Spg027325 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg027325
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold7: 43736829 .. 43740370 (-)
RNA-Seq ExpressionSpg027325
SyntenySpg027325
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAAATGAGAGGAAGAAGGGAAAGAGACAATGAGGAAGAAGAGGTACCAGTTACCCCTGAAGTACCGAAGATGAAAGCAAAGAAAAAGAAAATGCCGAAGGAAAAGGAAGCTAAAAGAAGGAAAAGACAACAGAAGGCTGAGGTTGATGAGGTAGTACAACAGGCAGTAGAAGATATTGCTGAGGTGGTTGTTGAAGAGAATCCAAAGAAACCTGAGGAACAAAATCCTAGACAAACTGAGCCGACAGTCGGAAATTCGCAAGAAATTCAAGAAAAACGAGCAGAGGATGAGCCAGAGGGAGGAGTTCCACAGGGATTTCAAGAGCAAGAAGCTCGAGTTGAGGTTATTATGCCGGAGGTGCCCCGTCGTAGCCGTCGAAAGCAGAAAGCCGGCCGTGTCAAGGTGGTCCGGACTGATACCCCTTCACCGCCGACAACTGATTCTGAGAAAGAGAATACGGAGAGAAGAACAGGAGAAAACAGAGGAAGAAGACAAAGCGCGAGAAGGAACAGAAAAGAAAATGGAGGAGGAGATTTTGCCCAAATAGATGGAAGATAAGGGCAAAGGTATTGCTGAAGCATCGGCTGAGGCTGAGAATCTTGATGCTGAGGAGCCACGGTTGCCGTACAACCGCTTCATCAATAATCTTGCCCGAGCAAAGTACATACAAATGTTGAAAAGAGACTTTTTGTTTGAGTGGGGATTTGGCGATGATCTGCCGCGTTTCTTGAGAACAGGAATAACAAACCATGGCTGGAGTCAGTTCTGCACAAAGCCGGAGCCGGTCAATTCCAATATTGTCTGAGAATTTTATGCAAATATTGATGATCAAGAGGAATTTCAGGCTATCGTCCGAGGGGTGCCCGTTGACTAGAGCCCAGGAGCTATAAATTCTCTATTCGACCTCCAGGACTTTTCGCACGCAGGATTCAATGAGATGGTGGTGGCGCCATCTAACGATCAGTTAAATGCGGCTGTTCGGGAAGTTGGCAGTGAAGGGGCTTAGTGGAGACTGTCGAAGACAGAAAAGCGTACATTTCAAGCAGCTTACCTGAAGAGGGAAGCCAATACATGGATAGGCTTCATCAAGTTGCGCTTACTGCTGACAACTCACGATTCAACGGTGTCTCGAGATAGGGTACTTCCTGTGTTTGCTATTCTGCATTCCATGAGCATTGATGTGGGCAAAATAATTTCCAATGAGATTTTTGATTGCTGGCGGAAAAAGGTTGGGAAGCTGTTTTTCCCGAACACCATAACAATGTTATGCCAAAGGGCAGGGGTTCCAATGAATGCGAATGATGTCACTCTAATGGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTTCAAAGGACACAGGAAGCACGCCAAGGAGGTTTGGTGTGCGACATCCATCAAATGTAGGAGCAATTACAGATGCATTCCAGCAGGATGGAGTTTGCTGAAAGGCAATTCCAAACCTTTTGGAAGTATGTGAAGATAAGGGATGCCGCGTTGAGGGGGGCCTTGCAATCAAATTTTTCTAAACCATATCCGGTCTTCCCAAAATTCCCTGATGACCTACTGAACCCTTGGATTCCGCCACCGCCTGTCGAGAGAGAATGAGATGAAGAAGAAGATCCTGGTCAGGAGGATTGAAGGAAGAATTGGGCGCGCATTTCTTTTTTATGTAATATTTTTGTTGCTCGCGCATTTCTTACCACATCTTTTTCTGTTTTTCTGTTTATCTTGTTTTGTTTTTTTTGCTTGTTCTTAATTTTTTCTACTGCTGGGTCACTGAAGAAAAAAATATATGTTTGCTAATGTAATTTCTTTCTTTTTAATGAAATTTCCAATAGTATTTCTGTTATATGGCACTGAGTAATTCTAACTTAACTAATTTTCTTCTGAATTTTTGAAGCACGGGCTAGTTAAGCTTAATTAGATCAAGGTATTCTGATCTCCAGAAACCTTTGGCTTGAGCATTTCTTCTAGCCTGGTCGTTGCTGTGTCGAGAAGATTCTGAGGTAGTGTTGACTTATGTGATCCATTTTAAGCTTACTTCTAGTCCCACGCTTAGTTTAAAAATTTAGATAGAAATGTTTAAGTTTGGGGGTATAATTTATCAACTAAATAATTCATTGGGGACAATGAATAATTCAAGTTTGGGGGACTTTTTGCTACTCCAATTGTTTTGCTCGAGCATTCCTCTCCTTCATTAGATAATTTGCTAGGTTATTGAGTAATCAGGGACATTTGTGATACCCACAGTTTGTCTTTGTGTCAAAAGATAACCTAGGAAATGTGAAAAAGGATGAAAAAAAATTATTATTTGCTGAAAAAAAAATCGATTGTGTAATATTTTGCTGAGAAAATTCATGGAGCAAAAGTTTTGAAGGATGAATGATAATCCAGCAGTTTTTCTGTCTCCCAAGACTTAGGTGTGCTTCATCATAAAATGTTACCATTCCGAGGGGCAAGGGATAGAATAACTAAGGATTCTTGAGCATAGCAATGAGTATTTAGCCCAGATGGTGATGAGTTTGAGGCAAGGGTATACTGCACCATAAAGTGGGTCATCCCATGCTTAAGAGCTTATGACTTAGGGCTACTTTAAGTCTGAAGAACAAAAATATAAACCCCTTAAAAATGTGTTTTTATATGTCTGATAATAGAGCTAGGTTGTGGCAAGTTTTTAGAATAAAGTAAAAGGTGGTGATCATTTGTCCATGCTGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAATGCTCAGGTAAAGGTTGAAGGTAGTGTTAGATTATCTGTTTTGATTGAGCTATGCTTTGTCTGATGTTTTGAATTCTTAAGGGAAGGTTGGTTAGTATTGCTCGGGAGACGCAATAGTTCAAGTTTGGGGGTATGATAACTCTCCAAAAGGGAGTGATTTAGACCTTAATTCTATAGTGTTTTGTGTGTTATTTGTGCTAATTATGGTTGCTTTTAGATGATTATTGCATGTTCTAACCCATTTGGAAGAATGGATGCTTTGGAAGTTATTTTGTGCAGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGCGATCCAGGAAAACAGGGAGCAAAACTGCCACGTCAAAGCTCGTTATCCATTTTAATGAATTGAAGTTAGTTAAGCTATTTTCGGATTTAAGGAGCAAGGAGAGCCATCCACGTGTCTAGGTCAACCTAATTTAAGCTTGTCTTCATTCTATAAAAAGGGAAAGGTCGTTCAAGTCAGAGACATTCCACCATTGGGGAAGAGATCATTTCTCATTTCCATCATTGGGAGTCGAATAGAGGAGAAAGATTGGAGACTTCAAGAAGACCATCAATTATGGATTTGACCAAGAGAATTAGTATTTTCTTGTAATTTCTTGTAATTATGGATGCACATACTCAGATTGTAGCGTGTGTTGCGATGAGCTTTATGAACTAAATTTACTTAGGTGTTGGTTTAGAGTAATGTAATTGTTGTCCCTAATTCTCTATGCAATATATGTTGATTTGAGCATCTTGATTA

