Spg027241 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg027241
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RT_RNaseH_2 domain-containing protein
Location	scaffold8: 6258768 .. 6261686 (-)
RNA-Seq Expression	Spg027241
Synteny	Spg027241

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGTGTCCGGTTGTCCCTTACAAGTGGTGTCAGAGCCATGCCCCGGGAGTAGCCGTGTTGGGTGGAATCCTCGGATGCCGAACAAAGAAGTTGTGAGCCTTAATAGTCATGGTGGAGGTCCGTGGATGAGATTACTCTGGGTAGGGGGTATACTCCGGAGAAGAGGAGTCATCCTAGATAAGAGGATTACTCTGGGTAGGGGGTATACTCCGGAGAAGATGAGTCATCCTAGATAAGAGCAAGAACTCTCTGTAAAGCGATGAAGCCTAGAGAGTTGGACGGATAGATGACTGTTTGAGGGGAGGATTGTTGGGAGTGCAACCAAAGTCCCACATTGGCTTGGGGTGATCCAAAAGCAAAGCCATGAGGGCTTATGCCCAAAGTGGACAATATCATACTATTGTGGAGATCTGTGTGTGTCCGGTAGTCCCCTACAAGTGGTATCAGAGCTCCGTTCGATCCAAAGTTTGGAGGTTCGTGGTTTAGTGCCTTTGGTGTTTCTATTCTTTGTTCAGGTTATTCTGTGAGTTATACATTGACTAATGTCTTCAATGTCGACTCGTTTCGAGGTTGCTCGATTTGATGGGAATGGTGATTTCGGTCTATGGAGAAAGAAGATTAAAGCTCTTTTGGTGCAACAAAAAGTAGCTAAAATCTTGTGTGACGAAAAGGACCTTCCGGCGACACTCACAGAAGATGATAAGAAGGAAATGGATGAGATTGCCTATTCGACGATTATACTCTATCTCTCAGATGGAGTACTTAGGCAAGTGAATGAGGTTACTACCACGGTTGAGTTATGGAAGAAGCTGGAGAGCCTTTATTTGACAAAGTCTCTACCAAACAAGTTATATCTAAAGGAGAAATTCTTTGGATATAAGATGGATCAAAGTAAAGGCTTGGAAGAGAACTTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATCGGTGAGAAGATGTCGGATGAGAATCAAGCAGTGATACTTTTGAATTCTTTGCCGGATTCGTTTCGAGAGGTAAAGGCTGCAATTAAATATGGTAGGGATTCACTAACCATGGATATTGTGTTGGATGCCTTGAAGACTAGAAATCTCGAAATTAAAAAGGAACGCAGGGAAGGTGAGTTACTTATAGCCAGAGGGAGAGCTGAGAAAAAGAACTGGAAAGGAAAGGATTCGAGAACCAGGTCCAAGTCCAGAGGAAAAGGGAAAAAGTGTTACTTGTGTCATAAGGATGGGCATTTTAAGAAAAATTGTCCATTGAACAAGAACAAGGAAGTCTCTGATGGTAAGAGAGGTGAATCGAGTTCAGCCAATGTGACTGATGGGTATGATTCAGCAGAGGTCTTGATGGTATCCAGTAGAGATTTTCAAGATGAGTGGATCATGGATTCAGGTTGCACATTCCACATGACTCTCAATCGAGAATATTTGATTGACTTTCAGGAAGCAAGTGGTGGAAAAGTAGTGAGAAAATAGAGAAGGAATACGTTGGAAGATAGAGAGGCTAAGAGACGAAGGCGGCAACAGCGAGCTGAGGTTACGGAAGTAGTGAGAAAATTGATTGAAGACATTGCTGAGGAAGTGGTTGAGGAAGAACAACCAAAAGACCCTGAGGAAAAGAAAGATGTTGAACAAGGAGACCAAACAGTTGAAAATCCGCAAGAGGAGCAAGAAAAGCGAGTGGAAGATGTACAAAGACAAGGTAATGGTCAGGAGCAACATACTCAAGAGGTCATGCCGGAGATTCCACGTCGTCGCCGCTGCAAGCAAAAGGCGGGACGAAATAAGGTGATCAAGACAGACACTCCATCTCCGTCAACGACAGAGTCTAAGAAGGAAAATTCTGAAAAAAATGAGCAAGAAAAAGAAGAGGCTGAGAAGAAAACGGAAGAAGAAGCCTTGACGAAGCAACAAGAGGACAAGGGCAAGGGAGTTGTTGAAGCGCTGGCAAGGACAGAAGAGACTGACGTTGAGGAACCGAGTCTGCCGTATGCGCGCTTCATTAATGATCTTGCCAGAGCAAAATATCTGAAAATGTTGAAGAGGGACTTCTTGTTTGAAAGGGGATTCAATGATGACTTGCCTCACTTCCTACGTGCTGGGATTACAAACCACGGATGGGATCAGTTTTGCGCGAAGCCAGAATCGGTGAATACAAATATTGTTCGTGAATTTTATGCGAACATAGATGAGCAAGAGGGATTCCAAGCCATGGTCCGAGGGGTAGCTGTCGATTGGAGCCCAGGGGCAATAAATTCTCTCTTCAACCTCCAGGATTTTCCACATGCCGGATTTAATAAGATGGTGGTGGCACCATTTAACGATCAATTGAACGCGACTGTTCGAAAGGTTGGTATTGAAGGGGCCCAATAGAGATTGTCGAAGACGGAGAAGCGCACATTCCAAGCAGCCTATTTGAAGAGTGAGGCTAACACATGGTTGGGCTTCATCAAGTTGCGTTTGCTCCCGACAACTCATGATTCGACAGTATCACGAGATAGAGTGTTGCTGGTATTTGCCATTCTGCGATCCTTGAGCATAGATGTTAGTAAGATTATTTCTAATGAAATCTACAATTGTTGGCGTAAGAAGGTGGGAAAGTTGTTCTTCCCAAACACGATTACCATGTTGTGCAGCAGGCCAGGGGTGCCCACGAGTCCAGAGGATGTTATTCTACTTGATAAAGGGATTATAGACAAGCCCAATTTGGCTCGGCTTCAGCGCACACAGGAGGCTCGCCAAGGTGGGCTAGTGTGCGGCATCCACCAGATTTTAGAGCAACTTCAACTTTTGGCCAGTAGGCAAGAGTATGCTGAAAGGCAGGCTCAGACCTACTGGACCTATGCTAAGAGACGGGATGCCACCCTAAGGAGGGCCCTGCAATACAATTTTTCAAAACCATACTAG

mRNA sequence

ATGTGTGTGTCCGGTTGTCCCTTACAAGTGGTGTCAGAGCCATGCCCCGGGAGTAGCCGTGTTGGGTGGAATCCTCGGATGCCGAACAAAGAAGTTGTGAGCCTTAATAGTCATGGTGGAGGTCCGTGGATGAGATTACTCTGGGTAGGGGGTATACTCCGGAGAAGAGGAGTCATCCTAGATAAGAGGATTACTCTGGGTAGGGGTCCCCTACAAGTGGTATCAGAGCTCCGTTCGATCCAAAGTTTGGAGCGAGCTGAGGTTACGGAAGTAGTGAGAAAATTGATTGAAGACATTGCTGAGGAAGTGGTTGAGGAAGAACAACCAAAAGACCCTGAGGAAAAGAAAGATGTTGAACAAGGAGACCAAACAGTTGAAAATCCGCAAGAGGAGCAAGAAAAGCGAGTGGAAGATGTACAAAGACAAGGTAATGGTCAGGAGCAACATACTCAAGAGGTCATGCCGGAGATTCCACGTCGTCGCCGCTGCAAGCAAAAGGCGGGACGAAATAAGGTGATCAAGACAGACACTCCATCTCCGTCAACGACAGAGTCTAAGAAGGAAAATTCTGAAAAAAATGAGCAAGAAAAAGAAGAGGCTGAGAAGAAAACGGAAGAAGAAGCCTTGACGAAGCAACAAGAGGACAAGGGCAAGGGAGTTGTTGAAGCGCTGGCAAGGACAGAAGAGACTGACGTTGAGGAACCGAGTCTGCCGTATGCGCGCTTCATTAATGATCTTGCCAGAGCAAAATATCTGAAAATGTTGAAGAGGGACTTCTTGTTTGAAAGGGGATTCAATGATGACTTGCCTCACTTCCTACGTGCTGGGATTACAAACCACGGATGGGATCAGTTTTGCGCGAAGCCAGAATCGGTGAATACAAATATTGTTCGTGAATTTTATGCGAACATAGATGAGCAAGAGGGATTCCAAGCCATGGTCCGAGGGGTAGCTGTCGATTGGAGCCCAGGGGCAATAAATTCTCTCTTCAACCTCCAGGATTTTCCACATGCCGGATTTAATAAGATGGTGGTGGCACCATTTAACGATCAATTGAACGCGACTGTTCGAAAGGTTGTATCACGAGATAGAGTGTTGCTGGTATTTGCCATTCTGCGATCCTTGAGCATAGATGTTAGTAAGATTATTTCTAATGAAATCTACAATTGTTGGCGTAAGAAGGTGGGAAAGTTGTTCTTCCCAAACACGATTACCATGTTGTGCAGCAGGCCAGGGGTGCCCACGAGTCCAGAGGATGTTATTCTACTTGATAAAGGGATTATAGACAAGCCCAATTTGGCTCGGCTTCAGCGCACACAGGAGGCTCGCCAAGGTGGGCTAGTGTGCGGCATCCACCAGATTTTAGAGCAACTTCAACTTTTGGCCAGTAGGCAAGAGTATGCTGAAAGGCAGGCTCAGACCTACTGGACCTATGCTAAGAGACGGGATGCCACCCTAAGGAGGGCCCTGCAATACAATTTTTCAAAACCATACTAG

