Spg027940 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg027940
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold2: 39528061 .. 39530154 (-)
RNA-Seq ExpressionSpg027940
SyntenySpg027940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACACTTCTCAGCTAATTCTAATTCCGAAATAACTCATATTCCTATAGGCATTAGCCACCATTATTTGGTCAAGGATTTGTTAACACACTTAACTCATCCTCGTAAGTGTAACCCTTCCACTTTCAGATCCCAGAGGCATGCACCAACAGGCTACCGAAGGGAAAGACAACTGTTGGTAATTAGCCTAAGTGACCTTATCCTTTTCAGGAGTTCACAGTGTTACGAATCCTATGATCAGGCCCTCCGAAGTGATGGTTGCTCCAGGACAACACGCAGACGGATCATAAGACTCTCACGGTGAGACCTATGGGTGGAGACCGAGGGATCCATTGACACGTGTCCCGCTCCCACTTACTATGGGCACTTTCCCCATTCAATTTGTTATTGACCCATGCAAACACTTTCCGAAGGAAGGCCGCGCTAAAACGACACGAAGCCGAGCATGGATCTCACGTTGTGAATATAGGGACGTAGGAGTGAAAACTCGATTTAAATCAAGTTTTGATTTTACCTCCCACTAAAGTGACCTACCGTATATTTTAGGGTTTATTAACCTAGATAAATCCGACTAATTCAATTTATCTAAGTCTAATCCTATTATAACTATTATAATGAGAATTGTAATGTTCTAGGTGAATTAAACTCTTTTAACATACCTAGAAACATTACATGCTAACATGACTATGGTTATTTTAACTCAGGTTCCGGTTTTGTTCCCAGGTAGCAGGTGTTTCATAAACCGTCAGCTTAAATACCTCCAGCCTTAGACAGAACTTATCCGGGAGAGTTCCCTTTTAACCATAGTAATGTATATTCTTTACTCTAATGATCTAGGTGTATTAAACTCTTTTAATAAACCTAGTGACATTGCATGCTAACATTTAACCTTGATTAATTCAACTCCAGTATTCCGGGTCAGTTCCCAGGTAGGAGGTGTTCCGTAAACCGTCAACTTAAGTACCCCCAACCTTAGACAGAACTTTACCGGTAGAGTTCCCTTATAATCATAGTAATGTTTGTCCTACTTAGTAGGTTAAAAATATTTCAAAACTAAGCAAGACTTAATTTTAATAGGATTAGAATTAACGTGATCTTAGGTCTAATTAATTTTAAACATTTTAAAATTAATTCATTTACCTATGATCCTATGTTTGCATGCAATCTTTATTATAGGTTGACGGTTTCGAATCATTAATTTTAAACTATTCAAATTTTAATGATTAGCCCTATAATCATGCATACTATAGTTTTAAAATAATTAACAATCACATTCAAGTTAAATATAATAAAACTATATATCTTGGACTGCATTGCATGAATTTAATATAACAATTATATTAAGCTATGGATGTTTCATGCTCAATGCAACTTTGATTTCCTTATTAAATAATTATAAAGATTATATTATTGCCAAACAAGGTAAATCAAAGTAGCATGCTGCAAACAACTTATCAAATATAACTCTTTATATTTAATTAAGTAATTTCATGCATCATGCTATTCCATTTTCATGATATTAATATAACTCAACTATATATTAAAAACTCATGAAAATAAACCATGCATTTCAATCCATACTTATAACTAATTATAATATATATAAAATGCATGAGCATGCTTTATAACCTAAGGTGGGATTTTAAATCTAAATGACATCCATAAAGCATTTAAATAGCGTATAAACCGATTAATTGGCCCCAAGGCTAAAATAAAACACATAAATTACAATAATTTAAGCTATTTTATCCTAAAAACATCCTTCTGCAGCTTCAGAACAGGACTAGACTGCACGAACCAACCCGAACCGCTTCAAACCGGACCCCAAAATGCCAAACCAAGCTTCAATTGGCTGGATCGGGCCAAACCAGCCCCAGACCAGCCCCAAATCACTGAACCGGACCGCCTTCAGTCGTGCCTCACAAAACCTAGTCGCATGCCGCAAGAAATCGTGATAGCTTCACAAGGCTTACGCGATCGTCAACCTACGCCTCGCGAAATCGCGACAACGTCGCGACGCTTCTGCGTCTGGAAGCAGCATCTGGGCATTCCAACAGCTGTTTCTCGCATTTGGCCTCATTTTTGGAAGTGA