mRNA sequence

ATGGCAAAAATGAGAGGAAGAAGGGAAAGAGACAATGAGGAAGAAGAGGTACCAGTTACCCCTGAAGTACCGAAGATGAAAGCAAAGAAAAAGAAAATGCCGAAGGAAAAGGAAGCTAAAAGAAGGAAAAGACAACAGAAGGCTGAGGTTGATGAGGTAGTACAACAGGCAGTAGAAGATATTGCTGAGGTGGTTGTTGAAGAGAATCCAAAGAAACCTGAGGAACAAAATCCTAGACAAACTGAGCCGACAGTCGGAAATTCGCAAGAAATTCAAGAAAAACGAGCAGAGGATGAGCCAGAGGGAGGAGTTCCACAGGGATTTCAAGAGCAAGAAGCTCGAGTTGAGGTTATTATGCCGGAGGTGCCCCGTCGTAGCCGTCGAAAGCAGAAAGCCGGCCGTGTCAAGATGGAAGATAAGGGCAAAGGTATTGCTGAAGCATCGGCTGAGGCTGAGAATCTTGATGCTGAGGAGCCACGGTTGCCGTACAACCGCTTCATCAATAATCTTGCCCGAGCAAAGTACATACAAATGTTGAAAAGAGACTTTTTGTTTGAGTGGGGATTTGGCGATGATCTGCCGCGTTTCTTGAGAACAGGAATAACAAACCATGGCTGGAAAAAGCGTACATTTCAAGCAGCTTACCTGAAGAGGGAAGCCAATACATGGATAGGCTTCATCAAGTTGCGCTTACTGCTGACAACTCACGATTCAACGGTGTCTCGAGATAGGGTACTTCCTGTGTTTGCTATTCTGCATTCCATGAGCATTGATGTGGGCAAAATAATTTCCAATGAGATTTTTGATTGCTGGCGGAAAAAGGTTGGGAAGCTGTTTTTCCCGAACACCATAACAATGTTATGCCAAAGGGCAGGGGTTCCAATGAATGCGAATGATGTCACTCTAATGGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTTCAAAGGACACAGGAAGCACGCCAAGGAGCAGAGCTTGGTTTTGCAGAATGCTCAGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGCGATCCAGGAAAACAGGGAGCAAAACTGCCACGTCAAAGCTCGTTATCCATTTTAA

Coding sequence (CDS)

ATGGCAAAAATGAGAGGAAGAAGGGAAAGAGACAATGAGGAAGAAGAGGTACCAGTTACCCCTGAAGTACCGAAGATGAAAGCAAAGAAAAAGAAAATGCCGAAGGAAAAGGAAGCTAAAAGAAGGAAAAGACAACAGAAGGCTGAGGTTGATGAGGTAGTACAACAGGCAGTAGAAGATATTGCTGAGGTGGTTGTTGAAGAGAATCCAAAGAAACCTGAGGAACAAAATCCTAGACAAACTGAGCCGACAGTCGGAAATTCGCAAGAAATTCAAGAAAAACGAGCAGAGGATGAGCCAGAGGGAGGAGTTCCACAGGGATTTCAAGAGCAAGAAGCTCGAGTTGAGGTTATTATGCCGGAGGTGCCCCGTCGTAGCCGTCGAAAGCAGAAAGCCGGCCGTGTCAAGATGGAAGATAAGGGCAAAGGTATTGCTGAAGCATCGGCTGAGGCTGAGAATCTTGATGCTGAGGAGCCACGGTTGCCGTACAACCGCTTCATCAATAATCTTGCCCGAGCAAAGTACATACAAATGTTGAAAAGAGACTTTTTGTTTGAGTGGGGATTTGGCGATGATCTGCCGCGTTTCTTGAGAACAGGAATAACAAACCATGGCTGGAAAAAGCGTACATTTCAAGCAGCTTACCTGAAGAGGGAAGCCAATACATGGATAGGCTTCATCAAGTTGCGCTTACTGCTGACAACTCACGATTCAACGGTGTCTCGAGATAGGGTACTTCCTGTGTTTGCTATTCTGCATTCCATGAGCATTGATGTGGGCAAAATAATTTCCAATGAGATTTTTGATTGCTGGCGGAAAAAGGTTGGGAAGCTGTTTTTCCCGAACACCATAACAATGTTATGCCAAAGGGCAGGGGTTCCAATGAATGCGAATGATGTCACTCTAATGGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTTCAAAGGACACAGGAAGCACGCCAAGGAGCAGAGCTTGGTTTTGCAGAATGCTCAGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGCGATCCAGGAAAACAGGGAGCAAAACTGCCACGTCAAAGCTCGTTATCCATTTTAA

Protein sequence

MAKMRGRRERDNEEEEVPVTPEVPKMKAKKKKMPKEKEAKRRKRQQKAEVDEVVQQAVEDIAEVVVEENPKKPEEQNPRQTEPTVGNSQEIQEKRAEDEPEGGVPQGFQEQEARVEVIMPEVPRRSRRKQKAGRVKMEDKGKGIAEASAEAENLDAEEPRLPYNRFINNLARAKYIQMLKRDFLFEWGFGDDLPRFLRTGITNHGWKKRTFQAAYLKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRTQEARQGAELGFAECSEYIAERLEGAKSAIQENREQNCHVKARYPF
Homology
[Close]
BLAST of Spg027325 vs. NCBI nr
Match: XP_024971944.1 (uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus])

