Spg027283 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCGATGGAAGAGGGTGAACATCGAGTGGAAGGTGTTTCACCTTCGCAAGATTGGAGATGGGAGGAAAGTGGTTATGGAGGAGAAACATGGGTCAAGAACGAGTCGTCTGGATGTGGACGTGGGTACCTTCGCTTGGATTAGGGACTGTCTTATGGTTGTGTCGAAATCAGAGAACCCAAACGGATTCTGGAGAAGAAGGAAACTAGAGGCAGCGATGATCTTCTTCTAGGTGCTATCTAACAAGAGAGGAAGATTTGGGCTCCTCTCTTTGGAATCAAACAAGGGGAAGAAATCTTCAATCTTCATTCCTGAGGGTCAGAATCGTAGAGGCTGGGGATTGTTGGAGACGGCCATGACTGAAATGCTCCCCCCTCCCAAAGAGTCGAACCGGTTCGATAATGGGTTTCTTAAAAAGAAAGAGAGTTTCGGAGTCCAGATCGACGAAGGGAATAAAAAATCCACCTCCTTTGCGGAAATAGTGAGAAAGGGATCTACGGCAGACATCGAGAGGGATATTTTACCTTCAGAAGTTGGGGAGCTTGCCTTTGACTGTTCTTCGGCGGTCATCATCGAAAGGATTACCGTCGATGTGCAATGGATGGGTATAAGAGAGTCATGCTCAGCAATGGCGAATTTAGGTATCATCCTTAAACCCGTTTGTATTAATCTTGCAGTGGGCCTTTGCGGGAGCAAGAATGAAGCTAAGGAGTTGATCGAGGCGTGTAAGGGGCAGCAACCAGAACACTTCAGCATTCACCCGTGGGATTGCAATATGCTCGTTGAGAGGAAGAGGCTAGCCTTCAAGGGGGTTGGATTACAGCCCTAG ATGGATCGATGGAAGAGGGTGAACATCGAGTGGAAGGTGTTTCACCTTCGCAAGATTGGAGATGGGAGGAAAGTGGTTATGGAGGAGAAACATGGGTCAAGAACGAGTCGTCTGGATGTGGACGTGGGTACCTTCGCTTGGATTAGGGACTGTCTTATGGTGCTATCTAACAAGAGAGGAAGATTTGGGCTCCTCTCTTTGGAATCAAACAAGGGGAAGAAATCTTCAATCTTCATTCCTGAGGGTCAGAATCGTAGAGGCTGGGGATTGTTGGAGACGGCCATGACTGAAATGCTCCCCCCTCCCAAAGAGTCGAACCGGTTCGATAATGGGTTTCTTAAAAAGAAAGAGAGTTTCGGAGTCCAGATCGACGAAGGGAATAAAAAATCCACCTCCTTTGCGGAAATAGTGAGAAAGGGATCTACGGCAGACATCGAGAGGGATATTTTACCTTCAGAAGTTGGGGAGCTTGCCTTTGACTGTTCTTCGGCGGTCATCATCGAAAGGATTACCGTCGATGTGCAATGGATGGGTATAAGAGAGTCATGCTCAGCAATGGCGAATTTAGGTATCATCCTTAAACCCGTTTGTATTAATCTTGCAGTGGGCCTTTGCGGGAGCAAGAATGAAGCTAAGGAGTTGATCGAGGCGTGTAAGGGGCAGCAACCAGAACACTTCAGCATTCACCCGTGGGATTGCAATATGCTCGTTGAGAGGAAGAGGCTAGCCTTCAAGGGGGTTGGATTACAGCCCTAG ATGGATCGATGGAAGAGGGTGAACATCGAGTGGAAGGTGTTTCACCTTCGCAAGATTGGAGATGGGAGGAAAGTGGTTATGGAGGAGAAACATGGGTCAAGAACGAGTCGTCTGGATGTGGACGTGGGTACCTTCGCTTGGATTAGGGACTGTCTTATGGTGCTATCTAACAAGAGAGGAAGATTTGGGCTCCTCTCTTTGGAATCAAACAAGGGGAAGAAATCTTCAATCTTCATTCCTGAGGGTCAGAATCGTAGAGGCTGGGGATTGTTGGAGACGGCCATGACTGAAATGCTCCCCCCTCCCAAAGAGTCGAACCGGTTCGATAATGGGTTTCTTAAAAAGAAAGAGAGTTTCGGAGTCCAGATCGACGAAGGGAATAAAAAATCCACCTCCTTTGCGGAAATAGTGAGAAAGGGATCTACGGCAGACATCGAGAGGGATATTTTACCTTCAGAAGTTGGGGAGCTTGCCTTTGACTGTTCTTCGGCGGTCATCATCGAAAGGATTACCGTCGATGTGCAATGGATGGGTATAAGAGAGTCATGCTCAGCAATGGCGAATTTAGGTATCATCCTTAAACCCGTTTGTATTAATCTTGCAGTGGGCCTTTGCGGGAGCAAGAATGAAGCTAAGGAGTTGATCGAGGCGTGTAAGGGGCAGCAACCAGAACACTTCAGCATTCACCCGTGGGATTGCAATATGCTCGTTGAGAGGAAGAGGCTAGCCTTCAAGGGGGTTGGATTACAGCCCTAG MDRWKRVNIEWKVFHLRKIGDGRKVVMEEKHGSRTSRLDVDVGTFAWIRDCLMVLSNKRGRFGLLSLESNKGKKSSIFIPEGQNRRGWGLLETAMTEMLPPPKESNRFDNGFLKKKESFGVQIDEGNKKSTSFAEIVRKGSTADIERDILPSEVGELAFDCSSAVIIERITVDVQWMGIRESCSAMANLGIILKPVCINLAVGLCGSKNEAKELIEACKGQQPEHFSIHPWDCNMLVERKRLAFKGVGLQP Homology
BLAST of Spg027283 vs. NCBI nr
Match: TYK14183.1 (hypothetical protein E5676_scaffold8046G00070 [Cucumis melo var. makuwa]) HSP 1 Score: 102.1 bits (253), Expect = 7.4e-18 Identity = 69/231 (29.87%), Postives = 112/231 (48.48%), Query Frame = 0
BLAST of Spg027283 vs. NCBI nr
Match: KAA0054521.1 (transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 6.1e-04 Identity = 48/164 (29.27%), Postives = 78/164 (47.56%), Query Frame = 0
BLAST of Spg027283 vs. ExPASy TrEMBL
Match: A0A5D3CQQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8046G00070 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.6e-18 Identity = 69/231 (29.87%), Postives = 112/231 (48.48%), Query Frame = 0
BLAST of Spg027283 vs. ExPASy TrEMBL
Match: A0A0A0LY03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G673520 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 8.2e-07 Identity = 33/105 (31.43%), Postives = 50/105 (47.62%), Query Frame = 0
BLAST of Spg027283 vs. ExPASy TrEMBL
Match: A0A5A7ULV4 (Transcription elongation factor B polypeptide 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G003030 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.9e-04 Identity = 48/164 (29.27%), Postives = 78/164 (47.56%), Query Frame = 0
BLAST of Spg027283 vs. ExPASy TrEMBL
Match: A0A0A0KWZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G626010 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 8.5e-04 Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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