Spg027518 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg027518
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Glycine-rich cell wall structural protein-like
Location	scaffold11: 4274161 .. 4282957 (+)
RNA-Seq Expression	Spg027518
Synteny	Spg027518

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTACACTAGACAGTCTCTTAAGAGAATATGTCTTCCAAGATTATCTTTCTTGTGCTTCTGGGTGCTTTTGTCTGCACCACTTCTGTGGCTCGCGTGCTGAACTGCACCATTTCTGCCTCTAGTGATGATGGGGACATTTACAAGCTGATGAATGCCTCTTTACAATTTGATCCCCAATTTGGTGGTGGTATGAATTTTAGTGCTGGTTATGGTTCGGGTTATGCCGGTGGTATGGCTACTGGTGCTGTTTATGGTCCGGCTTTTGGAAATTATGGTGCGGGCTATGGTGGTGGTATGAATCCTAGTACTGGTGCTGGTGCTCGTGTTCCTCCTATTGGTACTGCTGGTATTGGTGGGGGTCGTCCTGTTGGTTTTGGTGCGAACGTTGGCGCGGGGGTAGGTGGTGGTGGTGGTTCGGGTGAGTGTCTCTTCTATGAGTTGCATCATTTCACATTCATGGGTCGTAACTCTTCCATGAGTTGCATATATCTCTTAACATCATCGTCCATGGGCATTGTTCTTTCATCCGACGGTCAAGTCTTTAATTTTCACCTTTTTCAAAATTGATAATCAATTTGAAGAAGAGTCATGCACTATGTTGAAGATCTCACATTGAAAAGATAAGTGGAGAATTCACAATATATAAGATACATGAGTTACTTCACTCATTGCCAATTGGTTTTGTGATGGAAGCCCATATAATATAATATGGTATCAGAGCCCATTAAACCCAAACGGGTATTCGGTCCAATAAAAAAAAATTGGGATCCGATCCAAGAATGGTGAACCTAAAAAGGCACCATCGAGGGGGCATGTTGAGGATCCCACATTGAAAAGATTAGTGGAAACTTCACAATTTATAAGCTACGAGGGTCAATAAAGTGGAGAACTCACAATAGGTAAGATACATGAGTTACTCCACTTATTGCCAATTGGTTTTGAGATGGAAGCCCATATAATATAATAGACTATTCTGACTAAAAATTTTCCTCCAACTCACTCCCCTCTTTCCCCGAGGAGAGAAAGGGACTTTCATTGGAGGAGAAACAAGAAAACTCATCGGAGAAAATAAGGATCTCTTTAGAGAGGAAGAAACTCATCGGAGGAGAGAAAGAGGGAACTCAATTGAGAGAAAGAAGTGAAAGACTTGAAGAGAGAAAATGATTTGGATCGGAATTTTTAATTTTCCGATGAGACCTTCGACCACCAATCAAGCCTATGGTGAACAAACTCCGACGGCCATCCAAACCTTGGATTTGTGGACAAGTGAGGAAGAAGAAGAAGGGTAGGTGATGGGCCCATCCTTCATGCATGTTGCGTTTCTTTCTTTTCTTTTATATTTTTGTTCCTTCTTGTGTGTGTTTTTAAATAATTTGATTTCTCCTCTCTTTACTTGAAAAGTCAAATCAAATTTCAATTAAAAAAAAAATTAAAATGTGTGTTTTTAATTAGGGTTTAGGCTTTTTTTTTTATAATTTTTTTTATGATTACTTAATATTTTGAAAAGTTAAAAAAAGATCAATTGATTATGGAAACTTTTGGCTAATTTTATCTAAGAACGGGTACTTGACAGAAAGGGATACTTTGCATGGAAATTAGCCTAAAGTTTATCTAGTCAAAGTATTTTTGCAATCAATTTCAATTTTATCTTAATTTAGAATTTTTAAAACCAAATTCAATTTGATTTTAGATTGGATTTTTCAAAACACTCTCAAATTGGCTTTACTTTTGGCATTAACATTTTAATTTTTCTTTCAAATTGGATTTTATATTAAAATCTTCAAATCAATTTCAATTTGGTTTTAATTTGGAATTTTAATTTGAATTTGAATTTTGTTTTAAATGACTTAAATTTAAAATGTCCAAATAAATTTTAAAATGGCTTTTAAACTAAGATTTCCAATTAAATTTTAATTTAATTTTGATTCGAATTTCTAAATGATTTTTAATTTCTTTTAGTTGGTTTTAACTTTTAATTTGGTAATTTCTAATCAATTTCTAATTGGATTTGATTTTTTTATTTTGTTTTTTTTAAAAAAAAGAGGTTTCTTTTTCGTTGAATGGTGTTATGTCACTCATAATTATTAATTCATATTTTATCTCTAAAATGTGAAGTAATAAACATGGGACAAGAATAACTCATGTAAAACCTATGATGGAGTTGAGATAATTTCTCAAAATTTTGAGGTAATAAATTGTCTTTTTATTAAAAGAAAATTTCAACATGATAACTCAATTATTAGGAATAACCTCACTCGTCATATCATACCCATACTTTATTTTTAAAGTTAAGGTAAGATCAAGTGAGACATCTATTTCATTTATTTATTTTTCTTTAATTTCTTCAAAATAAAGGACTATTTTATGTTATAAAAGGATAATCTAAAATGTTTCAAAAAAAAAAAAAAAAAAAGGATAATCTTAAAATAAAATGTGGTAACCGTTTTTAAATGGGTGTTGTAGGGATGCTAACACCTTCCCTACATTCAATCGACTCCCGAGCCTAATTTTTGGTTTTCAAAGACCGGTTTTTTCTTTAAAATGGGCAATCAATCACACCCCAAGATGATTGGTGTTAGCTCCAAATCTTTCCTCTCGAAAAAGACCGTTAGGGAAGGACGTCGGTCGCTTTGCATCGCAATGACATTGCGGCAAATACTTATGGAATCCAAGGAATGTAATATTCTTTGAGAATGTATTTCCTCATAACATGTCATGTGAGACAAGTTCACACAAACGACCTCTCGGCATATTGATTAGTGAAACTCCAAGAAAATCGAATATTGAGTTGAATAAAGAACAGGAGCTTAGGCAAAGTAAAAGAATGAGGATCTCAAAGTTTTTTGGGCCTGATTTCTTAACATATTTGTTAAAAAATGAACCCCAAACATTTAAAGAAGCTATTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAAACAAATTGTATACTTGTTTCAATAAAGTGTTATTTCTACAATAAAGTGTTATTGTTAAATATTGCACAATTTGATCCAAATTCAATAAACTAAAATCCAAGGTTGTTTGTATGTATCTTGAACTAGTATGTGGGGACATACGGGGATCGATGTTCAAGTAACAACCGAAAAGATCTATAGTACAAGGATAAGGTTGGGTACCTGATCCTTATAACACTATGTGATACGACCCGCTTTGTATTTACAGACGTATTGATCCAAAGCGTCCACATAGTAGACATGCGAGCGGGGGTATCCTATGCAATGAGTTTGCATAAGACCAGACCATGAAATAGTAAACCACTAGATATAACACCGTTAACTAGTTAGGTTACTATTTCAATAGGATGACCTAGGTAACTCAGTCTTAATACTGAGTGTGTCATGAACTCCTTCTCATGAGGGATTGTCCTTTGATTAGCATTGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAATGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCATTTCTAGGAGAAGTAGATTGAGTGTTCCCTTAAATGGTGACTCCGGGACTTGAACAAAGAGATCCCGCCCTCTCACTCGTCCGAGAGGGACTTTCCGTTTAATGGTTGGACCATAAACAGGTTGTTCATTAGAGGAACATTGGTACTTAAGGAGATAGATGTAACACAGGGGTAAAACGGTAATTTGACCCAACTGTGATTACGGACACTCGTGAAGGATTGACTTACCGGTATAGGTTTATATTCGTGGACAAAAAAATGTTCTACAGTGAGAAGAGTTCAGCTGTGGGTCTTTAGTGGAATGACCCACAGTTAATGAATATTGGTTAATGTGATTAATGAGTTTAATCAGTTAACCTCATATTATTGGAGCTTCTAATCTGTAGGTCCATTAGGTCCCCTTGCTAGCTCGTAAAGAGTAATTAGGAACAATTATTTCTTGAGAGAATTTGAATAGTTCAAATTCATATTGAGAATTAAGTTAATTGTATGAGATACAAATTAATATAATGTATAGTGATACATTAAAATATAAAGTCTAATTTGAAATTAAACTTTATTATTATGAGAGAAATAAATATTTGAAGAAGTTCAAATATTAATATGAATTTGATTCATATTAGATTTATAGGATATAAGAGAATTTGAAGAATTTGAAGGAGTTCAAATTTTAATATGAATTTGATTCATATTATAGAATTAATTAATTGAAGACCTGAAATTAAATATGTGATATTTAATTGGGTAATTAATTAATTAACTAATAGAAGGTCTGAAATTAAATATATGATATTTAATTGGTAATTAATTAATTAATTGGAAATTAATCAATTATGGAAATGATTAATCACTTGTGGAGGTAATTAATCACTTATGGAAATGATTTAATCACTTATGGAAGTGATCAATCATTTATGAAAAAGTTTAATCAATTATGGAATTGATTGGTTATGGAATTGGTTAATTATGAAAAAGATTAAATCATTTATGGAAATAATTGATTTTAAATGAATATTTTATTCATGGCCTTTCTCCTACAAATAGAACACTAAACCTAGGGTTTAGGTGATACATCATCATTAGATCACAAGAATGCACTCTTGCATTCTCTCTAGTCTCCCTCTCATATTCTCTCAACCCAATAACTCTAGGGAGAATTTTCTCTCTAGAGTTTTTCCCATTCAAGATTAGGTAGTCCCACAACTACGTTCCTAATCTCAGAGTCATAGTGGGGAAGATCAATTGGTGGTGTCCCAATTGTTGACACTCGGTCCCTATGAAATCAAGAAAGGCGTTCTTGATATTTCAGAGACAACAACGACGGTATGTTTGCTTCTCCCCTTTAGATTAGGTTCTAAGGTTGTATGCTTAGCCTTGATAATTGATTTAGAATAGTTTTCTAAATTTTGCCAATGTATTGGTATTTTGGTAGAAACAATATTAACTACGAAACGGTCCAATTGCGCTTCCGCTAACGGAATTGGGGAATTCCAATCCTTCAGCTATATCCTTTCTAGAAGCTCCATGTTGAAAAGAAGCTATTTATAGTGAAATTGAGTCCATGCAAAATCACACTTGGGAACTAGTCCATCTTTCATCAAGAAGTAAAGTATTTTGGTGTAAGTGGATTTTTAAAAGAAAACTAAAGGCAGATGGATCAATCGATAAATATAAAGCTAGACTTGTAGTTAAAGGATACAAGCAACAAGAAGGCCTTGATTTTTATTTTGACACACTTACTCACTAGTTACTAGAATCACTTCCATTCTTGTCTTAATAGTAACATCAGATTTGAACTGACTTGAGATACATCAGATGGATATAAAGACAACATTTTTAAATGGTGAGTTAGATGAAGAAATCTACATACAACCTGAAGGGTTTGTTGCCCCAAGTCAAGAAACAAAAGTTTGCAAATTAGTAAAGTTTCTTTATGGATTAAAATAGTCACCAGAACAATGACATGACAAATTTGACAATGCAATGCTCGACAATGGGTTTAAAATTAATGAATGTGACAAATGTGTAAATGTCAAAAGTGATTGAAATGACCATGTTATTGTGTTTTTGTATGTTGATGGTATGCTAATTATTGGTAGCAACATCAATATTATTCAGACTACTAAACAAATGTTGGCCAATAAGTTTATGATGAAAGATATGGGTGTCTTAGAGATGTCATTCTAGGAATTAAAATTTCTAGAACCCCACAAGGATTAGTATTGTCTCATTCACATTATATTGATAAAATATTTGAAAATTTTCAAAAGTATGACACTGGGATAATTAAAACTCATAGACACTGTTCTCCATTTAGCTAAAAATAATGGAGATAGTATAACACAACTAGAGTATTCTCACGTAATTGGCAGTTTAATTTACATCATGAGTTGTACACGTCCAGATAGGGGTGTTCATCGGTCGGCCAGAGTCGGTTTTGGGTGAAAACCAACCTATCAGTTTCAGTCGGTCGGTGGTCGGTGATTTTTAGGTGATTCATGAAACCAATCGATTGAATACACGATCGGTCGATTGATTTTGTCAGTTTTGAGATGTTGCCAGAAAACCATTTTTCTCCTTTCTTCTTCTTCACCACCGATTTCGTCGATTTTGAGATGTTGTCTTGTCGAACTGCAAAGAGAATAAGAGAAATAGAAAATGAGAACGGAGAGATTTAAAGCTTGGTGAGGGAGAAAATATGGAAAGGGAAGAAAAACAAAAGCTTAAATGAGGAAGAAGAAATGAGAAGAAAGAAAAGGAAAGATAAGAGAAACTAAAAGAAAGAAGGAAAAATGGGTTGGTGGTGAAGAAGTTGGAAGGAGAAGAGAAAAAGAGAGAAAGAGAAGAGAAAATATGGAAAAAAAAAATAAAAAGAAAAAGAAAGGAATCGTGGAAAAGAAGAAGAGTAGAGAAAAAAGAGGAAAAGGGAGAGATCTGGGGAAAAGACAAAAAAGAAAGTATAAAGAGATAAAATAATATATTTTTTGAAAAGGTCATCATAACCTCTTTTAATGGGAAATAACAGAACATGCACTGCACTGTGTGTAGTGTAAAATGCAGCTGGTTGCCTTGGTATTCATTCTGACTTCTACTCGATTTTTTTTTAATTTTTTTTAATTTGAGATTAAAGTGGTTGGTCGGTCGGCTTTTACTATTTTTAAAGGACCGATCGACCGAAAATCAGTTTTTCAATAGAAAAAACCAACTCCAATCAAGTATAAGAGAAAACCGACCAATCGACGTTGGTTCGGTCGGTTTCAATCGACCAGGTCGGTTTTCGATCTAATTTTGAACACCCCTACGTCCAGATATATCATATGTTGTAAGCAAGTTAAGTAATTTATACGAGCAATCCAAGTCAAGATCATTGGAAAACTATATTGAGAATTTTAGGATACCTAAAGTACACAAAAAATTAAGGACTACATTATATTAGATATCATGTTGTGCTTCAAAGATTATTGTGATGCCAATTGAATATCTAGTCCTAAAGACTCAAAATCCACGAGTGGTTTACATTTTCACTCTTGGAGGTGGAGATATGTCTTGGAAATCTTCCAAACAAATGTGTATAGCATGATCCGTAATGGAATCTGAATTTATAGCTCTGGACAAAGCCGGAGAAGAAACATGATGACTTCGAATTTTTTTGGAAAATATTCCAAATTGATCTAAGCCAATGCCTGTAATATGCATACATAGTGATAGCCAAGTAGCTATTGGAAGGGCACAAAATATTATTATGATGGTAAATCTCAACATATATGATGAAGACATAAATACAATCAGACATTTTCTTTCTAGTGGGCTTATCACAATTGAATTTTTAAAGTCAAAAGATAATAGCTGATCCATTTACAAAAGGCCTAGGTTGAAAACTGATCAAGGAGAATTAGATTAAAGCCTATATCTAAAAGTTGACCAGAGAGGCAATCCAACTTAATTGACTAAAGATTTCAAGATCTAGGTTCAATGGGCAAACCGATCTCTTCATAACTTGATGAGCATCATGTTGAAATTTTCTCTTACACATTCTAAGGATGAGACAGTGCACATGTGGTTTTAGGGTAAGCATTATGATTTTAATGATTTTTATATGTGGTTTAATTATTTGTGAAAAGAGCATATATACGATGTTTTTTATAGGAATATCCCCTATGTGAGTGTGAAGGGACCGCTTCTATGAGAATTTTAGAAGACGAATTCTCTAAAACACTCGTGAAACTAGGTGGGGTTCAAGGCCAAAATGAACCACAATCATGAGAACATAAACTTTGTTATGATGAAAAATTGTGTGACTTCTATTGACTTAGTTTACTGGACCGGTTAACAGTTCAAGACATCAAGTTCACTGATTAATCAAGTAAACTCTATTGATGTTCACTAGGGAAAGTTCAAAGCTTTTTACTACTTATCTTGATACATTCTTCATTGGGAAAAAGGTCTGGACTTTTATTTTAATCTTCACATTCTTATCTCAAGAGAACAACCTACCATTTATAGGAGGATTGTTGGAATAAATGGTATGTGACTCTTCCATGAGTTGCATCGTTTCACATCCATGTGTTGTAACTCTTCCATGAGTTGTATCTTTCAATATCCATGGGTTGCGTTCTTTCATCCAATGATCAAGTCTTTTCACCTTTTTCAAAATTGATAACAAATTTGAAGAAGAGTCATGACTATTGAAATGGCCACAAATTAGTCTGTAAATATGTCTCTTCTCCAAATTGGAAGATATGAGTTTCCATACAAGTTTCCATAGACTTTTCATACACTTTTCTCCCATCAAATTTTGTTGAAGTTTCGTTTGCTCCACAAAACAACATTCATTGGATATGGTGTTGCTTCCATAAGAAGGTAATTTGATCTATCTTGGGAGACAATTACTCATTAAACTCAAGAACTAGAGTAAGTAAAATTGCCCTAAGGAGACAATGTGAATTCATTGAGTTCAGATTCTCTTTTGTTTACAAATTTAGTAATTGCAATACTATCATCTTTTTTTATGTGATATTCATATGCACACACTACTACAAATTTGGCATTTATTGACACGTGACCTTTTTGTTTAGGTACATACTACAATGATGATGATGATGATGATGATGATGAGGATGAGAATATTGAACATGAGCGTATGGATGAACAAGTTGAAGCTCGATGTGAAAGCAATTAAAAGAATAATGTTTTACTACAAATATCTAGAACTCTCAATAGAATAATGCTTGTGAAGGGATTGAATCCCACAGTGGAAGCGCGTGTGATCACATATGTTTCA

mRNA sequence

ATGTCTTCCAAGATTATCTTTCTTGTGCTTCTGGGTGCTTTTGTCTGCACCACTTCTGTGGCTCGCGTGCTGAACTGCACCATTTCTGCCTCTAGTGATGATGGGGACATTTACAAGCTGATGAATGCCTCTTTACAATTTGATCCCCAATTTGGTGGTGGTATGAATTTTAGTGCTGGTTATGGTTCGGGTTATGCCGGTGGTATGGCTACTGGTGCTGTTTATGGTCCGGCTTTTGGAAATTATGGTGCGGGCTATGGTGGTGGTATGAATCCTAGTACTGGTGCTGGTGCTCGTGTTCCTCCTATTGGTACTGCTGGTATTGGTGGGGGTCGTCCTGTTGGTTTTGGTGCGAACGTTGGCGCGGGGGTAGGTGGTGGTGGTGGTTCGGGTACATACTACAATGATGATGATGATGATGATGATGATGAGGATGAGAATATTGAACATGAGCGTATGGATGAACAAGTTGAAGCTCGATGTGAAAGCAATTAA

Coding sequence (CDS)

ATGTCTTCCAAGATTATCTTTCTTGTGCTTCTGGGTGCTTTTGTCTGCACCACTTCTGTGGCTCGCGTGCTGAACTGCACCATTTCTGCCTCTAGTGATGATGGGGACATTTACAAGCTGATGAATGCCTCTTTACAATTTGATCCCCAATTTGGTGGTGGTATGAATTTTAGTGCTGGTTATGGTTCGGGTTATGCCGGTGGTATGGCTACTGGTGCTGTTTATGGTCCGGCTTTTGGAAATTATGGTGCGGGCTATGGTGGTGGTATGAATCCTAGTACTGGTGCTGGTGCTCGTGTTCCTCCTATTGGTACTGCTGGTATTGGTGGGGGTCGTCCTGTTGGTTTTGGTGCGAACGTTGGCGCGGGGGTAGGTGGTGGTGGTGGTTCGGGTACATACTACAATGATGATGATGATGATGATGATGATGAGGATGAGAATATTGAACATGAGCGTATGGATGAACAAGTTGAAGCTCGATGTGAAAGCAATTAA

Protein sequence

MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVPPIGTAGIGGGRPVGFGANVGAGVGGGGGSGTYYNDDDDDDDDEDENIEHERMDEQVEARCESN

Homology

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BLAST of Spg027518 vs. NCBI nr
Match: XP_024437755.1 (glycine-rich protein 23-like [Populus trichocarpa] >PNT52256.1 hypothetical protein POPTR_001G021300 [Populus trichocarpa])

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-04
Identity = 48/131 (36.64%), Postives = 67/131 (51.15%), Query Frame = 0


Query: 1   MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAG 60
           M+SK++ L+L  A VC+TS  +++     +  D+ +++          P FGGG     G
Sbjct: 1   MASKLLLLLLFSALVCSTSARKLVGTEKGSFEDEKNLF--------HRPGFGGGAGGGGG 60

Query: 61  YGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVPPIGTAGIGGGRPVGFGANV 120
           +G G  GG+  GA +G   G  G G GGG+    G G      G  G+GGG   GFG   
Sbjct: 61  FGGGGGGGLGGGAGFG---GGAGGGAGGGLGGGAGGGGGFGGGGGGGVGGGAGGGFGGGA 120

Query: 121 GAGVGGGGGSG 132
           GAG G GGG+G
Sbjct: 121 GAGGGLGGGAG 120

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BLAST of Spg027518 vs. NCBI nr
Match: KAF9864480.1 (hypothetical protein H0E87_024073 [Populus deltoides])

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-04
Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = 0


Query: 1   MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAG 60
           M+SK++ ++L  A VC+TS  +++     +  D+ +++          P FGGG     G
Sbjct: 1   MASKLLLVLLFSALVCSTSARKLVGTEKGSFEDEKNLF--------HRPGFGGGAGGGGG 60

Query: 61  YGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVPPIGTAGIGGGRPVGFGANV 120
           +G G  GG+  GA +G   G  G G GGG+    G G      G  G+GGG   GFG   
Sbjct: 61  FGGGAGGGLGGGAGFG---GGAGGGAGGGLGGGAGGGGGFGGGGGGGVGGGAGGGFGGGA 120

Query: 121 GAGVGGGGGSG 132
           GAG G GGG+G
Sbjct: 121 GAGGGLGGGAG 120

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BLAST of Spg027518 vs. NCBI nr
Match: KAA0065824.1 (glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa] >TYJ96563.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-04
Identity = 57/132 (43.18%), Postives = 69/132 (52.27%), Query Frame = 0


Query: 1   MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQF-GGGMNFSA 60
           M+SKI+FLV LGAF+ +TS AR L+   +AS  D   +          P+F GGG+    
Sbjct: 1   MASKIVFLVFLGAFLFSTSGARKLS---TASFQDEKFF--------HRPRFGGGGLGGGG 60

Query: 61  GYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVPPIGTAGIGGGRPVGFGAN 120
           G G G  GG   G   G  FG  G+G+GGG+    G G      G  GIGGG   G GA 
Sbjct: 61  GGGFGGGGGGGLGGGSGGGFGG-GSGFGGGVGGGAGGGGGFGGGGGGGIGGGSGFGGGAG 120

Query: 121 VGAGVGGGGGSG 132
            G G GGGGG G
Sbjct: 121 FGGGSGGGGGLG 120

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BLAST of Spg027518 vs. NCBI nr
Match: KAG6787685.1 (hypothetical protein POTOM_003728 [Populus tomentosa])

HSP 1 Score: 56.2 bits (134), Expect = 3.0e-04
Identity = 46/131 (35.11%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 1   MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAG 60
           M+SK++  +L  A VC+TS  +++     +  D+ +++          P FGGG     G
Sbjct: 1   MASKLLLFLLFSALVCSTSARKLVGTEKGSFEDEKNLF--------HRPGFGGGAGGGGG 60

