Spg027590 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg027590
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Locationscaffold13: 21430829 .. 21439543 (-)
RNA-Seq ExpressionSpg027590
SyntenySpg027590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTACCACTGGATCTTCCTTGCTATCCTCAAGCCATTGGAACGGATTGTGGGATCCTCGAGTGATGGAATTAAAAGGAAAAATCTTGAACAACAAGCTTATGGAGGTGGGTATGGTGAGCTTCAATTTTGGCAGCAATTCAGTAGGTCCTCAGCTTAGTTTCTTCAGAAATCTTCTTCCCTTTTATAGAGGGATAAATGAAGAAGAAAACCCCCACAGATTGACACTCAATCACCTCCAATTTAGTGGAGTATGTAGTGACTTAAGAGAGGGGAGTGCATGGGTTTAGTCAACATGCACTCCACCTCCAAAAAATCAAAATTAATTTTGATTTTAATTAATTCAAGATTATCTTGAATTAATCCAGTTAATTATTTAATTTTAAATAATCTGAATTTTGAAAAATCATTTTTTTTCAATTTTTCAATTTTAAATTAATTCAAAATAATTATTAATTAAATAATTAATTATTAATTTAATATCTTAATATTAAATTAATATTTTGCCACCATTCCCGAACATTTCCGAAATGTCATTTTCGAATCATGAATCCCTATTCTTGTTTTTGATATTTAAATCATATTTAAATATTAAATATCTCACACACTCGGTTTTCACAAAACCTGACGTACCGACAACGCCTATCACCTTTATTCATTTCTCTCAACATGAACTTAAAGTAATTCATATTTTATCCATCATATTGTTCCAAAGGTTAGTCTCGAGCTAGCAAGGGGACCTAATGGACCTACAGATCATGGGCTCCAACGGTACAAGGTTAAACTGGCCAAACTCTTTCAACCTAGCCAACCAACATCCGTTAACTACCAGGACACTCAACTATAGCCTAGTAGTTGAACTCCCCTCACTGTAGATATATTTCTATCCACTCGATATAACCATGATTAGTAAGTCAATCCTTCACAGGTCTTTTGTTATTATAGAAAGGTCAAAAGTTCGTTTTACCCCTATAGCACATCTTAGTTCCTTAAGTCCACTGGTCCTCTAATGAACAATTTTTTTCATGGTCCAACCATTAAACAAGATCCCTCTCGGGTCAATGAGAGGGTGGGGCCCCTTGTTCAAGTCTTGGATTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTGAATAGGGTAAGAGTGAATTTCGTCTTGCTTAACTATGTCCTTAGCCATCCATCTAGCATTATCCCCAAAATGGTAGGATTATTGAACGGAACTTTATGACCACTCTCACCCATGCAGATCAAAGGATAATCCTAAACGAACAGGAGCTCATAGTAAGCTCAGGATTAAGATCGAGTTACCTAGGTCATCGCATGAAATAATCAGTCTTAACAGTAAACGACGTTATAAAGTAAGAGTGACTTATGTCTTGGTCCTGTCTTGTGTAAACATCTTTTACACAGGATGCCCCTACTTACATGTCTTTACACGAACGATCCAGGATCACGTCGTTTGCCTTTTTCGCAAAGTAGGTCGCATCCATAGTGTTACCAGAACAAGGTACCCAACCTTATTCATTTACTATAGACAATTTAGGTTATATACTTGAACTCGATTCCTATCCATATTCACGATATAGTTCGAGTATCTCATGTTATAACCATGGATGTTTCTATTGGATTATAAGATATAAATAAACAATTTCACTGAATAACATCTTTATTATATAAAGGATAACAAAACTTGAGTTCTAGGACACAAACCCCAACAAACTCCCACTTGGACTATAACTCAAGTGAGAATACAATATTGTGAGGTAACTTAACACTATACCATATGCTAAAAACTTGTAGTCCTAAATTCTGGAGATGTCTCTCAAACACTTTAGCCGTGAGGGAGTAAATGGATCAGCCATGTTCTGTTCTGAAGCTATCTGGGTGACGATTTCGTCTCCTATTTGTACTATCTCCCGGATGAGATGGTATTTGAGTACAATGTGCTTTCCTCGTTGATGGCTTTGAGGTTCCTTTGAATTTGCAACTGCTCCACTATTGTCATAATAAAGAGTGATGGGCAAGTGCATGTTTGGAACAACTTCTAACTCATTTAGAAACTTTCTAAGCCACACAGCTTCCTTTGATGCTTCACAGGCTGAAACATATTCAGCTTCCATTGTGGAGTCGGCAATTCATGTTTGTTTTGAAGGTGTACATATTACACATGCGGAAGCAATTGAAGATCGAAAGCACTTAAGACATTCAATTTTGCTCCTAAAGCATGCATGTTCTATAAAAGACAGAAAAGAGAGTTTAGAGAAAACCAACCTTTGTAGCTCACAAATGAGGTACTCCTTGTGGTGTTTTCCTTCTCCAACTTCTCTTGGACAACCTTTAGAGTCTTCCCTACTATTCTCCGGGCCGAGAACGACTTGTGGGAGTCTATAGTGATAGGGAATGGGAAGGGAATGCTTGAAGGTTCAAGCTCTATGGAGATATGAGATGAGAGAGTGATTGAGGAAGAAATTCAGCAGCATAACATTAAGGTAAATGCTATCCCTCTCTCCAATCTGATTCTTCTTCTACTTATAGAGAGAATCCATGCAAGAAGAAGCCTCAAGATGCAAGACACATGGTGGTCTTAAGGGTGAAAGTGGAAGCTAGGTGTTCAAACAACATTACATGCAAGTATGCATGTTTGTGGTGTAATTCCACTTTGAATCTTCATGCAAGAGTGGAATTACATCATTTTCCACTTACCATGATTCAAAATCAGATTTCAAATGTTCATTTATGATATTAATATCAATTCTAAATGTGACATTAATATATAAGATCATATTTGAACCTTGCCCAATTGATTATAAATGATTAAGCAAGTTAATCACCTTAATATTGTGCATCTTTTATATATGAATCTTAATTCATGTATATAGTATTTAAAACCCTTTTAAATACTTTATCTCTCATTTTCTAATTTAATTCATAATTAAATTATTGTGTCAAACACAATTTTACGATAATACCCTTTTTCCCGACTTTGAACAATTCAAAGAATCCTATCAATTTGTTCTAGGCTATATTCCGATATGAGCTAGTAGGGGGACCTAATGGACCTATAGATCATGGGCTCCAACGATTCGAGACTAACCGACTAATCTCATTATTCAAGCTAGCCAACATTCGTTAACTACCGGGACACTCCACTATAGCCCGATAGTTGCACTCCCCTCACTATAGATATATTTCCGTCCACTTGATTTAACCATGTTCAGTAAGTCGTTCCTTCACAGGTTGTTCGTAGCTATAGCTAGGTCAAATAACCGTTTTACCCCTATAGTACTTCTTGTTCCTTAAGTTCCACTAATCCTCTAATGAACAATCGGTTTGTGGTCCAACCATCAAACCTAAGTCCCTCTCGATCCAACGAGAGGGTGGGGCCCCTTGTTCAAGTCCTGGAGTTAGTACTTAAGAGAACAACCTCTCTGCTATCCCTGAAAAGGGTAGGAGTGAATTCCGTCTTGCGAAACTATGTCCCCAGCTATCTATTCGATCTTATCCCCAAAATGGTAGGCTTGTTGAGTCGGCGATGCTGGCCACTCTCACCCATGCAGATCAAAGGATAATCTCGTATAAACAGGAGTTCATAGCTCGCTCAGGATTAAGAACGAGTTACCTAGGTCATCTATGAGAAATAGTCAGTTTCTTCGGTAAACGGCGTTATAAAGAGAAAGTGACTTATTTCGTGGTCCTGTCTTATGCAAACTCATTGCATAGGACACCCCCACTCGCATGTCTCCACATGAACGACTTAGGATCTCATCGTTTGTACTTAATACAAAGTGGGCCGCGTCCATAGTGTCACCAGGATAAGGCACCCAACCGTATCCTTATACTATAGACTATTTTGACTATAAACTTGAACTTGATCCTACGATATGTCCCTACATATAGTTCGAGTATTCATTTTATAGTCAAGGATCTTAGTTTATTGGATTTAGGTTAATCATTCGCAATGTATATATTCAATAACAACTTTTACTGAATAACCTCAATAACGTCTTTATTGAAAATAGAATATGTTTAATGATTTACAAACTACGAGTTTATAGGACATTAAACCCAACATGTTTAATACTTCTCCACACTACTGCTCCTCCATTCAGAGTGAACACAGATCCTGATGTGGATCTCCTTGAGTTTATGTTGGTTTGGAAATCTGAGTCAGTGTATCTAGTAAGGATCAAATCCTTAGATCCATACACTAGCGAATAGTCTCTTGTTCTCCTCAAGTATTTGAGGATATTCTTAACGACAGTCCCATGTGCTTGACCAGGATTGGACTGATATCTGCTGACAACACCTATTGCATAACATATGTCGGGACGTGTGCATTGTTGGGTTTAATGTCCAATAAACTAATAGTTTGTAAATCATTAAACATATTCTATTTCCAATAAAGTCGCTATTGAGGTTATTCAGTAAAAGATGTTATTGAATATGTAAGTTGCGAATATTTATGTTGGGGTTTATGTCCTAGAACTCAAGTTTTGTTATCCTTTATATAATAAAGATGTTATTCAGTGAAATTGTTTATTTATATCTTATAATCCAATAGAAACATCCATGGTTATGACATGAGATACTCGAACTATAATCATAAATATGGACAGGGATCAAGTTCGAGTATATGTAAACCCGAGACTTTCTTTAGATAACTTTCTCTTGTCATCTATTGTGGAAGTTGGACCTAAGTTGTGTTGTTTCATTGTTGAAAGACAATAGCAAGTTTTGTGGTTATTGTGGTTTCATTGTTGGTTTAAGGTGTTGGAACTTACCAATTTAAAAGAAGAAATGGAACAAAAGTGAAAAAGGAAAGAAAAGGAAAAAGAAAATGAAATGGGGAAAAGAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAATGGACAGCAATGACTCCACCACCGACAACAATTTTTATCAGCTCATTTTAGGCCATTCTTCTCAATATTTTCCACCCAAAATTTCAGAGCACTTGAGGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGAGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTAAACAGAAGGAACTAAGAGGTGAGGTTTGATTTTATTGAAAGTTAGTTCATTTTCTAGCAAATTTCATGAAGGAAGCTTGAGCTAAATCGTATGAGAAGTTAATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCGGGGGTGTACAAGTCGAATCAGAAGCTCTATTTGGTATGGTTGGAAATCTTATTCAATTTACTACAACTTTCATGAAGATTTTGTGAGCCAAAAATGACTTTAAGTAGGGTTAATTTCAGGAGTTAGATAAAGGGTAGCAGGGAACCTCGAATCTGTGTTGTCTGTGTTCGAGGCAATTCTGGGAAAATCGGTTGGGAATCTCATTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTTCATTAATATTGGTTAAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAGTAGAATGTGAATGTGATTCTTAATCCAATTGTTAAAAAATTCGTGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTGAGTGACAAAATGAATTTCGAAAATTGTTTCCAACGGTTACTCATTTCTAGACGTTTTACATGTTTTTCTATGGATGATACATGATTTCTATGAATGGTTTCAAGCATAAGTTTTGAGCATAGATTTTCTAATGAGGTTTATATACAAGCACGTGGCTGATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGCAAAGTATGGATTAGCAAGTACTTCTAAATGATTTTCAGTTTTTCACGAGCAAGCTGAGTAAGCTTAAGTTTTACAAAAGATTATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACAATGGGAGTGCTGGGCAGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCCGTCATGTTAGTTAAAACGTTTGATGTACTTGATATGCCTTGCTAGATTTTAATGACGAACTTGCGAGATATTTTAGAAAGCCTTTTTCATTACACGTTTATGTTAAACGCTTGAATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTCCATAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAAGGATTGGATAATATAGTCCCAGAGGTCGTGGTTGTATAAACCCTAGTTGTATATGTTTTTGGTTGTGACATCTATATCAGGTTCTTATCCGAACCAAGTTATGTCAGGGCGGCACCTCGTGTTTGTTGGAAGTTTTTTTCCAGGGATTCCGCTGTGTTCTGTTTCATGTAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAACGTTCAGGAGGGTCAGCGGGTATCATTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGAGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAGTATATAACCTAAATTGTCTATAGTAAATGAATAAGGTTGGGTACCTTGTTCTAGTAACACTATGGATGCGGCCTACTTTGCGAGTAAGGCAAACGACGTGATCCTGGATCGTTCGTGTAAAGACATGCGAGTAGGGGCATCCTGTGTAAAAGATGTTTACACAAGACAGGACCGAGAAATAAGTCACTCTTACTTTATAACGTCGTTTACTGTTAAGACTGACTATTTCATGCGATGATGTAGGTAACTCGGTTTTAATCCTGAGCTTGCTATGAACTCCTGTTCGTTTAGGGTTAATCTTTGGAACAATATGATGGATAAAATATGAATTACTTTAAGTTGATGTTAAGAGAAATGAATAGATGTGATAGGCGTTGTCGGAACGTCGAATTTCTGTGAAAATCGTGTATGTGAGTATTTAATATTTAAATATGATTTAAATATCGAGAACATGAATAGGGATTCATGATTGAAAAATAACATTTCGGAAATGTTCGGGATTGATGGCAAAATATTAATTTAATATTAGATATTAAATTAATTATTAATAATTTAATTAATAATTATTTTAAATTAATTTAAAATTGAAAAAATTGAAATTTGATTTTTCAAATTTTTAGATTATTGAAATTAAATAATTCAATGAATTAATTCAAGATAATCTTGAATTAATTAAAATCAAAATAAATTTGATTTTTTGGAAGTGAAGTGCATGGTGACTAAACCCATGCACTCCCCTCTCTTAAGCCACACCATTCTCCACTAATTTGAAGCTGAATTGGTGTCAATCCCAGGGCCTTTTCTTCATGTTTGTTCCCTCTATATAACTGAAGAAGAAGGCAGAATGAATCAAGCGTGAAAGCTAAAGAAATTCTGCCAAAATACACACTCACAATACCGACCTTCATATGCTTGTTCTTCAAGCTTTTTCCTTTCAATTCCATCACTTGAGGATCCCACAATCCATTCCAAAGGCTTGAGGATAGCAAGGAAGATCCAGTGGTAGTTCGTGACTCATTGGTGAAGAAAAACAAGAAGGAAATCCAATCAATTTCTCCATTGAAACAAGGTTAGTAAATTGTCTCTATTTTTCTCCATATGAACAGCATGCAATGTTTGATCAAATTGAGCTTCTTATGTACATAATATCCAAAATTGCTTCTGTATTTTAGATATTAACACTTTCAAGATCTGCATGGGTGAGAGTGGCTCAGCATCGTCGACTCAATAAACCCCCTATTTTAGGGATAGGATCGAGTAGATGGCTGGGGACATAGTTCTGCAAGATGAAATTCACTCCTACCTGATAGCGAGCATAGCAAGCTATTTTTCCCTAATTATTTTAGTTAGTCTTTGACATTAAATTGGCCCAAATTATGCATTTTAATGTTCTATTTGTAGGAATCAATTATTGGAGCTAAATCAAGAAAATGGAGTTGATCGGGTGTTCGGGACCAAAAGAAGAGCAAAAAAATAAAAAAGAATCAAAGTTGGAGGCTTAAGTTTGAGGCAAACCCGAGAGCTAGCGTCAAGACGCTGCTTTCTGCACTTCTCGACGCTGGTTTTCCTTTTATGTTTTTGGCAATAGCAGGGACAGTGTCGCGACGCTACCGACAATTTCCTATAAATACATCCTTAATTGCTACAGCCAAGGGAAGTTCATTTGGTTAG

