Spg028180 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTATTAAAGAAAGATTAGACCGGTTCCTATGTAATTCAGAATTCGACTCCCTGTTTAATTTCATAAAAGCTAGTAATTTGGACTGGATGTTTTCTGATCATAAACCCATTGAGATATGTATGGAGAGGAGAAAACCTAAAACTATGAGTAGAAAGGACTACCCTTTCAAATTTGAAGAGCTTTGGACGACCTATGATGAATGCGAGGACCTAATTGTTAATAATGGTACATGGAAAGGTAATGATTTTCCTTTTGCTTCTTTGTCTGGAAATTTACAGAACTGCTCTTATGCACTTTCTAAATGGGGTAAAGAAATTAACTCTTTTAGGAAAAATAGGATAGCTGATTGCAAAAGGGACCTTAAAATTGCTTACAATAATCTCTCCAATACCAATTTTGATATAATTCATAGCATAGAATTTGAACTGGATAATTTGTTAGAGGAAGAAGAGATATATTGGAAACAAAAGTCTAGGGAAAATTGGTTAAAATGGGGGGATAAGAATTCTAGATGGTTCCATAAAAAGGCCTCCATTAGGAAAAAGACCAATGAAATTTCTGGAATCTATGATCTTAATGGTGTATGGACAGAAGACCTCCCAAAAATTCAAGAAACTTTTATCTCATACTTTGAAAATCTTTTCAGATCCTCTAACCCAGAACAAACTGATATTAACCTAGCCTTAGATGGAATAATGCCTAAAGTAACCCAAACTATGAACAATAAGCTTCTGGCCCCATTTTCAAAAGCTGAAATAGAAAGGGCAATTAACCAAATGTTTCCTACTAAAGCCCCGGGACCCGACGGCTACCCAGCAATTTTTTACCAAAAATATTGGCACATAGTAGGTGAAAAAACTATAACAGAATGCTTAGAAATACTTAATGGTCAGGGCAGTATCCAAGGCTGGAATAACACAAATATAGTTCTAATTCCCAAAGTAGCCAGCCCTAAGGAAGTGGGGGATTTTAGGCCAATTAGCCTTTGTAATGTTAATTACAAAATAATAACAAAAACTATTGCTAATAGGCTAAAAAGTGTCCTTAAGGAGATTATCTCAGATTCTCAATCAGCTTTCATCGAAGGCAAACTTATAACAGATAATATTATAATAGGACATGAGTGTATAAACGCTATTAGAAACAGTAGATTTAACTGTGGAAATATGGTAGCCCTTAAACTCGACCTTAGTAAAGCATATGATCGCGTAGAATGGTCTTATCTTAAAGCTATAATGTTGAGATTAGGTTTCAATTCTAGATGGGTTGATTTAATAATGGGTTGCATCTCGTCGGCTAACTTTTCTATCTTATTCAATGGAGAGAAAACAGGTAGCTTTAATTCGGGTAGGGGGCTTCGGCAAGGGGATCCTCTTTCCCCCTATCTTTTCTTACTCATTACAGAGGGCCTTTCCCATTTAATTAATTTGGCAACCACCAAAGGTAGTCTAACCGGTTTATCTGTTTCTAATGGTCCTATAATAAATCACCTTCTTTTTGCAGACGATAGTTTGATTTTTTGCAAGGCTAAAGATAGAGAACTGCTGGAAGTTAAGAGATTACTACAAATATATGAAATTGCCTCAGGAGAATCAATAAATTTCTCTAAGTCTGCAGTATTATTTTCTTCCAGGATAAATAACAATAGAAAGGATCACCTTAGTTCTATAATAGGGGTTAGAAATGTTAGCAACTTTGGTAAATACCTTGGAATACCTTCGGTATTATCTAGGAACAAATCTAGGGATTTTAGTTACATATTAGACAAAGTTTGGAATTCAGTTCAAGGATGGAAAAAAACATTTTTTTCAACAGCAGGGAAAGAAGTTCTAATTAAGAGTATAGGCCAAGCCATTCCCTCTTTTGCCATGAGTGTTTTTAGGTTCCCTAAGAGCCTTTGTGATAATATAACAAAAAGTTTTGCTAGGTTTTGGTGGGGATCTAGCCCTAATAAAAAAAAGCTTCATTGGTTTAAATGGGAGACCCTTTGTCTTCCAAAAAGTTTAGGTGGGCTGAATTTTAGAGATATCGAAGGTTTTAATCAAGCTCTAGTAGCTAAACAAGTTTGGAGGGTCCTTACAAATCCTAGCTCCTTAGTGTCTAGATTCCTTAAAAGCTTATATTTTCCAAATTCTAATATCTTAGAAGCAGTCGGGGGTAGACATCCTTCTTTCCTTTGGAAAAGTTTATTATGGGGTAGAGATTTATTATGCAAAGGCTTGAGATATAGAGTTGGGAATGGGGAGAGTATTAACATGTTTAAAGATCCCTGGATTCCCAAGGAATTTACATTTAGGCCTACTTGTATTGATAGTTCTATGTTTAACACTAAGGTATCAGATTTTACTACCCCATCTGGTGATTGGAATTTGGAAAAACTAAAATGTGCTGTCATGGATATTGATTATGATCTAATTAGAAGTATTCCACTTAATAAGAATCTGAATGATAAAATCAGTTGGCATTACGACAAAACAGGAAGATATTCAGTGAAAAGTGGTTATAATCTTTTTCAAAAAATTAAGATTGACGGTATATCAGCTAGTTCTTCCCCTATGACAAGAATTTGGAACAACATTTGGAAATTAAAGGTTCCCACTAAAATTAAACACTTTTGTTGGAAAGCCCTAAAAGAATCTCTTCCTAATAATTTCAATCTCCAGAATAGAGGTGTTAATATTTCAAACTTGTACCCTATGTGTGAATCCCAGATAGAAAATACAGATCATTGTCTATTTAGTTGTATTAGAGCTAAAGAAATTTGGAATCTGACCTTTAATAATGTTTTTTTGGAGGAGGATTTTTTCGGTAGCTTCATTGATCGATGGTGCAAGATCGATTCGGAACTTACACAGGTAGAGTTGGAGCTGGTGGCCGTTACTTGTTGGGCGATCTGGAGCGATAGGAACAAGCTGGTGCATGGTGAAGCTATTTCCCCTGTTTCAATCAAAAGCAGATGGATTCGGAATTATATTGACTCTTTTAAGAAGGCTAATACAAGGAATAGTCTGAATCAAGCAGCTAATCGTACTCGTATCTCTAATTCAAGCCCTTCCTCCTGGTCGCCTCCTCCTGAGGAATTTTGGAAGCTTAATACTGATGCTGCATGCGTTCCATCCTCTTCTTCAACGGGTCTGGGGATGATTTGTAGGAACAAGGATGGTGCAGCGATGATTGCCTCAGCTTTATTTTTCGATTTCCCAATGGATCCTCTGAGGGCAGAGGTGAAAGCAATTTACGAAGGCATGAAGGATGCTTTGTCGATGGGATGCAAACAGCTGAAAGTGGAATCTGATAATTTGATGGCAATTAATTTTATCAATAAAGCTTCAGTGGTTTGGGACGAAGTGGAAGTTGAAGTGGCAAGAATATGGGATTTAATTCCAAGTTTTTTAAAAATAGATTTTTCCTTTGTTCCCAGGTGTTGTAATAAAGTGGCTGACGTGGTGGCAAAGTTTGCCAGATCTGTAGGAAGTAATTCAACTTGGGTGGGTCATTTCCCTAGTTGGTTATGTACTGAGGTCCAATTGGACCTTTTTTATGCTGCCCATGTGGCGTAAATAAAGAGGTATTTTCTTTCAAAAAAAAAAAAAAAGAAGACGTTTAAAATATACAGTCACTTCAATGAAAAGGATTTAAAGAAACTTGTGTTTTAAGTTGATTCATTTAATTTGTATGGACTGATTAAAAAAAAAAGGGAATTATGGTAATATGTTTACTATATCATATCAAATTCATCCTTTTCCGTTGTAAAAAAAAAAAAAAGAATTCATCCTTTTCCAAAACCTTTTCCTATTTGGTTTGTTGCATATACACGTCACTTCCAAACACATTTGTTTCCAAAATCTTTTCCTATTTGGTTTTGGGGAATAATTTCTCTATAAAATCTCCTCCTCCTCCCCTGTCTTTTTCACAGAAAAACTCAAACTCTCCAAAGCAAATTAAAATCCCCATGGCGAATAGTACTCATCAGCAATGCAGCTCTCTCAATATCGACTTGACTCCAGAAGAACTTGAGGTCTCTCAAATCCTCTCTGAATTACCTCTTCTCATTCAGAAATTTGCCTTAGATTCGTCGTTGCAGTTGAGGGAGTCCAGTCCTGCTACTCTCTCGTCGTCCACTCAATCTAATGAGAATGTCAATGTCAAGCGCTCCAACAACTCTTGA ATGCTTATTAAAGAAAGATTAGACCGGTTCCTATGTAATTCAGAATTCGACTCCCTGTTTAATTTCATAAAAGCTAGTAATTTGGACTGGATGTTTTCTGATCATAAACCCATTGAGATATGTATGGAGAGGAGAAAACCTAAAACTATGAGTAGAAAGGACTACCCTTTCAAATTTGAAGAGCTTTGGACGACCTATGATGAATGCGAGGACCTAATTGTTAATAATGGTACATGGAAAGGTAATGATTTTCCTTTTGCTTCTTTGTCTGGAAATTTACAGAACTGCTCTTATGCACTTTCTAAATGGGGTAAAGAAATTAACTCTTTTAGGAAAAATAGGATAGCTGATTGCAAAAGGGACCTTAAAATTGCTTACAATAATCTCTCCAATACCAATTTTGATATAATTCATAGCATAGAATTTGAACTGGATAATTTGTTAGAGGAAGAAGAGATATATTGGAAACAAAACTTCATTGATCGATGGTGCAAGATCGATTCGGAACTTACACAGGTAGAGTTGGAGCTGGTGGCCGTTACTTGTTGGGCGATCTGGAGCGATAGGAACAAGCTGGTGCATGGTGAAGCTATTTCCCCTGTTTCAATCAAAAGCAGATGGATTCGGAATTATATTGACTCTTTTAAGAAGGCTAATACAAGGAATAGTCTGAATCAAGCAGCTAATCGTACTCGTATCTCTAATTCAAGCCCTTCCTCCTGGTCGCCTCCTCCTGAGGAATTTTGGAAGCTTAATACTGATGCTGCATGCGTTCCATCCTCTTCTTCAACGGGTCTGGGGATGATTTGTAGGAACAAGGATGGTGCAGCGATGATTGCCTCAGCTTTATTTTTCGATTTCCCAATGGATCCTCTGAGGGCAGAGGTGAAAGCAATTTACGAAGGCATGAAGGATGCTTTGTCGATGGGATGCAAACAGCTGAAAGTGGAATCTGATAATTTGATGGCAATTAATTTTATCAATAAAGCTTCAGTGGTTTGGGACGAAGTGGAAGTTGAAGTGGCAAGAATATGGGATTTAATTCCAAGTTTTTTAAAAATAGATTTTTCCTTTGTTCCCAGCTCTCTCAATATCGACTTGACTCCAGAAGAACTTGAGGTCTCTCAAATCCTCTCTGAATTACCTCTTCTCATTCAGAAATTTGCCTTAGATTCGTCGTTGCAGTTGAGGGAGTCCAGTCCTGCTACTCTCTCGTCGTCCACTCAATCTAATGAGAATGTCAATGTCAAGCGCTCCAACAACTCTTGA ATGCTTATTAAAGAAAGATTAGACCGGTTCCTATGTAATTCAGAATTCGACTCCCTGTTTAATTTCATAAAAGCTAGTAATTTGGACTGGATGTTTTCTGATCATAAACCCATTGAGATATGTATGGAGAGGAGAAAACCTAAAACTATGAGTAGAAAGGACTACCCTTTCAAATTTGAAGAGCTTTGGACGACCTATGATGAATGCGAGGACCTAATTGTTAATAATGGTACATGGAAAGGTAATGATTTTCCTTTTGCTTCTTTGTCTGGAAATTTACAGAACTGCTCTTATGCACTTTCTAAATGGGGTAAAGAAATTAACTCTTTTAGGAAAAATAGGATAGCTGATTGCAAAAGGGACCTTAAAATTGCTTACAATAATCTCTCCAATACCAATTTTGATATAATTCATAGCATAGAATTTGAACTGGATAATTTGTTAGAGGAAGAAGAGATATATTGGAAACAAAACTTCATTGATCGATGGTGCAAGATCGATTCGGAACTTACACAGGTAGAGTTGGAGCTGGTGGCCGTTACTTGTTGGGCGATCTGGAGCGATAGGAACAAGCTGGTGCATGGTGAAGCTATTTCCCCTGTTTCAATCAAAAGCAGATGGATTCGGAATTATATTGACTCTTTTAAGAAGGCTAATACAAGGAATAGTCTGAATCAAGCAGCTAATCGTACTCGTATCTCTAATTCAAGCCCTTCCTCCTGGTCGCCTCCTCCTGAGGAATTTTGGAAGCTTAATACTGATGCTGCATGCGTTCCATCCTCTTCTTCAACGGGTCTGGGGATGATTTGTAGGAACAAGGATGGTGCAGCGATGATTGCCTCAGCTTTATTTTTCGATTTCCCAATGGATCCTCTGAGGGCAGAGGTGAAAGCAATTTACGAAGGCATGAAGGATGCTTTGTCGATGGGATGCAAACAGCTGAAAGTGGAATCTGATAATTTGATGGCAATTAATTTTATCAATAAAGCTTCAGTGGTTTGGGACGAAGTGGAAGTTGAAGTGGCAAGAATATGGGATTTAATTCCAAGTTTTTTAAAAATAGATTTTTCCTTTGTTCCCAGCTCTCTCAATATCGACTTGACTCCAGAAGAACTTGAGGTCTCTCAAATCCTCTCTGAATTACCTCTTCTCATTCAGAAATTTGCCTTAGATTCGTCGTTGCAGTTGAGGGAGTCCAGTCCTGCTACTCTCTCGTCGTCCACTCAATCTAATGAGAATGTCAATGTCAAGCGCTCCAACAACTCTTGA MLIKERLDRFLCNSEFDSLFNFIKASNLDWMFSDHKPIEICMERRKPKTMSRKDYPFKFEELWTTYDECEDLIVNNGTWKGNDFPFASLSGNLQNCSYALSKWGKEINSFRKNRIADCKRDLKIAYNNLSNTNFDIIHSIEFELDNLLEEEEIYWKQNFIDRWCKIDSELTQVELELVAVTCWAIWSDRNKLVHGEAISPVSIKSRWIRNYIDSFKKANTRNSLNQAANRTRISNSSPSSWSPPPEEFWKLNTDAACVPSSSSTGLGMICRNKDGAAMIASALFFDFPMDPLRAEVKAIYEGMKDALSMGCKQLKVESDNLMAINFINKASVVWDEVEVEVARIWDLIPSFLKIDFSFVPSSLNIDLTPEELEVSQILSELPLLIQKFALDSSLQLRESSPATLSSSTQSNENVNVKRSNNS Homology
BLAST of Spg028180 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 119.8 bits (299), Expect = 5.7e-23 Identity = 73/202 (36.14%), Postives = 107/202 (52.97%), Query Frame = 0
BLAST of Spg028180 vs. NCBI nr
Match: XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia]) HSP 1 Score: 113.2 bits (282), Expect = 5.4e-21 Identity = 62/171 (36.26%), Postives = 97/171 (56.73%), Query Frame = 0
BLAST of Spg028180 vs. NCBI nr
Match: XP_030958792.1 (uncharacterized protein LOC115980708 [Quercus lobata]) HSP 1 Score: 96.7 bits (239), Expect = 5.2e-16 Identity = 57/198 (28.79%), Postives = 95/198 (47.98%), Query Frame = 0
BLAST of Spg028180 vs. NCBI nr
Match: XP_023891683.1 (uncharacterized protein LOC112003714 [Quercus suber]) HSP 1 Score: 96.3 bits (238), Expect = 6.8e-16 Identity = 56/213 (26.29%), Postives = 101/213 (47.42%), Query Frame = 0
BLAST of Spg028180 vs. NCBI nr
Match: XP_023880941.1 (uncharacterized protein LOC111993328 [Quercus suber]) HSP 1 Score: 94.4 bits (233), Expect = 2.6e-15 Identity = 53/179 (29.61%), Postives = 92/179 (51.40%), Query Frame = 0
BLAST of Spg028180 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.8e-23 Identity = 73/202 (36.14%), Postives = 107/202 (52.97%), Query Frame = 0
BLAST of Spg028180 vs. ExPASy TrEMBL
Match: A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.6e-21 Identity = 62/171 (36.26%), Postives = 97/171 (56.73%), Query Frame = 0
BLAST of Spg028180 vs. ExPASy TrEMBL
Match: A0A803PE40 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.3e-14 Identity = 67/201 (33.33%), Postives = 96/201 (47.76%), Query Frame = 0
BLAST of Spg028180 vs. ExPASy TrEMBL
Match: A0A2N9EU90 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6036 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 6.9e-14 Identity = 80/327 (24.46%), Postives = 149/327 (45.57%), Query Frame = 0
BLAST of Spg028180 vs. ExPASy TrEMBL
Match: A0A7N2RFA1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 6.9e-14 Identity = 56/177 (31.64%), Postives = 92/177 (51.98%), Query Frame = 0
BLAST of Spg028180 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 9.5e-08 Identity = 55/196 (28.06%), Postives = 80/196 (40.82%), Query Frame = 0
BLAST of Spg028180 vs. TAIR 10
Match: AT1G10000.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 2.9e-04 Identity = 50/186 (26.88%), Postives = 78/186 (41.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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