Coding sequence (CDS)

ATGTGTGTGTCCGGTTGTCCCTTACAAGTGGTGTCAGAGCCATGCCCCGGGAGTAGCCGTGTTGGGTGGAATCCTCGGATGCCGAACAAAGAAGTTGTGAGCCTTAATAGTCATGGTGGAGGTCCGTGGATGAGATTACTCTGGGTAGGGGGTATACTCCGGAGAAGAGGAGTCATCCTAGATAAGAGGATTACTCTGGGTAGGGGTCCCCTACAAGTGGTATCAGAGCTCCGTTCGATCCAAAGTTTGGAGCGAGCTGAGGTTACGGAAGTAGTGAGAAAATTGATTGAAGACATTGCTGAGGAAGTGGTTGAGGAAGAACAACCAAAAGACCCTGAGGAAAAGAAAGATGTTGAACAAGGAGACCAAACAGTTGAAAATCCGCAAGAGGAGCAAGAAAAGCGAGTGGAAGATGTACAAAGACAAGGTAATGGTCAGGAGCAACATACTCAAGAGGTCATGCCGGAGATTCCACGTCGTCGCCGCTGCAAGCAAAAGGCGGGACGAAATAAGGTGATCAAGACAGACACTCCATCTCCGTCAACGACAGAGTCTAAGAAGGAAAATTCTGAAAAAAATGAGCAAGAAAAAGAAGAGGCTGAGAAGAAAACGGAAGAAGAAGCCTTGACGAAGCAACAAGAGGACAAGGGCAAGGGAGTTGTTGAAGCGCTGGCAAGGACAGAAGAGACTGACGTTGAGGAACCGAGTCTGCCGTATGCGCGCTTCATTAATGATCTTGCCAGAGCAAAATATCTGAAAATGTTGAAGAGGGACTTCTTGTTTGAAAGGGGATTCAATGATGACTTGCCTCACTTCCTACGTGCTGGGATTACAAACCACGGATGGGATCAGTTTTGCGCGAAGCCAGAATCGGTGAATACAAATATTGTTCGTGAATTTTATGCGAACATAGATGAGCAAGAGGGATTCCAAGCCATGGTCCGAGGGGTAGCTGTCGATTGGAGCCCAGGGGCAATAAATTCTCTCTTCAACCTCCAGGATTTTCCACATGCCGGATTTAATAAGATGGTGGTGGCACCATTTAACGATCAATTGAACGCGACTGTTCGAAAGGTTGTATCACGAGATAGAGTGTTGCTGGTATTTGCCATTCTGCGATCCTTGAGCATAGATGTTAGTAAGATTATTTCTAATGAAATCTACAATTGTTGGCGTAAGAAGGTGGGAAAGTTGTTCTTCCCAAACACGATTACCATGTTGTGCAGCAGGCCAGGGGTGCCCACGAGTCCAGAGGATGTTATTCTACTTGATAAAGGGATTATAGACAAGCCCAATTTGGCTCGGCTTCAGCGCACACAGGAGGCTCGCCAAGGTGGGCTAGTGTGCGGCATCCACCAGATTTTAGAGCAACTTCAACTTTTGGCCAGTAGGCAAGAGTATGCTGAAAGGCAGGCTCAGACCTACTGGACCTATGCTAAGAGACGGGATGCCACCCTAAGGAGGGCCCTGCAATACAATTTTTCAAAACCATACTAG

Protein sequence

MCVSGCPLQVVSEPCPGSSRVGWNPRMPNKEVVSLNSHGGGPWMRLLWVGGILRRRGVILDKRITLGRGPLQVVSELRSIQSLERAEVTEVVRKLIEDIAEEVVEEEQPKDPEEKKDVEQGDQTVENPQEEQEKRVEDVQRQGNGQEQHTQEVMPEIPRRRRCKQKAGRNKVIKTDTPSPSTTESKKENSEKNEQEKEEAEKKTEEEALTKQQEDKGKGVVEALARTEETDVEEPSLPYARFINDLARAKYLKMLKRDFLFERGFNDDLPHFLRAGITNHGWDQFCAKPESVNTNIVREFYANIDEQEGFQAMVRGVAVDWSPGAINSLFNLQDFPHAGFNKMVVAPFNDQLNATVRKVVSRDRVLLVFAILRSLSIDVSKIISNEIYNCWRKKVGKLFFPNTITMLCSRPGVPTSPEDVILLDKGIIDKPNLARLQRTQEARQGGLVCGIHQILEQLQLLASRQEYAERQAQTYWTYAKRRDATLRRALQYNFSKPY

Homology

[Close]

BLAST of Spg027241 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 124.0 bits (310), Expect = 3.6e-24
Identity = 103/334 (30.84%), Postives = 148/334 (44.31%), Query Frame = 0


Query: 241 RFINDLARAKYLKMLK-RDFLFERGFNDD-------LPHFLRAGITNHGWDQFCAKPESV 300
           +F  + A  +Y   ++ R    E+GF  D       LP F+   IT H W QFCA PE  
Sbjct: 24  KFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDP 83

Query: 301 NTNIVREFYANIDEQEGFQAMVRGVAVDWSPGAINSLFNLQD--FPHAGFNKMV------ 360
              +VREFYAN+ + E     VRGV V WS  AIN++F L D    H+ F + +      
Sbjct: 84  IVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQDLI 143

Query: 361 -----VAPFNDQLNATVR-------------------------------KVVSRDRVLLV 420
                VA    + N + +                               K VS+DR+LL+
Sbjct: 144 TVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLL 203

Query: 421 FAILRSLSIDVSKIISNEIYNCWRKKVGKLFFPNTITMLCSRPGVPTSPEDVILLDKGII 480
            ++L   SI+V ++I +EI  C  +K G LFFP+ IT LC     P    +  L + G I
Sbjct: 204 HSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEI 263

Query: 481 DKPNLARL------QRTQEARQGGLVCGIH-----QILEQLQLLASR------QEY---- 498
           D   +AR+      + TQ+                 IL+QL+ L  R      Q+Y    
Sbjct: 264 DAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMS 323

[Close]

BLAST of Spg027241 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 104.8 bits (260), Expect = 2.3e-18
Identity = 80/260 (30.77%), Postives = 117/260 (45.00%), Query Frame = 0


Query: 296 IVREFYANIDEQEGFQAMVRGVAVDWSPGAINSLFNLQD--FPHAGFNKMVVAP------ 355
           +VREFYAN+ + E     VRGV V WS  AIN++F L D    H+ F + +  P      
Sbjct: 16  LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEPELITVL 75

Query: 356 ------------------------------------FNDQLNATVRKVVSRDRVLLVFAI 415
                                                +  L  T  K+VS+DR+LL+ ++
Sbjct: 76  ETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSM 135

Query: 416 LRSLSIDVSKIISNEIYNCWRKKVGKLFFPNTITMLCSRPGVPTSPEDVILLDKGIIDKP 475
           L   SI+V ++I +EI  C  +K G LFFP+ IT LC     P    +  L + G ID  
Sbjct: 136 LNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCR--NAPFLVNEEKLHNTGEIDAI 195

Query: 476 NLARL--------------QRTQEARQGGLVCGIHQILEQLQLLASRQEYAERQAQTYWT 498
            +AR+               R   A        + Q L+ L+   S+QE+  +Q Q +W 
Sbjct: 196 AVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQRLSQQEHTHKQQQQFWA 255

[Close]

BLAST of Spg027241 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 100.9 bits (250), Expect = 3.3e-17
Identity = 81/253 (32.02%), Postives = 114/253 (45.06%), Query Frame = 0


Query: 241 RFINDLARAKYLKMLK-RDFLFERGFNDD-------LPHFLRAGITNHGWDQFCAKPESV 300
           +F  + A  +Y   ++ R    E+GF  D       LP F+   IT H W QFCA PE  
Sbjct: 15  KFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDP 74

Query: 301 NTNIVREFYANIDEQEGFQAMVRGVAVDWSPGAINSLFNLQD--FPHAGFNKMV------ 360
              +VREFYAN+ +       VRGV V WS  AIN++F L D    H+ F + +      
Sbjct: 75  IVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEHDLI 134

Query: 361 -----VAPFNDQLNATVR-------------------------------KVVSRDRVLLV 420
                VA    + N + +                               K VS+DR+LL+
Sbjct: 135 TVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLL 194

Query: 421 FAILRSLSIDVSKIISNEIYNCWRKKVGKLFFPNTITMLCSRPGVPTSPEDVILLDKGII 442
            ++L   SI+V ++I +EI  C  +K G LFFP+ IT LC     P    +  L + G I
Sbjct: 195 HSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEI 254

[Close]

BLAST of Spg027241 vs. NCBI nr
Match: KAE8695166.1 (hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus])

HSP 1 Score: 98.2 bits (243), Expect = 2.1e-16
Identity = 87/314 (27.71%), Postives = 128/314 (40.76%), Query Frame = 0


Query: 242 FINDLARAKYLKMLKRDFLFERGF------NDDLPHFLRAGITNHGWDQFCAKPESVNTN 301
           F+++ A+  Y  +  R   FE GF      N +L   +   +T H W +F   P  VN  
Sbjct: 15  FVDEAAKEHYQTIKNRRVFFELGFVFSEAENANLGSEVLDVVTKHKWQKFAKHPVPVNAT 74

Query: 302 IVREFYANIDEQEGFQAMVRGVAVDWSPGAINSLFNLQ--DFPHAGFNKMV--------- 361
           IV+EFY+NI E      MVRG+++ ++P AIN  F LQ  D  +  F + V         
Sbjct: 75  IVKEFYSNITEPNQHAVMVRGISIRFTPTAINRYFKLQVADDHNTSFAQEVDHETYQGIL 134

Query: 362 ------VAPFNDQLNATVRKVVSRD-----------------------------RVLLVF 421
                    +N Q     RK V RD                             R+LL+ 
Sbjct: 135 EDLCLPGTRWNGQ--QLKRKTVDRDRLLPHVKLWNHFMKHKLMPTSHNTTVSCQRMLLLH 194

Query: 422 AILRSLSIDVSKIISNEIYNCWRKKVGKLFFPNTITMLCSRPGVPTSPEDVILLDKGIID 481
           +IL   +ID+ KII    + C +++   L FPN IT LC +  V     D IL     ++
Sbjct: 195 SILTGRTIDIGKIIVEHAHLCLKRQASALVFPNLITALCRKKKVREEMFDEILSGIAGLN 254

Query: 482 KPNLARLQRTQEARQGGLVCGIHQILEQLQLLASRQEYAERQAQT-------------YW 491
           K  +  L   +EA+         ++     + AS  +  +   +T             Y+
Sbjct: 255 KAKIPMLLGYKEAKGKKHEATTSRVASSPHVRASSTDLEQAVQRTHQHVGQLSDKLMVYF 314

[Close]

BLAST of Spg027241 vs. NCBI nr
Match: KAE8712804.1 (hypothetical protein F3Y22_tig00110223pilonHSYRG00028 [Hibiscus syriacus])

HSP 1 Score: 90.1 bits (222), Expect = 5.7e-14
Identity = 75/249 (30.12%), Postives = 109/249 (43.78%), Query Frame = 0


Query: 247  ARAKYLKMLKRDFLFERGF------NDDLPHFLRAGITNHGWDQFCAKPESVNTNIVREF 306
            A  +Y  +  R   FE GF      + DL   +   +T H W +F   P +VN  +V+EF
Sbjct: 1387 AEERYQTIKNRRVFFELGFFFSEEEDADLGSEVLDVVTRHKWKKFAKHPAAVNATLVKEF 1446

Query: 307  YANIDEQEGFQAMVRGVAVDWSPGAINSLFNLQ---------------DFPHA----GFN 366
            Y+NI E      MV G+++ ++P AIN  F LQ                FP       F 
Sbjct: 1447 YSNITEPNQHAMMVHGISIRFTPTAINRYFKLQWNGQQLRRQTVDRDRLFPRVKLWNHFM 1506

Query: 367  KMVVAPFNDQLNATVRKVVSRDRVLLVFAILRSLSIDVSKIISNEIYNCWRKKVGKLFFP 426
            K  + P +   N T    VS  R++L+ +I+  L+ID+ KII  + + C ++    L FP
Sbjct: 1507 KHKLLPTSH--NTT----VSCQRMILLHSIISGLTIDIGKIIVEQDHLCLKRPTSALVFP 1566

Query: 427  NTITMLCSRPGVPTSPEDVILLDKGIIDKPN-----LARLQRTQEARQGGLVCGIHQILE 466
            N IT L  +  V     D IL     ++K         R  + + ARQ  L      +  
Sbjct: 1567 NLITALWRKKKVQEEMFDEILSGIAGLNKAKSLCCWATRKPKERNARQPHLTLHHLHMSG 1626

[Close]

BLAST of Spg027241 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-24
Identity = 103/334 (30.84%), Postives = 148/334 (44.31%), Query Frame = 0


Query: 241 RFINDLARAKYLKMLK-RDFLFERGFNDD-------LPHFLRAGITNHGWDQFCAKPESV 300
           +F  + A  +Y   ++ R    E+GF  D       LP F+   IT H W QFCA PE  
Sbjct: 24  KFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDP 83

Query: 301 NTNIVREFYANIDEQEGFQAMVRGVAVDWSPGAINSLFNLQD--FPHAGFNKMV------ 360
              +VREFYAN+ + E     VRGV V WS  AIN++F L D    H+ F + +      
Sbjct: 84  IVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQDLI 143

Query: 361 -----VAPFNDQLNATVR-------------------------------KVVSRDRVLLV 420
                VA    + N + +                               K VS+DR+LL+
Sbjct: 144 TVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLL 203

Query: 421 FAILRSLSIDVSKIISNEIYNCWRKKVGKLFFPNTITMLCSRPGVPTSPEDVILLDKGII 480
            ++L   SI+V ++I +EI  C  +K G LFFP+ IT LC     P    +  L + G I
Sbjct: 204 HSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEI 263

