Spg028195 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028195
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	nuclear transcription factor Y subunit B-4-like
Location	scaffold2: 42056656 .. 42056922 (-)
RNA-Seq Expression	Spg028195
Synteny	Spg028195

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGATACTTCCGAGAACAGCCAAGGTTTCCAAAGAAGCCAAAGAGACAATGCAAGAATGTGCGACTGAGTTCATCAGCTTCGTAACAAGTGAAGCAGCAGAAAAGTGTCAGAAAGAGAATCGTAGAACTCTCAATGGAGACGATATTTGTTGGGCTTTTGGTGCCCTTGGCTTAGACAACTATGCTGAGGCTTCTGCCAAGTACTTGTTCAAGTATAGAGATGATGAGAGAATCAAGGCTGAGAACAAAAGCAATATATAA

mRNA sequence

ATGAAGAAGATACTTCCGAGAACAGCCAAGGTTTCCAAAGAAGCCAAAGAGACAATGCAAGAATGTGCGACTGAGTTCATCAGCTTCGTAACAAGTGAAGCAGCAGAAAAGTGTCAGAAAGAGAATCGTAGAACTCTCAATGGAGACGATATTTGTTGGGCTTTTGGTGCCCTTGGCTTAGACAACTATGCTGAGGCTTCTGCCAAGTACTTGTTCAAGTATAGAGATGATGAGAGAATCAAGGCTGAGAACAAAAGCAATATATAA

Coding sequence (CDS)

ATGAAGAAGATACTTCCGAGAACAGCCAAGGTTTCCAAAGAAGCCAAAGAGACAATGCAAGAATGTGCGACTGAGTTCATCAGCTTCGTAACAAGTGAAGCAGCAGAAAAGTGTCAGAAAGAGAATCGTAGAACTCTCAATGGAGACGATATTTGTTGGGCTTTTGGTGCCCTTGGCTTAGACAACTATGCTGAGGCTTCTGCCAAGTACTTGTTCAAGTATAGAGATGATGAGAGAATCAAGGCTGAGAACAAAAGCAATATATAA

Protein sequence

MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI

Homology

[Close]

BLAST of Spg028195 vs. NCBI nr
Match: XP_022968852.1 (nuclear transcription factor Y subunit B-4-like [Cucurbita maxima])

HSP 1 Score: 151.0 bits (380), Expect = 4.8e-33
Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKKILP+ AK+SKEAK TMQECATEFISFVTSEAAEKC K+NRRTLNGDDICWAFG+ GL
Sbjct: 20  MKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGL 79

Query: 61  DNYAEASAKYLFKYRDDERIKAENKSNI 89
           DNYAEASAKYL KYRD ERI A+ K+NI
Sbjct: 80  DNYAEASAKYLLKYRDIERINAQFKTNI 107

[Close]

BLAST of Spg028195 vs. NCBI nr
Match: XP_023546470.1 (nuclear transcription factor Y subunit B-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.0 bits (380), Expect = 4.8e-33
Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKKILP+ AK+SKEAK TMQECATEFISFVTSEAAEKC K+NRRTLNGDDICWAFG+ GL
Sbjct: 20  MKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGL 79

Query: 61  DNYAEASAKYLFKYRDDERIKAENKSNI 89
           DNYAEASAKYL KYRD ERI A+ K+NI
Sbjct: 80  DNYAEASAKYLLKYRDVERINAQFKTNI 107

[Close]

BLAST of Spg028195 vs. NCBI nr
Match: KAG6590402.1 (Nuclear transcription factor Y subunit B-4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.0 bits (380), Expect = 4.8e-33
Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKKILP+ AK+SKEAK TMQECATEFISFVTSEAAEKC K+NRRTLNGDDICWAFG+ GL
Sbjct: 20  MKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGL 79

Query: 61  DNYAEASAKYLFKYRDDERIKAENKSNI 89
           DNYAEASAKYL KYRD ERI A+ K+NI
Sbjct: 80  DNYAEASAKYLLKYRDVERINAQFKTNI 107

[Close]

BLAST of Spg028195 vs. NCBI nr
Match: XP_022961414.1 (nuclear transcription factor Y subunit B-4-like [Cucurbita moschata])

HSP 1 Score: 151.0 bits (380), Expect = 4.8e-33
Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKKILP+ AK+SKEAK TMQECATEFISFVTSEAAEKC K+NRRTLNGDDICWAFG+ GL
Sbjct: 20  MKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGL 79

Query: 61  DNYAEASAKYLFKYRDDERIKAENKSNI 89
           DNYAEASAKYL KYRD ERI A+ K+NI
Sbjct: 80  DNYAEASAKYLLKYRDVERINAQFKTNI 107

[Close]

BLAST of Spg028195 vs. NCBI nr
Match: XP_038880507.1 (nuclear transcription factor Y subunit B-4-like [Benincasa hispida])

HSP 1 Score: 143.3 bits (360), Expect = 1.0e-30
Identity = 69/86 (80.23%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKKILP+ AK+SKEAKETMQECA+EFISFV SEAAEKC KENRRTLNGDDICWA G+ GL
Sbjct: 19  MKKILPQKAKISKEAKETMQECASEFISFVASEAAEKCHKENRRTLNGDDICWALGSCGL 78

Query: 61  DNYAEASAKYLFKYRDDERIKAENKS 87
           DNYAE SAKYL K+R+ ERIK  NK+
Sbjct: 79  DNYAEVSAKYLLKFREAERIKTSNKA 104

[Close]

BLAST of Spg028195 vs. ExPASy Swiss-Prot
Match: O04027 (Nuclear transcription factor Y subunit B-4 OS=Arabidopsis thaliana OX=3702 GN=NFYB4 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-26
Identity = 56/84 (66.67%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MK+ILP  AK+SKEAK+T+QECATEFISFVT EA+EKC +ENR+T+NGDDI WA   LGL
Sbjct: 17  MKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVNGDDIWWALSTLGL 76

Query: 61  DNYAEASAKYLFKYRDDERIKAEN 85
           DNYA+A  ++L KYR+ ER + E+
Sbjct: 77  DNYADAVGRHLHKYREAERERTEH 100

[Close]

BLAST of Spg028195 vs. ExPASy Swiss-Prot
Match: O82248 (Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana OX=3702 GN=NFYB5 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-23
Identity = 52/75 (69.33%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MK ILP  AKVSKEAKETMQEC +EFISFVT EA++KC KE R+T+NGDDICWA   LG 
Sbjct: 65  MKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWAMANLGF 124

Query: 61  DNYAEASAKYLFKYR 76
           D+YA    KYL +YR
Sbjct: 125 DDYAAQLKKYLHRYR 139

[Close]

BLAST of Spg028195 vs. ExPASy Swiss-Prot
Match: Q9SIT9 (Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana OX=3702 GN=NFYB7 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-21
Identity = 48/84 (57.14%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKK+LP   K+SK+AKET+QEC +EFISFVT EA++KCQ+E R+T+NGDDI WA   LG 
Sbjct: 50  MKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGF 109

Query: 61  DNYAEASAKYLFKYRDDERIKAEN 85
           ++Y      YL KYRD E  K  +
Sbjct: 110 EDYVAPLKVYLCKYRDTEGEKVNS 133

[Close]

BLAST of Spg028195 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.4e-21
Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKK LP  AK+SK+AKETMQEC +EFISFVT EA++KCQKE R+T+NGDD+ WA   LG 
Sbjct: 41  MKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGF 100

Query: 61  DNYAEASAKYLFKYRDDE 79
           ++Y E    YL ++R+ E
Sbjct: 101 EDYVEPLKVYLQRFREIE 118

[Close]

BLAST of Spg028195 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.8e-21
Identity = 46/78 (58.97%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKK LP  AK+SK+AKET+QEC +EFISF+T EA++KCQ+E R+T+NGDD+ WA   LG 
Sbjct: 35  MKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGF 94

Query: 61  DNYAEASAKYLFKYRDDE 79
           ++Y E    YL KYR+ E
Sbjct: 95  EDYVEPLKVYLQKYREVE 112

[Close]

BLAST of Spg028195 vs. ExPASy TrEMBL
Match: A0A6J1HUN8 (nuclear transcription factor Y subunit B-4-like OS=Cucurbita maxima OX=3661 GN=LOC111467987 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.3e-33
Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKKILP+ AK+SKEAK TMQECATEFISFVTSEAAEKC K+NRRTLNGDDICWAFG+ GL
Sbjct: 20  MKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGL 79

Query: 61  DNYAEASAKYLFKYRDDERIKAENKSNI 89
           DNYAEASAKYL KYRD ERI A+ K+NI
Sbjct: 80  DNYAEASAKYLLKYRDIERINAQFKTNI 107

[Close]

BLAST of Spg028195 vs. ExPASy TrEMBL
Match: A0A6J1HDY6 (nuclear transcription factor Y subunit B-4-like OS=Cucurbita moschata OX=3662 GN=LOC111461996 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.3e-33
Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKKILP+ AK+SKEAK TMQECATEFISFVTSEAAEKC K+NRRTLNGDDICWAFG+ GL
Sbjct: 20  MKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGL 79

Query: 61  DNYAEASAKYLFKYRDDERIKAENKSNI 89
           DNYAEASAKYL KYRD ERI A+ K+NI
Sbjct: 80  DNYAEASAKYLLKYRDVERINAQFKTNI 107

[Close]

BLAST of Spg028195 vs. ExPASy TrEMBL
Match: A0A6J1CXT8 (nuclear transcription factor Y subunit B-4-like OS=Momordica charantia OX=3673 GN=LOC111015264 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.1e-30
Identity = 66/85 (77.65%), Postives = 77/85 (90.59%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKKI+P+T+K+SKEAK+TMQECATEFISFVTSEAAEKC +ENRRTLNG+DI WAFGALGL
Sbjct: 20  MKKIIPQTSKISKEAKQTMQECATEFISFVTSEAAEKCNRENRRTLNGEDIYWAFGALGL 79

Query: 61  DNYAEASAKYLFKYRDDERIKAENK 86
           DNYA+A+AKYL  YRD + +K  NK
Sbjct: 80  DNYADATAKYLLNYRDAQTMKIHNK 104

[Close]

BLAST of Spg028195 vs. ExPASy TrEMBL
Match: A0A6A1UNL9 (Nuclear transcription factor Y subunit B-4 OS=Morella rubra OX=262757 GN=CJ030_MR0G003693 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.1e-28
Identity = 64/88 (72.73%), Postives = 76/88 (86.36%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MK+ILP TAK+SKEAK+TMQECATEFISFVT+EA++KC KENR+T+NGDDICWA   LG 
Sbjct: 18  MKQILPATAKISKEAKQTMQECATEFISFVTAEASDKCHKENRKTVNGDDICWALSTLGF 77

Query: 61  DNYAEASAKYLFKYRDDERIKA-ENKSN 88
           DNYAEA  +YL+KYR+ ER KA +NK N
Sbjct: 78  DNYAEAIVRYLYKYREAERQKANQNKGN 105

[Close]

BLAST of Spg028195 vs. ExPASy TrEMBL
Match: A0A067JU24 (CBFD_NFYB_HMF domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_23333 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.6e-28
Identity = 63/87 (72.41%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MK+ILP +AK+SKEAK+TMQECATEFISFVT EA++KCQKENR+T+NGDDICWA  +LG 
Sbjct: 18  MKQILPPSAKISKEAKQTMQECATEFISFVTGEASDKCQKENRKTVNGDDICWALSSLGF 77

Query: 61  DNYAEASAKYLFKYRDDERIKAENKSN 88
           DNYAEA  +YL KYR+ ER KA N  N
Sbjct: 78  DNYAEAIVRYLHKYREAEREKAYNNQN 104

[Close]

BLAST of Spg028195 vs. TAIR 10
Match: AT1G09030.1 (nuclear factor Y, subunit B4 )

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-27
Identity = 56/84 (66.67%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MK+ILP  AK+SKEAK+T+QECATEFISFVT EA+EKC +ENR+T+NGDDI WA   LGL
Sbjct: 17  MKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVNGDDIWWALSTLGL 76

Query: 61  DNYAEASAKYLFKYRDDERIKAEN 85
           DNYA+A  ++L KYR+ ER + E+
Sbjct: 77  DNYADAVGRHLHKYREAERERTEH 100

[Close]

BLAST of Spg028195 vs. TAIR 10
Match: AT2G47810.1 (nuclear factor Y, subunit B5 )

HSP 1 Score: 110.2 bits (274), Expect = 8.8e-25
Identity = 52/75 (69.33%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MK ILP  AKVSKEAKETMQEC +EFISFVT EA++KC KE R+T+NGDDICWA   LG 
Sbjct: 65  MKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWAMANLGF 124

Query: 61  DNYAEASAKYLFKYR 76
           D+YA    KYL +YR
Sbjct: 125 DDYAAQLKKYLHRYR 139

[Close]

BLAST of Spg028195 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-22
Identity = 48/84 (57.14%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKK+LP   K+SK+AKET+QEC +EFISFVT EA++KCQ+E R+T+NGDDI WA   LG 
Sbjct: 50  MKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGF 109

Query: 61  DNYAEASAKYLFKYRDDERIKAEN 85
           ++Y      YL KYRD E  K  +
Sbjct: 110 EDYVAPLKVYLCKYRDTEGEKVNS 133

[Close]

BLAST of Spg028195 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 101.7 bits (252), Expect = 3.1e-22
Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKK LP  AK+SK+AKETMQEC +EFISFVT EA++KCQKE R+T+NGDD+ WA   LG 
Sbjct: 41  MKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGF 100

Query: 61  DNYAEASAKYLFKYRDDE 79
           ++Y E    YL ++R+ E
Sbjct: 101 EDYVEPLKVYLQRFREIE 118

[Close]

BLAST of Spg028195 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 101.3 bits (251), Expect = 4.1e-22
Identity = 46/78 (58.97%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 1   MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGL 60
           MKK LP  AK+SK+AKET+QEC +EFISF+T EA++KCQ+E R+T+NGDD+ WA   LG 
Sbjct: 35  MKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGF 94

Query: 61  DNYAEASAKYLFKYRDDE 79
           ++Y E    YL KYR+ E
Sbjct: 95  EDYVEPLKVYLQKYREVE 112

The following BLAST results are available for this feature:

BLAST of Spg028195 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968852.1	4.8e-33	84.09	nuclear transcription factor Y subunit B-4-like [Cucurbita maxima]	[more]
XP_023546470.1	4.8e-33	84.09	nuclear transcription factor Y subunit B-4-like [Cucurbita pepo subsp. pepo]	[more]
KAG6590402.1	4.8e-33	84.09	Nuclear transcription factor Y subunit B-4, partial [Cucurbita argyrosperma subs...	[more]
XP_022961414.1	4.8e-33	84.09	nuclear transcription factor Y subunit B-4-like [Cucurbita moschata]	[more]
XP_038880507.1	1.0e-30	80.23	nuclear transcription factor Y subunit B-4-like [Benincasa hispida]	[more]

BLAST of Spg028195 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04027	2.0e-26	66.67	Nuclear transcription factor Y subunit B-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
O82248	1.2e-23	69.33	Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SIT9	2.0e-21	57.14	Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FGJ3	4.4e-21	60.26	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
O23310	5.8e-21	58.97	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Spg028195 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HUN8	2.3e-33	84.09	nuclear transcription factor Y subunit B-4-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HDY6	2.3e-33	84.09	nuclear transcription factor Y subunit B-4-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1CXT8	7.1e-30	77.65	nuclear transcription factor Y subunit B-4-like OS=Momordica charantia OX=3673 G...	[more]
A0A6A1UNL9	5.1e-28	72.73	Nuclear transcription factor Y subunit B-4 OS=Morella rubra OX=262757 GN=CJ030_M...	[more]
A0A067JU24	6.6e-28	72.41	CBFD_NFYB_HMF domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_233...	[more]

BLAST of Spg028195 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09030.1	1.5e-27	66.67	nuclear factor Y, subunit B4	[more]
AT2G47810.1	8.8e-25	69.33	nuclear factor Y, subunit B5	[more]
AT2G13570.1	1.4e-22	57.14	nuclear factor Y, subunit B7	[more]
AT5G47640.1	3.1e-22	60.26	nuclear factor Y, subunit B2	[more]
AT4G14540.1	4.1e-22	58.97	nuclear factor Y, subunit B3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 57..75 score: 31.82 coord: 38..56 score: 27.03 coord: 19..37 score: 50.6
None	No IPR available	PANTHER	PTHR11064:SF83	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-4	coord: 1..85
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 1..54 e-value: 6.6E-20 score: 71.1
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..88 e-value: 3.8E-30 score: 106.5
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 1..86
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028195.1	Spg028195.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0048046	apoplast
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0004565	beta-galactosidase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding