Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCCAACGTACCCGTAGAGTCGATACGGTCATCTTCCTCTGAATATGATGAGCTGGGTACTGTGCTACAATGGGCAGAGCAGACACAACTAAAACATGGGGACAGTCTGCCTTATAAAAGCCTCGTGTCATCATCTTTCTCAGGTCAAGTTCAAGTCATTTCAAATGAGCTGGGGGAGTTGAAGGCCATCTGGGAAGGTTTAACGCCGGAAAGAAGATTTCTGTTCTCAAAGAGATACGGCCATATTGCACACCTCATGTATATTCCAATTAACCGGTCACCATCCATGCTTTATTAGAATTCTGGGACCCGGCCTACAAGTGTTTCGCATTCCAAGATTTTGACTTGGTTCCGACCATTGAGGAGTACCACACGATGCTGAACATTGAAGAAAAAGGTGGAGACATGATCTATTGTTTCAACCCACAGTTAACTGCGAAGAGAACTTTATCCAAATTTCTAGCTGTACACCTGAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAGGAGTCTATATCTGCAGATTATCTAACAGAACTCGCTCGCAAACACATAAATGAAGAAAAGGGCCTGGTTCTGTTAGCTTTGTGCATCTACGGGATGGTCTTGTATCCCAGAGTTAAAAGATATGTGGATGACAATGTCTTGAAGCTATTCTTCAGCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTCTAGCGGAAACGGTTCGGGCGCTCAATTATTGTAAGTCCAGCAAAGGCGGGAAGTTGAGGTGTTGTGTGCCCTTACTCTATATTTGGGTGCATAGACATTTTAAGTTCCCAGAAGATTTTGGCTGTCCAAAAATCAACTTCAGCAGCACGTGGAATCTAACAAGGAGTACAATTGCAGAATTTGGCACGGCCCCATGGAACTCAAGTTTTCCGAGGAAAGAACCATGGGTGTCCTTCTTTTCGAATTCCAAATTAGAGCATGTGATTTGGAAGACACATTGGATGCCCCTAAGAGCCTTAATCTACAGATGCGGGAGCTTCCACACAGTCCCTCTAGTAGGCCCTTGGGGATGCGTCCATTATGCTCCGTTGTTGGCCTTGCGGCAAAGTTGGTTTAAACAGTTCATACCAGCAACTCATGGTCTGCATAAATTAGAATTTTCCTACAGTTGCTAGGATTCTAACGAAAAGAAGCGACAAGTGCTGACTTCCTGGACAACAGTTAGAAGGATAAATGGCAATAGTCATTCTGAGGGAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGAGAAAGATCCCAATTACGACTCGTGACAATGTGGGAGAATCATCTAATAGAGCAGTAGATAAGCCTAACCAGCTAGCGACAGAGCGAAAAGAGTTAGTGGGAAGAAATCAAACATTGAAGCTAGAAAATGAAAAGTTACAGCAAGAGGTCAAATGTTTGATGAACCAGGTAACTCAAGCTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAATCGAGCCAAGCGAGAAAGAGATTATGATATATTGGACGAGGAGAATAGAAGGTTGATTAAGGAGAATCATGCTCTTAGGAATGAAAATACTGCATTACGAAGAGCAACTCGTTCACAAGAGGACAGGGTCAAAGACCTTTCAAGAGCCAAAGAGACTCTCTTAGAGTTAGTTGCAGAATTAAATGAAATCATCAACAAGCAGAAAACGCAATTTATCGAGTTTGAAGAAGCCAATACTGCTCTAAGGCGAACACTGGACAATCTACGCGTGAACATGCATGCTCAATCAGAAGAGTCTAAAGCTTTTAAAAGTTATTCAAGCTCGTTGGAACGTCAGCTCCAAGCATTTCAAAGGGCAAGCGAACAGTTGTCACTAGAGAGAGGACAACTAGAGGAAAAATACTCCTCATTAAGGGGAGATTATGCCATTATGAGAGAAGACATGCAAATAATTCTTGGGAAAGTAAATCAAACTATGAACACTATCAAGATCATGGCTAGGAGAGCCCGAGGATTTGCAGAATGGGCAAGGGATCTGCGAGAGAATACATCACCTATGGCCTCTAATGCGGAGGAGTTGTTTGAGTTTTTAGGGATGATTCGTAGAGACCTTGGGTACTTTGGTCACTTTCATTAATGTTCCCTGTTCCTTGTTTTCCAATTCCCAATTGTTTACTTTGTAGATATATTCATTTTTTATCCCTCAATAATAAAATTCCATTCATTCATGCATCTCATACTGTTCTTTCTTCTATTCCTTTTTTACTTATTCTAAGACTTTTCTTTTAAAAATAAAAACAGAACAATAAAATAGCTCGTTCAACAAGAGTCTACCACGCTTACAACACTAGGCGTAGAACAAGGATTATGGAAAAGAAAGGTGAACAAGAGAAGACTAAGCGGGACATCGAGGAAATCAGGGAAAAGGTTGATGCAATCATTGCCGCTTTAGAAAAGGGCAACATGATTGCAGATACGACTACACCAGACACTCCAATTGGAAACCCTCAAGCTGGCCTACCATTTCCACCCAGTTTTGCTTCGCATGTTCGTACGACAGCAGAAGCGTCCATGCCACAACATACTACCTATAACCCCTTATATGACATACCTGTTGGGCAATACCCTTTTCCATCCTTTAAAGAGGGCCAAATCCCCCAAATACCCATGGCTAGCCAAGCTGGTGCTTCTTATTTCAAGCCAGAGTTTTCAAAAATACCTTTTGCTGTCCCTAACTTGGATGACCCAGACGTAAAGAAGGAGTTAGCCGCGCCCTCTAATGAAAAACTTGAAGTTTTAGAGGAAGGGTTGAGGGCGGTTGAGGGCACTAGTGTTTTTGGAAACATGGATGCCACTCAATTATGTTTGGTTCCAGATGTTGTGATCCCACTGAAATTCAAACTTCCTGAATTTGAAAAATATGACGGGACGACATGCCCTAAGAGTCACATTGTTATGTACTGTAGGAAGATGGCAGCGCACGTTCATAATTATAAGCTGCTTATACATTGCTTTCAGGACAGCTTGAAAGGTCCAGCCGCCCGTTGGTATATGCAGTTGGATAGTTCACATGTTGTCACATGGAAGAACTTGGCTGATTCTTTCCTCAAACAATACAAGCACAATATTGATTTGGCTCCCGACCGACTGGACTTACAGAGGATGGAAAAGAAGAGTACTAAAGACTTCAAGGATTATGCTCAAAGGTGGCGGGATACGACAGCTCAGGTCCAACCCCCTTTAACAGATAAGGAGCTTTCTGCCATGTTTATCAATACCCTAAGGTCCCCATTCTATGAACATATGGTTGGAAGTGCGTCGACCAATTTCTCCGATATCATGACAATTGGGGAAAGAATTGAGTACGGGATCAAACATGGTAAAATAGCCAAAACCGCTGAATCCTCAAGCACAAAAAAGGGCAACACTTCAAAGAAGAAAGAGGGAGAAGTACAGATGATAGGGAAGGTGGATAAGTCCCATCGACAAATCCTTCGAATTATTTAGCTACATACGGATACTATCCACACCAGGTGAATAATGCTTCAGCGCAGTACTCCCCATTTTATGGCCAAAATACCCGACCCCAAATGAATCAGATTTTCAGTCTCGTAGACAATAACAAACAATCACTCCAGGTCAGCAAAATAATCGAGCACCTTATAAGCAAGCCCAATTTGATCCGATTCCGATGACATATACTGAGCTCTTGCCTCAGTTAATTCAGAACCATCAGTTGGCACCCAAGCCTATTGCTCCACTGCAACCTCCTTATCCAAGATGGTATGACCCTAATGCACGGTGTGATTACCATGCAGGTGCTGTTGGGCATTCTACAGAAAATTGCACTGCTTTGAAGTATAGGGTGCAAGAGCTCATTAAGGCCGGATGGTTAAATTTCAAAAAAGAGGAGGGACCCAATGTTGATAATAATCCTTTACCAAATCATCAGGTGAATGCAATAGATCAATGTCAGGATATTATCAAGAAGATAGATGTTGCAGAGATCATGACTCCTGAGGAGAAGCTTTTTGAGATTCTCCTCGTTAACGGATATGTATCAATAGAGTATGCACACAAGGACCTTGTTCAAGAAGGATTCGATGATAATTTGACTTGCCTATTTCATGCTGGGGCAAAGGGGCATTCTTTGGAACAATGTCGTCATTTTCATAAGAGGGTCCAAGAACTGGTGGACTCAAAATTTCTTATGGTCACCCAAGCCCATCACTAGGAGGAGGAAATAGACGCCGTGGAAGAATTGCTGCCTAAAGAAAGTTTGAATTCATCTTTCAAACTGAAGCCACTCACGATCTATTACCGTGAGAAGACTACTACTATTGATCCAAAGTCGATCACCATTCAGGTGCCGGCTCCTTTCAAGTACAAGAGTTCTAAGGCAGTACCATGGAGTTATGAGTACAAAGTAACTATTAACTCAGAAACGCCACCACTTCCAGTTGACAACATTTCCGGAACGGGAGGTGTAACACGGAGTGGGAAATGCTACACTCCAGATCAGTTATTGAAGTGCTCAAAGAATACAATAGAAGAGAAAAATGAGAAAGTTGAAGGTAATACTGATAGCAATGTCAAGCCTAAAGAAACAACAGTGATGAAGAAATCAAGGGGCAAACAGACTGTGTCCGAACAAGAAACTCAAGAATTTCTAAAGTTGGTTAAGTAGAGTGAATACAAAGTAGTGGAACAGCTAGCTCAGACGCCTGCTAAGATTTCCATATTATCTTTGTTGTTATCCTCTGATTCACATCGAGATACGATATTGGAAGCTTTGAATCTAGCATATGTTTCCAAGGACATCACTTCAGATGGTCTAGATAATATTGTGGGGAATATAACTGCTCACAACACCATAACTTTCACTGATGATGAGATACCGCCCGAAGGCACAGGACACACAAAGGCACTGCATATTTCAGTCAAGTGTAAGAACTTTTTAGTAGCAAAAGTCCTGGTGGATAATGGGTCTTCTTTGAACATAATGCCAAAATCAACGTTGGAAAGATTGCCAGTGGATATGTCCCATATGAGGCCAAGTACCGTAGTAGTAAGGGCCTTCGATGGGGCACGCAGTCAGGTGGTGGGTGACATTGAGATTCCAATACAAATCGGCCCATGCACATTTAACATAACCTTCCAAGTTATGGATATCCCCTCTGCTTACAGTTTCTTATTAGGGCGGCCTTGGATACATTCTGCAGGAGCTGTCCCATCATCGCTGCACCAGAAACTCAAGTTTTCAATTGGAAGGAGCCTAGTAATTGTATCTGGTCAAGAGGATATCTTAGTTTCTAGGCCGGCTTCAATGCCATATATTGATGCAGCAGAGGAAGCTTTTGAGTCATCATTTCAAACATTCGAGGTGGCAAGTGCTATGACTCTATATGGGGAAAGCAAGAAATCTAAATCCCAATCTTCAGTCATGACATTCAAGGAAAGCAACAGTCGTTTAGATGATGTTTTAAGCCTATCAAAAAATACAAAGAGATTTGGGCTTGGGTATAAGCCTGATAAAGCAGATATGATCAGGGTACAGAAGCGAGAAAAAGAGAGGCGTTTGGCCAGATTTGAAAGTCGAGAACCAGAATATGGAGAAAAAAACATCCCTCATCTCTACCATTCGTTTGAAAGTGCTGGTATAATTCGTCCAGGTGATTTTGCAGTTGCAGTAGTGACTAAAGAGGAAAAATTGGGTCCATGGATCTGCCCGTGCCCAGAGTACTATTGA
mRNA sequence
ATGAATGCCAACGTACCCGTAGAGTCGATACGGTCATCTTCCTCTGAATATGATGAGCTGGGTACTGTGCTACAATGGGCAGAGCAGACACAACTAAAACATGGGGACAGTCTGCCTTATAAAAGCCTCGTGTCATCATCTTTCTCAGGTCAAGTTCAAGTCATTTCAAATGAGCTGGGGGAGTTGAAGGCCATCTGGGAAGAATTCTGGGACCCGGCCTACAAGTGTTTCGCATTCCAAGATTTTGACTTGGTTCCGACCATTGAGGAGTACCACACGATGCTGAACATTGAAGAAAAAGGTGGAGACATGATCTATTGTTTCAACCCACAGTTAACTGCGAAGAGAACTTTATCCAAATTTCTAGCTGTACACCTGAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAGGAGTCTATATCTGCAGATTATCTAACAGAACTCGCTCGCAAACACATAAATGAAGAAAAGGGCCTGGTTCTGTTAGCTTTGTGCATCTACGGGATGGTCTTGTATCCCAGAGTTAAAAGATATGTGGATGACAATGTCTTGAAGCTATTCTTCAGCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTCTAGCGGAAACGGTTCGGGCGCTCAATTATTGTAAGTCCAGCAAAGGCGGGAAGTTGAGAATTTGGCACGGCCCCATGGAACTCAAGTTTTCCGAGGAAAGAACCATGGGTGTCCTTCTTTTCGAATTCCAAATTAGAGCATGTGATTTGGAAGACACATTGGATGCCCCTAAGAGCCTTAATCTACAGATGCGGGAGCTTCCACACAGTCCCTCTAGTAGGCCCTTGGGGATGCGTCCATTATGCTCCGTTGTTGGCCTTGCGGCAAAGTTGGATTCTAACGAAAAGAAGCGACAAGTGCTGACTTCCTGGACAACAGTTAGAAGGATAAATGGCAATAGTCATTCTGAGGGAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGAGAAAGATCCCAATTACGACTCGTGACAATGTGGGAGAATCATCTAATAGAGCAGTAGATAAGCCTAACCAGCTAGCGACAGAGCGAAAAGAGTTAGTGGGAAGAAATCAAACATTGAAGCTAGAAAATGAAAAGTTACAGCAAGAGGTCAAATGTTTGATGAACCAGGTAACTCAAGCTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAATCGAGCCAAGCGAGAAAGAGATTATGATATATTGGACGAGGAGAATAGAAGGTTGATTAAGGAGAATCATGCTCTTAGGAATGAAAATACTGCATTACGAAGAGCAACTCGTTCACAAGAGGACAGGGTCAAAGACCTTTCAAGAGCCAAAGAGACTCTCTTAGAGTTAGTTGCAGAATTAAATGAAATCATCAACAAGCAGAAAACGCAATTTATCGAGTTTGAAGAAGCCAATACTGCTCTAAGGCGAACACTGGACAATCTACGCGTGAACATGCATGCTCAATCAGAAGAGTCTAAAGCTTTTAAAAGTTATTCAAGCTCGTTGGAACGTCAGCTCCAAGCATTTCAAAGGGCAAGCGAACAGTTGTCACTAGAGAGAGGACAACTAGAGGAAAAATACTCCTCATTAAGGGGAGATTATGCCATTATGAGAGAAGACATGCAAATAATTCTTGGGAAAGTAAATCAAACTATGAACACTATCAAGATCATGGCTAGGAGAGCCCGAGGATTTGCAGAATGGGCAAGGGATCTGCGAGAGAATACATCACCTATGGCCTCTAATGCGGAGGAGTTGTTTGAGTTTTTAGGGATGATTCGTAGAGACCTTGGGCGTAGAACAAGGATTATGGAAAAGAAAGGTGAACAAGAGAAGACTAAGCGGGACATCGAGGAAATCAGGGAAAAGGTTGATGCAATCATTGCCGCTTTAGAAAAGGGCAACATGATTGCAGATACGACTACACCAGACACTCCAATTGGAAACCCTCAAGCTGGCCTACCATTTCCACCCAAGATCATGACTCCTGAGGAGAAGCTTTTTGAGATTCTCCTCGTTAACGGATATGAGGAGGAAATAGACGCCGTGGAAGAATTGCTGCCTAAAGAAAGTTTGAATTCATCTTTCAAACTGAAGCCACTCACGATCTATTACCGTGAGAAGACTACTACTATTGATCCAAAGTCGATCACCATTCAGGTGCCGGCTCCTTTCAAGTACAAGAGTTCTAAGGCAGTACCATGGAGTTATGAGTACAAAGTAACTATTAACTCAGAAACGCCACCACTTCCAGTTGACAACATTTCCGGAACGGGAGGTGTAACACGGAGTGGGAAATGCTACACTCCAGATCAGTTATTGAACCTATCAAAAAATACAAAGAGATTTGGGCTTGGGTATAAGCCTGATAAAGCAGATATGATCAGGGTACAGAAGCGAGAAAAAGAGAGGCGTTTGGCCAGATTTGAAAGTCGAGAACCAGAATATGGAGAAAAAAACATCCCTCATCTCTACCATTCGTTTGAAAGTGCTGGTATAATTCGTCCAGGTGATTTTGCAGTTGCAGTAGTGACTAAAGAGGAAAAATTGGGTCCATGGATCTGCCCGTGCCCAGAGTACTATTGA
Coding sequence (CDS)
ATGAATGCCAACGTACCCGTAGAGTCGATACGGTCATCTTCCTCTGAATATGATGAGCTGGGTACTGTGCTACAATGGGCAGAGCAGACACAACTAAAACATGGGGACAGTCTGCCTTATAAAAGCCTCGTGTCATCATCTTTCTCAGGTCAAGTTCAAGTCATTTCAAATGAGCTGGGGGAGTTGAAGGCCATCTGGGAAGAATTCTGGGACCCGGCCTACAAGTGTTTCGCATTCCAAGATTTTGACTTGGTTCCGACCATTGAGGAGTACCACACGATGCTGAACATTGAAGAAAAAGGTGGAGACATGATCTATTGTTTCAACCCACAGTTAACTGCGAAGAGAACTTTATCCAAATTTCTAGCTGTACACCTGAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAGGAGTCTATATCTGCAGATTATCTAACAGAACTCGCTCGCAAACACATAAATGAAGAAAAGGGCCTGGTTCTGTTAGCTTTGTGCATCTACGGGATGGTCTTGTATCCCAGAGTTAAAAGATATGTGGATGACAATGTCTTGAAGCTATTCTTCAGCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTCTAGCGGAAACGGTTCGGGCGCTCAATTATTGTAAGTCCAGCAAAGGCGGGAAGTTGAGAATTTGGCACGGCCCCATGGAACTCAAGTTTTCCGAGGAAAGAACCATGGGTGTCCTTCTTTTCGAATTCCAAATTAGAGCATGTGATTTGGAAGACACATTGGATGCCCCTAAGAGCCTTAATCTACAGATGCGGGAGCTTCCACACAGTCCCTCTAGTAGGCCCTTGGGGATGCGTCCATTATGCTCCGTTGTTGGCCTTGCGGCAAAGTTGGATTCTAACGAAAAGAAGCGACAAGTGCTGACTTCCTGGACAACAGTTAGAAGGATAAATGGCAATAGTCATTCTGAGGGAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGAGAAAGATCCCAATTACGACTCGTGACAATGTGGGAGAATCATCTAATAGAGCAGTAGATAAGCCTAACCAGCTAGCGACAGAGCGAAAAGAGTTAGTGGGAAGAAATCAAACATTGAAGCTAGAAAATGAAAAGTTACAGCAAGAGGTCAAATGTTTGATGAACCAGGTAACTCAAGCTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAATCGAGCCAAGCGAGAAAGAGATTATGATATATTGGACGAGGAGAATAGAAGGTTGATTAAGGAGAATCATGCTCTTAGGAATGAAAATACTGCATTACGAAGAGCAACTCGTTCACAAGAGGACAGGGTCAAAGACCTTTCAAGAGCCAAAGAGACTCTCTTAGAGTTAGTTGCAGAATTAAATGAAATCATCAACAAGCAGAAAACGCAATTTATCGAGTTTGAAGAAGCCAATACTGCTCTAAGGCGAACACTGGACAATCTACGCGTGAACATGCATGCTCAATCAGAAGAGTCTAAAGCTTTTAAAAGTTATTCAAGCTCGTTGGAACGTCAGCTCCAAGCATTTCAAAGGGCAAGCGAACAGTTGTCACTAGAGAGAGGACAACTAGAGGAAAAATACTCCTCATTAAGGGGAGATTATGCCATTATGAGAGAAGACATGCAAATAATTCTTGGGAAAGTAAATCAAACTATGAACACTATCAAGATCATGGCTAGGAGAGCCCGAGGATTTGCAGAATGGGCAAGGGATCTGCGAGAGAATACATCACCTATGGCCTCTAATGCGGAGGAGTTGTTTGAGTTTTTAGGGATGATTCGTAGAGACCTTGGGCGTAGAACAAGGATTATGGAAAAGAAAGGTGAACAAGAGAAGACTAAGCGGGACATCGAGGAAATCAGGGAAAAGGTTGATGCAATCATTGCCGCTTTAGAAAAGGGCAACATGATTGCAGATACGACTACACCAGACACTCCAATTGGAAACCCTCAAGCTGGCCTACCATTTCCACCCAAGATCATGACTCCTGAGGAGAAGCTTTTTGAGATTCTCCTCGTTAACGGATATGAGGAGGAAATAGACGCCGTGGAAGAATTGCTGCCTAAAGAAAGTTTGAATTCATCTTTCAAACTGAAGCCACTCACGATCTATTACCGTGAGAAGACTACTACTATTGATCCAAAGTCGATCACCATTCAGGTGCCGGCTCCTTTCAAGTACAAGAGTTCTAAGGCAGTACCATGGAGTTATGAGTACAAAGTAACTATTAACTCAGAAACGCCACCACTTCCAGTTGACAACATTTCCGGAACGGGAGGTGTAACACGGAGTGGGAAATGCTACACTCCAGATCAGTTATTGAACCTATCAAAAAATACAAAGAGATTTGGGCTTGGGTATAAGCCTGATAAAGCAGATATGATCAGGGTACAGAAGCGAGAAAAAGAGAGGCGTTTGGCCAGATTTGAAAGTCGAGAACCAGAATATGGAGAAAAAAACATCCCTCATCTCTACCATTCGTTTGAAAGTGCTGGTATAATTCGTCCAGGTGATTTTGCAGTTGCAGTAGTGACTAAAGAGGAAAAATTGGGTCCATGGATCTGCCCGTGCCCAGAGTACTATTGA
Protein sequence
MNANVPVESIRSSSSEYDELGTVLQWAEQTQLKHGDSLPYKSLVSSSFSGQVQVISNELGELKAIWEEFWDPAYKCFAFQDFDLVPTIEEYHTMLNIEEKGGDMIYCFNPQLTAKRTLSKFLAVHLKEVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKRYVDDNVLKLFFSIEQGVDPAIPLLAETVRALNYCKSSKGGKLRIWHGPMELKFSEERTMGVLLFEFQIRACDLEDTLDAPKSLNLQMRELPHSPSSRPLGMRPLCSVVGLAAKLDSNEKKRQVLTSWTTVRRINGNSHSEGVTPEYLQWRIKRRKIPITTRDNVGESSNRAVDKPNQLATERKELVGRNQTLKLENEKLQQEVKCLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKENHALRNENTALRRATRSQEDRVKDLSRAKETLLELVAELNEIINKQKTQFIEFEEANTALRRTLDNLRVNMHAQSEESKAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGMIRRDLGRRTRIMEKKGEQEKTKRDIEEIREKVDAIIAALEKGNMIADTTTPDTPIGNPQAGLPFPPKIMTPEEKLFEILLVNGYEEEIDAVEELLPKESLNSSFKLKPLTIYYREKTTTIDPKSITIQVPAPFKYKSSKAVPWSYEYKVTINSETPPLPVDNISGTGGVTRSGKCYTPDQLLNLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREPEYGEKNIPHLYHSFESAGIIRPGDFAVAVVTKEEKLGPWICPCPEYY
Homology
BLAST of Spg028099 vs. NCBI nr
Match:
KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 316.2 bits (809), Expect = 8.6e-82
Identity = 230/666 (34.53%), Postives = 337/666 (50.60%), Query Frame = 0
Query: 12 SSSSEYDELGTVLQWAEQTQLKHGDSL-PYKSLVSSSFSG---QVQVISNELGELKAIWE 71
S S++DE VL+WAE+ Q K GD+L P + + S G ++ I L+AI
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGDALTPQRRFMFSKKYGHIAELMYIPVNYFALRAI-I 68
Query: 72 EFWDPAYKCFAFQDFDLVPTIEEYHTMLNIEEKGGDMIYCFNPQLTAKRTLSKFL-AVHL 131
F DPAY CF F +L+PTIEEY ML++ EK +++Y FNP+ T KRTLSKFL VH
Sbjct: 69 NFGDPAYGCFTFGSCNLLPTIEEYQAMLSMPEKEREIVYFFNPKQTTKRTLSKFLETVHA 128
Query: 132 KEVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKRYVDDNVL 191
E+QK +KVKG EE++ DYL ++ + +I+E+KGL LLALCIYG V++P+ + YVD V+
Sbjct: 129 TEIQKYIKVKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVI 188
Query: 192 KLFFSIEQGVDPAIPLLAETVRALNYCKSSKGGKLR-------IW-HG----PME----- 251
KLFF +E+GV+P IP+LAET R+LNYC++ GKL IW H P E