Query: 481 DKPNLARL------QRTQEARQGGLVCGIH-----QILEQLQLLASR------QEY---- 498
           D   +AR+      + TQ+                 IL+QL+ L  R      Q+Y    
Sbjct: 264 DAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMS 323

[Close]

BLAST of Spg027241 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-18
Identity = 80/260 (30.77%), Postives = 117/260 (45.00%), Query Frame = 0


Query: 296 IVREFYANIDEQEGFQAMVRGVAVDWSPGAINSLFNLQD--FPHAGFNKMVVAP------ 355
           +VREFYAN+ + E     VRGV V WS  AIN++F L D    H+ F + +  P      
Sbjct: 16  LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEPELITVL 75

Query: 356 ------------------------------------FNDQLNATVRKVVSRDRVLLVFAI 415
                                                +  L  T  K+VS+DR+LL+ ++
Sbjct: 76  ETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSM 135

Query: 416 LRSLSIDVSKIISNEIYNCWRKKVGKLFFPNTITMLCSRPGVPTSPEDVILLDKGIIDKP 475
           L   SI+V ++I +EI  C  +K G LFFP+ IT LC     P    +  L + G ID  
Sbjct: 136 LNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCR--NAPFLVNEEKLHNTGEIDAI 195

Query: 476 NLARL--------------QRTQEARQGGLVCGIHQILEQLQLLASRQEYAERQAQTYWT 498
            +AR+               R   A        + Q L+ L+   S+QE+  +Q Q +W 
Sbjct: 196 AVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQRLSQQEHTHKQQQQFWA 255

[Close]

BLAST of Spg027241 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-17
Identity = 81/253 (32.02%), Postives = 114/253 (45.06%), Query Frame = 0


Query: 241 RFINDLARAKYLKMLK-RDFLFERGFNDD-------LPHFLRAGITNHGWDQFCAKPESV 300
           +F  + A  +Y   ++ R    E+GF  D       LP F+   IT H W QFCA PE  
Sbjct: 15  KFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDP 74

Query: 301 NTNIVREFYANIDEQEGFQAMVRGVAVDWSPGAINSLFNLQD--FPHAGFNKMV------ 360
              +VREFYAN+ +       VRGV V WS  AIN++F L D    H+ F + +      
Sbjct: 75  IVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEHDLI 134

Query: 361 -----VAPFNDQLNATVR-------------------------------KVVSRDRVLLV 420
                VA    + N + +                               K VS+DR+LL+
Sbjct: 135 TVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLL 194

Query: 421 FAILRSLSIDVSKIISNEIYNCWRKKVGKLFFPNTITMLCSRPGVPTSPEDVILLDKGII 442
            ++L   SI+V ++I +EI  C  +K G LFFP+ IT LC     P    +  L + G I
Sbjct: 195 HSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEI 254

[Close]

BLAST of Spg027241 vs. ExPASy TrEMBL
Match: A0A6A2ZUE4 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110733pilonHSYRG00282 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-16
Identity = 87/314 (27.71%), Postives = 128/314 (40.76%), Query Frame = 0


Query: 242 FINDLARAKYLKMLKRDFLFERGF------NDDLPHFLRAGITNHGWDQFCAKPESVNTN 301
           F+++ A+  Y  +  R   FE GF      N +L   +   +T H W +F   P  VN  
Sbjct: 15  FVDEAAKEHYQTIKNRRVFFELGFVFSEAENANLGSEVLDVVTKHKWQKFAKHPVPVNAT 74

Query: 302 IVREFYANIDEQEGFQAMVRGVAVDWSPGAINSLFNLQ--DFPHAGFNKMV--------- 361
           IV+EFY+NI E      MVRG+++ ++P AIN  F LQ  D  +  F + V         
Sbjct: 75  IVKEFYSNITEPNQHAVMVRGISIRFTPTAINRYFKLQVADDHNTSFAQEVDHETYQGIL 134

Query: 362 ------VAPFNDQLNATVRKVVSRD-----------------------------RVLLVF 421
                    +N Q     RK V RD                             R+LL+ 
Sbjct: 135 EDLCLPGTRWNGQ--QLKRKTVDRDRLLPHVKLWNHFMKHKLMPTSHNTTVSCQRMLLLH 194