Query: 61  YGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVPPIGTAGIGGGRPVGFGANV 120
           +G G  GG+  GA +G   G  G G GGG+    G G      G  G+GGG   GFG   
Sbjct: 61  FGGGGGGGLGGGAGFG---GGAGGGAGGGLGGGAGGGGGFGGGGGGGVGGGAGGGFGGGA 120

Query: 121 GAGVGGGGGSG 132
           GAG G G G G
Sbjct: 121 GAGAGAGAGGG 120

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BLAST of Spg027518 vs. NCBI nr
Match: KZV56398.1 (glycine-rich cell wall structural protein 1-like [Dorcoceras hygrometricum])

HSP 1 Score: 55.8 bits (133), Expect = 4.0e-04
Identity = 51/131 (38.93%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 1   MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAG 60
           M+SK + ++LLGA VCT + AR L     A S     ++         P FGGG+    G
Sbjct: 1   MASKFLLILLLGALVCTGTTARHL-----AESKGSFQFEDEKTYFPGRPGFGGGLGGGGG 60

Query: 61  YGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVPPIGTAGIGGGRPVGFGANV 120
            G G  GG+  G+ YG   G +G G GGG+    G G      G  G+GGG   GFG   
Sbjct: 61  LGGGGGGGLGGGSGYGAGAG-FGGGSGGGLGGGAGGGGGFGGGGGGGLGGGS--GFGGGA 120

Query: 121 GAGVGGGGGSG 132
           G G+GGG G G
Sbjct: 121 GGGLGGGSGLG 123

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BLAST of Spg027518 vs. ExPASy TrEMBL
Match: A0A2K2BR58 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G021300 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 5.0e-05
Identity = 48/131 (36.64%), Postives = 67/131 (51.15%), Query Frame = 0


Query: 1   MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAG 60
           M+SK++ L+L  A VC+TS  +++     +  D+ +++          P FGGG     G
Sbjct: 1   MASKLLLLLLFSALVCSTSARKLVGTEKGSFEDEKNLF--------HRPGFGGGAGGGGG 60

Query: 61  YGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVPPIGTAGIGGGRPVGFGANV 120
           +G G  GG+  GA +G   G  G G GGG+    G G      G  G+GGG   GFG   
Sbjct: 61  FGGGGGGGLGGGAGFG---GGAGGGAGGGLGGGAGGGGGFGGGGGGGVGGGAGGGFGGGA 120

Query: 121 GAGVGGGGGSG 132
           GAG G GGG+G
Sbjct: 121 GAGGGLGGGAG 120

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BLAST of Spg027518 vs. ExPASy TrEMBL
Match: A0A5D3BB90 (Glycine-rich cell wall structural protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002250 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-04
Identity = 57/132 (43.18%), Postives = 69/132 (52.27%), Query Frame = 0


Query: 1   MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQF-GGGMNFSA 60
           M+SKI+FLV LGAF+ +TS AR L+   +AS  D   +          P+F GGG+    
Sbjct: 1   MASKIVFLVFLGAFLFSTSGARKLS---TASFQDEKFF--------HRPRFGGGGLGGGG 60

Query: 61  GYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVPPIGTAGIGGGRPVGFGAN 120
           G G G  GG   G   G  FG  G+G+GGG+    G G      G  GIGGG   G GA 
Sbjct: 61  GGGFGGGGGGGLGGGSGGGFGG-GSGFGGGVGGGAGGGGGFGGGGGGGIGGGSGFGGGAG 120

Query: 121 VGAGVGGGGGSG 132
            G G GGGGG G
Sbjct: 121 FGGGSGGGGGLG 120

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BLAST of Spg027518 vs. ExPASy TrEMBL
Match: A0A6J1AP12 (glycine-rich protein 23 OS=Herrania umbratica OX=108875 GN=LOC110419504 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.3e-04
Identity = 52/130 (40.00%), Postives = 66/130 (50.77%), Query Frame = 0


