Spg028256 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028256
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Fanconi-associated nuclease
Location	scaffold8: 24798737 .. 24800341 (+)
RNA-Seq Expression	Spg028256
Synteny	Spg028256

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAAACAAGAGGAAGAAAAGAGAGAGAAGTGGAGGAGGACATACCTGTTATGCCTGAAGCTTCTGAGAAGAAGGCAAAAAAGAAAAGAACACTTGCAGAAAGGGAAGCCAAGCGGCTTAGAAGACTACAAGAGGCTGAAGTTTCTGAAGTACTGCAAAAGGTCATCGAGGACATTGCAGAAGAGGTAGTCACTGAGGAAGAACCAAAAGATCCCGAAAAAGAAAAAGATCCGGAAAAGACTGTTGAAACAGAGAAAGAGATACAAGAAAAGGCAGCCAAGGATATGCAAATGCAAGGTAATCATGAAACAGAAGTTCAAGAGGTTCAGGAAGAGGTAGTGCAGGATCCGCCGCGTCATCGCCGCCACAAGCAGAAAGCGGGACGGATTAAAAGGATTTAGACCGACACTCCATCTCCACCCACAACTGAATCGGAAAAAGAGGAACCTGAAGATCAAGAAGAAGCTGAGAAGGAAGCTGTAGAAGATGAAACTGAAAAGAAGACTCATGAAAATAAGGGCAAAGGTATTGCAGGGGCAGAAGTTGAAGCAGAAGTGGCAGGACCAGAGAAAAGGAGGTTGCCGTATGAGCGCTTTATCAATCATTTTCCCCGTGCAAAATATATAGATATGCTGAAGAGAGACTTTTTGTTCGAGAGGGGGTTTAGTGGTGACCTTCCACACTTTTTAAGGGCCGACATCACAAACCATGGTTGGGAGTTGTTCTGCTCTAAGTCGGAACATGTGAACTCACAAGTGGTGCGCGAGTTTTACGCAAATATCGACGAGGAAGAAGGTTTTCAAGTGATTGTTCGTGGAGTAGCTGTCGATTGGAGTCCCAGAGCCATTAATTCACTGAACAATCTTCAAGATTTCTCTCATGCTGGTTATAACGAGATGGCGGTAGCGCCATCTAACGAGCAGTTGAATGTCGCTGTTTGGGAAGTAGGAATAGAAGGAGCACAGTGGCGACTTTCGAAAACTGAGAAGAGGACTTTCCAAACCGCTTATCTGAAGAAGGAAGCCAATACTTGGATGAGATTTATCAGGTAGAGACTGCTTCCAACAACTCACGACTCCATAGTCTCTCGGGAAAGAGTTCTTTTAGCTTTTGCAATTTTAAGGTCTCTTAGCATCGACGTGGGTAAGATCATTGCCAGTGAAATTTTTGGATGTCGGCATAAGAAGGTTGGGAAATTGTTCTTTCCGAATACAATCTCAATGCTCTGTAAGAGAGCGGGGGTTCCAGAAAGCATAGAAGATTTGATCCTATTGGACAAGGGAATAATTGACACGCCAAACTTGGCACGGCTTCAACGGGCGCAGGAAACACGTCAAGGGGGGCTAGTCTGTGGCATTCACCAAATCTTAGAACAACTCACACTTTCAGCCAGCAGGCAAGAGTTCGCCGAGAGGCAGGCTCAAACCTATTGGACTTATGTTAAAAGACGTGATGTCGCACTGAGGACGGCACTGCAAGCAAACTTTTCAAAGCCTTATCCAGCCCTTCCTGTATTCCATGATGATTTGCTGAACCCTTGGATCCCACCACCACCCATTGAGAGAGAAGAGGAGGATGATGATGCTGGTCCGGAGGACTAG

mRNA sequence

ATGGCAAAAACAAGAGGAAGAAAAGAGAGAGAAGTGGAGGAGGACATACCTGTTATGCCTGAAGCTTCTGAGAAGAAGGCAAAAAAGAAAAGAACACTTGCAGAAAGGGAAGCCAAGCGGCTTAGAAGACTACAAGAGGCTGAAGTTTCTGAAGTACTGCAAAAGGTCATCGAGGACATTGCAGAAGAGGTAGTCACTGAGGAAGAACCAAAAGATCCCGAAAAAGAAAAAGATCCGGAAAAGACTGTTGAAACAGAGAAAGAGATACAAGAAAAGGCAGCCAAGGATATGCAAATGCAAGGTAATCATGAAACAGAAGTTCAAGAGACCGACACTCCATCTCCACCCACAACTGAATCGGAAAAAGAGGAACCTGAAGATCAAGAAGAAGCTGAGAAGGAAGCTGTAGAAGATGAAACTGAAAAGAAGACTCATGAAAATAAGGGCAAAGGTATTGCAGGGGCAGAAGTTGAAGCAGAAGTGGCAGGACCAGAGAAAAGGAGGTTGCCGTATGAGCGCTTTATCAATCATTTTCCCCGTGCAAAATATATAGATATGCTGAAGAGAGACTTTTTGTTCGAGAGGGGGTTTAGTGGTGACCTTCCACACTTTTTAAGGGCCGACATCACAAACCATGGTTGGGAGTTGTTCTGCTCTAAGTCGGAACATGTGAACTCACAAGTGGTGCGCGAGTTTTACGCAAATATCGACGAGGAAGAAGGTTTTCAAGTGATTGTTCGTGGAGTAGCTGTCGATTGGAGTCCCAGAGCCATTAATTCACTGAACAATCTTCAAGATTTCTCTCATGCTGGTTATAACGAGATGGCGGTAGCGCCATCTAACGAGCAGTTGAATGTCGCTGTTTGGGAAGTAGGAATAGAAGGAGCACAGTGGCGACTTTCGAAAACTGAGAAGAGGACTTTCCAAACCGCTTATCTGAAGAAGGAAGCCAATACTTGGATGAGATTTATCAGGTCTCTTAGCATCGACGTGGGTAAGATCATTGCCAGTGAAATTTTTGGATGTCGGCATAAGAAGGTTGGGAAATTGTTCTTTCCGAATACAATCTCAATGCTCTGTAAGAGAGCGGGGGTTCCAGAAAGCATAGAAGATTTGATCCTATTGGACAAGGGAATAATTGACACGCCAAACTTGGCACGGCTTCAACGGGCGCAGGAAACACGTCAAGGGGGGCTAGTCTGTGGCATTCACCAAATCTTAGAACAACTCACACTTTCAGCCAGCAGGCAAGAGTTCGCCGAGAGGCAGGCTCAAACCTATTGGACTTATGTTAAAAGACGTGATGTCGCACTGAGGACGGCACTGCAAGCAAACTTTTCAAAGCCTTATCCAGCCCTTCCTGTATTCCATGATGATTTGCTGAACCCTTGGATCCCACCACCACCCATTGAGAGAGAAGAGGAGGATGATGATGCTGGTCCGGAGGACTAG

Coding sequence (CDS)

ATGGCAAAAACAAGAGGAAGAAAAGAGAGAGAAGTGGAGGAGGACATACCTGTTATGCCTGAAGCTTCTGAGAAGAAGGCAAAAAAGAAAAGAACACTTGCAGAAAGGGAAGCCAAGCGGCTTAGAAGACTACAAGAGGCTGAAGTTTCTGAAGTACTGCAAAAGGTCATCGAGGACATTGCAGAAGAGGTAGTCACTGAGGAAGAACCAAAAGATCCCGAAAAAGAAAAAGATCCGGAAAAGACTGTTGAAACAGAGAAAGAGATACAAGAAAAGGCAGCCAAGGATATGCAAATGCAAGGTAATCATGAAACAGAAGTTCAAGAGACCGACACTCCATCTCCACCCACAACTGAATCGGAAAAAGAGGAACCTGAAGATCAAGAAGAAGCTGAGAAGGAAGCTGTAGAAGATGAAACTGAAAAGAAGACTCATGAAAATAAGGGCAAAGGTATTGCAGGGGCAGAAGTTGAAGCAGAAGTGGCAGGACCAGAGAAAAGGAGGTTGCCGTATGAGCGCTTTATCAATCATTTTCCCCGTGCAAAATATATAGATATGCTGAAGAGAGACTTTTTGTTCGAGAGGGGGTTTAGTGGTGACCTTCCACACTTTTTAAGGGCCGACATCACAAACCATGGTTGGGAGTTGTTCTGCTCTAAGTCGGAACATGTGAACTCACAAGTGGTGCGCGAGTTTTACGCAAATATCGACGAGGAAGAAGGTTTTCAAGTGATTGTTCGTGGAGTAGCTGTCGATTGGAGTCCCAGAGCCATTAATTCACTGAACAATCTTCAAGATTTCTCTCATGCTGGTTATAACGAGATGGCGGTAGCGCCATCTAACGAGCAGTTGAATGTCGCTGTTTGGGAAGTAGGAATAGAAGGAGCACAGTGGCGACTTTCGAAAACTGAGAAGAGGACTTTCCAAACCGCTTATCTGAAGAAGGAAGCCAATACTTGGATGAGATTTATCAGGTCTCTTAGCATCGACGTGGGTAAGATCATTGCCAGTGAAATTTTTGGATGTCGGCATAAGAAGGTTGGGAAATTGTTCTTTCCGAATACAATCTCAATGCTCTGTAAGAGAGCGGGGGTTCCAGAAAGCATAGAAGATTTGATCCTATTGGACAAGGGAATAATTGACACGCCAAACTTGGCACGGCTTCAACGGGCGCAGGAAACACGTCAAGGGGGGCTAGTCTGTGGCATTCACCAAATCTTAGAACAACTCACACTTTCAGCCAGCAGGCAAGAGTTCGCCGAGAGGCAGGCTCAAACCTATTGGACTTATGTTAAAAGACGTGATGTCGCACTGAGGACGGCACTGCAAGCAAACTTTTCAAAGCCTTATCCAGCCCTTCCTGTATTCCATGATGATTTGCTGAACCCTTGGATCCCACCACCACCCATTGAGAGAGAAGAGGAGGATGATGATGCTGGTCCGGAGGACTAG

Protein sequence

MAKTRGRKEREVEEDIPVMPEASEKKAKKKRTLAEREAKRLRRLQEAEVSEVLQKVIEDIAEEVVTEEEPKDPEKEKDPEKTVETEKEIQEKAAKDMQMQGNHETEVQETDTPSPPTTESEKEEPEDQEEAEKEAVEDETEKKTHENKGKGIAGAEVEAEVAGPEKRRLPYERFINHFPRAKYIDMLKRDFLFERGFSGDLPHFLRADITNHGWELFCSKSEHVNSQVVREFYANIDEEEGFQVIVRGVAVDWSPRAINSLNNLQDFSHAGYNEMAVAPSNEQLNVAVWEVGIEGAQWRLSKTEKRTFQTAYLKKEANTWMRFIRSLSIDVGKIIASEIFGCRHKKVGKLFFPNTISMLCKRAGVPESIEDLILLDKGIIDTPNLARLQRAQETRQGGLVCGIHQILEQLTLSASRQEFAERQAQTYWTYVKRRDVALRTALQANFSKPYPALPVFHDDLLNPWIPPPPIEREEEDDDAGPED

Homology

[Close]

BLAST of Spg028256 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 136.0 bits (341), Expect = 8.9e-28
Identity = 102/335 (30.45%), Postives = 144/335 (42.99%), Query Frame = 0


Query: 199 GDLPHFLRADITNHGWELFCSKSEHVNSQVVREFYANIDEEEGFQVIVRGVAVDWSPRAI 258
           G LP F+   IT H W+ FC+  E     +VREFYAN+ + E   V VRGV V WS  AI
Sbjct: 58  GQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAI 117

Query: 259 NSLNNLQDFSHAGYNEMAVAPSNEQLNVAVWEVGIEGAQWRLSKTEKRTFQTAYLKKEAN 318
           N++  L D     ++E     + + L   +  V   GA+W +S     T   + L   A 
Sbjct: 118 NAVFGLGD-PVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAK 177

Query: 319 TWMRFIRS-------------------------LSIDVGKIIASEIFGCRHKKVGKLFFP 378
            W  F++S                          SI+VG++I SEI  C  +K G LFFP
Sbjct: 178 VWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFP 237

Query: 379 NTISMLCKRAGVPESIEDLILLDKGIIDT-----------------PNLARLQRAQETRQ 438
           + I+ LC+ A  P  + +  L + G ID                  P+ +R   A   R 
Sbjct: 238 SLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRT 297

Query: 439 GGLVCGIHQILEQLTLSASRQEF--------AERQAQTYWTYVKRRDVALRTALQANFSK 484
            G +    + LEQ       Q++          +Q Q +W Y K RD AL+ ALQ NF++
Sbjct: 298 NGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTR 357

[Close]

BLAST of Spg028256 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 121.3 bits (303), Expect = 2.3e-23
Identity = 94/300 (31.33%), Postives = 133/300 (44.33%), Query Frame = 0


Query: 228 VVREFYANIDEEEGFQVIVRGVAVDWSPRAINSLNNLQD--FSHAGYNEMAVAPSNEQLN 287
           +VREFYAN+ + E   + VRGV V WS  AIN++  L D    H+ + E    P   +L 
Sbjct: 16  LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEP---ELI 75

Query: 288 VAVWEVGIEGAQWRLSKTEKRTFQTAYLKKEANTWMRFIRS------------------- 347
             +  V   GA+W +S     T   + L   A  W  F++S                   
Sbjct: 76  TVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLL 135

Query: 348 ------LSIDVGKIIASEIFGCRHKKVGKLFFPNTISMLCKRAGVPESIEDLILLDKGII 407
                  SI+VG++I SEI  C  +K G LFFP+ I+ LC+ A  P  + +  L + G I
Sbjct: 136 HSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNA--PFLVNEEKLHNTGEI 195

Query: 408 DT-----------------PNLARLQRAQETRQGGLVCGIHQILEQLTLSASRQEFAERQ 467
           D                  P+ +R   A  +R  G    + Q L+ L    S+QE   +Q
Sbjct: 196 DAIAVARITQEGPTESTQQPSSSRPAAASSSRTNG---DVLQQLKALEQRLSQQEHTHKQ 255

Query: 468 AQTYWTYVKRRDVALRTALQANFSKPYPALPVFHDDLLNPWIPPPPIEREEEDDDAGPED 484
            Q +W Y K RD AL+ ALQ NF++P P  P F  ++L         E E E D  G  +
Sbjct: 256 QQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQDL----DYEYEAESDKDGSNE 303

[Close]

BLAST of Spg028256 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 106.3 bits (264), Expect = 7.5e-19
Identity = 71/221 (32.13%), Postives = 102/221 (46.15%), Query Frame = 0


Query: 199 GDLPHFLRADITNHGWELFCSKSEHVNSQVVREFYANIDEEEGFQVIVRGVAVDWSPRAI 258
           G LP F+   IT H W+ FC+  E     +VREFYAN+ +     V VRGV V WS  AI
Sbjct: 49  GQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAI 108

Query: 259 NSLNNLQDFSHAGYNEMAVAPSNEQLNVAVWEVGIEGAQWRLSKTEKRTFQTAYLKKEAN 318
           N++  L D     ++E     +   L   +  V + GA+W +S     T   + L   A 
Sbjct: 109 NAVFGLGD-PVDEHSEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAK 168

Query: 319 TWMRFIRS-------------------------LSIDVGKIIASEIFGCRHKKVGKLFFP 378
            W  F++S                          SI+VG++I SEI  C  +K G LFFP
Sbjct: 169 VWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFP 228

Query: 379 NTISMLCKRAGVPESIEDLILLDKGIIDTPNLARLQRAQET 395
           + I+ LC+ A  P  + +  L + G ID   +AR+ +   T
Sbjct: 229 SLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARITQEGPT 267

[Close]

BLAST of Spg028256 vs. NCBI nr
Match: KAF4378427.1 (hypothetical protein F8388_021621 [Cannabis sativa])

HSP 1 Score: 100.9 bits (250), Expect = 3.2e-17
Identity = 72/223 (32.29%), Postives = 114/223 (51.12%), Query Frame = 0


Query: 166 KRRLPYERFINHFPRAKYIDMLK-RDFLFERGF------SGDLPHFLRADITNHGWELFC 225
           K  L   +FI+    AKY D ++ ++F  ERG        G +P +L  +I    WE  C
Sbjct: 613 KSALEPRKFISKAAEAKYRDSVRHKEFYIERGIIVGDDNFGSMPPWLIENIKKRKWEGLC 672

Query: 226 SKSEHVNSQVVREFYAN-IDEEEGFQVIVRGVAVDWSPRAINSLNNLQDFSHAGYNEMAV 285
                   QVV+EFYAN +  E    +IVR V V +S + IN    L++ +   +++   
Sbjct: 673 EDPASAVCQVVKEFYANFLASEWPADIIVREVKVPFSDKLINEFFQLKNIT-CEFSKCNS 732

Query: 286 APSNEQLNVAVWEVGIEGAQWRLSKTEKRTFQTAYLKKEANTWMRFIRSL-SIDVGKIIA 345
             +++ ++  V E+   GA+W + +     F+ + L+ E       I+ L  ++VGK++A
Sbjct: 733 KLTDKLMHDIVPELVKPGAEWDIDEHGMFRFRRSDLQHE-------IKCLHEVNVGKVVA 792

Query: 346 SEIFGCRHKKVGKLFFPNTISMLCKRAGVPESIEDLILLDKGI 380
             IF C H+  GKLFFP  I+ LC+ AGVP   ED  +  KG+
Sbjct: 793 KGIFDCAHRVKGKLFFPCLITELCRCAGVPMIPEDGTVTRKGV 827

[Close]

BLAST of Spg028256 vs. NCBI nr
Match: EXB53755.1 (hypothetical protein L484_022412 [Morus notabilis])

HSP 1 Score: 100.1 bits (248), Expect = 5.4e-17
Identity = 65/217 (29.95%), Postives = 105/217 (48.39%), Query Frame = 0


Query: 202 PHFLRADITNHGWELFCSKSEHVNSQVVREFYANIDEEEGFQVIVRGVAVDWSPRAINSL 261
           P F+   I  HGW  FC    +    +VREFYAN+ +     V V+ V V ++ RAINS+
Sbjct: 4   PAFITRVIHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSI 63

Query: 262 NNLQDFSHAGYNEMAVAPSNEQLNVAVWEVGIEGAQWRLSKTEKRTFQTAYLKKEANTWM 321
             L++     Y + A   ++EQL V + EV IEGA W++S     T     LK+ A  W 
Sbjct: 64  FGLEEVVDE-YVDFASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWY 123

Query: 322 RFIRS-------------------------LSIDVGKIIASEIFGC-RHKKVGKLFFPNT 381
            F+ +                         +S+++ +I   EI  C   +K G L+FP+ 
Sbjct: 124 HFLTARFMPSTHGKTVAKDRVLLLYSILTGISVNIEEITIKEIKACSAARKRGGLYFPSL 183

Query: 382 ISMLCKRAGVPESIEDLILLDKGIIDTPNLARLQRAQ 393
           I+ L  +A VP   ++ I+ + G I T +++R+ + +
Sbjct: 184 ITQLWLKANVPYHKDEAIVHNAGAISTLSISRISQGR 219

[Close]

BLAST of Spg028256 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.3e-28
Identity = 102/335 (30.45%), Postives = 144/335 (42.99%), Query Frame = 0


Query: 199 GDLPHFLRADITNHGWELFCSKSEHVNSQVVREFYANIDEEEGFQVIVRGVAVDWSPRAI 258
           G LP F+   IT H W+ FC+  E     +VREFYAN+ + E   V VRGV V WS  AI
Sbjct: 58  GQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAI 117

Query: 259 NSLNNLQDFSHAGYNEMAVAPSNEQLNVAVWEVGIEGAQWRLSKTEKRTFQTAYLKKEAN 318
           N++  L D     ++E     + + L   +  V   GA+W +S     T   + L   A 
Sbjct: 118 NAVFGLGD-PVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAK 177

Query: 319 TWMRFIRS-------------------------LSIDVGKIIASEIFGCRHKKVGKLFFP 378
            W  F++S                          SI+VG++I SEI  C  +K G LFFP
Sbjct: 178 VWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFP 237

Query: 379 NTISMLCKRAGVPESIEDLILLDKGIIDT-----------------PNLARLQRAQETRQ 438
           + I+ LC+ A  P  + +  L + G ID                  P+ +R   A   R 
Sbjct: 238 SLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRT 297

Query: 439 GGLVCGIHQILEQLTLSASRQEF--------AERQAQTYWTYVKRRDVALRTALQANFSK 484
            G +    + LEQ       Q++          +Q Q +W Y K RD AL+ ALQ NF++
Sbjct: 298 NGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTR 357

[Close]

BLAST of Spg028256 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-23
Identity = 94/300 (31.33%), Postives = 133/300 (44.33%), Query Frame = 0


Query: 228 VVREFYANIDEEEGFQVIVRGVAVDWSPRAINSLNNLQD--FSHAGYNEMAVAPSNEQLN 287
           +VREFYAN+ + E   + VRGV V WS  AIN++  L D    H+ + E    P   +L 
Sbjct: 16  LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEP---ELI 75

Query: 288 VAVWEVGIEGAQWRLSKTEKRTFQTAYLKKEANTWMRFIRS------------------- 347
             +  V   GA+W +S     T   + L   A  W  F++S                   
Sbjct: 76  TVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLL 135

Query: 348 ------LSIDVGKIIASEIFGCRHKKVGKLFFPNTISMLCKRAGVPESIEDLILLDKGII 407
                  SI+VG++I SEI  C  +K G LFFP+ I+ LC+ A  P  + +  L + G I
Sbjct: 136 HSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNA--PFLVNEEKLHNTGEI 195

Query: 408 DT-----------------PNLARLQRAQETRQGGLVCGIHQILEQLTLSASRQEFAERQ 467
           D                  P+ +R   A  +R  G    + Q L+ L    S+QE   +Q
Sbjct: 196 DAIAVARITQEGPTESTQQPSSSRPAAASSSRTNG---DVLQQLKALEQRLSQQEHTHKQ 255

Query: 468 AQTYWTYVKRRDVALRTALQANFSKPYPALPVFHDDLLNPWIPPPPIEREEEDDDAGPED 484
            Q +W Y K RD AL+ ALQ NF++P P  P F  ++L         E E E D  G  +
Sbjct: 256 QQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQDL----DYEYEAESDKDGSNE 303

[Close]

BLAST of Spg028256 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.6e-19
Identity = 71/221 (32.13%), Postives = 102/221 (46.15%), Query Frame = 0


Query: 199 GDLPHFLRADITNHGWELFCSKSEHVNSQVVREFYANIDEEEGFQVIVRGVAVDWSPRAI 258
           G LP F+   IT H W+ FC+  E     +VREFYAN+ +     V VRGV V WS  AI
Sbjct: 49  GQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAI 108

Query: 259 NSLNNLQDFSHAGYNEMAVAPSNEQLNVAVWEVGIEGAQWRLSKTEKRTFQTAYLKKEAN 318
           N++  L D     ++E     +   L   +  V + GA+W +S     T   + L   A 
Sbjct: 109 NAVFGLGD-PVDEHSEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAK 168

Query: 319 TWMRFIRS-------------------------LSIDVGKIIASEIFGCRHKKVGKLFFP 378
            W  F++S                          SI+VG++I SEI  C  +K G LFFP
Sbjct: 169 VWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFP 228

Query: 379 NTISMLCKRAGVPESIEDLILLDKGIIDTPNLARLQRAQET 395
           + I+ LC+ A  P  + +  L + G ID   +AR+ +   T
Sbjct: 229 SLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARITQEGPT 267

[Close]

BLAST of Spg028256 vs. ExPASy TrEMBL
Match: A0A7J6G6G2 (Fanconi-associated nuclease OS=Cannabis sativa OX=3483 GN=F8388_021621 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-17
Identity = 72/223 (32.29%), Postives = 114/223 (51.12%), Query Frame = 0


