Spg027577 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg027577
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold13: 21239666 .. 21241318 (-)
RNA-Seq Expression	Spg027577
Synteny	Spg027577

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAAACAAGAGGGAGGAAAGAGAGAGATAATGAGGGAGAAGAAGTGCATGTTACCCCAGAGGCACCGGAGACAAAAGATAAGAGAAGGAAGACGCCAGAAGAAAGAGAGGCGAAGAGAAGAAGAAGGCAACAGAGGGCTGAGGTTACGGAAGTCGTGAGGAAAGTGATCGAGGACATTGCTGATGATGTGGCTGAAGAAGAACAACCAAAAGAACTTGAGGAAAAAGATCCTGAACAGAATGAGCCGGAAGTTGAAAATCTGCAAGAAGTGCTAGAGAAGCAAGTGGAAGATGTGCAAGAAAAAGGAAATGAACAGGAAGTTTAAGAGCAGGAGGTTCAGGCTGAAGTCATTGTACCAGAGATTCCATGTCGCCGCCTTCGGAAGCAGAAGGCTGGGAGAGTCAAGGTAATCCGAACAGATACTCCCTCGCTGTCGACGACAGAATCTAAGAAAGAACACTCTAAGAAAGAAGAACAAGAGAAAAGGGGTCAGAGGACCAGGTAAGAGAGGAAACCGAAAAGAAGGTAGAGGAAGAAATTCTGGCAAAGCAGCAAGAAGACAACGACAAAGGAGTTGCTGAAGCCCCGACAGAGATAGAAGAGGTTGATACTGAAGAACCGAGACTGTCGTATAATCGCTTCATCAATGATCTTGCCCGAGCAAAGTATATAGAGATGCTGAAAAGGGATTTTCTGTTCGAAAGAGGATTCGGTGATGATCTGTCGCATTTCTTAAGAGCTGGAATTACAAATCATAGTTGGGATCAGTTTGCGCGAAACCAGAACCGGTAAATTTAAATGTTGTTCATGAATTTTACGCGAATATAGATGAAGAAGAGGGGTTTCAAGCAATTATTCGTGGTGTGGCAGTCGACTGGAGCCCTGGTGCGGTGAATTCTCTATTTAATCTTCAGGATTTCCCACATGCCGGATATAATGAGATGGCGGCAGCGCCATCTAATGAGCAGTTGAACGCAACTGTTCGAGAGGTGGGAATCGAGGGGGCCCAGTGACGTTTGTCGAAGACAGAGAAGAGAACCTTCCAAGCGGCCTATCTTAAGAGTGAAGCCAACACTTGGTTGGGATTCATAAAACTACGCCTGCTACCAACAACTCACGACTCTATTGTCTCACGTGATCGAGTTCTTCTGGTATTTGCTATTTTGAGATCATAAAGTATAGATGTTGGAAAAATTATCTCCAGTGAAATACATTACTGTTGGAGGAAGAAGGTGGGTAAGCTCTTTTTCCCGAACACAATAACTATGTTGTGTCAAAGAGCTGGGGTTCCCATGAATGCAGAGGATGTCACTTTGATGGATAAAGGAATAATAGACACGTCGAACCTGGGAGGCTTCAAAGGAATCAAGAAGCATGCCAAGGCGGTTTGGTGTGCGACATCCATCAAATGCAAGAACAGTTGCAAATTCATTCCAGACGAATGGAGTTTGCCGAAAGGCAATTCCAAACCTTCTGGAATTATGTTAAGCGAGGGGATGTCGCGTTGAGGAGGGCCTTGCAATCTAATTTTTCTAAGCCTTATCTAGCCTTCCCAGTATTTCCTGATGATCTATTGAACCCCTGGATCCCGCCGCCACCGATAGAAAGAGAAGGAGATGAGGAGGAGGACCCTGGTCAGGAGGATTGA