Query: 422 AILRSLSIDVSKIISNEIYNCWRKKVGKLFFPNTITMLCSRPGVPTSPEDVILLDKGIID 481
           +IL   +ID+ KII    + C +++   L FPN IT LC +  V     D IL     ++
Sbjct: 195 SILTGRTIDIGKIIVEHAHLCLKRQASALVFPNLITALCRKKKVREEMFDEILSGIAGLN 254

Query: 482 KPNLARLQRTQEARQGGLVCGIHQILEQLQLLASRQEYAERQAQT-------------YW 491
           K  +  L   +EA+         ++     + AS  +  +   +T             Y+
Sbjct: 255 KAKIPMLLGYKEAKGKKHEATTSRVASSPHVRASSTDLEQAVQRTHQHVGQLSDKLMVYF 314

[Close]

BLAST of Spg027241 vs. ExPASy TrEMBL
Match: A0A6A3B6J9 (RT_RNaseH_2 domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110223pilonHSYRG00028 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.8e-14
Identity = 75/249 (30.12%), Postives = 109/249 (43.78%), Query Frame = 0


Query: 247  ARAKYLKMLKRDFLFERGF------NDDLPHFLRAGITNHGWDQFCAKPESVNTNIVREF 306
            A  +Y  +  R   FE GF      + DL   +   +T H W +F   P +VN  +V+EF
Sbjct: 1387 AEERYQTIKNRRVFFELGFFFSEEEDADLGSEVLDVVTRHKWKKFAKHPAAVNATLVKEF 1446

Query: 307  YANIDEQEGFQAMVRGVAVDWSPGAINSLFNLQ---------------DFPHA----GFN 366
            Y+NI E      MV G+++ ++P AIN  F LQ                FP       F 
Sbjct: 1447 YSNITEPNQHAMMVHGISIRFTPTAINRYFKLQWNGQQLRRQTVDRDRLFPRVKLWNHFM 1506

Query: 367  KMVVAPFNDQLNATVRKVVSRDRVLLVFAILRSLSIDVSKIISNEIYNCWRKKVGKLFFP 426
            K  + P +   N T    VS  R++L+ +I+  L+ID+ KII  + + C ++    L FP
Sbjct: 1507 KHKLLPTSH--NTT----VSCQRMILLHSIISGLTIDIGKIIVEQDHLCLKRPTSALVFP 1566

Query: 427  NTITMLCSRPGVPTSPEDVILLDKGIIDKPN-----LARLQRTQEARQGGLVCGIHQILE 466
            N IT L  +  V     D IL     ++K         R  + + ARQ  L      +  
Sbjct: 1567 NLITALWRKKKVQEEMFDEILSGIAGLNKAKSLCCWATRKPKERNARQPHLTLHHLHMSG 1626

The following BLAST results are available for this feature:

BLAST of Spg027241 vs. NCBI nr


Match Name	E-value	Identity	Description
PON46472.1	3.6e-24	30.84	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
PON78020.1	2.3e-18	30.77	hypothetical protein PanWU01x14_023740 [Parasponia andersonii]	[more]
PON35554.1	3.3e-17	32.02	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
KAE8695166.1	2.1e-16	27.71	hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]	[more]
KAE8712804.1	5.7e-14	30.12	hypothetical protein F3Y22_tig00110223pilonHSYRG00028 [Hibiscus syriacus]	[more]

BLAST of Spg027241 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg027241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5BCG4	1.7e-24	30.84	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5DXM3	1.1e-18	30.77	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE...	[more]
A0A2P5AGA5	1.6e-17	32.02	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A6A2ZUE4	1.0e-16	27.71	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110733pilon...	[more]
A0A6A3B6J9	2.8e-14	30.12	RT_RNaseH_2 domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_ti...	[more]

BLAST of Spg027241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 498..498
None	No IPR available	COILS	Coil	Coil	coord: 183..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg027241.1	Spg027241.1	mRNA