), Expect = 1.4e-142
Identity = 238/260 (91.54%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           I+ILMQRH+ VDGKVRTDKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAA 337
           KGIKL+IIEEARKRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Spg028418 vs. TAIR 10
Match: AT2G17360.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 501.1 bits (1289), Expect = 6.9e-142
Identity = 236/260 (90.77%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           I+ILMQRH+ VDGKVRTDKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 257 MVTGGRNRGQVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKG 316
           MVTGGRNRG+VGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPW+SLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 317 KGIKLSIIEEARKRLASQAA 337
           KGIKL+IIEEARKRL++Q A
Sbjct: 242 KGIKLTIIEEARKRLSAQQA 261

[Close]
BLAST of Spg028418 vs. TAIR 10
Match: AT5G07090.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 466.1 bits (1198), Expect = 2.4e-131
Identity = 221/243 (90.95%), Postives = 238/243 (97.94%), Query Frame = 0 

Query: 94  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 153
           MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 1   MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60

Query: 154 DKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPY 213
           DKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPY
Sbjct: 61  DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120

Query: 214 LNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGQVGVIKNR 273
           LNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRG+VGVIKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180

Query: 274 EKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWISLPKGKGIKLSIIEEARKRLAS 333
           EKHKGSFETIHIQD+TGHEFATRLGNV+T+GKGTKPW+SLPKGKGIKL+IIEEARKRLAS
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240

Query: 334 QAA 337
           Q A
Sbjct: 241 QQA 243

[Close]
BLAST of Spg028418 vs. TAIR 10
Match: AT2G17360.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 349.4 bits (895), Expect = 3.3e-96
Identity = 163/180 (90.56%), Postives = 174/180 (96.67%), Query Frame = 0 

Query: 77  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 136
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 137 IAILMQRHVLVDGKVRTDKTYPAGFMDIVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 196
           I+ILMQRH+ VDGKVRTDKTYPAGFMD+VSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 197 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 256
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVG  V
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKCV 181

The following BLAST results are available for this feature:
BLAST of Spg028418 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022132117.11.5e-14698.4840S ribosomal protein S4-3 [Momordica charantia][more]
XP_038899765.14.3e-14698.1040S ribosomal protein S4-3-like [Benincasa hispida][more]
XP_022146851.19.6e-14697.7240S ribosomal protein S4-3-like [Momordica charantia][more]
TYK04363.11.3e-14596.9840S ribosomal protein S4-3-like [Cucumis melo var. makuwa][more]
XP_038900121.11.3e-14597.7240S ribosomal protein S4-3 [Benincasa hispida][more]
BLAST of Spg028418 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VYK61.5e-14191.5440S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2[more]
P492041.9e-14191.5440S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4[more]
P463003.3e-14190.8740S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1[more]
Q93VH99.6e-14190.7740S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1[more]
P462994.1e-13991.5440S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1[more]
BLAST of Spg028418 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BSY67.2e-14798.4840S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111005064 PE=3 SV=... [more]
A0A6J1D0L74.6e-14697.7240S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111015952 PE=3 SV=... [more]
A0A5D3BXA66.1e-14696.9840S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A0A0K4K71.8e-14597.7240S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1[more]
A0A5A7V1R92.3e-14597.3440S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
BLAST of Spg028418 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G58420.11.1e-14291.54Ribosomal protein S4 (RPS4A) family protein [more]
AT5G07090.11.4e-14291.54Ribosomal protein S4 (RPS4A) family protein [more]
AT2G17360.16.9e-14290.77Ribosomal protein S4 (RPS4A) family protein [more]
AT5G07090.22.4e-13190.95Ribosomal protein S4 (RPS4A) family protein [more]
AT2G17360.23.3e-9690.56Ribosomal protein S4 (RPS4A) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 117..181
e-value: 3.7E-5
score: 33.2
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 122..165
e-value: 9.1E-7
score: 28.5
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 126..187
e-value: 2.49506E-6
score: 42.6218
IPR005824KOWSMARTSM00739kow_9coord: 249..276
e-value: 6.9E-4
score: 28.9
IPR005824KOWPFAMPF00467KOWcoord: 252..285
e-value: 2.0E-6
score: 27.5
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 250..320
e-value: 3.4E-38
score: 131.4
IPR03227740S ribosomal protein S4, C-terminal domainPFAMPF1612140S_S4_Ccoord: 287..333
e-value: 3.3E-25
score: 87.5
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 76..192
e-value: 4.6E-60
score: 202.7
IPR013845Ribosomal protein S4e, central regionPFAMPF00900Ribosomal_S4ecoord: 170..244
e-value: 2.2E-35
score: 120.3
IPR038237Ribosomal protein S4e, central domain superfamilyGENE3D2.40.50.740coord: 197..247
e-value: 1.6E-30
score: 106.6
IPR013843Ribosomal protein S4e, N-terminalPFAMPF08071RS4NTcoord: 78..114
e-value: 5.9E-19
score: 67.9
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 296..339
coord: 75..295
IPR000876Ribosomal protein S4eHAMAPMF_00485Ribosomal_S4ecoord: 82..313
score: 36.322437
NoneNo IPR availablePANTHERPTHR11581:SF3340S RIBOSOMAL PROTEIN S4coord: 296..339
coord: 75..295
NoneNo IPR availablePROSITEPS50889S4coord: 117..179
score: 9.160079
IPR018199Ribosomal protein S4e, N-terminal, conserved sitePROSITEPS00528RIBOSOMAL_S4Ecoord: 83..97
IPR041982Ribosomal protein S4, KOW domainCDDcd06087KOW_RPS4coord: 250..304
e-value: 5.30299E-29
score: 104.135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg028418.1Spg028418.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding