Spg028216 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028216
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	malignant T-cell-amplified sequence 1 homolog
Location	scaffold2: 45326800 .. 45328024 (+)
RNA-Seq Expression	Spg028216
Synteny	Spg028216

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAGAGCTCCGACCGGCTTAATACGCACGCAGCTGCTGTCGCCGGTCGGTTAACTGTTCTCTCTTCTCTACTTCCGCTAACTTTCTCTTCCGATTTCCACACCGATACTCTTGTGGGCTCCGAGCAATCGTCTTCCCTCGTTCTGGAGTCCTCTCCATATTCAATCTAACAATCTTACATTCTTTCACATTGCAAGCATTCTCTTCAATTAACCCCGCGGCATCATGTTCAAAAAGTGAGCTCTCTCCCATATCTGTACTGCCTGTTTTTCAGCTATGATTTCATGTCTTTGCTTCACGATTGTGGAAATTGATTTCTGGGTTTTGTTTATTTGGGGTTAGAATATGAGGAAATGGTTCGATTTCTTCACTTATTTTCATATGTTTCTTTTATCTCTGGATTTTGCTCGAATAGTGTCTTCTTTCTCGTTTAAATGGTGGGTTCGTTTGTGGGGTTCTGTCTGTTTGATTCTCCTCATTGGAAAAAGGGATATATATGTATATTTTTTTACTTCCATTTCTCGTTTGATGTGTTTATGGGCTGCTATGGACGAACCATTGTGGCTGAATTCGAACATTTTGGAATATGAATTGAAATTCTCTTAGTTGATATTTTTGGAGTTAGTATTGTTTACTTGTGGAATTGAGTGCGTGTATTGATTCCCTCACCATCTCTTCTAGTGGTATTGTTTGTATAAATCCTTCCATTTTTGTGCTTTTTCTTGTGTTGCTGTTTCATTTTAGGTTTTCTACTGAAGACGTGTCTGCTCAGAATCAAGTCAAGGCATCGGTGCAACGGAAAATTCGGCAAAGTATCGCGGAAGAAGTCAGTACTAGTTGAGCTATTTGAATCTTAGAATCATATTAATGAGATAGCAATTGATGTGTCTCTATCTGTTTTCTGTCCTTTTATTGCAGTATCCTGGACTAGAGCCAGTTTTGGATGATTTGCTGCCTAAAAAAGCCCCTCTGATCGTTACTAAGTGGTTAGAAATTCTGTTTGCTTTTACTTTTACACAAAAGGATTGACATTAGATTTATTTATTTTGCTCAGTTAATGCGATATATATGATGCTCATGTTGCATTTTTTGAACTACTCTTATAGTCAAAACCATCTCAATCTGGTTGTTGTGAACAATGTGCCACTCTTTTTCAATATCCGTGATGGGCCCTACATGCCTACCTTAAGGTTGCTTCATCAATGTAATGTTTTCTTTCTCTGA

mRNA sequence

CCCAAGAGCTCCGACCGGCTTAATACGCACGCAGCTGCTGTCGCCGGTCGGTTAACTGTTCTCTCTTCTCTACTTCCGCTAACTTTCTCTTCCGATTTCCACACCGATACTCTTGTGGGCTCCGAGCAATCGTTTTCTACTGAAGACGTGTCTGCTCAGAATCAAGTCAAGGCATCGGTGCAACGGAAAATTCGGCAAAGTATCGCGGAAGAATATCCTGGACTAGAGCCAGTTTTGGATGATTTGCTGCCTAAAAAAGCCCCTCTGATCGTTACTAAGTGTCAAAACCATCTCAATCTGGTTGTTGTGAACAATGTGCCACTCTTTTTCAATATCCGTGATGGGCCCTACATGCCTACCTTAAGGTTGCTTCATCAATGTAATGTTTTCTTTCTCTGA

Coding sequence (CDS)

CCCAAGAGCTCCGACCGGCTTAATACGCACGCAGCTGCTGTCGCCGGTCGGTTAACTGTTCTCTCTTCTCTACTTCCGCTAACTTTCTCTTCCGATTTCCACACCGATACTCTTGTGGGCTCCGAGCAATCGTTTTCTACTGAAGACGTGTCTGCTCAGAATCAAGTCAAGGCATCGGTGCAACGGAAAATTCGGCAAAGTATCGCGGAAGAATATCCTGGACTAGAGCCAGTTTTGGATGATTTGCTGCCTAAAAAAGCCCCTCTGATCGTTACTAAGTGTCAAAACCATCTCAATCTGGTTGTTGTGAACAATGTGCCACTCTTTTTCAATATCCGTGATGGGCCCTACATGCCTACCTTAAGGTTGCTTCATCAATGTAATGTTTTCTTTCTCTGA

Protein sequence

PKSSDRLNTHAAAVAGRLTVLSSLLPLTFSSDFHTDTLVGSEQSFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQCNVFFL

Homology

[Close]

BLAST of Spg028216 vs. NCBI nr
Match: XP_038887727.1 (malignant T-cell-amplified sequence 1 homolog [Benincasa hispida])

HSP 1 Score: 166.0 bits (419), Expect = 2.2e-37
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 43  QSFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 102
           + FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV
Sbjct: 3   KKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 62

Query: 103 VNNVPLFFNIRDGPYMPTLRLLHQ 127
           VNNVPLFFNIRDGPYMPTLRLLHQ
Sbjct: 63  VNNVPLFFNIRDGPYMPTLRLLHQ 86

[Close]

BLAST of Spg028216 vs. NCBI nr
Match: XP_008450609.1 (PREDICTED: malignant T-cell-amplified sequence 1 homolog [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 2.2e-37
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 43  QSFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 102
           + FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV
Sbjct: 3   KKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 62

Query: 103 VNNVPLFFNIRDGPYMPTLRLLHQ 127
           VNNVPLFFNIRDGPYMPTLRLLHQ
Sbjct: 63  VNNVPLFFNIRDGPYMPTLRLLHQ 86

[Close]

BLAST of Spg028216 vs. NCBI nr
Match: XP_022135845.1 (malignant T-cell-amplified sequence 1 homolog [Momordica charantia])

HSP 1 Score: 166.0 bits (419), Expect = 2.2e-37
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 43  QSFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 102
           + FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV
Sbjct: 3   KKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 62

Query: 103 VNNVPLFFNIRDGPYMPTLRLLHQ 127
           VNNVPLFFNIRDGPYMPTLRLLHQ
Sbjct: 63  VNNVPLFFNIRDGPYMPTLRLLHQ 86

[Close]

BLAST of Spg028216 vs. NCBI nr
Match: ACA24498.1 (pseudouridine synthase and archaeosine transglycosylase-like protein [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 2.2e-37
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 43  QSFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 102
           + FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV
Sbjct: 3   KKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 62

Query: 103 VNNVPLFFNIRDGPYMPTLRLLHQ 127
           VNNVPLFFNIRDGPYMPTLRLLHQ
Sbjct: 63  VNNVPLFFNIRDGPYMPTLRLLHQ 86

[Close]

BLAST of Spg028216 vs. NCBI nr
Match: XP_011659846.1 (malignant T-cell-amplified sequence 1 homolog [Cucumis sativus] >KGN66049.1 hypothetical protein Csa_007097 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 2.2e-37
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 43  QSFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 102
           + FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV
Sbjct: 3   KKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 62

Query: 103 VNNVPLFFNIRDGPYMPTLRLLHQ 127
           VNNVPLFFNIRDGPYMPTLRLLHQ
Sbjct: 63  VNNVPLFFNIRDGPYMPTLRLLHQ 86

[Close]

BLAST of Spg028216 vs. ExPASy Swiss-Prot
Match: Q86KL4 (Malignant T-cell-amplified sequence 1 homolog OS=Dictyostelium discoideum OX=44689 GN=mcts1 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-19
Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 51  SAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFF 110
           +  NQ+K+S+QR I+ SI  +YP L+ + +D+ PKK P++  KCQNH+NLV++NN  LFF
Sbjct: 12  NTNNQIKSSLQRNIKNSILAQYPKLKDIEEDVFPKKVPIVQVKCQNHINLVLINNEVLFF 71

Query: 111 NIRDGPYMPTLRLLHQ 127
           N R+GPY PTLR LH+
Sbjct: 72  NEREGPYYPTLRFLHK 87

[Close]

BLAST of Spg028216 vs. ExPASy Swiss-Prot
Match: Q2KIE4 (Malignant T-cell-amplified sequence 1 OS=Bos taurus OX=9913 GN=MCTS1 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-14
Identity = 35/79 (44.30%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 48  EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVP 107
           E+VS   Q+K SV + I+  + E++PG+EP L+ ++PKK P+ + +C  H+ ++ VN   
Sbjct: 9   ENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGEL 68

Query: 108 LFFNIRDGPYMPTLRLLHQ 127
           LFF  R+GP+ PTLRLLH+
Sbjct: 69  LFFRQREGPFYPTLRLLHK 87

[Close]

BLAST of Spg028216 vs. ExPASy Swiss-Prot
Match: Q9ULC4 (Malignant T-cell-amplified sequence 1 OS=Homo sapiens OX=9606 GN=MCTS1 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-14
Identity = 35/79 (44.30%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 48  EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVP 107
           E+VS   Q+K SV + I+  + E++PG+EP L+ ++PKK P+ + +C  H+ ++ VN   
Sbjct: 9   ENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGEL 68

Query: 108 LFFNIRDGPYMPTLRLLHQ 127
           LFF  R+GP+ PTLRLLH+
Sbjct: 69  LFFRQREGPFYPTLRLLHK 87

[Close]

BLAST of Spg028216 vs. ExPASy Swiss-Prot
Match: Q9DB27 (Malignant T-cell-amplified sequence 1 OS=Mus musculus OX=10090 GN=Mcts1 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-14
Identity = 35/79 (44.30%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 48  EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVP 107
           E+VS   Q+K SV + I+  + E++PG+EP L+ ++PKK P+ + +C  H+ ++ VN   
Sbjct: 9   ENVSNCIQLKTSVIKGIKNQLLEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGEL 68

Query: 108 LFFNIRDGPYMPTLRLLHQ 127
           LFF  R+GP+ PTLRLLH+
Sbjct: 69  LFFRQREGPFYPTLRLLHK 87

[Close]

BLAST of Spg028216 vs. ExPASy Swiss-Prot
Match: Q4G009 (Malignant T-cell-amplified sequence 1 OS=Rattus norvegicus OX=10116 GN=Mcts1 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-14
Identity = 35/79 (44.30%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 48  EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVP 107
           E+VS   Q+K SV + I+  + E++PG+EP L+ ++PKK P+ + +C  H+ ++ VN   
Sbjct: 10  ENVSNCIQLKTSVIKGIKNQLLEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGEL 69

Query: 108 LFFNIRDGPYMPTLRLLHQ 127
           LFF  R+GP+ PTLRLLH+
Sbjct: 70  LFFRQREGPFYPTLRLLHK 88

[Close]

BLAST of Spg028216 vs. ExPASy TrEMBL
Match: A0A0A0LYF6 (PUA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569260 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.1e-37
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 43  QSFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 102
           + FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV
Sbjct: 3   KKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 62

Query: 103 VNNVPLFFNIRDGPYMPTLRLLHQ 127
           VNNVPLFFNIRDGPYMPTLRLLHQ
Sbjct: 63  VNNVPLFFNIRDGPYMPTLRLLHQ 86

[Close]

BLAST of Spg028216 vs. ExPASy TrEMBL
Match: B3TLK5 (Pseudouridine synthase and archaeosine transglycosylase-like protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.1e-37
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 43  QSFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 102
           + FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV
Sbjct: 3   KKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 62

Query: 103 VNNVPLFFNIRDGPYMPTLRLLHQ 127
           VNNVPLFFNIRDGPYMPTLRLLHQ
Sbjct: 63  VNNVPLFFNIRDGPYMPTLRLLHQ 86

[Close]

BLAST of Spg028216 vs. ExPASy TrEMBL
Match: A0A6J1C273 (malignant T-cell-amplified sequence 1 homolog OS=Momordica charantia OX=3673 GN=LOC111007697 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.1e-37
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 43  QSFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 102
           + FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV
Sbjct: 3   KKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 62

Query: 103 VNNVPLFFNIRDGPYMPTLRLLHQ 127
           VNNVPLFFNIRDGPYMPTLRLLHQ
Sbjct: 63  VNNVPLFFNIRDGPYMPTLRLLHQ 86

[Close]

BLAST of Spg028216 vs. ExPASy TrEMBL
Match: A0A1S3BPJ3 (malignant T-cell-amplified sequence 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492146 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.1e-37
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 43  QSFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 102
           + FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV
Sbjct: 3   KKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 62

Query: 103 VNNVPLFFNIRDGPYMPTLRLLHQ 127
           VNNVPLFFNIRDGPYMPTLRLLHQ
Sbjct: 63  VNNVPLFFNIRDGPYMPTLRLLHQ 86

[Close]

BLAST of Spg028216 vs. ExPASy TrEMBL
Match: A0A6J1HVW2 (malignant T-cell-amplified sequence 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467930 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.4e-37
Identity = 81/84 (96.43%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 43  QSFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 102
           + FSTEDVSAQNQVKASVQR+IRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV
Sbjct: 3   KKFSTEDVSAQNQVKASVQRRIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 62

Query: 103 VNNVPLFFNIRDGPYMPTLRLLHQ 127
           VNNVPLFFNIRDGPYMPTLRLLHQ
Sbjct: 63  VNNVPLFFNIRDGPYMPTLRLLHQ 86

[Close]

BLAST of Spg028216 vs. TAIR 10
Match: AT1G09150.1 (pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.0e-32
Identity = 66/84 (78.57%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 43  QSFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV 102
           + F  E++S+QNQVKASVQR+IRQSI +EYPGLE V++DLLPKK PLIV KC NHL LVV
Sbjct: 3   KKFCLEEISSQNQVKASVQRRIRQSIQDEYPGLESVMEDLLPKKIPLIVVKCPNHLTLVV 62

Query: 103 VNNVPLFFNIRDGPYMPTLRLLHQ 127
           VNNVPLFF IRDGPYMPTLRLLHQ
Sbjct: 63  VNNVPLFFCIRDGPYMPTLRLLHQ 86

The following BLAST results are available for this feature:

BLAST of Spg028216 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887727.1	2.2e-37	97.62	malignant T-cell-amplified sequence 1 homolog [Benincasa hispida]	[more]
XP_008450609.1	2.2e-37	97.62	PREDICTED: malignant T-cell-amplified sequence 1 homolog [Cucumis melo]	[more]
XP_022135845.1	2.2e-37	97.62	malignant T-cell-amplified sequence 1 homolog [Momordica charantia]	[more]
ACA24498.1	2.2e-37	97.62	pseudouridine synthase and archaeosine transglycosylase-like protein [Cucumis sa...	[more]
XP_011659846.1	2.2e-37	97.62	malignant T-cell-amplified sequence 1 homolog [Cucumis sativus] >KGN66049.1 hypo...	[more]

BLAST of Spg028216 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q86KL4	1.6e-19	53.95	Malignant T-cell-amplified sequence 1 homolog OS=Dictyostelium discoideum OX=446...	[more]
Q2KIE4	2.7e-14	44.30	Malignant T-cell-amplified sequence 1 OS=Bos taurus OX=9913 GN=MCTS1 PE=2 SV=1	[more]
Q9ULC4	2.7e-14	44.30	Malignant T-cell-amplified sequence 1 OS=Homo sapiens OX=9606 GN=MCTS1 PE=1 SV=1	[more]
Q9DB27	2.7e-14	44.30	Malignant T-cell-amplified sequence 1 OS=Mus musculus OX=10090 GN=Mcts1 PE=1 SV=...	[more]
Q4G009	2.7e-14	44.30	Malignant T-cell-amplified sequence 1 OS=Rattus norvegicus OX=10116 GN=Mcts1 PE=...	[more]

BLAST of Spg028216 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYF6	1.1e-37	97.62	PUA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569260 PE=4 SV...	[more]
B3TLK5	1.1e-37	97.62	Pseudouridine synthase and archaeosine transglycosylase-like protein OS=Cucumis ...	[more]
A0A6J1C273	1.1e-37	97.62	malignant T-cell-amplified sequence 1 homolog OS=Momordica charantia OX=3673 GN=...	[more]
A0A1S3BPJ3	1.1e-37	97.62	malignant T-cell-amplified sequence 1 homolog OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1HVW2	2.4e-37	96.43	malignant T-cell-amplified sequence 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Spg028216 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09150.1	1.0e-32	78.57	pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.400.20		coord: 45..131 e-value: 1.1E-20 score: 76.1
None	No IPR available	PANTHER	PTHR22798:SF9	BNACNNG06600D PROTEIN	coord: 44..128
None	No IPR available	CDD	cd11609	MCT1_N	coord: 45..119 e-value: 3.67298E-44 score: 137.281
IPR041366	Pre-PUA domain	PFAM	PF17832	Pre-PUA	coord: 47..127 e-value: 4.3E-26 score: 91.4
IPR016437	MCT-1/Tma20	PANTHER	PTHR22798	MCT-1 PROTEIN	coord: 44..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028216.1	Spg028216.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001731	formation of translation preinitiation complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome