Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGATCCCAAGAAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGAAAAGAGTCCCGCCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCATGGAGGAAAGTGAAGATTTCCTTTGTCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTACTAGCTCCTCGGGAACGGTGGCAGTTCCAGGAGACTTATCCTCCTTCAGCATAAAGGACTTACTATCACTTCCTCGGGAAGCTAAAAGCGTCCTTATTAATGCATTGATAGAGTCTGATGGTACAAACATCCCAACCTCCGAGGCACGCACATGTGCTTCGTGTTGCATGTCTATCGGATTTTCTGATGAAGATTTATTGTTAGGGTCAAAGCCACACAATAGACCTCTATTCGTCTCAGGATACATTCGAGAACAAAGGGTTAGCCGGATCCTCATCGATGATGGATCAGCTGTCAATATAATGCCTAAGTCAACCATGAAGCAGTTAGGCATCTTGATGGAGGAACTATCAAACAGTAAGTTGGTGATCCAAGGCTTCAATCAGGGTGGACAACGGGCAATTGGCATGATACGCCTTGAACTCATCATTGGAGACTTAAAAGCTGATACTTTGTTCCATGTAATAGATTCTAAGACCACCTATAAGCTGTTGTTAGGTCGTCCTTGGATCCATGGTAATGGAGTCATAACCTCCACATTGCACCAGTGCTTCAAATTCTATCAAGATGGCATCAAGAAAGTTGAAGCTGACACCAACCCATTTTCTGAAGCTGAGTCTCATTTCGCTGATGCAAAGTTTTATCTGAAGAATGAAAACACAGGGGAAACCATACCTGCAGAAATCCCCTTGATAAAAAAGAATGATAAACTCGATTTGGAGCCCCATGCAGATGCAAGAAAAGAAGCTGTTGAAGATATGGATACTTCCGACCTGAAAAAGGGTGAAGCATCTACAAGCCTTGCGAAACCTAAGGTTGTAAAGGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCCTTATCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTTCAGAAAGCATAAAGGTCGGTGATGTTGAAATTTTGAAGGAAAGTTTCACTACGCCTCTTACAAAGATCACAAGACAAGAGGTTAAGAAACCCGAGGGTGATCAGATAAAAGCGATCTTGCCTGACAGACGAACTAAAGACGGGTTCGACCCCAAGGCATACAAACTTCTAGCAAAAGCAGGTTATGACTTCACAACTCACACTGAGTTTAAAAGTCTAAGGGTTTTTGATGAAAGATCTGAGCTCTCTGCAACACAGAAGAAACTTCTAAAGGAAGGTTATAGTCTGCCTACAACAAGAAAAGGGCTTGGATATAAGTCGCCAGAGCCAGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGCAGATACAAATCATATAACAGTAGAAGAGGTTGATGACTCAAAAGAAAAAGAAAGTGTCGACCAACGAACTTTTGTTTTTAGGCGCATCAGGCCACCAGTTGCCCGTGCTTTAGTCTTTCAGAGATTAAGTGTTAATGAAGCGGAAGAAGAAAGCGCACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGATGAAGAGAGTACATTTTCAACTCCGAATGTCACTCGACCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGGGGAAGGGGAGAGTACATTTTCAACTTCGGATGTGACTCGGCCATCAGTTTTTCAGAGGTTAAGTGTTACCACGAGATGA
mRNA sequence
ATGAAGGGATCCCAAGAAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGAAAAGAGTCCCGCCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCATGGAGGAAAGTGAAGATTTCCTTTGTCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTACTAGCTCCTCGGGAACGCCCCATGCAGATGCAAGAAAAGAAGCTGTTGAAGATATGGATACTTCCGACCTGAAAAAGGGTGAAGCATCTACAAGCCTTGCGAAACCTAAGGTTGTAAAGGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCCTTATCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTTCAGAAAGCATAAAGAAGAAACTTCTAAAGGAAGGTTATAGTCTGCCTACAACAAGAAAAGGGCTTGGATATAAGTCGCCAGAGCCAGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGCAGATACAAATCATATAACAGTAGAAGAGGTTGATGACTCAAAAGAAAAAGAAAGTGTCGACCAACGAACTTTTGTTTTTAGGCGCATCAGGCCACCAGTTGCCCGTGCTTTAGTCTTTCAGAGATTAAGTGTTAATGAAGCGGAAGAAGAAAGCGCACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGATGAAGAGAGTACATTTTCAACTCCGAATGTCACTCGACCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGGGGAAGGGGAGAGTACATTTTCAACTTCGGATGTGACTCGGCCATCAGTTTTTCAGAGGTTAAGTGTTACCACGAGATGA
Coding sequence (CDS)
ATGAAGGGATCCCAAGAAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGAAAAGAGTCCCGCCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCATGGAGGAAAGTGAAGATTTCCTTTGTCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTACTAGCTCCTCGGGAACGCCCCATGCAGATGCAAGAAAAGAAGCTGTTGAAGATATGGATACTTCCGACCTGAAAAAGGGTGAAGCATCTACAAGCCTTGCGAAACCTAAGGTTGTAAAGGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCCTTATCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTTCAGAAAGCATAAAGAAGAAACTTCTAAAGGAAGGTTATAGTCTGCCTACAACAAGAAAAGGGCTTGGATATAAGTCGCCAGAGCCAGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGCAGATACAAATCATATAACAGTAGAAGAGGTTGATGACTCAAAAGAAAAAGAAAGTGTCGACCAACGAACTTTTGTTTTTAGGCGCATCAGGCCACCAGTTGCCCGTGCTTTAGTCTTTCAGAGATTAAGTGTTAATGAAGCGGAAGAAGAAAGCGCACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGATGAAGAGAGTACATTTTCAACTCCGAATGTCACTCGACCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGGGGAAGGGGAGAGTACATTTTCAACTTCGGATGTGACTCGGCCATCAGTTTTTCAGAGGTTAAGTGTTACCACGAGATGA
Protein sequence
MKGSQEKYVSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFLCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTPHADARKEAVEDMDTSDLKKGEASTSLAKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPVARALVFQRLSVNEAEEESAQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQRLNMPIGEGESTFSTSDVTRPSVFQRLSVTTR
Homology
BLAST of Spg028112 vs. NCBI nr
Match:
KAA0061113.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 181.0 bits (458), Expect = 1.7e-41
Identity = 156/480 (32.50%), Postives = 208/480 (43.33%), Query Frame = 0
Query: 4 SQEKYVSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPV 63
SQEK IE+++EGWT+V RRKK+K + +KESRL+ + +R K+QK K KKK+R+ K V
Sbjct: 467 SQEKERLIEEDDEGWTVVTRRKKRKSTLIQKESRLYINYRRGNKTQKNKKKKKTRKLKLV 526
Query: 64 MEESEDFLCPPQPITLAEYFPRRFLDDSQGEALETVT-----------------CHIVDV 123
E+ +DF + +TLA++FP RFL D Q E V C +D
Sbjct: 527 HEKDKDFPRTQRVVTLADFFPTRFLGDHQDENPGVVASASSSSAPIATYESTPYCMSIDF 586
Query: 124 VEDD-----------------------------------DVPTS---------------- 183
++D +P S
Sbjct: 587 SDEDLLLGSKLHNRPLYVSGYVQEQRVERILVDNGSAVNIMPKSTMRQLGILMEELSNSK 646
Query: 184 ---------------------SSGTPH------------------ADARKEAVEDMDTSD 243
+ G+P + A +E+ + T
Sbjct: 647 LVIQGFNQGSQRVIDAKFYLKNDGSPEVVSVEVPLVNKEDNLQLKSLASRESHKSTGTFH 706
Query: 244 LKKGEASTSLAKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK---------- 300
K EASTS AK +V DEK SN PILRYVPLSRRKKGESPF E + +K
Sbjct: 707 SGKSEASTSTAKSVIVMDEKTSNPPILRYVPLSRRKKGESPFVEFPQGLKVGDIEVLKES 766
BLAST of Spg028112 vs. NCBI nr
Match:
KAA0055957.1 (uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa])
HSP 1 Score: 180.3 bits (456), Expect = 2.9e-41
Identity = 108/236 (45.76%), Postives = 139/236 (58.90%), Query Frame = 0
Query: 124 ARKEAVEDMDTSDLKKGEASTSLAKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSE 183
A KE + + T K EAST+ AK ++ DEK SN PILRYVPLSRRKKGESPF E +
Sbjct: 188 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 247
Query: 184 SIK-------------------------------------------KKLLKEGYSLPTTR 243
+K KKLL+EG+ +P +R
Sbjct: 248 GLKRRTKDGFDPKAYKLMAKAGYDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSR 307
Query: 244 KGLGYKSPEPVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPVARALV 303
KGLGYKSPEP+RITR+GK KV D NHITV+EVD +EKE +QRT F RI P VARA V
Sbjct: 308 KGLGYKSPEPIRITRKGKKKVVDNNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPV 367
Query: 304 FQRLSVNEAEEESAQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQRLNM 317
F+RLS+ EA+ + Q T++ R S F+RL++ +E+ T T+PSAF+RL++
Sbjct: 368 FERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEKGICQTSMTTKPSAFERLSI 423
BLAST of Spg028112 vs. NCBI nr
Match:
TYK28162.1 (uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa])
HSP 1 Score: 176.8 bits (447), Expect = 3.2e-40
Identity = 108/246 (43.90%), Postives = 140/246 (56.91%), Query Frame = 0
Query: 124 ARKEAVEDMDTSDLKKGEASTSLAKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSE 183
A KE + + T K EAST+ AK ++ DEK SN PILRYVPLSRRKKGESPF E +
Sbjct: 152 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 211
Query: 184 SIK-----------------------------------------------------KKLL 243
+K KKLL
Sbjct: 212 GLKIDLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLL 271
Query: 244 KEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRR 303
+EG+ +P +RKGLGYKSPEP+RITR+GK KV D+NHITV+EVD +EKE +QRT F R
Sbjct: 272 REGHVIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEKEGDNQRTSTFDR 331
Query: 304 IRPPVARALVFQRLSVNEAEEESAQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSA 317
I P VARA VF+RLS+ EAE + Q T++ + S F+RL++ +E+ T T+PSA
Sbjct: 332 ISPHVARAPVFERLSMTEAERKDHQSTSNLDQRSAFQRLTITFKEEKGICQTSMTTKPSA 391
BLAST of Spg028112 vs. NCBI nr
Match:
KAA0043405.1 (hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa])
HSP 1 Score: 172.2 bits (435), Expect = 7.9e-39
Identity = 100/206 (48.54%), Postives = 129/206 (62.62%), Query Frame = 0
Query: 124 ARKEAVEDMDTSDLKKGEASTSLAKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSE 183
A KE + + T +KGEASTS K ++ DEK SN ILRYVPLSRR+KGESPF + +
Sbjct: 56 ASKEPHKSIGTFHSRKGEASTSTTKSMILMDEKTSNPLILRYVPLSRRQKGESPFVKFPQ 115
Query: 184 SIK-------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVE 243
+K KKLL+EG+ +P +RKG GYKSPEP+ I R+ K KV D+NHITV
Sbjct: 116 GLKVGDMKQPKLSLIQKKLLREGHVIPVSRKGPGYKSPEPIHIIRKRKKKVIDSNHITVG 175
Query: 244 EVDDSKEKESVDQRTFVFRRIRPPVARALVFQRLSVNEAEEESAQPTNSSTRPSVFRRLS 303
EVD +EKE QR F +IRP V R VF+RLSV + E + Q T+S + S +RL+
Sbjct: 176 EVDSMEEKEGGSQRISAFDQIRPHVVRTTVFERLSVTKTERKCHQSTSSLNKRSALQRLT 235
Query: 304 MPIGDEESTFSTPNVTRPSAFQRLNM 317
M E+ T TRPSAF+RL++
Sbjct: 236 MTFKKEKCTCQALRATRPSAFERLSV 261
BLAST of Spg028112 vs. NCBI nr
Match:
KAA0047672.1 (uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa] >TYK08327.1 uncharacterized protein E5676_scaffold648G001250 [Cucumis melo var. makuwa])
HSP 1 Score: 169.9 bits (429), Expect = 3.9e-38
Identity = 105/234 (44.87%), Postives = 149/234 (63.68%), Query Frame = 0
Query: 89 DDSQGEALETVTCHIVDVVEDDDVPTSSSGTPHADARKEAVEDMDTSDLKKGEASTSLAK 148
+DS EA+ ++ +V+ ++ + + +S PH + +T K EASTS AK
Sbjct: 663 NDSSPEAV-SIEVLLVNREDNFQLKSLASRKPH--------KSTETFHSGKNEASTSTAK 722
Query: 149 PKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIKK---KLLKEGYSL---PTTRKG 208
++ +E SN PILRYVPLSR KKGESPF E + +K ++LKE +++ T+KG
Sbjct: 723 SVILMNENTSNPPILRYVPLSRCKKGESPFVESPQGLKVGDIEVLKESFTIQLTKITKKG 782
Query: 209 LGYKSPEPVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPVARALVFQ 268
LGYKSPEP+RITR+GK KV D+NHITV+EVD + KE QRT F RI P VARA VF+
Sbjct: 783 LGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEGKEGHSQRTSAFDRISPHVARAPVFE 842
Query: 269 RLSVNEAEEESAQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQRLNM 317
RLS+ EA+ + Q T++ R S F+RL++ +E+ T+PSAF+RL++
Sbjct: 843 RLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEKGICQASMTTKPSAFERLSI 887
BLAST of Spg028112 vs. ExPASy TrEMBL
Match:
A0A5D3BY54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001700 PE=4 SV=1)
HSP 1 Score: 181.0 bits (458), Expect = 8.3e-42
Identity = 156/480 (32.50%), Postives = 208/480 (43.33%), Query Frame = 0
Query: 4 SQEKYVSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPV 63
SQEK IE+++EGWT+V RRKK+K + +KESRL+ + +R K+QK K KKK+R+ K V
Sbjct: 467 SQEKERLIEEDDEGWTVVTRRKKRKSTLIQKESRLYINYRRGNKTQKNKKKKKTRKLKLV 526
Query: 64 MEESEDFLCPPQPITLAEYFPRRFLDDSQGEALETVT-----------------CHIVDV 123
E+ +DF + +TLA++FP RFL D Q E V C +D
Sbjct: 527 HEKDKDFPRTQRVVTLADFFPTRFLGDHQDENPGVVASASSSSAPIATYESTPYCMSIDF 586
Query: 124 VEDD-----------------------------------DVPTS---------------- 183
++D +P S
Sbjct: 587 SDEDLLLGSKLHNRPLYVSGYVQEQRVERILVDNGSAVNIMPKSTMRQLGILMEELSNSK 646
Query: 184 ---------------------SSGTPH------------------ADARKEAVEDMDTSD 243
+ G+P + A +E+ + T
Sbjct: 647 LVIQGFNQGSQRVIDAKFYLKNDGSPEVVSVEVPLVNKEDNLQLKSLASRESHKSTGTFH 706
Query: 244 LKKGEASTSLAKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK---------- 300
K EASTS AK +V DEK SN PILRYVPLSRRKKGESPF E + +K
Sbjct: 707 SGKSEASTSTAKSVIVMDEKTSNPPILRYVPLSRRKKGESPFVEFPQGLKVGDIEVLKES 766
BLAST of Spg028112 vs. ExPASy TrEMBL
Match:
A0A5A7UMY2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00830 PE=4 SV=1)
HSP 1 Score: 180.3 bits (456), Expect = 1.4e-41
Identity = 108/236 (45.76%), Postives = 139/236 (58.90%), Query Frame = 0
Query: 124 ARKEAVEDMDTSDLKKGEASTSLAKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSE 183
A KE + + T K EAST+ AK ++ DEK SN PILRYVPLSRRKKGESPF E +
Sbjct: 188 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 247
Query: 184 SIK-------------------------------------------KKLLKEGYSLPTTR 243
+K KKLL+EG+ +P +R
Sbjct: 248 GLKRRTKDGFDPKAYKLMAKAGYDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSR 307
Query: 244 KGLGYKSPEPVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPVARALV 303
KGLGYKSPEP+RITR+GK KV D NHITV+EVD +EKE +QRT F RI P VARA V
Sbjct: 308 KGLGYKSPEPIRITRKGKKKVVDNNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPV 367
Query: 304 FQRLSVNEAEEESAQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQRLNM 317
F+RLS+ EA+ + Q T++ R S F+RL++ +E+ T T+PSAF+RL++
Sbjct: 368 FERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEKGICQTSMTTKPSAFERLSI 423
BLAST of Spg028112 vs. ExPASy TrEMBL
Match:
A0A5D3DXC7 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00760 PE=4 SV=1)
HSP 1 Score: 176.8 bits (447), Expect = 1.6e-40
Identity = 108/246 (43.90%), Postives = 140/246 (56.91%), Query Frame = 0
Query: 124 ARKEAVEDMDTSDLKKGEASTSLAKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSE 183
A KE + + T K EAST+ AK ++ DEK SN PILRYVPLSRRKKGESPF E +
Sbjct: 152 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 211
Query: 184 SIK-----------------------------------------------------KKLL 243
+K KKLL
Sbjct: 212 GLKIDLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLL 271
Query: 244 KEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRR 303
+EG+ +P +RKGLGYKSPEP+RITR+GK KV D+NHITV+EVD +EKE +QRT F R
Sbjct: 272 REGHVIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEKEGDNQRTSTFDR 331
Query: 304 IRPPVARALVFQRLSVNEAEEESAQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSA 317
I P VARA VF+RLS+ EAE + Q T++ + S F+RL++ +E+ T T+PSA
Sbjct: 332 ISPHVARAPVFERLSMTEAERKDHQSTSNLDQRSAFQRLTITFKEEKGICQTSMTTKPSA 391
BLAST of Spg028112 vs. ExPASy TrEMBL
Match:
A0A5A7TPR5 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00040 PE=4 SV=1)
HSP 1 Score: 172.2 bits (435), Expect = 3.8e-39
Identity = 100/206 (48.54%), Postives = 129/206 (62.62%), Query Frame = 0
Query: 124 ARKEAVEDMDTSDLKKGEASTSLAKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSE 183
A KE + + T +KGEASTS K ++ DEK SN ILRYVPLSRR+KGESPF + +
Sbjct: 56 ASKEPHKSIGTFHSRKGEASTSTTKSMILMDEKTSNPLILRYVPLSRRQKGESPFVKFPQ 115
Query: 184 SIK-------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVE 243
+K KKLL+EG+ +P +RKG GYKSPEP+ I R+ K KV D+NHITV
Sbjct: 116 GLKVGDMKQPKLSLIQKKLLREGHVIPVSRKGPGYKSPEPIHIIRKRKKKVIDSNHITVG 175
Query: 244 EVDDSKEKESVDQRTFVFRRIRPPVARALVFQRLSVNEAEEESAQPTNSSTRPSVFRRLS 303
EVD +EKE QR F +IRP V R VF+RLSV + E + Q T+S + S +RL+
Sbjct: 176 EVDSMEEKEGGSQRISAFDQIRPHVVRTTVFERLSVTKTERKCHQSTSSLNKRSALQRLT 235
Query: 304 MPIGDEESTFSTPNVTRPSAFQRLNM 317
M E+ T TRPSAF+RL++
Sbjct: 236 MTFKKEKCTCQALRATRPSAFERLSV 261
BLAST of Spg028112 vs. ExPASy TrEMBL
Match:
A0A5D3C8N8 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001250 PE=4 SV=1)
HSP 1 Score: 169.9 bits (429), Expect = 1.9e-38
Identity = 105/234 (44.87%), Postives = 149/234 (63.68%), Query Frame = 0
Query: 89 DDSQGEALETVTCHIVDVVEDDDVPTSSSGTPHADARKEAVEDMDTSDLKKGEASTSLAK 148
+DS EA+ ++ +V+ ++ + + +S PH + +T K EASTS AK
Sbjct: 663 NDSSPEAV-SIEVLLVNREDNFQLKSLASRKPH--------KSTETFHSGKNEASTSTAK 722
Query: 149 PKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIKK---KLLKEGYSL---PTTRKG 208
++ +E SN PILRYVPLSR KKGESPF E + +K ++LKE +++ T+KG
Sbjct: 723 SVILMNENTSNPPILRYVPLSRCKKGESPFVESPQGLKVGDIEVLKESFTIQLTKITKKG 782
Query: 209 LGYKSPEPVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPVARALVFQ 268
LGYKSPEP+RITR+GK KV D+NHITV+EVD + KE QRT F RI P VARA VF+
Sbjct: 783 LGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEGKEGHSQRTSAFDRISPHVARAPVFE 842
Query: 269 RLSVNEAEEESAQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQRLNM 317
RLS+ EA+ + Q T++ R S F+RL++ +E+ T+PSAF+RL++
Sbjct: 843 RLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEKGICQASMTTKPSAFERLSI 887
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0061113.1 | 1.7e-41 | 32.50 | ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gyp... | [more] |
KAA0055957.1 | 2.9e-41 | 45.76 | uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa] | [more] |
TYK28162.1 | 3.2e-40 | 43.90 | uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa] | [more] |
KAA0043405.1 | 7.9e-39 | 48.54 | hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa] | [more] |
KAA0047672.1 | 3.9e-38 | 44.87 | uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa] >TYK... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BY54 | 8.3e-42 | 32.50 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7UMY2 | 1.4e-41 | 45.76 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5D3DXC7 | 1.6e-40 | 43.90 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5A7TPR5 | 3.8e-39 | 48.54 | RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3C8N8 | 1.9e-38 | 44.87 | Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00125... | [more] |
Match Name | E-value | Identity | Description | |