Spg027525 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCACTTTGTTCGATGCCTTCGTCGCCGAATTGCTCCTCGGCAAGTTCGTTAGGGCTCCTTCCTCTGTCCCTTCCTTCACTCCCGACAACGTCGGCTCTGTCTCTTCCGCCTCCATCGTGAAGTCGCCGTCGAGTAAGAAGGAAGAACCTAAGCCCAACAATTCCTCGATCAGGCCCAGATTTGCTTTCGAGTTCGATGGCCTCAATTGCCTCGAGACTCTCGTCCCCAATTGA ATGTTCACTTTGTTCGATGCCTTCGTCGCCGAATTGCTCCTCGGCAAGTTCGTTAGGGCTCCTTCCTCTGTCCCTTCCTTCACTCCCGACAACGTCGGCTCTGTCTCTTCCGCCTCCATCGTGAAGTCGCCGTCGAGTAAGAAGGAAGAACCTAAGCCCAACAATTCCTCGATCAGGCCCAGATTTGCTTTCGAGTTCGATGGCCTCAATTGCCTCGAGACTCTCGTCCCCAATTGA ATGTTCACTTTGTTCGATGCCTTCGTCGCCGAATTGCTCCTCGGCAAGTTCGTTAGGGCTCCTTCCTCTGTCCCTTCCTTCACTCCCGACAACGTCGGCTCTGTCTCTTCCGCCTCCATCGTGAAGTCGCCGTCGAGTAAGAAGGAAGAACCTAAGCCCAACAATTCCTCGATCAGGCCCAGATTTGCTTTCGAGTTCGATGGCCTCAATTGCCTCGAGACTCTCGTCCCCAATTGA MFTLFDAFVAELLLGKFVRAPSSVPSFTPDNVGSVSSASIVKSPSSKKEEPKPNNSSIRPRFAFEFDGLNCLETLVPN Homology
BLAST of Spg027525 vs. NCBI nr
Match: KAA0042638.1 (uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa] >TYK06039.1 uncharacterized protein E5676_scaffold376G001400 [Cucumis melo var. makuwa]) HSP 1 Score: 103.2 bits (256), Expect = 1.0e-18 Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of Spg027525 vs. NCBI nr
Match: XP_011654674.1 (uncharacterized protein LOC105435432 [Cucumis sativus]) HSP 1 Score: 98.6 bits (244), Expect = 2.5e-17 Identity = 52/78 (66.67%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Spg027525 vs. NCBI nr
Match: XP_023522684.1 (uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 90.9 bits (224), Expect = 5.3e-15 Identity = 50/83 (60.24%), Postives = 60/83 (72.29%), Query Frame = 0
BLAST of Spg027525 vs. NCBI nr
Match: KAG6579594.1 (hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 90.5 bits (223), Expect = 6.9e-15 Identity = 51/83 (61.45%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of Spg027525 vs. NCBI nr
Match: XP_022929066.1 (uncharacterized protein LOC111435766 [Cucurbita moschata] >KAG7017054.1 hypothetical protein SDJN02_22166, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 90.5 bits (223), Expect = 6.9e-15 Identity = 51/83 (61.45%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of Spg027525 vs. ExPASy TrEMBL
Match: A0A5D3C6N3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001400 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.0e-19 Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of Spg027525 vs. ExPASy TrEMBL
Match: A0A0A0KJT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146930 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.2e-17 Identity = 52/78 (66.67%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Spg027525 vs. ExPASy TrEMBL
Match: A0A6J1EM23 (uncharacterized protein LOC111435766 OS=Cucurbita moschata OX=3662 GN=LOC111435766 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.3e-15 Identity = 51/83 (61.45%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of Spg027525 vs. ExPASy TrEMBL
Match: A0A6J1E0L6 (uncharacterized protein LOC111026066 OS=Momordica charantia OX=3673 GN=LOC111026066 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.6e-07 Identity = 44/83 (53.01%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of Spg027525 vs. ExPASy TrEMBL
Match: A0A7J6FVL8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_020198 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.0e-04 Identity = 34/79 (43.04%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of Spg027525 vs. TAIR 10
Match: AT1G32928.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 6.9e-05 Identity = 34/80 (42.50%), Postives = 43/80 (53.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|