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-14
Identity = 51/151 (33.77%), Postives = 86/151 (56.95%), Query Frame = 0 

Query: 209 RTFQAAYLKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIF 268
           RT++A+ LK  AN WI FI+  L  TTHDS++S ++++ ++ ++   +I+VGK++   I 
Sbjct: 326 RTYRASNLKPNANVWINFIRYSLNPTTHDSSISVEKIILLYCVVTGRTINVGKVVEKAIL 385

Query: 269 DCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLM---DKGIIDTPNLARLQRTQEARQG 328
            C +++ GKLFFP+ I  L  +AGVP   +D+ +    +K  ID   +++L+   E  +G
Sbjct: 386 YCSKRRQGKLFFPSLIHKLLMQAGVPEYTDDLVIKECEEKWTIDMKAVSKLRERSE--RG 445

Query: 329 AELGFAECSEYIAERLEGAKSAIQENREQNC 357
            E             L G   A++E  EQ+C
Sbjct: 446 RE-------------LPGVTRAMEELLEQSC 461

[Close]
BLAST of Spg027325 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 86.3 bits (212), Expect = 6.1e-13
Identity = 47/104 (45.19%), Postives = 65/104 (62.50%), Query Frame = 0 

Query: 220 ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLF 279
           A  W  F+K RLL TTH  TVS+DR+L ++++L   SI+VG++I +EI  C  +K G LF
Sbjct: 45  AKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALF 104

Query: 280 FPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRTQEAR 324
           FP+ IT LC+ A  P   N+  L   G ID   +AR+  TQE +
Sbjct: 105 FPSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARI--TQEGQ 146

[Close]
BLAST of Spg027325 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-12
Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 0 

Query: 220 ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLF 279
           A  W  F+K RLL TTH  TVS+DR+L + ++L   SI+VG++I +EI  C  +K G LF
Sbjct: 174 AKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALF 233

Query: 280 FPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQR---TQEARQGAELGFAECSEY 339
           FP+ IT LC+ A  P   N+  L + G ID   +AR+ +   T+  +Q +    A  S  
Sbjct: 234 FPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSN 293

Query: 340 -----IAERLEGAKSAIQENREQNCHV 359
                I ++L+  +  + +   Q  H+
Sbjct: 294 RTNGDILQQLKALEQRLSQQEVQQYHM 320

[Close]
BLAST of Spg027325 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-12
Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = 0 

Query: 220 ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLF 279
           A  W  F+K  LL TTH  TVS+DR+L + ++L   SI+VG++I +EI  C  +K G LF
Sbjct: 165 AKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALF 224

Query: 280 FPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRTQE 322
           FP+ IT LC+ A  P   N+  L + G ID   +AR+  TQE
Sbjct: 225 FPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARI--TQE 264

[Close]
BLAST of Spg027325 vs. NCBI nr
Match: TYG52543.1 (hypothetical protein ES288_D09G036700v1 [Gossypium darwinii])

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-11
Identity = 49/128 (38.28%), Postives = 71/128 (55.47%), Query Frame = 0 

Query: 201 ITNHGWKKRTFQAAYLKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVG 260
           I N+G    + Q  YLK  A  W  F++   +  +H ST+S + +L ++AIL   SI+VG
Sbjct: 124 IRNYG--SHSCQREYLKPVAKVWFYFVRYSFMPISHSSTISMEWMLLLYAILTEKSINVG 183

Query: 261 KIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARL-QRT 320
           KII  EI +C +KK    +FP+ IT LC +A V + AN      +G I   +L RL +R 
Sbjct: 184 KIILKEIQNCAKKKARSAYFPSLITSLCLKAHVKIQANLKGRYVQGCITNYDLERLVERV 243

Query: 321 QEARQGAE 328
            E  QG +
Sbjct: 244 HELNQGKQ 249

[Close]
BLAST of Spg027325 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.9e-13
Identity = 47/104 (45.19%), Postives = 65/104 (62.50%), Query Frame = 0 