Sbjct: 189 KLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVPLLYIWIHSHIKFPAEFRCPR 248
Query: 252 LKFSEE-RTMGVLLFEFQIRACD-----------------LEDTLDAP-----KSLNLQM 311
L FS M + EF + D E+ + K++ +
Sbjct: 249 LDFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRC 308
Query: 312 RELPHSPSSRPLG---MRPLCSVVGLAAKL------------------DSNEKKRQVLTS 371
+ P P G PL + + K D KKRQ + +
Sbjct: 309 GDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCA 368
Query: 372 WTTVRRINGNSHSEGVTPEYLQWRIKRRK-IPITTRDNVGESSNRAVDKPNQLATERKEL 431
W ++R+I H EGVT Y W+ RRK I +R+ V + ++PNQ + EL
Sbjct: 369 WKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVESGKETSFEQPNQWIEKSIEL 428
Query: 432 VGRNQTLKLENEKLQQEVKCLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLI 491
+N+ L+ ENEKL++E M+ T +LE+ + KN+ K E+D + LDEE RR+
Sbjct: 429 EEKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDEEMRRMN 488
Query: 492 KENHALRNENTALRRATRSQEDRVKDLSRAKETLLELVAELNEIINKQKTQFIEFEEANT 551
K N +L+NE T L+
Sbjct: 489 KANRSLKNEKTTLQATV------------------------------------------- 548
Query: 552 ALRRTLDNLRVNMHAQSEESKAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRG 611
L + M +SEE + K+Y+ SL QL A Q +S++++ E L Y ++
Sbjct: 549 -------GLHLKMAERSEEYEILKNYADSLHYQLTALQNSSKRITQEYESLNTDYVQMKV 608
BLAST of Spg028099 vs. NCBI nr
Match:
KAA0036949.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 309.7 bits (792), Expect = 8.1e-80
Identity = 206/589 (34.97%), Postives = 317/589 (53.82%), Query Frame = 0
Query: 69 FWDPAYKCFAFQDFDLVPTIEEYHTMLNIEEKGGDMIYCFNPQLTAKRTLSKFL-AVHLK 128
F DPAY CF F DL+PTIEEY ML++ +K +++Y FNP+ T KRTLSKFL VH
Sbjct: 40 FGDPAYGCFTFGSCDLLPTIEEYQAMLSMPQKEREIVYFFNPKQTTKRTLSKFLETVHAT 99
Query: 129 EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKRYVDDNVLK 188
E+QK +K KG EE++ DYL ++ + +I+E+KGL LLALCIYG V++P+ + YVD V+K
Sbjct: 100 EIQKYIKAKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIK 159
Query: 189 LFFSIEQGVDPAIPLLAETVRALNYCKSSKGGKLRIWHGPMELKFSEERTMGVLLFEFQI 248
LFF +E+GV+P IP+LAET R+LNYC++ GKL G L +
Sbjct: 160 LFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCC------------VRGKLNCCVPL 219
Query: 249 RACDLEDTLDAPKSLNLQMRELPHSPSSRPLG-MRPLCSVVGLAAKLDSNEKKRQVLT-- 308
+ + P P S P MR S G+A + +K L+
Sbjct: 220 LYIWIHSHIKFPAEF-----RCPRLDFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFF 279
Query: 309 ------------SWTTVRRI---NGNSHS---------EGVTPEYLQWRI-KRRKIPIT- 368
W ++ + G+ H+ TP + ++ ++ IP T
Sbjct: 280 AKLTSENVIWKAQWMPLKAVIYRCGDFHNVPLLGPWGGVNCTPLLVLRQVWLKQFIPPTH 339
Query: 369 -----------------TRDNVGESSNRAVDKPNQLATERKELVGRNQTLKLENEKLQQE 428
++ + ++PNQ + EL +N+ L+ ENEKL++E
Sbjct: 340 NLQESDFSYDPEDCQGKKTSSIERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKE 399
Query: 429 VKCLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKENHALRNENTALRRAT 488
M+ T KLE+ + KN+ K E+D + LD+E RR+ K N +L+NE T +
Sbjct: 400 TSQWMDHATYLQNKLEKTKSFLKNQDKLEKDLETLDKEMRRMNKANRSLKNEKTTFQATM 459
Query: 489 RSQEDRVKDLSRAKETLLELVAELNEIINKQKTQFIEFEEANTALRRTLDNLRVNMHAQS 548
SQ++ +KDL KE L+LV +LN I K++T+ ++ E N +LR+T+D+L + M S
Sbjct: 460 GSQDEYIKDLENGKEYFLKLVNDLNTSIRKRETKIMDLEAQNHSLRQTVDSLHLKMVEHS 519
Query: 549 EESKAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMREDMQIILGKVN 608
EE + K+Y+ SL QL A Q +S++++ E L Y ++ DY + D Q+++ +V+
Sbjct: 520 EEYEILKNYADSLHYQLTALQNSSKRITQEYESLNTDYVQMKVDYDMQTRDFQVLVERVD 579
Query: 609 QTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGMIRRDLG 611
QT+ ++++++RA FAE A DLR N M +A++L FL MI R+LG
Sbjct: 580 QTIEFLRMVSKRANDFAESAADLRVNFFSMQPHADDLNRFLKMICRELG 611
BLAST of Spg028099 vs. NCBI nr
Match:
KAA0066094.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 271.2 bits (692), Expect = 3.2e-68
Identity = 185/533 (34.71%), Postives = 268/533 (50.28%), Query Frame = 0
Query: 12 SSSSEYDELGTVLQWAEQTQLKHGDSLPYKSLVSSSFSGQVQVISNELGELKAIWE---- 71
S S++DE VL+WAE+ Q K GD + S +S Q+ N+L LK IWE
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGDGINNSSQISVLSRCQLSFTQNDLANLKMIWEALTP 68
Query: 72 ------------------------------EFWDPAYKCFAFQDFDLVPTIEEYHTMLNI 131
FWDPAY CF F DL+PTIEEY ML++
Sbjct: 69 QRRFMFSKKYGHIAELMYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSM 128
Query: 132 EEKGGDMIYCFNPQLTAKRTLSKFL-AVHLKEVQKNVKVKGVEESISADYLTELARKHIN 191
K +++Y FNP+ T KRTLSKFL VH ++QK +KVKG EE++ DYL ++ + +++
Sbjct: 129 PGKEREIVYFFNPKKTTKRTLSKFLETVHAAKIQKYIKVKGGEENVPFDYLIKMTQTYVD 188
Query: 192 EEKGLVLLALCIYGMVLYPRVKRYVDDNVLKLFFSIEQGVDPAIPLLAETVRALNYCKSS 251
E+KGL LLALCIYG V++P+ + YVD + G ++PLL +NY
Sbjct: 189 EDKGLTLLALCIYGAVIFPKAEGYVDGKAV----IYRCGDFHSVPLLGPW-GGVNYT--- 248
Query: 252 KGGKLRIWHGPMELKFSEERTMGVLLFEFQIRACDLEDTLDAPKSLNLQMRELPHSPSSR 311
L + H V L +F P + NLQ + + P
Sbjct: 249 ---PLLVLH-------------QVWLKQF------------IPPTHNLQEFDFSYDPE-- 308
Query: 312 PLGMRPLCSVVGLAAKLDSNEKKRQVLTSWTTVRRINGNSHSEGVTPEYLQWRIKRRK-I 371
D KKRQ + +W ++R+I H EGVT Y W+ RRK I
Sbjct: 309 -----------------DCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNI 368
Query: 372 PITTRDNVGESSNRAVDKPNQLATERKELVGRNQTLKLENEKLQQEVKCLMNQVTQASGK 431
+R+ V + ++PNQ + EL +N+ L+ ENEKL++E M+ T +
Sbjct: 369 IDISREVVERGKKTSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDHATYLQNE 428
Query: 432 LEEVERVSKNRAKRERDYDILDEENRRLIKENHALRNENTALRRATRSQEDRVKDLSRAK 491
LE+ + KN+ K E+D + LD+E RR+ K N +L+NE T L+ SQ++ +KDL K
Sbjct: 429 LEKTKSFLKNQDKLEKDLETLDKEMRRMNKANRSLKNEKTTLQATMGSQDEYIKDLENGK 486
Query: 492 ETLLELVAELNEIINKQKTQFIEFEEANTALRRTLDNLRVNMHAQSEESKAFK 509
E LE V +LN I K++TQ ++ E N +LR+T+D+L + M SEE + K
Sbjct: 489 EYFLERVNDLNTSIGKRETQIMDLEAQNHSLRQTVDSLHLKMAECSEEYEILK 486
BLAST of Spg028099 vs. NCBI nr
Match:
KAA0036933.1 (uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 264.2 bits (674), Expect = 3.9e-66
Identity = 220/688 (31.98%), Postives = 326/688 (47.38%), Query Frame = 0
Query: 69 FWDPAYKCFAFQDFDLVPTIEEYHTMLNIEEKGGDMIYCFNPQLTAKRTLSKFL-AVHLK 128
F DPAY CF F DL+PTIEEY ML++ +K +++Y FNP+ T KRTLSKFL VH
Sbjct: 40 FGDPAYGCFTFGSCDLLPTIEEYQAMLSMPQKEREIVYFFNPKQTTKRTLSKFLETVHAT 99
Query: 129 EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKRYVDDNVLK 188
E+QK +K KG EE++ DYL ++ + +I+E+KGL LLALCIYG V++P+ + YVD V+K
Sbjct: 100 EIQKYIKAKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIK 159
Query: 189 LFFSIEQGVDPAIPLLAETVRALNYCKSSKGGKLR---------------IW-HG----P 248
LFF +E+GV+P IP+LAET R+LNYC++ GKL IW H P
Sbjct: 160 LFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVRGKLNCCVPLLYIWIHSHIKFP 219
Query: 249 ME-----LKFSEE-RTMGVLLFEFQIRACDLEDTLDAPKSLNLQMRELPHSPSSRPLGMR 308
E L FS M + EF + D T ++ +L
Sbjct: 220 AEFRCPRLDFSSPWNLMRNTISEFGMAVWD--PTYPRKEAWLSFFAKLTSENVIWKAQWM 279
Query: 309 PLCSVVGLAAKLDS----------NEKKRQVLTS-W-------TTVRRINGNSHSEGVTP 368
PL +V+ S N VL W T +I H EGVT
Sbjct: 280 PLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLKIKDKGHYEGVTS 339
Query: 369 EYLQWRIKRRK-IPITTRDNVGESSNRAVDKPNQLATERKELVGRNQTLKLENEKLQQEV 428
Y W+ RRK I +R+ V + ++PNQ + EL +N+ L+ ENEKL++E
Sbjct: 340 GYEAWQANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEQKNRLLEQENEKLRKET 399
Query: 429 KCLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKENHALRNENTALRRATR 488
M+ T +LE+ + KN+ K E D + LD+E RR+ K N +++NE T L+
Sbjct: 400 SQWMDHATYLQNELEKTKSFLKNQDKLETDLETLDKEMRRMNKANRSMKNEKTTLQATV- 459
Query: 489 SQEDRVKDLSRAKETLLELVAELNEIINKQKTQFIEFEEANTALRRTLDNLRVNMHAQSE 548
L + M +SE
Sbjct: 460 -------------------------------------------------GLHLKMAERSE 519
Query: 549 ESKAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMREDMQIILGKVNQ 608
E K K+Y+ L QL A Q +S++++ E L Y ++ DY + D Q+++ +V+Q
Sbjct: 520 EYKILKNYADFLHYQLTALQNSSKRITQEYESLNTDYVQMKVDYDLHTRDFQVLVERVDQ 579
Query: 609 TMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGMIRRDLGRR--TRIMEKKG 668
T+ ++++++RA GFAEWA T IR R ++IME+K
Sbjct: 580 TIEFLRMVSKRANGFAEWAGKYSSFTP---------------IRHPYNTRYKSQIMEEKD 639
Query: 669 -EQEKTKRDIEEIREKVDAIIAALE--KGNMIADTTTPDTPIGNPQAGLPFPP-----KI 700
+ +K +++I + E+V I+ L KG DTT PI + + +PP I
Sbjct: 640 KDMDKMRQEINNLGEQVSKILELLSMGKGKAAVDTTQSSNPIQDTDDPI-YPPGFTPYHI 659
BLAST of Spg028099 vs. NCBI nr
Match:
KAA0036933.1 (uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 63.2 bits (152), Expect = 1.3e-05
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 0
Query: 767 ISGTGGVTRSGKCYTPDQLLNLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREP 826
I G GG + + T LL + N RFGLGYKP D IR+Q+++K++RL + E RE
Sbjct: 1372 IMGGGGYSLNKNLET---LLKIPSNDGRFGLGYKPSIYDKIRLQEKKKKKRLVKLEMREF 1431
Query: 827 EYGEKNIPHLYHSFESAGIIRPGD 851
+ K IP LY +F+SAGI D
Sbjct: 1432 DPSIKLIPELYDTFKSAGISYSSD 1452
HSP 2 Score: 224.2 bits (570), Expect = 4.5e-54
Identity = 168/498 (33.73%), Postives = 234/498 (46.99%), Query Frame = 0
Query: 12 SSSSEYDELGTVLQWAEQTQLKHGDSLPYKSLVSSSFSGQVQVISNELGELKAIWE---- 71
S S++DE VL+WAE+ Q K GD + S +S Q+ N+L LK IWE
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGDDINNSSQISVLSRCQLSFTQNDLANLKMIWEALTP 68
Query: 72 ------------------------------EFWDPAYKCFAFQDFDLVPTIEEYHTMLNI 131
FWDPAY CF F DL+PTIEEY ML++
Sbjct: 69 QRRFMFSKKYGHIVELMYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSM 128
Query: 132 EEKGGDMIYCFNPQLTAKRTLSKFL-AVHLKEVQKNVKVKGVEESISADYLTELARKHIN 191
EK +++Y FNP+ T KRTLSKFL VH E+QK +K+KG EE++ DYL ++ + +++
Sbjct: 129 PEKEREIVYFFNPKQTTKRTLSKFLETVHAAEIQKYIKIKGGEENVPFDYLIKMTQTYVD 188
Query: 192 EEKGLVLLALCIYGMVLYPRVKRYVDDNVLKLFFSIEQGVDPAIPLLAETVRALNYCKSS 251
E+KGL LLALCIYG V++P+ + YVD V+KLFF +E+GV+P IP+LAET R+LNYC++
Sbjct: 189 EDKGLTLLALCIYGAVIFPKAEGYVDGKVIKLFFEMERGVNPIIPILAETFRSLNYCRNK 248
Query: 252 KGGKLR-------IW-HGPMELKFSEERTMGVLLF------------EFQIRACD----- 311
GKL IW H +KF E L F EF + D
Sbjct: 249 GEGKLNCCLPLLYIWIHS--HIKFPAEFRCPRLDFSSPWNLIRNTISEFGMAVWDPTYPR 308
Query: 312 LEDTLD-----------------APKSLNLQMRELPHSPSSRPLG---MRPLCSVVGLAA 371
E L K++ + R+ P P G PL + +
Sbjct: 309 KEAWLSFFAKLTSKNVVWKAQWMPLKAVIYRCRDFHSMPLLGPRGGVNYTPLLVLRQVWL 368
Query: 372 KL------------------DSNEKKRQVLTSWTTVRRINGNSHSEGVTPEYLQWRIKRR 410
K D KKRQ + +W ++R+I H EGV Y W+ RR
Sbjct: 369 KQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVISGYEAWQANRR 428
BLAST of Spg028099 vs. ExPASy TrEMBL
Match:
A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)
HSP 1 Score: 316.2 bits (809), Expect = 4.2e-82
Identity = 230/666 (34.53%), Postives = 337/666 (50.60%), Query Frame = 0
Query: 12 SSSSEYDELGTVLQWAEQTQLKHGDSL-PYKSLVSSSFSG---QVQVISNELGELKAIWE 71
S S++DE VL+WAE+ Q K GD+L P + + S G ++ I L+AI
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGDALTPQRRFMFSKKYGHIAELMYIPVNYFALRAI-I 68
Query: 72 EFWDPAYKCFAFQDFDLVPTIEEYHTMLNIEEKGGDMIYCFNPQLTAKRTLSKFL-AVHL 131
F DPAY CF F +L+PTIEEY ML++ EK +++Y FNP+ T KRTLSKFL VH
Sbjct: 69 NFGDPAYGCFTFGSCNLLPTIEEYQAMLSMPEKEREIVYFFNPKQTTKRTLSKFLETVHA 128
Query: 132 KEVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKRYVDDNVL 191
E+QK +KVKG EE++ DYL ++ + +I+E+KGL LLALCIYG V++P+ + YVD V+
Sbjct: 129 TEIQKYIKVKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVI 188
Query: 192 KLFFSIEQGVDPAIPLLAETVRALNYCKSSKGGKLR-------IW-HG----PME----- 251
KLFF +E+GV+P IP+LAET R+LNYC++ GKL IW H P E
Sbjct: 189 KLFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVPLLYIWIHSHIKFPAEFRCPR 248
Query: 252 LKFSEE-RTMGVLLFEFQIRACD-----------------LEDTLDAP-----KSLNLQM 311
L FS M + EF + D E+ + K++ +
Sbjct: 249 LDFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRC 308
Query: 312 RELPHSPSSRPLG---MRPLCSVVGLAAKL------------------DSNEKKRQVLTS 371
+ P P G PL + + K D KKRQ + +
Sbjct: 309 GDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCA 368
Query: 372 WTTVRRINGNSHSEGVTPEYLQWRIKRRK-IPITTRDNVGESSNRAVDKPNQLATERKEL 431
W ++R+I H EGVT Y W+ RRK I +R+ V + ++PNQ + EL
Sbjct: 369 WKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVESGKETSFEQPNQWIEKSIEL 428
Query: 432 VGRNQTLKLENEKLQQEVKCLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLI 491
+N+ L+ ENEKL++E M+ T +LE+ + KN+ K E+D + LDEE RR+
Sbjct: 429 EEKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDEEMRRMN 488
Query: 492 KENHALRNENTALRRATRSQEDRVKDLSRAKETLLELVAELNEIINKQKTQFIEFEEANT 551
K N +L+NE T L+
Sbjct: 489 KANRSLKNEKTTLQATV------------------------------------------- 548
Query: 552 ALRRTLDNLRVNMHAQSEESKAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRG 611
L + M +SEE + K+Y+ SL QL A Q +S++++ E L Y ++
Sbjct: 549 -------GLHLKMAERSEEYEILKNYADSLHYQLTALQNSSKRITQEYESLNTDYVQMKV 608
BLAST of Spg028099 vs. ExPASy TrEMBL
Match:
A0A5A7T6E2 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=4 SV=1)
HSP 1 Score: 309.7 bits (792), Expect = 3.9e-80
Identity = 206/589 (34.97%), Postives = 317/589 (53.82%), Query Frame = 0
Query: 69 FWDPAYKCFAFQDFDLVPTIEEYHTMLNIEEKGGDMIYCFNPQLTAKRTLSKFL-AVHLK 128
F DPAY CF F DL+PTIEEY ML++ +K +++Y FNP+ T KRTLSKFL VH
Sbjct: 40 FGDPAYGCFTFGSCDLLPTIEEYQAMLSMPQKEREIVYFFNPKQTTKRTLSKFLETVHAT 99
Query: 129 EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKRYVDDNVLK 188
E+QK +K KG EE++ DYL ++ + +I+E+KGL LLALCIYG V++P+ + YVD V+K
Sbjct: 100 EIQKYIKAKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIK 159
Query: 189 LFFSIEQGVDPAIPLLAETVRALNYCKSSKGGKLRIWHGPMELKFSEERTMGVLLFEFQI 248
LFF +E+GV+P IP+LAET R+LNYC++ GKL G L +
Sbjct: 160 LFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCC------------VRGKLNCCVPL 219
Query: 249 RACDLEDTLDAPKSLNLQMRELPHSPSSRPLG-MRPLCSVVGLAAKLDSNEKKRQVLT-- 308
+ + P P S P MR S G+A + +K L+
Sbjct: 220 LYIWIHSHIKFPAEF-----RCPRLDFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFF 279
Query: 309 ------------SWTTVRRI---NGNSHS---------EGVTPEYLQWRI-KRRKIPIT- 368
W ++ + G+ H+ TP + ++ ++ IP T
Sbjct: 280 AKLTSENVIWKAQWMPLKAVIYRCGDFHNVPLLGPWGGVNCTPLLVLRQVWLKQFIPPTH 339
Query: 369 -----------------TRDNVGESSNRAVDKPNQLATERKELVGRNQTLKLENEKLQQE 428
++ + ++PNQ + EL +N+ L+ ENEKL++E
Sbjct: 340 NLQESDFSYDPEDCQGKKTSSIERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKE 399
Query: 429 VKCLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKENHALRNENTALRRAT 488
M+ T KLE+ + KN+ K E+D + LD+E RR+ K N +L+NE T +
Sbjct: 400 TSQWMDHATYLQNKLEKTKSFLKNQDKLEKDLETLDKEMRRMNKANRSLKNEKTTFQATM 459
Query: 489 RSQEDRVKDLSRAKETLLELVAELNEIINKQKTQFIEFEEANTALRRTLDNLRVNMHAQS 548
SQ++ +KDL KE L+LV +LN I K++T+ ++ E N +LR+T+D+L + M S
Sbjct: 460 GSQDEYIKDLENGKEYFLKLVNDLNTSIRKRETKIMDLEAQNHSLRQTVDSLHLKMVEHS 519
Query: 549 EESKAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMREDMQIILGKVN 608
EE + K+Y+ SL QL A Q +S++++ E L Y ++ DY + D Q+++ +V+
Sbjct: 520 EEYEILKNYADSLHYQLTALQNSSKRITQEYESLNTDYVQMKVDYDMQTRDFQVLVERVD 579
Query: 609 QTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGMIRRDLG 611
QT+ ++++++RA FAE A DLR N M +A++L FL MI R+LG
Sbjct: 580 QTIEFLRMVSKRANDFAESAADLRVNFFSMQPHADDLNRFLKMICRELG 611
BLAST of Spg028099 vs. ExPASy TrEMBL
Match:
A0A5A7VFL0 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00850 PE=4 SV=1)
HSP 1 Score: 271.2 bits (692), Expect = 1.5e-68
Identity = 185/533 (34.71%), Postives = 268/533 (50.28%), Query Frame = 0
Query: 12 SSSSEYDELGTVLQWAEQTQLKHGDSLPYKSLVSSSFSGQVQVISNELGELKAIWE---- 71
S S++DE VL+WAE+ Q K GD + S +S Q+ N+L LK IWE
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGDGINNSSQISVLSRCQLSFTQNDLANLKMIWEALTP 68
Query: 72 ------------------------------EFWDPAYKCFAFQDFDLVPTIEEYHTMLNI 131
FWDPAY CF F DL+PTIEEY ML++
Sbjct: 69 QRRFMFSKKYGHIAELMYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSM 128
Query: 132 EEKGGDMIYCFNPQLTAKRTLSKFL-AVHLKEVQKNVKVKGVEESISADYLTELARKHIN 191
K +++Y FNP+ T KRTLSKFL VH ++QK +KVKG EE++ DYL ++ + +++
Sbjct: 129 PGKEREIVYFFNPKKTTKRTLSKFLETVHAAKIQKYIKVKGGEENVPFDYLIKMTQTYVD 188
Query: 192 EEKGLVLLALCIYGMVLYPRVKRYVDDNVLKLFFSIEQGVDPAIPLLAETVRALNYCKSS 251
E+KGL LLALCIYG V++P+ + YVD + G ++PLL +NY
Sbjct: 189 EDKGLTLLALCIYGAVIFPKAEGYVDGKAV----IYRCGDFHSVPLLGPW-GGVNYT--- 248
Query: 252 KGGKLRIWHGPMELKFSEERTMGVLLFEFQIRACDLEDTLDAPKSLNLQMRELPHSPSSR 311
L + H V L +F P + NLQ + + P
Sbjct: 249 ---PLLVLH-------------QVWLKQF------------IPPTHNLQEFDFSYDPE-- 308
Query: 312 PLGMRPLCSVVGLAAKLDSNEKKRQVLTSWTTVRRINGNSHSEGVTPEYLQWRIKRRK-I 371
D KKRQ + +W ++R+I H EGVT Y W+ RRK I
Sbjct: 309 -----------------DCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNI 368
Query: 372 PITTRDNVGESSNRAVDKPNQLATERKELVGRNQTLKLENEKLQQEVKCLMNQVTQASGK 431
+R+ V + ++PNQ + EL +N+ L+ ENEKL++E M+ T +
Sbjct: 369 IDISREVVERGKKTSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDHATYLQNE 428
Query: 432 LEEVERVSKNRAKRERDYDILDEENRRLIKENHALRNENTALRRATRSQEDRVKDLSRAK 491
LE+ + KN+ K E+D + LD+E RR+ K N +L+NE T L+ SQ++ +KDL K
Sbjct: 429 LEKTKSFLKNQDKLEKDLETLDKEMRRMNKANRSLKNEKTTLQATMGSQDEYIKDLENGK 486
Query: 492 ETLLELVAELNEIINKQKTQFIEFEEANTALRRTLDNLRVNMHAQSEESKAFK 509
E LE V +LN I K++TQ ++ E N +LR+T+D+L + M SEE + K
Sbjct: 489 EYFLERVNDLNTSIGKRETQIMDLEAQNHSLRQTVDSLHLKMAECSEEYEILK 486
BLAST of Spg028099 vs. ExPASy TrEMBL
Match:
A0A5A7T1W2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00060 PE=4 SV=1)
HSP 1 Score: 264.2 bits (674), Expect = 1.9e-66
Identity = 220/688 (31.98%), Postives = 326/688 (47.38%), Query Frame = 0
Query: 69 FWDPAYKCFAFQDFDLVPTIEEYHTMLNIEEKGGDMIYCFNPQLTAKRTLSKFL-AVHLK 128
F DPAY CF F DL+PTIEEY ML++ +K +++Y FNP+ T KRTLSKFL VH
Sbjct: 40 FGDPAYGCFTFGSCDLLPTIEEYQAMLSMPQKEREIVYFFNPKQTTKRTLSKFLETVHAT 99
Query: 129 EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKRYVDDNVLK 188
E+QK +K KG EE++ DYL ++ + +I+E+KGL LLALCIYG V++P+ + YVD V+K
Sbjct: 100 EIQKYIKAKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIK 159
Query: 189 LFFSIEQGVDPAIPLLAETVRALNYCKSSKGGKLR---------------IW-HG----P 248
LFF +E+GV+P IP+LAET R+LNYC++ GKL IW H P
Sbjct: 160 LFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVRGKLNCCVPLLYIWIHSHIKFP 219
Query: 249 ME-----LKFSEE-RTMGVLLFEFQIRACDLEDTLDAPKSLNLQMRELPHSPSSRPLGMR 308
E L FS M + EF + D T ++ +L
Sbjct: 220 AEFRCPRLDFSSPWNLMRNTISEFGMAVWD--PTYPRKEAWLSFFAKLTSENVIWKAQWM 279
Query: 309 PLCSVVGLAAKLDS----------NEKKRQVLTS-W-------TTVRRINGNSHSEGVTP 368
PL +V+ S N VL W T +I H EGVT
Sbjct: 280 PLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLKIKDKGHYEGVTS 339
Query: 369 EYLQWRIKRRK-IPITTRDNVGESSNRAVDKPNQLATERKELVGRNQTLKLENEKLQQEV 428
Y W+ RRK I +R+ V + ++PNQ + EL +N+ L+ ENEKL++E
Sbjct: 340 GYEAWQANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEQKNRLLEQENEKLRKET 399
Query: 429 KCLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKENHALRNENTALRRATR 488
M+ T +LE+ + KN+ K E D + LD+E RR+ K N +++NE T L+
Sbjct: 400 SQWMDHATYLQNELEKTKSFLKNQDKLETDLETLDKEMRRMNKANRSMKNEKTTLQATV- 459
Query: 489 SQEDRVKDLSRAKETLLELVAELNEIINKQKTQFIEFEEANTALRRTLDNLRVNMHAQSE 548
L + M +SE
Sbjct: 460 -------------------------------------------------GLHLKMAERSE 519
Query: 549 ESKAFKSYSSSLERQLQAFQRASEQLSLERGQLEEKYSSLRGDYAIMREDMQIILGKVNQ 608
E K K+Y+ L QL A Q +S++++ E L Y ++ DY + D Q+++ +V+Q
Sbjct: 520 EYKILKNYADFLHYQLTALQNSSKRITQEYESLNTDYVQMKVDYDLHTRDFQVLVERVDQ 579
Query: 609 TMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGMIRRDLGRR--TRIMEKKG 668
T+ ++++++RA GFAEWA T IR R ++IME+K
Sbjct: 580 TIEFLRMVSKRANGFAEWAGKYSSFTP---------------IRHPYNTRYKSQIMEEKD 639
Query: 669 -EQEKTKRDIEEIREKVDAIIAALE--KGNMIADTTTPDTPIGNPQAGLPFPP-----KI 700
+ +K +++I + E+V I+ L KG DTT PI + + +PP I
Sbjct: 640 KDMDKMRQEINNLGEQVSKILELLSMGKGKAAVDTTQSSNPIQDTDDPI-YPPGFTPYHI 659
BLAST of Spg028099 vs. ExPASy TrEMBL
Match:
A0A5A7T1W2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00060 PE=4 SV=1)
HSP 1 Score: 63.2 bits (152), Expect = 6.4e-06
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 0
Query: 767 ISGTGGVTRSGKCYTPDQLLNLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREP 826
I G GG + + T LL + N RFGLGYKP D IR+Q+++K++RL + E RE
Sbjct: 1372 IMGGGGYSLNKNLET---LLKIPSNDGRFGLGYKPSIYDKIRLQEKKKKKRLVKLEMREF 1431
Query: 827 EYGEKNIPHLYHSFESAGIIRPGD 851
+ K IP LY +F+SAGI D
Sbjct: 1432 DPSIKLIPELYDTFKSAGISYSSD 1452
HSP 2 Score: 224.2 bits (570), Expect = 2.2e-54
Identity = 168/498 (33.73%), Postives = 234/498 (46.99%), Query Frame = 0
Query: 12 SSSSEYDELGTVLQWAEQTQLKHGDSLPYKSLVSSSFSGQVQVISNELGELKAIWE---- 71
S S++DE VL+WAE+ Q K GD + S +S Q+ N+L LK IWE
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGDDINNSSQISVLSRCQLSFTQNDLANLKMIWEALTP 68
Query: 72 ------------------------------EFWDPAYKCFAFQDFDLVPTIEEYHTMLNI 131
FWDPAY CF F DL+PTIEEY ML++
Sbjct: 69 QRRFMFSKKYGHIVELMYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSM 128
Query: 132 EEKGGDMIYCFNPQLTAKRTLSKFL-AVHLKEVQKNVKVKGVEESISADYLTELARKHIN 191
EK +++Y FNP+ T KRTLSKFL VH E+QK +K+KG EE++ DYL ++ + +++
Sbjct: 129 PEKEREIVYFFNPKQTTKRTLSKFLETVHAAEIQKYIKIKGGEENVPFDYLIKMTQTYVD 188
Query: 192 EEKGLVLLALCIYGMVLYPRVKRYVDDNVLKLFFSIEQGVDPAIPLLAETVRALNYCKSS 251
E+KGL LLALCIYG V++P+ + YVD V+KLFF +E+GV+P IP+LAET R+LNYC++
Sbjct: 189 EDKGLTLLALCIYGAVIFPKAEGYVDGKVIKLFFEMERGVNPIIPILAETFRSLNYCRNK 248
Query: 252 KGGKLR-------IW-HGPMELKFSEERTMGVLLF------------EFQIRACD----- 311
GKL IW H +KF E L F EF + D
Sbjct: 249 GEGKLNCCLPLLYIWIHS--HIKFPAEFRCPRLDFSSPWNLIRNTISEFGMAVWDPTYPR 308
Query: 312 LEDTLD-----------------APKSLNLQMRELPHSPSSRPLG---MRPLCSVVGLAA 371
E L K++ + R+ P P G PL + +
Sbjct: 309 KEAWLSFFAKLTSKNVVWKAQWMPLKAVIYRCRDFHSMPLLGPRGGVNYTPLLVLRQVWL 368
Query: 372 KL------------------DSNEKKRQVLTSWTTVRRINGNSHSEGVTPEYLQWRIKRR 410
K D KKRQ + +W ++R+I H EGV Y W+ RR
Sbjct: 369 KQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVISGYEAWQANRR 428
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0036941.1 | 8.6e-82 | 34.53 | girdin-like [Cucumis melo var. makuwa] | [more] |
KAA0036949.1 | 8.1e-80 | 34.97 | girdin-like [Cucumis melo var. makuwa] | [more] |
KAA0066094.1 | 3.2e-68 | 34.71 | girdin-like [Cucumis melo var. makuwa] | [more] |
KAA0036933.1 | 3.9e-66 | 31.98 | uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa] | [more] |
KAA0036933.1 | 1.3e-05 | 44.05 | uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T5S7 | 4.2e-82 | 34.53 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=... | [more] |
A0A5A7T6E2 | 3.9e-80 | 34.97 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=... | [more] |
A0A5A7VFL0 | 1.5e-68 | 34.71 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00850 PE=... | [more] |
A0A5A7T1W2 | 1.9e-66 | 31.98 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5A7T1W2 | 6.4e-06 | 44.05 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
Match Name | E-value | Identity | Description | |