Query: 166 KRRLPYERFINHFPRAKYIDMLK-RDFLFERGF------SGDLPHFLRADITNHGWELFC 225
           K  L   +FI+    AKY D ++ ++F  ERG        G +P +L  +I    WE  C
Sbjct: 613 KSALEPRKFISKAAEAKYRDSVRHKEFYIERGIIVGDDNFGSMPPWLIENIKKRKWEGLC 672

Query: 226 SKSEHVNSQVVREFYAN-IDEEEGFQVIVRGVAVDWSPRAINSLNNLQDFSHAGYNEMAV 285
                   QVV+EFYAN +  E    +IVR V V +S + IN    L++ +   +++   
Sbjct: 673 EDPASAVCQVVKEFYANFLASEWPADIIVREVKVPFSDKLINEFFQLKNIT-CEFSKCNS 732

Query: 286 APSNEQLNVAVWEVGIEGAQWRLSKTEKRTFQTAYLKKEANTWMRFIRSL-SIDVGKIIA 345
             +++ ++  V E+   GA+W + +     F+ + L+ E       I+ L  ++VGK++A
Sbjct: 733 KLTDKLMHDIVPELVKPGAEWDIDEHGMFRFRRSDLQHE-------IKCLHEVNVGKVVA 792

Query: 346 SEIFGCRHKKVGKLFFPNTISMLCKRAGVPESIEDLILLDKGI 380
             IF C H+  GKLFFP  I+ LC+ AGVP   ED  +  KG+
Sbjct: 793 KGIFDCAHRVKGKLFFPCLITELCRCAGVPMIPEDGTVTRKGV 827

[Close]

BLAST of Spg028256 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-17
Identity = 65/217 (29.95%), Postives = 105/217 (48.39%), Query Frame = 0


Query: 202 PHFLRADITNHGWELFCSKSEHVNSQVVREFYANIDEEEGFQVIVRGVAVDWSPRAINSL 261
           P F+   I  HGW  FC    +    +VREFYAN+ +     V V+ V V ++ RAINS+
Sbjct: 4   PAFITRVIHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSI 63

Query: 262 NNLQDFSHAGYNEMAVAPSNEQLNVAVWEVGIEGAQWRLSKTEKRTFQTAYLKKEANTWM 321
             L++     Y + A   ++EQL V + EV IEGA W++S     T     LK+ A  W 
Sbjct: 64  FGLEEVVDE-YVDFASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWY 123

Query: 322 RFIRS-------------------------LSIDVGKIIASEIFGC-RHKKVGKLFFPNT 381
            F+ +                         +S+++ +I   EI  C   +K G L+FP+ 
Sbjct: 124 HFLTARFMPSTHGKTVAKDRVLLLYSILTGISVNIEEITIKEIKACSAARKRGGLYFPSL 183

Query: 382 ISMLCKRAGVPESIEDLILLDKGIIDTPNLARLQRAQ 393
           I+ L  +A VP   ++ I+ + G I T +++R+ + +
Sbjct: 184 ITQLWLKANVPYHKDEAIVHNAGAISTLSISRISQGR 219

The following BLAST results are available for this feature:

BLAST of Spg028256 vs. NCBI nr


Match Name	E-value	Identity	Description
PON46472.1	8.9e-28	30.45	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
PON78020.1	2.3e-23	31.33	hypothetical protein PanWU01x14_023740 [Parasponia andersonii]	[more]
PON35554.1	7.5e-19	32.13	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
KAF4378427.1	3.2e-17	32.29	hypothetical protein F8388_021621 [Cannabis sativa]	[more]
EXB53755.1	5.4e-17	29.95	hypothetical protein L484_022412 [Morus notabilis]	[more]

BLAST of Spg028256 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg028256 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5BCG4	4.3e-28	30.45	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5DXM3	1.1e-23	31.33	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE...	[more]
A0A2P5AGA5	3.6e-19	32.13	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A7J6G6G2	1.5e-17	32.29	Fanconi-associated nuclease OS=Cannabis sativa OX=3483 GN=F8388_021621 PE=3 SV=1	[more]
W9QTD9	2.6e-17	29.95	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1	[more]

BLAST of Spg028256 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..148
None	No IPR available	COILS	Coil	Coil	coord: 24..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 464..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028256.1	Spg028256.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process