Query: 220 ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLF 279
           A  W  F+K RLL TTH  TVS+DR+L ++++L   SI+VG++I +EI  C  +K G LF
Sbjct: 45  AKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALF 104

Query: 280 FPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRTQEAR 324
           FP+ IT LC+ A  P   N+  L   G ID   +AR+  TQE +
Sbjct: 105 FPSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARI--TQEGQ 146

[Close]
BLAST of Spg027325 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.5e-13
Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 0 

Query: 220 ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLF 279
           A  W  F+K RLL TTH  TVS+DR+L + ++L   SI+VG++I +EI  C  +K G LF
Sbjct: 174 AKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALF 233

Query: 280 FPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQR---TQEARQGAELGFAECSEY 339
           FP+ IT LC+ A  P   N+  L + G ID   +AR+ +   T+  +Q +    A  S  
Sbjct: 234 FPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSN 293

Query: 340 -----IAERLEGAKSAIQENREQNCHV 359
                I ++L+  +  + +   Q  H+
Sbjct: 294 RTNGDILQQLKALEQRLSQQEVQQYHM 320

[Close]
BLAST of Spg027325 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12
Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = 0 

Query: 220 ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLF 279
           A  W  F+K  LL TTH  TVS+DR+L + ++L   SI+VG++I +EI  C  +K G LF
Sbjct: 165 AKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALF 224

Query: 280 FPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRTQE 322
           FP+ IT LC+ A  P   N+  L + G ID   +AR+  TQE
Sbjct: 225 FPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARI--TQE 264

[Close]
BLAST of Spg027325 vs. ExPASy TrEMBL
Match: A0A5D2B8V0 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D09G036700v1 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.5e-12
Identity = 49/128 (38.28%), Postives = 71/128 (55.47%), Query Frame = 0 

Query: 201 ITNHGWKKRTFQAAYLKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVG 260
           I N+G    + Q  YLK  A  W  F++   +  +H ST+S + +L ++AIL   SI+VG
Sbjct: 124 IRNYG--SHSCQREYLKPVAKVWFYFVRYSFMPISHSSTISMEWMLLLYAILTEKSINVG 183

Query: 261 KIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARL-QRT 320
           KII  EI +C +KK    +FP+ IT LC +A V + AN      +G I   +L RL +R 
Sbjct: 184 KIILKEIQNCAKKKARSAYFPSLITSLCLKAHVKIQANLKGRYVQGCITNYDLERLVERV 243

Query: 321 QEARQGAE 328
            E  QG +
Sbjct: 244 HELNQGKQ 249

[Close]
BLAST of Spg027325 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.2e-12
Identity = 54/143 (37.76%), Postives = 75/143 (52.45%), Query Frame = 0 

Query: 216 LKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKV 275
           L   A  W  F+K RLL TTH  TVS++RVL ++++L   SI+VG+II  EI     +K 
Sbjct: 77  LNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSINVGQIIHREICAYAARKS 136

Query: 276 GKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRTQEA----RQGAELGFA 335
           G LFFP+ IT +C  A  P   N+  L + G ID   +AR+ +   A    R  +    A
Sbjct: 137 GALFFPSLITRMCCNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAEHSHRPSSSRPAA 196

Query: 336 ECSEYIAERLEGAKSAIQENREQ 355
             S   +E L+  KS  Q   +Q
Sbjct: 197 ASSSSTSETLQQLKSLEQRISQQ 219

The following BLAST results are available for this feature:
BLAST of Spg027325 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_024971944.13.2e-1433.77uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus][more]
PON59596.16.1e-1345.19hypothetical protein PanWU01x14_158080 [Parasponia andersonii][more]
PON46472.11.4e-1235.37hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
PON35554.12.3e-1245.10hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii][more]
TYG52543.11.1e-1138.28hypothetical protein ES288_D09G036700v1 [Gossypium darwinii][more]
BLAST of Spg027325 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg027325 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5CEY22.9e-1345.19Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... [more]
A0A2P5BCG46.5e-1335.37Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5AGA51.1e-1245.10Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A5D2B8V05.5e-1238.28Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D09G036700v1 PE=... [more]
A0A2P5CPE87.2e-1237.76Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE... [more]
BLAST of Spg027325 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg027325.1Spg027325.1mRNA