mRNA sequence

ATGAGACACTTCTCAGCTAATTCTAATTCCGAAATAACTCATATTCCTATAGGCATTAGCCACCATTATTTGGTCAAGGATTTGTTAACACACTTAACTCATCCTCGTAAGTGTAACCCTTCCACTTTCAGATCCCAGAGGCATGCACCAACAGGCTACCGAAGGGAAAGACAACTGTTGGTAATTAGCCTAAGTGACCTTATCCTTTTCAGGAGTTCACAGTGTTACGAATCCTATGATCAGGCCCTCCGAAGTGATGGTTGCTCCAGGACAACACGCAGACGGATCATAAGACTCTCACGGTTCCGGTTTTGTTCCCAGTATTCCGGGTCAGTTCCCAGCTTCAGAACAGGACTAGACTGCACGAACCAACCCGAACCGCTTCAAACCGGACCCCAAAATGCCAAACCAAGCTTCAATTGGCTGGATCGGGCCAAACCAGCCCCAGACCAGCCCCAAATCACTGAACCGGACCGCCTTCAGTCGTGCCTCACAAAACCTAGTCGCATGCCGCAAGAAATCGTGATAGCTTCACAAGGCTTACGCGATCGTCAACCTACGCCTCGCGAAATCGCGACAACGTCGCGACGCTTCTGCGTCTGGAAGCAGCATCTGGGCATTCCAACAGCTGTTTCTCGCATTTGGCCTCATTTTTGGAAGTGA

Coding sequence (CDS)

ATGAGACACTTCTCAGCTAATTCTAATTCCGAAATAACTCATATTCCTATAGGCATTAGCCACCATTATTTGGTCAAGGATTTGTTAACACACTTAACTCATCCTCGTAAGTGTAACCCTTCCACTTTCAGATCCCAGAGGCATGCACCAACAGGCTACCGAAGGGAAAGACAACTGTTGGTAATTAGCCTAAGTGACCTTATCCTTTTCAGGAGTTCACAGTGTTACGAATCCTATGATCAGGCCCTCCGAAGTGATGGTTGCTCCAGGACAACACGCAGACGGATCATAAGACTCTCACGGTTCCGGTTTTGTTCCCAGTATTCCGGGTCAGTTCCCAGCTTCAGAACAGGACTAGACTGCACGAACCAACCCGAACCGCTTCAAACCGGACCCCAAAATGCCAAACCAAGCTTCAATTGGCTGGATCGGGCCAAACCAGCCCCAGACCAGCCCCAAATCACTGAACCGGACCGCCTTCAGTCGTGCCTCACAAAACCTAGTCGCATGCCGCAAGAAATCGTGATAGCTTCACAAGGCTTACGCGATCGTCAACCTACGCCTCGCGAAATCGCGACAACGTCGCGACGCTTCTGCGTCTGGAAGCAGCATCTGGGCATTCCAACAGCTGTTTCTCGCATTTGGCCTCATTTTTGGAAGTGA

Protein sequence

MRHFSANSNSEITHIPIGISHHYLVKDLLTHLTHPRKCNPSTFRSQRHAPTGYRRERQLLVISLSDLILFRSSQCYESYDQALRSDGCSRTTRRRIIRLSRFRFCSQYSGSVPSFRTGLDCTNQPEPLQTGPQNAKPSFNWLDRAKPAPDQPQITEPDRLQSCLTKPSRMPQEIVIASQGLRDRQPTPREIATTSRRFCVWKQHLGIPTAVSRIWPHFWK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg027940.1Spg027940.1mRNA