mRNA sequence

ATGAACTACCACTGGATCTTCCTTGCTATCCTCAAGCCATTGGAACGGATTGTGGGATCCTCGAGTGATGGAATTAAAAGGAAAAATCTTGAACAACAAGCTTATGGAGGTGGGTATGGATGCCCCTACTTACATGTCTTTACACGAACGATCCAGGATCACGTCGTTTGCCTTTTTCGCAAAGTAGGTCGCATCCATAGTGTTACCAGAACAAGAGAGAATCCATGCAAGAAGAAGCCTCAAGATGCAAGACACATGGTGGTCTTAAGGGTGAAAGTGGAAGCTAGGTGTTCAAACAACATTACATGCAAGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCGGGGGTGTACAAGTCGAATCAGAAGCTCTATTTGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCATTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGAGCTAAGCTAGCAGGTGGTCCGGGAGGGGGATCCCACAATCCATTCCAAAGGCTTGAGGATAGCAAGGAAGATCCAGTGGTAGTTCGTGACTCATTGGTGAAGAAAAACAAGAAGGAAATCCAATCAATTTCTCCATTGAAACAAGCTAGCGTCAAGACGCTGCTTTCTGCACTTCTCGACGCTGGTTTTCCTTTTATGTTTTTGGCAATAGCAGGGACAGTGTCGCGACGCTACCGACAATTTCCTATAAATACATCCTTAATTGCTACAGCCAAGGGAAGTTCATTTGGTTAG

Coding sequence (CDS)

ATGAACTACCACTGGATCTTCCTTGCTATCCTCAAGCCATTGGAACGGATTGTGGGATCCTCGAGTGATGGAATTAAAAGGAAAAATCTTGAACAACAAGCTTATGGAGGTGGGTATGGATGCCCCTACTTACATGTCTTTACACGAACGATCCAGGATCACGTCGTTTGCCTTTTTCGCAAAGTAGGTCGCATCCATAGTGTTACCAGAACAAGAGAGAATCCATGCAAGAAGAAGCCTCAAGATGCAAGACACATGGTGGTCTTAAGGGTGAAAGTGGAAGCTAGGTGTTCAAACAACATTACATGCAAGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCGGGGGTGTACAAGTCGAATCAGAAGCTCTATTTGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCATTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGAGCTAAGCTAGCAGGTGGTCCGGGAGGGGGATCCCACAATCCATTCCAAAGGCTTGAGGATAGCAAGGAAGATCCAGTGGTAGTTCGTGACTCATTGGTGAAGAAAAACAAGAAGGAAATCCAATCAATTTCTCCATTGAAACAAGCTAGCGTCAAGACGCTGCTTTCTGCACTTCTCGACGCTGGTTTTCCTTTTATGTTTTTGGCAATAGCAGGGACAGTGTCGCGACGCTACCGACAATTTCCTATAAATACATCCTTAATTGCTACAGCCAAGGGAAGTTCATTTGGTTAG

Protein sequence

MNYHWIFLAILKPLERIVGSSSDGIKRKNLEQQAYGGGYGCPYLHVFTRTIQDHVVCLFRKVGRIHSVTRTRENPCKKKPQDARHMVVLRVKVEARCSNNITCKIFEQTRRISGVLWCFEHSGVYKSNQKLYLVSCRVFENEEFDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGGSHNPFQRLEDSKEDPVVVRDSLVKKNKKEIQSISPLKQASVKTLLSALLDAGFPFMFLAIAGTVSRRYRQFPINTSLIATAKGSSFG
Homology
[Close]
BLAST of Spg027590 vs. NCBI nr
Match: KAA0058280.1 (uncharacterized protein E6C27_scaffold274G006090 [Cucumis melo var. makuwa])

HSP 1 Score: 125.6 bits (314), Expect = 8.0e-25
Identity = 74/143 (51.75%), Postives = 89/143 (62.24%), Query Frame = 0 

Query: 124 VYKSNQKLYLV-SCRV--FENEEFDVPRGNRSSLQTGELDKT---------------VEI 183
           ++KSNQKLYLV   R+   EN +  +PRGNR SLQT ELDKT               V I
Sbjct: 52  IHKSNQKLYLVLEVRISNLENLKSGMPRGNRLSLQTRELDKTVIFPLSTLSVLRDNNVVI 111

Query: 184 ELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSL 236
           ELPVPD LPTSAESS ++SSTW+ELY ESVH+             ++++FNV  G    +
Sbjct: 112 ELPVPDILPTSAESSGSNSSTWLELYFESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIV 171