Query: 2   SSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGY 61
           SSK++F++ LGA VC +S AR L    S   D+ +++          P+FGGG+    G 
Sbjct: 3   SSKLLFVLFLGALVCASSTARKLT---SGFEDEKNLF--------HRPRFGGGLGGGGGG 62

Query: 62  GSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVPPIGTAGIGGGRPVGFGANVG 121
           G G  GG+  GA  G  FG  GAG GGG+    G G      G  G GGG  +G G   G
Sbjct: 63  GLGGGGGLGAGAGGGAGFGG-GAGAGGGLGGGGGLGGG----GGGGFGGGGGLGGGGGFG 116

Query: 122 AGVGGGGGSG 132
            G GGG G G
Sbjct: 123 GGAGGGFGGG 116

[Close]

BLAST of Spg027518 vs. ExPASy TrEMBL
Match: A0A7J0HFY1 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_29g0011510 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.6e-04
Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 1   MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAG 60
           M+SK + LVLLGA VCTTS  ++++ T ++  ++           +F  + GGG+    G
Sbjct: 1   MTSKFLLLVLLGALVCTTSSRKLVSTTENSFEEE-----------KFFHRGGGGLGGGFG 60

Query: 61  YGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVPPIGTAGIGGGRPVGFGANV 120
            G G   G+  G+ +G   G  G GYGGG+    G G      G  G+GGG   G+G   
Sbjct: 61  GGGGGGSGLGGGSGFG---GGAGGGYGGGLGGGAGGGEWFGGGGGGGLGGGAGGGYGGGA 113

Query: 121 GAGVGGG 128
           G G+GGG
Sbjct: 121 GGGIGGG 113

[Close]

BLAST of Spg027518 vs. ExPASy TrEMBL
Match: A0A4U5PQT8 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000193770 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 9.5e-04
Identity = 48/132 (36.36%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 1   MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAG 60
           M+SK++ ++L  A VC+TS  +++     +  D+ +++          P FGGG     G
Sbjct: 1   MASKLLLVLLFSALVCSTSARKLVGTEKGSFEDEKNLF--------HRPGFGGGAGGGGG 60

Query: 61  YGSGYAGGM-ATGAVYGPAFGNYGAGYGGGMNPSTGAGARVPPIGTAGIGGGRPVGFGAN 120
           +G G  GG+ A GA +G   G  G G GGG+    G G      G  G+GGG   GFG  
Sbjct: 61  FGGGGGGGLGAGGAGFG---GGAGGGAGGGLGGGAGGGGGFGGGGGGGVGGGAGGGFGGG 120

Query: 121 VGAGVGGGGGSG 132
            GAG G GGG+G
Sbjct: 121 AGAGGGLGGGAG 121

The following BLAST results are available for this feature:

BLAST of Spg027518 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_024437755.1	1.0e-04	36.64	glycine-rich protein 23-like [Populus trichocarpa] >PNT52256.1 hypothetical prot...	[more]
KAF9864480.1	1.8e-04	35.88	hypothetical protein H0E87_024073 [Populus deltoides]	[more]
KAA0065824.1	2.3e-04	43.18	glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa] >TYJ96...	[more]
KAG6787685.1	3.0e-04	35.11	hypothetical protein POTOM_003728 [Populus tomentosa]	[more]
KZV56398.1	4.0e-04	38.93	glycine-rich cell wall structural protein 1-like [Dorcoceras hygrometricum]	[more]

BLAST of Spg027518 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg027518 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2K2BR58	5.0e-05	36.64	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G021300 PE=4 ...	[more]
A0A5D3BB90	1.1e-04	43.18	Glycine-rich cell wall structural protein-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1AP12	4.3e-04	40.00	glycine-rich protein 23 OS=Herrania umbratica OX=108875 GN=LOC110419504 PE=4 SV=...	[more]
A0A7J0HFY1	5.6e-04	36.22	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_29g0011510 PE=4 SV=1	[more]
A0A4U5PQT8	9.5e-04	36.36	Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000193770 PE=4 SV=1	[more]

BLAST of Spg027518 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg027518.1	Spg027518.1	mRNA