mRNA sequence

ATGGCTAAAACAAGAGGGAGGAAAGAGAGAGATAATGAGGGAGAAGAAGTGCATGTTACCCCAGAGGCACCGGAGACAAAAGATAAGAGAAGGAAGACGCCAGAAGAAAGAGAGGCGAAGAGAAGAAGAAGGCAACAGAGGGCTGAGGTTACGGAAGTCGTGAGGAAAGTGATCGAGGACATTGCTGATGATGTGGCTGAAGAAGAACAACCAAAAGAACTTGAGGAAAAAGATCCTGAACAGAATGAGCCGGAAGTTGAAAATCTGCAAGAAGTGCTAGAGAAGCAAGTGGAAGATGTAAGAGAGGAAACCGAAAAGAAGGTAGAGGAAGAAATTCTGGCAAAGCAGCAAGAAGACAACGACAAAGGAGTTGCTGAAGCCCCGACAGAGATAGAAGAGGTTGATACTGAAGAACCGAGACTGTCGTATAATCGCTTCATCAATGATCTTGCCCGAGCAAAGTATATAGAGATGCTGAAAAGGGATTTTCTGTTCGAAAGAGGATTCGGTGATGATCTGTCGCATTTCTTAAGAGCTGGAATTACAAATCATAGTTGGGATCAGTTTGCGCGAAACCAGAACCGCCCTGGTGCGGTGAATTCTCTATTTAATCTTCAGGATTTCCCACATGCCGGATATAATGAGATGGCGGCAGCGCCATCTAATGAGCAGTTGAACGCAACTGTTCGAGAGATGTTGGAAAAATTATCTCCAGTGAAATACATTACTGTTGGAGGAAGAAGGAATAATAGACACGTCGAACCTGGGAGGCTTCAAAGGAATCAAGAAGCATGCCAAGGCGGTTTGGTGTGCGACATCCATCAAATGCAAGAACAGTTGCAAATTCATTCCAGACGAATGGAGTTTGCCGAAAGGCAATTCCAAACCTTCTGGAATTATGTTAAGCGAGGGGATGTCGCGTTGAGGAGGGCCTTGCAATCTAATTTTTCTAAGCCTTATCTAGCCTTCCCAGTATTTCCTGATGATCTATTGAACCCCTGGATCCCGCCGCCACCGATAGAAAGAGAAGGAGATGAGGAGGAGGACCCTGGTCAGGAGGATTGA

Coding sequence (CDS)

ATGGCTAAAACAAGAGGGAGGAAAGAGAGAGATAATGAGGGAGAAGAAGTGCATGTTACCCCAGAGGCACCGGAGACAAAAGATAAGAGAAGGAAGACGCCAGAAGAAAGAGAGGCGAAGAGAAGAAGAAGGCAACAGAGGGCTGAGGTTACGGAAGTCGTGAGGAAAGTGATCGAGGACATTGCTGATGATGTGGCTGAAGAAGAACAACCAAAAGAACTTGAGGAAAAAGATCCTGAACAGAATGAGCCGGAAGTTGAAAATCTGCAAGAAGTGCTAGAGAAGCAAGTGGAAGATGTAAGAGAGGAAACCGAAAAGAAGGTAGAGGAAGAAATTCTGGCAAAGCAGCAAGAAGACAACGACAAAGGAGTTGCTGAAGCCCCGACAGAGATAGAAGAGGTTGATACTGAAGAACCGAGACTGTCGTATAATCGCTTCATCAATGATCTTGCCCGAGCAAAGTATATAGAGATGCTGAAAAGGGATTTTCTGTTCGAAAGAGGATTCGGTGATGATCTGTCGCATTTCTTAAGAGCTGGAATTACAAATCATAGTTGGGATCAGTTTGCGCGAAACCAGAACCGCCCTGGTGCGGTGAATTCTCTATTTAATCTTCAGGATTTCCCACATGCCGGATATAATGAGATGGCGGCAGCGCCATCTAATGAGCAGTTGAACGCAACTGTTCGAGAGATGTTGGAAAAATTATCTCCAGTGAAATACATTACTGTTGGAGGAAGAAGGAATAATAGACACGTCGAACCTGGGAGGCTTCAAAGGAATCAAGAAGCATGCCAAGGCGGTTTGGTGTGCGACATCCATCAAATGCAAGAACAGTTGCAAATTCATTCCAGACGAATGGAGTTTGCCGAAAGGCAATTCCAAACCTTCTGGAATTATGTTAAGCGAGGGGATGTCGCGTTGAGGAGGGCCTTGCAATCTAATTTTTCTAAGCCTTATCTAGCCTTCCCAGTATTTCCTGATGATCTATTGAACCCCTGGATCCCGCCGCCACCGATAGAAAGAGAAGGAGATGAGGAGGAGGACCCTGGTCAGGAGGATTGA

Protein sequence

MAKTRGRKERDNEGEEVHVTPEAPETKDKRRKTPEEREAKRRRRQQRAEVTEVVRKVIEDIADDVAEEEQPKELEEKDPEQNEPEVENLQEVLEKQVEDVREETEKKVEEEILAKQQEDNDKGVAEAPTEIEEVDTEEPRLSYNRFINDLARAKYIEMLKRDFLFERGFGDDLSHFLRAGITNHSWDQFARNQNRPGAVNSLFNLQDFPHAGYNEMAAAPSNEQLNATVREMLEKLSPVKYITVGGRRNNRHVEPGRLQRNQEACQGGLVCDIHQMQEQLQIHSRRMEFAERQFQTFWNYVKRGDVALRRALQSNFSKPYLAFPVFPDDLLNPWIPPPPIEREGDEEEDPGQED

Homology

The following BLAST results are available for this feature:

BLAST of Spg027577 vs.


Match Name	E-value	Identity	Description

BLAST of Spg027577 vs.


Match Name	E-value	Identity	Description

BLAST of Spg027577 vs.


Match Name	E-value	Identity	Description

BLAST of Spg027577 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..121
None	No IPR available	COILS	Coil	Coil	coord: 273..293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..354
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg027577.1	Spg027577.1	mRNA