Spg028118 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg028118
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold2: 43831419 .. 43840126 (+)
RNA-Seq ExpressionSpg028118
SyntenySpg028118
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGAGGTCTTCTTCCGCCATACGACAGAGAATGCAACAAAAAGGCCTGATCAAGCAAGGGATCTTTCTGGAGAGTCGATCAAGAGTGCTAACTCTTCCATGGATTACCTGGCAAATGAAAAAATGCACCTTTTTTTGGGACTTTCACCTTCCACAACATGGAAAAAATGGACAAATCGGTAGGAGATGAGTCTAGCAAGCAATGGAAAAAGGATCGATAAGAGAAACCAATGGAAGGGCTGGGACTCCACATACGGAAATCCCTTCTCGACGCACTAAAAGTGATCTCCTCAATCAAGGACAAAAGAGACAGGAGGTCTGTAGTATCTCTATCAGACAATGAATGCACGAAGCCAAAAGAATAGGATAAAGAGCTCCCTGAAGGATGCAAAACCTCAGCCATAGAGTGATTTTTCATAGAAGATAAATGACAAAGTCGAGGAAAAGTAGCACAAGGGAGTTTATCTCCCACCCACCTGTCTTCCCAAAAATATGTATCCTCCCCATTCCCCACAGAACACCGAATAAAAGAGGTCAAAGAAGGGAGTTCATGAGAAATTTCTTTCCAGGGATTTCTAGAAGTGCCTTTGATCCCTCCATCACCCATTCAGAAGGATGAGGACCATATTTGCTAACAATAATCCTATGCCACAGGGTGTTGGATTCGGAATAGCCATTTAGCCAAAAGAGCTTTGTTACGGATTCTCAAATTACCCACCTCAAGCCCCCCCTCCCCCCATCTTAAAGGCCTCCCCACTAAGTCCTAGCTCACCAAATGCACAGACTTGTCTTCATCCACTCCTTCCCACAGAAAGTCCCTCATCAGCTTCTCGAGAGCCTTACATATTGAACAGGGGGCTCTAAAGAGGGATTGATTGATTGTCAATTGTGATGGAGATCGAGTGTGTGGCCACTTCGTGCTTTTGTTTGAAAGTGTGGTCTCAGGGCTCTCATGGGGAAGAAATAAAAATGCCCTAGTTGAAAATTAAAACTTAAAAAAAAAACAAATAACAAAGCCCAAATTAAATTGGGCCATAGGTGGGCTTTTTTTTTTTTTTTTAACATGTCTCTGTGTGTCCTCCGCGTGTCCCCCACTTGTCCCCTGTGTGTCGGAAAATAAAAAAAATAATAATAAAAAAATAAGACACGCCAAATGGTGTGTCGGACACGTGTCGAAGTGTGTCGGTGTCGGACACACTTCATCATTTTAGAGGTGTCCGTGCTTTATAGCATACTAGTATCCATGGTCCTATTTTTTAAAGTAACCCTTTTGCTTGTCTGGAATGCAAATGCAAAAATCCGTAGCTGGTGGTAGACTGAAGCATTTTTACCTCTTCATATGATACAAGATATATTTTTTTTATCCTTCTGTTACCACCAGGCAACACTTTGTTTTTGTTTCAACAGTGCCGGAATCAAATTTCTTTCTAAGGCAGTCCTAAAATAAAAATTTAGAGGGATAAATTGTAAGGAAAGCGTAATACTAAATTCTTTCATCGCATTTTAGCAGCCCGTGAAAGGAAAAATATGATTTCAGAAGTTCTTTCCCGCAATGGCTATAGTTTGCTCTCATCTGGGGATATTGAAAAAGAGTTTATTGCTTTTTATCAAGCTCTTTATACCAAGGATGATAGTCCTTGCTTCCTTCCTAGTAATATAGGTTGGTGCCTTATAAAGGCAGAAATGGCTGATGATTTAGAAAAAGAATTCACTAAGGAAGTTCTTCTTGTTGTTAAATCTTTGGGATCAAGTAAGTCTCCAAGATCGGATGGTTTAACTGCTGAATTCTTTAAACACTCGTGGCTTACTATCAAATCTGATATTATGTCCATGGTTGAAGAATTTTTTAACTTAGGTGTTTCTAACAATGCACTGTATGAAACATATATATGCTTAATTCCCAAGAAATTGGATGCGAAATCAGTGACTGATTATTGCCCTATTAGCCTTATTCCTCGTGCCTACAAGATTACTACTAGAGTCCTATCTAATTGATTAAAGCAGGTTTTATCTCACACTATTGCTGAAAACCAAATTTTGGATGCATCGCTAATTGCCAATGAGGTGATTGACGACTGGAAAACCTCTAAAAGGAAAGGTTTAATAATCTGGAAAAAGCTTTTGATAAAGTAGATTGGGACTTTTTGGATGCGATATTATATGTTAAAGCCTTCAGTTCAAAATGGAGAAATTGGATCCATGGATGCATCTCTTCTATTTTCGATTCGATTATTATTAATGGGAGGCCTTTGAGGTATAATTCTAGCCTCAAGGGGTATTTGGCAGGGAGATCCGGTTTCCCCTTTTCTTTTTATTCTGGCTTCTGATTGTCTCAGTCGATTATTATCGCATGGTGCATAGTTGAGTTGAATTTTGGCTCATTGAGTTTGTAACTCTCCTGTCAAGCTAAACCATTTGCAATTTGTTGATGACATGTTACTGTTTTCCATTTTTGATGTGAAAGCTCTGGAAAATATGTTTGATCTTATCAAGCTCTTTGAATTGGCCTTTGGTTTGAATATTAATTTTGATAAAAGCGAGATTTTCGGAATCCACGTTGACGATAATGAGATGAATTGGCTGAGGACAACCTTTGGATGTAAACAAGAATATTGGCCTACAACATATCTTGTTGTTCCTTTGGGTGAAATTCAAAATCTATCTCCTCCTGGCAGCCTGTGATGGAGAAAATTCAGTTTAAACTTCATAATTGGAAGTATGTCTTTATCTCAAAAGGTGGTAGACATACTCTTTCACAAGCAACTATTTCAAGAATGCCTATATATTACTTTTCTTTGTTTAAACTTCCAACGAAGGTTGCCAAGATATTGGATAAACTCGTTCGAAACTTTTTTTTGGGAATGAGCGAGAGGGGATTGTGGTATGCATCATATTAATTGGTAGAAAACTAAGCTTCCTATTCTCTTGGTTGGATTGACTATTGACCAGTGACCACTTTAAGGAAAGAAACTTGTCTCTCTTGGCTAAATGGATATGGAGATTCTTACCTGAGAACAGTGTTTTCAAAGCGCAAGGCGCACCTCAAGGCGACAAGCCCCTTGATCGCCTCAAGGCGAGAGGCGACAAAAAGACGACGCCCGAGTGAAGTGAGGCGCAATAAATAGAAATATAAATAAATAATATATATATATATAGAGCATAAATTTCTATAGTAAATATAATTACATAAAGTGTCAAATTCTTATCCTCCTTACACATTAATATTGAATAGTAAAAACATATAATGGCCAAAACATCAAACAAGAAACAATTTCTAGTAGTTCCAAAAAACCATGAAGACAAGACTTTTTTTTTTTTTTGTTTTTTTGAAAAAATGAAGACAAGACTTAAGAGTGAACAAAAACTAAAAGTCTAAAAGCCAAAAGTAAAACATTAAATGTCAAAATCATCATCCTCCTCTCCTTCCAAATCTAAGGCCTCATCTACTGCTCCTCTTTGGCCATTATCTTCTTCAATATCCATTAGATACTAGCACGAGCTACGTCTCCCCCTGAGAAATGAAACTCGCCTGATAAACAATAGCTTTATTAAGTTATGTCAACATAATTAAAAAAAAAAAAGATCACAAACGGCAACTTCAATCAGGCGAGCGCCTGTGTCACAGGCGACCAAAGGCGCAAAAAGGCGCTCGCCTGATTGAATCTACTCGCCTCAGCTACCTACGAGGCGCATAGGCCCCTGGGCGCCTCGCCTCTCGCCATAAGCGAGCGCCTGGGGTCGCCTCAATAACACTGCCTGAGAAAGGATCTCTTTGGTACAACATTATTGTGAGTAAATATTATTCATCTAATGATAAATGTTTGTGGCCAAAACACATTGTTAGAGGTCCTTATTAAATCTTCCTGGAGCTTTATTTGCAACACCACTGATCTAAATGAAAATCTGGCTCAAAGAGTTCTTGGAAATGATCCAGATATATCTTTCTGGCATGATTCATGGTTACCTTACAGAATTATAACAGATGCTTTTCCAAGATTATTTCGCCTAACTACTCGCCCTAATATGTCAATTGATCAAGCATTGAATAACATAAAAGAGGCTTGGGATTTGAGTCCTCGTCGTCATCCTAATGATTTGGAGGTGATTGAATAGTCAAATCTTTTCAATCTTCTCTCATCTATAACATTGAGATCCCGCGATCTGAAGCTCTGAGGAAATGTATGACATTGAACCCTGTAGAAAGTGATGGCGAACGAAGTGTCCTTAGTGAGTACGGCTATTTTGATATGTTTTGTTCGCTCATGAAACACATCATTGTGTGCTATTTGGATAGCATTCTTGTTGTCACAAATGAGAATAGTAAGCCCAAAAAAAAGTTAATAAATGATTCTTGGTGTTGTTCCTCTCATGTCTGATTTGTTGATGATTCTGATTCTTCATCCAAGTGCCTTTATTTGGGAATTTGGAAAGAAAATCAAAATATTTTTATTGAAACTTAGCCACGAAGATATTGATACCGCGATTGTTGTTCCTCTCATGTCTGATTTGTTGATGATTCTGATTCTTCATCCAAGTGCCTTTATTTGGGGATTTGGAAAGAAAATCAAAATATTTTTATTGAAACTTAGCCAGGGAGATATTAATACCGCGATTGCAATGGAGAATGCCACATTCGACTCTCTCTCCATTATGTTGCTTGATGTGTTATTCATCTTCTGAGAATCACTGCTACTTGTTTGCTCTTATGGCTCTCAGTATTGGCTCATTATGATGGAAGCACTTGGTTGGCAATTGAGTCTACCAGATAATATTTTTAGTATTCTTGACTCCGTTTTTATGGGACATCATTTTCATGGCGTGAAAAAACTATTATGGTTAGCTATAAATAGAGCCTTCTTCTTGTATCTATGGTGTGTGTGAGCGAAATGAAAGACTTTTCAGGGATGTCTCTTCAACCTTTGATGAATTTTTTGATTTAATTCTTTTTCATGCTTTGTAATGGTGTAAACATAAATACCATTTTGCTAACTATGGTCTTGCTACTGTAATTTCTAATGGGAGAACTTTATTCTAATTCATCTTTAGGTGTTGGGTTTTTTCCACCAACCCTTATTTCATATCAATGATATATGTTTCTCTTTCAAAAAAAAAAAAAAATAATAATAATAATAATAATAAAATAAAATAAAATAATAATAAAATAAAACAAAATAACGTTATTAATTCAACTATTGTAGTATGTCAGATTGTAAGACTTGGGAGCATGCTTGTTTGTTGTCTTTGTTTGCAACTATTTGAAGAAGATTCATCTTTCACTTCTTTGACTTGAATATTGACTCTTTCTTCATTAACTTGCAGGTGAAAGTCTTTGACAGAACAACAGTCGAAACAACCAACGCAGAAACTGAGGTTGTGAAGCCACCTGGGATACAAGAAGCGATCAATTCGGAAATAGGTAATGGAAATACTGAGATCTTTATTCGCTTAGTTAATTTTGTTGCAAGTTTCAACTCACACACTGCATAAATGATCTTAGTTAATTTTGTTCCGACACGGACACACTAGCCAAACTAAAGTGTCCATGCTTCTTAGGTCTGTGGGGCCCATAATAAAGTGTTGGAATAGGAGTTAATAAGTTTGTGGGGTCCACAATAGAGTGTTGTAATTGGTTAATAAGTTTGTGGACTCCACAATTGGGTGTTATATGTTCTTGGGCCAAACAAGGAGTTGGGTGAAGTTAATAACTCCACTCAACTCTAACTCCCCTCGACTCCTTGGGCCAAACACTCCCTTAGCATTCTTAACTAAAATGATCTGTATTCTTAAGAATATGTAGTTAAGGGTCAATTCTCTGTTTCTATCCAGTTCCAGGCTGTGAATGGTGATTCTAGGTGGATTTCAGGGGTTTATGGCCCTCCTAGACCGAGAGGTAGGGGGGCTTTGGGAGGAGTTGGGTGGTCTTTTTGGTTTATGTGGTCCGTGTTGGTGCATGGCCGGTGATTTTAATGTTATTCGTTCTCCCCTTGAGAAAGCTTCGGGGGGTCGTGAGACGAAATCCATGAGAAGGTTCAATGATTTCATAGAAGGTAGTCAATTAGTGGACCCTCCTCTGGTCAATGGGCGGTTTACTTGGGCCAACAATAGGGCTAGAAGCAGAATTGATAGATTTTTGTTTTCTAGAGGTTGGATGGAGGCGTTTGGGTTTGTGAGACAAGAGGTGGGTCCCTGGGTAACCTCGAATTATTGGCCCCTTATCTGTAAGGCTAGAGCTGTTAATTGGGGCCCTTGCCCGTTTAGGTTTGAAAATATGTGGTTGGACCACCCGTCCTGTAAATCCTCTTTCCCGTCCTGGTGGAACTCGGAAATTAGTGGTAATTGGGAAGGATTATGGGCAAGCTGAGAGTTTTGAAAGGGGCTTTTAAAGTGTGGAATCGGGAGGTGTTCAGGGATGTCAAGAGAAAGAAACAGGAGATTCTAGGAAGGATCAAAGCTTTAGATGATCTAGAAGAAAGGGGGAGTTTAGAGGAGAGTCTTAAAGAGGAGCGCTTGAGATTAAAAATGGAGTTTGTGGAGGTGGTTAGGAAAGAAACTAGTGGTTGGAGGCAAAAAGCCAAGATAAATTGAGCCAAGGGGATTGCAACTCGGCTTTCTTTCATCGGGTGGCTAGTGGTAGGAAAAGTAAGAATATCATCAATTCCTTGGTTACGAGGGAAGGGGAAGAGGTGAGAGATCCTAGGGCTATTGAGGTAGAAATTCTTTCGTTCTTCTCGAGTTTGTATGGGCCCTGATAGTTGGTAGACCTTTTGTGGAGTGGCGGGCTAGAAATAGGTAACTTAAGGATCCGTAACAGACCCATGTTAGCTAAATGGTTGTGGCAGTTCCCCCTTGAGTCTACATCCTTATGGCACCGTATTATTGTGAGTAAATATGGCACTCACCCCCATGAATGGATGTCGGGAGGGGTTAATGGTATGTCTAGGAATCCGTGGAGAGAGATTGCTTTCGAGCTCCCTTCTTTTTCGGGTCTTCTTCAATGTCACGTTGGAGATGGTAATAATATTTATTTTTGGGAGGACAAGTGGGTGGGGGATAGTTCTCTCTACTCTAAATTTCCTAATCTCTATCGCTTGTCCTTGATGAAAAACCGATCGATCGTCGATGTTCTTAATCAGAGTGGGAGCTCAATGTCCTCGTTGGGTTTTCGTCGATCTTGGACCAATAGGGAAACAACGGAGGTTACTAATCTCTTATCTTTGATAGGGGATTGTCAGTTTAGGGTGGAAAGAAGGGATGTTCGTTCTTGGAGTCTTAGCCCATCTGAGAGTTTCTCTTGTCGGTCCCTTTTTCGGTGGTTTCTTAATCCCTCTTCCCCTAGCGAGTCGGTTTTTTCTATTCTGTGGAGAGTAAAATCCCGAGAAAGATAAGGTTCTTTATCTGGCAAGTCATCCACGAAAGATTTAATACGATTGATAAGCTCTCGAGGAAGATGACTTCGTTGGTTGGTCCGTTTTGTTGTATTTTATGTCGGAAGGCGGAGGAAGATCTGGACCATATTTTATGGAACTGTGAGTTTGCTTGTTTGATATGGGGTTTGTTTCACAACGCATTTGGGCTACAGGCGAGACACTTCAGAGACTACAGGGAGATGATCCTGAAGTTCCTCCTTCGTCCACCGTTCCGCGATAAGGGGAGGTTTTTATGGTTATCTGGGGTGTGTGCTGTTTTATGGGGTCTTTGGGGTGAGAGGAATAATAGGGTGTTTCGAGATCTTGAGAGGAGTCCTTCTGATGTATGGGCTCTCACTAGATTCTATGTTTCTCTCTAGGATTCGGTGTCTAAGGCTTTTTGTAATTACTCCTTAGGTTCTATTATTTTGGACTGGTGACCTTTCCTTTAAAGGGAGGTCTTTTTGTGGGCTGGTTTTTTTTGTATGCCCTTGTATTCTTTCATTTTTTCTCAATGAAAGCTGGTGTTATTATAAAAAAAAAATAATAATAAAAAAAAAAATTCTTAATTTGCATGATAGGAAGTGGTCCAAGAATTCATAATTCACACAATGGAAAGTAGTCCAAGATGTAGAGTAATACGTGGTCTCTTCAATAGCAAGATATCCCCAACATTGTCACCCTACCCAAAACCAAAATCAAAAGGAACATGTCTTAAGTTGATGTAATCCATTAAGTTTTTCCATTTATCTAGGCATTAAGTTCCGAAATTCACTTTTAACAACAGCCATGTGATTCATACGTTTGAGAAGATCCTAGTGAGATTTGTGATTGTGTTGTTTTTTCTTCGTTTCTCTCTGAAAGTTAAACTCTAAAATTGTTTTATAATTATTCCACCTCTCCTGTTAATTCCGTTGGACTTTTTTGGCATCTCCTTTGGTGTTTTTGTATGTTTCATCCTTTTCAATAAGATCTGTTTCTTATATTTCATTTCAGCTAAACTAGATAGATGGTTTCCTTTAGATATGAGATCCTTTTCTCCTTTGAAACTGCATTACATGATATCCCCTTGATCAGCTCTAGTTTTCATACCTTTTCTTCAAACAATAATGTCCACGATTGGTTTTGTTTGTTGTCGCAGCAAAATATCCTCAAGGACGTTCTTTCATCAGGCCATCAGGAACCGAGGACGTTATTCGTGTCTATGCAGAGGCATCCACGCAGGAAGCAGCAGATAGTCTAGCTAGCTCGGTAGCGAAAATAGTAGACCAATTCCTTGGGGTTGGCAGCTCAAAATAA

mRNA sequence

ATGGTCGAGGTCTTCTTCCGCCATACGACAGAGAATGCAACAAAAAGGCCTGATCAAGCAAGGGATCTTTCTGGAGAGTCGATCAAGAGTGCTAACTCTTCCATGGATTACCTGGCAAATGAAAAAATGCACCTTTTTTTGGGACTTTCACCTTCCACAACATGGAAAAAATGGACAAATCGTTTGCTCTCATCTGGGGATATTGAAAAAGAGTTTATTGCTTTTTATCAAGCTCTTTATACCAAGGATGATAGTCCTTGCTTCCTTCCTAGTAATATAGGTTGGTGCCTTATAAAGGCAGAAATGGCTGATGATTTAGAAAAAGAATTCACTAAGGAAGTTCTTCTTGCCCCTGGGCGCCTCGCCTCTCGCCATAAGCGAGCGCCTGGGGTCGCCTCAATAACACTGCCTGAGAAAGGATCTCTTTGGTACAACATTATTGTGAAAGTCTTTGACAGAACAACAGTCGAAACAACCAACGCAGAAACTGAGGTTGTGAAGCCACCTGGGATACAAGAAGCGATCAATTCGGAAATAGGTGGATTTCAGGGGTTTATGGCCCTCCTAGACCGAGAGGTAGGGGGGCTTTGGGAGGAGTTGGGTGGTCTTTTTGGTTTATGTGGTCCGTGTTGGTGCATGGCCGGTGATTTTAATGTTATTCGTTCTCCCCTTGAGAAAGCTTCGGGGGGTCGTGAGACGAAATCCATGAGAAGGTTCAATGATTTCATAGAAGGTAGTCAATTAGTGGACCCTCCTCTGGTCAATGGGCGGTTTACTTGGGCCAACAATAGGGCTAGAAGCAGAATTGATAGATTTTTGTTTTCTAGAGGTTGGATGGAGGCGTTTGGGTTTGTGAGACAAGAGGCGGAGGAAGATCTGGACCATATTTTATGGAACTGTGAGTTTGCTTGTTTGATATGGGGTTTGTTTCACAACGCATTTGGGCTACAGGCGAGACACTTCAGAGACTACAGGGAGATGATCCTGAAGTTCCTCCTTCGTCCACCGTTCCGCGATAAGGGGAGGTTTTTATGGTTATCTGGGGTGTGTGCTGTTTTATGGGGTCTTTGGGCAAAATATCCTCAAGGACGTTCTTTCATCAGGCCATCAGGAACCGAGGACGTTATTCGTGTCTATGCAGAGGCATCCACGCAGGAAGCAGCAGATAGTCTAGCTAGCTCGGTAGCGAAAATAGTAGACCAATTCCTTGGGGTTGGCAGCTCAAAATAA

Coding sequence (CDS)

ATGGTCGAGGTCTTCTTCCGCCATACGACAGAGAATGCAACAAAAAGGCCTGATCAAGCAAGGGATCTTTCTGGAGAGTCGATCAAGAGTGCTAACTCTTCCATGGATTACCTGGCAAATGAAAAAATGCACCTTTTTTTGGGACTTTCACCTTCCACAACATGGAAAAAATGGACAAATCGTTTGCTCTCATCTGGGGATATTGAAAAAGAGTTTATTGCTTTTTATCAAGCTCTTTATACCAAGGATGATAGTCCTTGCTTCCTTCCTAGTAATATAGGTTGGTGCCTTATAAAGGCAGAAATGGCTGATGATTTAGAAAAAGAATTCACTAAGGAAGTTCTTCTTGCCCCTGGGCGCCTCGCCTCTCGCCATAAGCGAGCGCCTGGGGTCGCCTCAATAACACTGCCTGAGAAAGGATCTCTTTGGTACAACATTATTGTGAAAGTCTTTGACAGAACAACAGTCGAAACAACCAACGCAGAAACTGAGGTTGTGAAGCCACCTGGGATACAAGAAGCGATCAATTCGGAAATAGGTGGATTTCAGGGGTTTATGGCCCTCCTAGACCGAGAGGTAGGGGGGCTTTGGGAGGAGTTGGGTGGTCTTTTTGGTTTATGTGGTCCGTGTTGGTGCATGGCCGGTGATTTTAATGTTATTCGTTCTCCCCTTGAGAAAGCTTCGGGGGGTCGTGAGACGAAATCCATGAGAAGGTTCAATGATTTCATAGAAGGTAGTCAATTAGTGGACCCTCCTCTGGTCAATGGGCGGTTTACTTGGGCCAACAATAGGGCTAGAAGCAGAATTGATAGATTTTTGTTTTCTAGAGGTTGGATGGAGGCGTTTGGGTTTGTGAGACAAGAGGCGGAGGAAGATCTGGACCATATTTTATGGAACTGTGAGTTTGCTTGTTTGATATGGGGTTTGTTTCACAACGCATTTGGGCTACAGGCGAGACACTTCAGAGACTACAGGGAGATGATCCTGAAGTTCCTCCTTCGTCCACCGTTCCGCGATAAGGGGAGGTTTTTATGGTTATCTGGGGTGTGTGCTGTTTTATGGGGTCTTTGGGCAAAATATCCTCAAGGACGTTCTTTCATCAGGCCATCAGGAACCGAGGACGTTATTCGTGTCTATGCAGAGGCATCCACGCAGGAAGCAGCAGATAGTCTAGCTAGCTCGGTAGCGAAAATAGTAGACCAATTCCTTGGGGTTGGCAGCTCAAAATAA

Protein sequence

MVEVFFRHTTENATKRPDQARDLSGESIKSANSSMDYLANEKMHLFLGLSPSTTWKKWTNRLLSSGDIEKEFIAFYQALYTKDDSPCFLPSNIGWCLIKAEMADDLEKEFTKEVLLAPGRLASRHKRAPGVASITLPEKGSLWYNIIVKVFDRTTVETTNAETEVVKPPGIQEAINSEIGGFQGFMALLDREVGGLWEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARSRIDRFLFSRGWMEAFGFVRQEAEEDLDHILWNCEFACLIWGLFHNAFGLQARHFRDYREMILKFLLRPPFRDKGRFLWLSGVCAVLWGLWAKYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLGVGSSK
Homology
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BLAST of Spg028118 vs. NCBI nr
Match: VVA41200.1 (PREDICTED: RNA-directed DNA polymerase, partial [Prunus dulcis])

HSP 1 Score: 119.8 bits (299), Expect = 5.6e-23
Identity = 58/117 (49.57%), Postives = 74/117 (63.25%), Query Frame = 0 

Query: 197 WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNG 256
           WEEL GLFGLCG  WC+ GDFNV+R   EK++GGR T SM+ FNDFI+ + L DP L+N 
Sbjct: 86  WEELAGLFGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKTFNDFIDDTNLRDPNLLNA 145

Query: 257 RFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEEDLDHILWNCEFACLIWG 309
            FTW+N R  +   R+DRFLFS  W ++F  V+    A    DH     + + L WG
Sbjct: 146 SFTWSNFRENAVCRRLDRFLFSEEWEDSFPHVKHTALARVTSDHCPIMLDTSILKWG 202

[Close]
BLAST of Spg028118 vs. NCBI nr
Match: VVA21938.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 119.0 bits (297), Expect = 9.5e-23
Identity = 58/117 (49.57%), Postives = 74/117 (63.25%), Query Frame = 0 

Query: 197 WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNG 256
           WEEL GLFGLCG  WC+ GDFNV+R   EK++GGR T SM+ FNDFI+ + L DP L+N 
Sbjct: 86  WEELAGLFGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKIFNDFIDDTNLRDPNLLNA 145

Query: 257 RFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEEDLDHILWNCEFACLIWG 309
            FTW+N R  +   R+DRFLFS  W ++F  V+    A    DH     + + L WG
Sbjct: 146 SFTWSNFRENAVCRRLDRFLFSEEWEDSFPHVKHTALARVTSDHCPIMLDTSILKWG 202

[Close]
BLAST of Spg028118 vs. NCBI nr
Match: TYK22164.1 (peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 9.5e-23
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 0 

Query: 197 WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNG 256
           WEELG L+  CG  WC+ GDFNV+ SP EKA GG+ T+S+R FN+FI+ S L DPPL+ G
Sbjct: 185 WEELGDLYRYCGLRWCVVGDFNVVHSPDEKALGGKITRSIRCFNNFIDDSGLFDPPLIEG 244

Query: 257 RFTWANNRARSRIDRFLFSRGWMEAFGFVRQE 289
           +FT AN RA +RIDR L S+ W+E FG + +E
Sbjct: 245 KFTCANCRASTRIDRVLMSKAWIERFGTLGRE 276

[Close]
BLAST of Spg028118 vs. NCBI nr
Match: KAA0032235.1 (peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 9.5e-23
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 0 

Query: 197 WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNG 256
           WEELG L+  CG  WC+ GDFNV+ SP EKA GG+ T+S+R FN+FI+ S L DPPL+ G
Sbjct: 235 WEELGDLYRYCGLRWCVVGDFNVVHSPDEKALGGKITRSIRCFNNFIDDSGLFDPPLIEG 294

Query: 257 RFTWANNRARSRIDRFLFSRGWMEAFGFVRQE 289
           +FT AN RA +RIDR L S+ W+E FG + +E
Sbjct: 295 KFTCANCRASTRIDRVLMSKAWIERFGTLGRE 326

[Close]
BLAST of Spg028118 vs. NCBI nr
Match: XP_028075126.1 (uncharacterized protein LOC114277426 [Camellia sinensis])

HSP 1 Score: 117.1 bits (292), Expect = 3.6e-22
Identity = 64/140 (45.71%), Postives = 84/140 (60.00%), Query Frame = 0 

Query: 197 WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNG 256
           W+ELGGLFGLC P WC+  DFNV+R   EK +G    +SMR F+ FI   +L+DPPL N 
Sbjct: 121 WDELGGLFGLCTPNWCVGWDFNVVRLASEKLNGVSTNRSMRDFDSFIRECELIDPPLSNA 180

Query: 257 RFTWAN---NRARSRIDRFLFSRGWMEAFGFVRQEAEEDL--DH---ILWNCEFACLIWG 316
           RFTW+N   NR   R+DRFL + GW E F  +R+E    +  DH   IL +C F    WG
Sbjct: 181 RFTWSNLQENRVCRRLDRFLHTLGWEELFLNIRKEVRPRVVSDHFPVILESCPFK---WG 240

Query: 317 ----LFHNAFGLQARHFRDY 325
                F N + L+ R F+++
Sbjct: 241 PSPFRFENMW-LENRSFKEF 256

[Close]
BLAST of Spg028118 vs. ExPASy Swiss-Prot
Match: P57750 (Phosphoacetylglucosamine mutase OS=Arabidopsis thaliana OX=3702 GN=DRT101 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.7e-12
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 359 KYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG 405
           KY +GR+FIRPSGTEDV+RVYAEASTQE ADSLA+SVA++V  FLG
Sbjct: 509 KYSRGRAFIRPSGTEDVVRVYAEASTQEDADSLANSVAQLVKSFLG 554


HSP 2 Score: 43.1 bits (100), Expect = 8.7e-03
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 146 IIVKVFDRTTVETTNAETEVVKPPGIQEAINSEI 180
           I V+V DRT V TT+ ETE ++P GIQ+AINSEI
Sbjct: 474 IKVEVPDRTAVVTTSEETEALRPMGIQDAINSEI 507

[Close]
BLAST of Spg028118 vs. ExPASy Swiss-Prot
Match: Q6ZDQ1 (Phosphoacetylglucosamine mutase OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0195400 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-09
Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0 

Query: 347 SGVCAVLWGLWAKYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG 405
           +G+  ++ G  + Y  GR F+RPSGTEDV+RVYAEAS++EAAD LA  VA+ V++ LG
Sbjct: 505 NGLQELIDGEISNYSHGRCFVRPSGTEDVVRVYAEASSEEAADCLAKRVAQHVERILG 562

[Close]
BLAST of Spg028118 vs. ExPASy Swiss-Prot
Match: Q09687 (Phosphoacetylglucosamine mutase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC13C5.05c PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.1e-08
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 0 

Query: 356 LWAKYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIV 400
           L AKY +GRSF+R SGTEDV+RVYAEAST++AAD L   V ++V
Sbjct: 474 LVAKYEKGRSFVRASGTEDVVRVYAEASTKQAADELCEKVCQLV 517

[Close]
BLAST of Spg028118 vs. ExPASy Swiss-Prot
Match: Q9CYR6 (Phosphoacetylglucosamine mutase OS=Mus musculus OX=10090 GN=Pgm3 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.5e-07
Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 359 KYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG 405
           KY   R+F+RPSGTED++RVYAEA++QE+AD LA  V+ +V Q  G
Sbjct: 487 KYTLARAFVRPSGTEDIVRVYAEANSQESADRLAYEVSLLVFQLAG 532

[Close]
BLAST of Spg028118 vs. ExPASy Swiss-Prot
Match: O95394 (Phosphoacetylglucosamine mutase OS=Homo sapiens OX=9606 GN=PGM3 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.6e-07
Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 0 

Query: 359 KYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG 405
           KY   R+F+RPSGTEDV+RVYAEA +QE+AD LA  V+  V Q  G
Sbjct: 487 KYKLSRAFVRPSGTEDVVRVYAEADSQESADHLAHEVSLAVFQLAG 532

[Close]
BLAST of Spg028118 vs. ExPASy TrEMBL
Match: A0A5E4GN72 (PREDICTED: RNA-directed DNA polymerase (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B014918 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.7e-23
Identity = 58/117 (49.57%), Postives = 74/117 (63.25%), Query Frame = 0 

Query: 197 WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNG 256
           WEEL GLFGLCG  WC+ GDFNV+R   EK++GGR T SM+ FNDFI+ + L DP L+N 
Sbjct: 86  WEELAGLFGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKTFNDFIDDTNLRDPNLLNA 145

Query: 257 RFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEEDLDHILWNCEFACLIWG 309
            FTW+N R  +   R+DRFLFS  W ++F  V+    A    DH     + + L WG
Sbjct: 146 SFTWSNFRENAVCRRLDRFLFSEEWEDSFPHVKHTALARVTSDHCPIMLDTSILKWG 202

[Close]
BLAST of Spg028118 vs. ExPASy TrEMBL
Match: M5XUF8 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015473mg PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.7e-23
Identity = 61/135 (45.19%), Postives = 78/135 (57.78%), Query Frame = 0 

Query: 179 IGGFQGFMALLDREVGGLWEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRR 238
           + G  G     DR     WEEL GLFGLCG  WC+ GDFNV+R   EK++GGR T SM+ 
Sbjct: 388 LSGIYGLCHPRDRR--RFWEELAGLFGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKN 447

Query: 239 FNDFIEGSQLVDPPLVNGRFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEEDL 298
           FNDFI+ + L DP L+N  FTW+N R  +   R+DRFLF   W ++F  V+    A    
Sbjct: 448 FNDFIDDTNLRDPNLLNASFTWSNFRENAVCRRLDRFLFFEAWEDSFPHVKHTALARVTS 507

Query: 299 DHILWNCEFACLIWG 309
           DH     + + L WG
Sbjct: 508 DHCPIQLDTSNLKWG 520

[Close]
BLAST of Spg028118 vs. ExPASy TrEMBL
Match: A0A5D3DEZ6 (Peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00210 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-23
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 0 

Query: 197 WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNG 256
           WEELG L+  CG  WC+ GDFNV+ SP EKA GG+ T+S+R FN+FI+ S L DPPL+ G
Sbjct: 185 WEELGDLYRYCGLRWCVVGDFNVVHSPDEKALGGKITRSIRCFNNFIDDSGLFDPPLIEG 244

Query: 257 RFTWANNRARSRIDRFLFSRGWMEAFGFVRQE 289
           +FT AN RA +RIDR L S+ W+E FG + +E
Sbjct: 245 KFTCANCRASTRIDRVLMSKAWIERFGTLGRE 276

[Close]
BLAST of Spg028118 vs. ExPASy TrEMBL
Match: A0A5A7SSQ8 (Peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00550 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-23
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 0 

Query: 197 WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNG 256
           WEELG L+  CG  WC+ GDFNV+ SP EKA GG+ T+S+R FN+FI+ S L DPPL+ G
Sbjct: 235 WEELGDLYRYCGLRWCVVGDFNVVHSPDEKALGGKITRSIRCFNNFIDDSGLFDPPLIEG 294

Query: 257 RFTWANNRARSRIDRFLFSRGWMEAFGFVRQE 289
           +FT AN RA +RIDR L S+ W+E FG + +E
Sbjct: 295 KFTCANCRASTRIDRVLMSKAWIERFGTLGRE 326

[Close]
BLAST of Spg028118 vs. ExPASy TrEMBL
Match: A0A5E4F859 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035883 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-23
Identity = 58/117 (49.57%), Postives = 74/117 (63.25%), Query Frame = 0 

Query: 197 WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNG 256
           WEEL GLFGLCG  WC+ GDFNV+R   EK++GGR T SM+ FNDFI+ + L DP L+N 
Sbjct: 86  WEELAGLFGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKIFNDFIDDTNLRDPNLLNA 145

Query: 257 RFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEEDLDHILWNCEFACLIWG 309
            FTW+N R  +   R+DRFLFS  W ++F  V+    A    DH     + + L WG
Sbjct: 146 SFTWSNFRENAVCRRLDRFLFSEEWEDSFPHVKHTALARVTSDHCPIMLDTSILKWG 202

[Close]
BLAST of Spg028118 vs. TAIR 10
Match: AT5G18070.1 (phosphoglucosamine mutase-related )

HSP 1 Score: 74.7 bits (182), Expect = 1.9e-13
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 359 KYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG 405
           KY +GR+FIRPSGTEDV+RVYAEASTQE ADSLA+SVA++V  FLG
Sbjct: 509 KYSRGRAFIRPSGTEDVVRVYAEASTQEDADSLANSVAQLVKSFLG 554


HSP 2 Score: 43.1 bits (100), Expect = 6.2e-04
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 146 IIVKVFDRTTVETTNAETEVVKPPGIQEAINSEI 180
           I V+V DRT V TT+ ETE ++P GIQ+AINSEI
Sbjct: 474 IKVEVPDRTAVVTTSEETEALRPMGIQDAINSEI 507

The following BLAST results are available for this feature:
BLAST of Spg028118 vs. NCBI nr
Match NameE-valueIdentityDescription
VVA41200.15.6e-2349.57PREDICTED: RNA-directed DNA polymerase, partial [Prunus dulcis][more]
VVA21938.19.5e-2349.57Hypothetical predicted protein, partial [Prunus dulcis][more]
TYK22164.19.5e-2357.61peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa][more]
KAA0032235.19.5e-2357.61peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa][more]
XP_028075126.13.6e-2245.71uncharacterized protein LOC114277426 [Camellia sinensis][more]
BLAST of Spg028118 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P577502.7e-1278.26Phosphoacetylglucosamine mutase OS=Arabidopsis thaliana OX=3702 GN=DRT101 PE=1 S... [more]
Q6ZDQ11.2e-0955.17Phosphoacetylglucosamine mutase OS=Oryza sativa subsp. japonica OX=39947 GN=Os07... [more]
Q096873.1e-0865.91Phosphoacetylglucosamine mutase 1 OS=Schizosaccharomyces pombe (strain 972 / ATC... [more]
Q9CYR61.5e-0758.70Phosphoacetylglucosamine mutase OS=Mus musculus OX=10090 GN=Pgm3 PE=1 SV=1[more]
O953942.6e-0760.87Phosphoacetylglucosamine mutase OS=Homo sapiens OX=9606 GN=PGM3 PE=1 SV=1[more]
BLAST of Spg028118 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5E4GN722.7e-2349.57PREDICTED: RNA-directed DNA polymerase (Fragment) OS=Prunus dulcis OX=3755 GN=AL... [more]
M5XUF82.7e-2345.19Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... [more]
A0A5D3DEZ64.6e-2357.61Peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 OS=Cucumis melo var. makuwa... [more]
A0A5A7SSQ84.6e-2357.61Peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 OS=Cucumis melo var. makuwa... [more]
A0A5E4F8594.6e-2349.57Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3... [more]
BLAST of Spg028118 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G18070.11.9e-1378.26phosphoglucosamine mutase-related [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.310.50coord: 342..404
e-value: 2.5E-18
score: 68.2
NoneNo IPR availablePANTHERPTHR45955PHOSPHOACETYLGLUCOSAMINE MUTASEcoord: 146..186
coord: 356..404
NoneNo IPR availablePANTHERPTHR45955:SF2PHOSPHOACETYLGLUCOSAMINE MUTASEcoord: 146..186
coord: 356..404
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 175..301
e-value: 4.8E-13
score: 51.4
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 199..282
IPR005843Alpha-D-phosphohexomutase, C-terminalPFAMPF00408PGM_PMM_IVcoord: 360..398
e-value: 2.7E-10
score: 40.3
IPR036900Alpha-D-phosphohexomutase, C-terminal domain superfamilySUPERFAMILY55957Phosphoglucomutase, C-terminal domaincoord: 354..404

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg028118.1Spg028118.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0071704 organic substance metabolic process
cellular_component GO:0110165 cellular anatomical entity
molecular_function GO:0016868 intramolecular transferase activity, phosphotransferases