[Close]
BLAST of Spg027590 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-23
Identity = 73/143 (51.05%), Postives = 90/143 (62.94%), Query Frame = 0 

Query: 124 VYKSNQKLYLVSCRVFENEEFDVP-RGNRSSLQTGELDKT-----------------VEI 183
           V+KSNQKLYL      ++ ++DV  RGNRSSLQ+GELD T                 VEI
Sbjct: 38  VHKSNQKLYL-DIESGKSGKWDVMLRGNRSSLQSGELDTTVIFPLSTLSVLRDNDAVVEI 97

Query: 184 ELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSL 236
           ELPVPDTLPTSAESS ++SSTW+ELY ESVH+             ++++F+V  G    +
Sbjct: 98  ELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGSTGIV 157

[Close]
BLAST of Spg027590 vs. NCBI nr
Match: TYK26572.1 (putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-23
Identity = 73/143 (51.05%), Postives = 90/143 (62.94%), Query Frame = 0 

Query: 124 VYKSNQKLYLVSCRVFENEEFDVP-RGNRSSLQTGELDKT-----------------VEI 183
           V+KSNQKLYL      ++ ++DV  RGNRSSLQ+GELD T                 VEI
Sbjct: 38  VHKSNQKLYL-DIESGKSGKWDVMLRGNRSSLQSGELDTTVIFPLSTLSVLRDNDAVVEI 97

Query: 184 ELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSL 236
           ELPVPDTLPTSAESS ++SSTW+ELY ESVH+             ++++F+V  G    +
Sbjct: 98  ELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGSTGIV 157

[Close]
BLAST of Spg027590 vs. NCBI nr
Match: TYK11835.1 (uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-23
Identity = 71/140 (50.71%), Postives = 83/140 (59.29%), Query Frame = 0 

Query: 124 VYKSNQKLYLVSCRVFENEEFDVPRGNRSSLQTGELDKTV---------------EIELP 183
           ++K NQKLYL             PRGNR SLQTGELDKTV                IELP
Sbjct: 52  IHKLNQKLYL------------GPRGNRLSLQTGELDKTVIFSLSTLSVLRDNNAVIELP 111

Query: 184 VPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEED 236
           VPDTLPTSAESS ++SSTW+ELY ESVH+             ++++FNV  G    +  D
Sbjct: 112 VPDTLPTSAESSGSNSSTWLELYFESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIVRGD 171

[Close]
BLAST of Spg027590 vs. NCBI nr
Match: TYK25935.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-23
Identity = 73/152 (48.03%), Postives = 87/152 (57.24%), Query Frame = 0 

Query: 124 VYKSNQKLYLVSCRVFENEEFDVPRGNRSSLQTGELDK-----------------TVEIE 183
           V+KSNQKLYL         + + PRGNR  LQTGELDK                  VEIE
Sbjct: 287 VHKSNQKLYL-------EIDKEWPRGNRPGLQTGELDKIVIFPLSTLSVLRDNDAVVEIE 346

Query: 184 LPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVS----------LEEDD 242
           LP+PDTLPTSAESS ++SSTW+ELY ESVH+  + +   + +  S          +  DD
Sbjct: 347 LPLPDTLPTSAESSGSNSSTWLELYFESVHVEMLFYKPSDARAASYVCWEGSAGIVRGDD 406

[Close]
BLAST of Spg027590 vs. ExPASy TrEMBL
Match: A0A5A7UT17 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006090 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.9e-25
Identity = 74/143 (51.75%), Postives = 89/143 (62.24%), Query Frame = 0 

Query: 124 VYKSNQKLYLV-SCRV--FENEEFDVPRGNRSSLQTGELDKT---------------VEI 183
           ++KSNQKLYLV   R+   EN +  +PRGNR SLQT ELDKT               V I
Sbjct: 52  IHKSNQKLYLVLEVRISNLENLKSGMPRGNRLSLQTRELDKTVIFPLSTLSVLRDNNVVI 111

Query: 184 ELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSL 236
           ELPVPD LPTSAESS ++SSTW+ELY ESVH+             ++++FNV  G    +
Sbjct: 112 ELPVPDILPTSAESSGSNSSTWLELYFESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIV 171

[Close]
BLAST of Spg027590 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.6e-24
Identity = 73/143 (51.05%), Postives = 90/143 (62.94%), Query Frame = 0 

Query: 124 VYKSNQKLYLVSCRVFENEEFDVP-RGNRSSLQTGELDKT-----------------VEI 183
           V+KSNQKLYL      ++ ++DV  RGNRSSLQ+GELD T                 VEI
Sbjct: 38  VHKSNQKLYL-DIESGKSGKWDVMLRGNRSSLQSGELDTTVIFPLSTLSVLRDNDAVVEI 97

Query: 184 ELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSL 236
           ELPVPDTLPTSAESS ++SSTW+ELY ESVH+             ++++F+V  G    +
Sbjct: 98  ELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGSTGIV 157

[Close]
BLAST of Spg027590 vs. ExPASy TrEMBL
Match: A0A5D3DSY7 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001810 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.6e-24
Identity = 73/143 (51.05%), Postives = 90/143 (62.94%), Query Frame = 0 

Query: 124 VYKSNQKLYLVSCRVFENEEFDVP-RGNRSSLQTGELDKT-----------------VEI 183
           V+KSNQKLYL      ++ ++DV  RGNRSSLQ+GELD T                 VEI
Sbjct: 38  VHKSNQKLYL-DIESGKSGKWDVMLRGNRSSLQSGELDTTVIFPLSTLSVLRDNDAVVEI 97

Query: 184 ELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSL 236
           ELPVPDTLPTSAESS ++SSTW+ELY ESVH+             ++++F+V  G    +
Sbjct: 98  ELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGSTGIV 157

[Close]
BLAST of Spg027590 vs. ExPASy TrEMBL
Match: A0A5D3CJX3 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00520 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.3e-24
Identity = 71/140 (50.71%), Postives = 83/140 (59.29%), Query Frame = 0 

Query: 124 VYKSNQKLYLVSCRVFENEEFDVPRGNRSSLQTGELDKTV---------------EIELP 183
           ++K NQKLYL             PRGNR SLQTGELDKTV                IELP
Sbjct: 52  IHKLNQKLYL------------GPRGNRLSLQTGELDKTVIFSLSTLSVLRDNNAVIELP 111

Query: 184 VPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEED 236
           VPDTLPTSAESS ++SSTW+ELY ESVH+             ++++FNV  G    +  D
Sbjct: 112 VPDTLPTSAESSGSNSSTWLELYFESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIVRGD 171

[Close]
BLAST of Spg027590 vs. ExPASy TrEMBL
Match: A0A5A7T9P7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1164G00060 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.5e-24
Identity = 73/152 (48.03%), Postives = 87/152 (57.24%), Query Frame = 0 

Query: 124 VYKSNQKLYLVSCRVFENEEFDVPRGNRSSLQTGELDK-----------------TVEIE 183
           V+KSNQKLYL         + + PRGNR  LQTGELDK                  VEIE
Sbjct: 287 VHKSNQKLYL-------EIDKEWPRGNRPGLQTGELDKIVIFPLSTLSVLRDNDAVVEIE 346

Query: 184 LPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVS----------LEEDD 242
           LP+PDTLPTSAESS ++SSTW+ELY ESVH+  + +   + +  S          +  DD
Sbjct: 347 LPLPDTLPTSAESSGSNSSTWLELYFESVHVEMLFYKPSDARAASYVCWEGSAGIVRGDD 406

The following BLAST results are available for this feature:
BLAST of Spg027590 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058280.18.0e-2551.75uncharacterized protein E6C27_scaffold274G006090 [Cucumis melo var. makuwa][more]
KAA0062409.11.2e-2351.05reverse transcriptase [Cucumis melo var. makuwa][more]
TYK26572.11.2e-2351.05putative Retrotransposon protein [Cucumis melo var. makuwa][more]
TYK11835.11.5e-2350.71uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa][more]
TYK25935.12.0e-2348.03gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of Spg027590 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg027590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UT173.9e-2551.75CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5A7V9N35.6e-2451.05Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15... [more]
A0A5D3DSY75.6e-2451.05Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5D3CJX37.3e-2450.71CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7T9P79.5e-2448.03Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1164G000... [more]
BLAST of Spg027590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg027590.1Spg027590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process
molecular_function GO:0016787 hydrolase activity