Spg027039 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg027039
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	MYB transcription factor
Location	scaffold8: 3705978 .. 3707190 (-)
RNA-Seq Expression	Spg027039
Synteny	Spg027039

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGATCAAGAAGCAGCAGCAGTAGTGGCAGCCGTGGTGGAGGCGGAAGCAGCGGCGTCAGCTGCTACAGAGGCCACTGGCGGCCGGCGGAGGACAGTAAACTCCGGCAACTCGTTCAACAGTTTGGGCCACAGAATTGGAATTACATTGCGGAACATTTCGAGGGCAGATCTGGTATTATTTTTTTAAAATTCAATATCCATATTTTTTTAAAATATTGTTCAACTCTTTATTTATGTCTTTGTAGTTTAAAATTTTATAATAATTTAGTTGAAATTTTTCATCAAGGCAAACAAAGATTTCTTGTGGAAAAATCTTAAAATCTTAAAATTTTTTATATGTAGTTTGTTAATCTAAAACGAACGGATAATTTGTTCCCTTCTTCACTTCTTCTATTAAGAAACTAAATGTAATTTTGAACAATAGGGTATTAATTCATTAAATAATAGAAATTTATACTTTATCTTGACAAGATCTTCCAACAGTGAAGAATAAACCGTCACAATATTTTAAACCATAAGAACTAAATGGTTATCTCAACCTTATTCGATACAAATTTTAGATCATATTAGACTAAATGTTGTTATGTGAATGAAAGTATAGGGACTAATTAAGCATGTTTTGTAATGTTTTTTAGGGAAAAGTTGTAGATTGAGATGGTACAACCAATTAGATCCAAACATAAACAAGAATCCATTTACAGAGGAGGAAGAAGAAAGGCTACTAATGTTTCAACAGCTTCACGGGAACAAATGGGCATTAATAGCTCGACACTTCAAAGGAAGAACAGACAATGCAGTAAAAAATCACTACCATGTAATAATGGCTAGAAGAAGAAGAGAACGCTTCACAATATTCACTAACAATAACAACAACAACATCCTAAAGACTCGCCATAACTTATTACCCTTTTCAAAGGTCCTTCAAAGTTCCCATCAAAAGACTGCCATCAAATGGACTCCTCTCACGGCGGCTTCGTTGAGCGGGAATGGCGGGGGAAAGTCGGTGAAGGTGGCGGTGCCGTCGGGTTCCGATGAGAGGGAGGAGCAAAAGAGGAGGATTCCATTTATAGACTTTCTTGGTATGGGAAGCTCTTAGTTTAGCAAAGTTCAGAATTTTCTTATGGTGTGTGAGTTTCTTCTTGGTTGTCAAATGTTTTGATATGTAAGAGAAATTATGAATTGCCAACTATATTATATGAGAGAGAGA

mRNA sequence

ATGATGAGATCAAGAAGCAGCAGCAGTAGTGGCAGCCGTGGTGGAGGCGGAAGCAGCGGCGTCAGCTGCTACAGAGGCCACTGGCGGCCGGCGGAGGACAGTAAACTCCGGCAACTCGTTCAACAGTTTGGGCCACAGAATTGGAATTACATTGCGGAACATTTCGAGGGCAGATCTGGGAAAAGTTGTAGATTGAGATGGTACAACCAATTAGATCCAAACATAAACAAGAATCCATTTACAGAGGAGGAAGAAGAAAGGCTACTAATGTTTCAACAGCTTCACGGGAACAAATGGGCATTAATAGCTCGACACTTCAAAGGAAGAACAGACAATGCAGTAAAAAATCACTACCATGTAATAATGGCTAGAAGAAGAAGAGAACGCTTCACAATATTCACTAACAATAACAACAACAACATCCTAAAGACTCGCCATAACTTATTACCCTTTTCAAAGGTCCTTCAAAGTTCCCATCAAAAGACTGCCATCAAATGGACTCCTCTCACGGCGGCTTCGTTGAGCGGGAATGGCGGGGGAAAGTCGGTGAAGGTGGCGGTGCCGTCGGGTTCCGATGAGAGGGAGGAGCAAAAGAGGAGGATTCCATTTATAGACTTTCTTGGTATGGGAAGCTCTTAG

Coding sequence (CDS)

ATGATGAGATCAAGAAGCAGCAGCAGTAGTGGCAGCCGTGGTGGAGGCGGAAGCAGCGGCGTCAGCTGCTACAGAGGCCACTGGCGGCCGGCGGAGGACAGTAAACTCCGGCAACTCGTTCAACAGTTTGGGCCACAGAATTGGAATTACATTGCGGAACATTTCGAGGGCAGATCTGGGAAAAGTTGTAGATTGAGATGGTACAACCAATTAGATCCAAACATAAACAAGAATCCATTTACAGAGGAGGAAGAAGAAAGGCTACTAATGTTTCAACAGCTTCACGGGAACAAATGGGCATTAATAGCTCGACACTTCAAAGGAAGAACAGACAATGCAGTAAAAAATCACTACCATGTAATAATGGCTAGAAGAAGAAGAGAACGCTTCACAATATTCACTAACAATAACAACAACAACATCCTAAAGACTCGCCATAACTTATTACCCTTTTCAAAGGTCCTTCAAAGTTCCCATCAAAAGACTGCCATCAAATGGACTCCTCTCACGGCGGCTTCGTTGAGCGGGAATGGCGGGGGAAAGTCGGTGAAGGTGGCGGTGCCGTCGGGTTCCGATGAGAGGGAGGAGCAAAAGAGGAGGATTCCATTTATAGACTTTCTTGGTATGGGAAGCTCTTAG

Protein sequence

MMRSRSSSSSGSRGGGGSSGVSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNNNNNNILKTRHNLLPFSKVLQSSHQKTAIKWTPLTAASLSGNGGGKSVKVAVPSGSDEREEQKRRIPFIDFLGMGSS

Homology

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BLAST of Spg027039 vs. NCBI nr
Match: XP_023512391.1 (transcription factor CSA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.2 bits (962), Expect = 3.8e-100
Identity = 189/219 (86.30%), Postives = 198/219 (90.41%), Query Frame = 0


Query: 1   MMRSRSSSSSGSRGGGGSSG------VSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEH 60
           MMRSRSSSS GS GG G SG      VSCYRGHWRPAED+KLRQLV+QFGPQNWNYIAEH
Sbjct: 1   MMRSRSSSSGGSSGGVGGSGGCGNSSVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEH 60

Query: 61  FEGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAV 120
           FEGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAV
Sbjct: 61  FEGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAV 120

Query: 121 KNHYHVIMARRRRERFTIFTNNNNNNILKTRHNLLPFSKVLQSSHQKTAIKWTPLTAASL 180
           KNHYHVIMARRRRERFTIFTN+NNNNIL+TRH+LLPFSKVLQSSHQKTAIKWTPL A ++
Sbjct: 121 KNHYHVIMARRRRERFTIFTNHNNNNILRTRHSLLPFSKVLQSSHQKTAIKWTPLMATTV 180

Query: 181 SGNGGGKSV-KVAVPSGSDEREEQKRRIPFIDFLGMGSS 213
             +GGG S    AV SGSD REEQKRR+PFIDFLGMGSS
Sbjct: 181 LRHGGGMSAPTAAVVSGSDGREEQKRRVPFIDFLGMGSS 219

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BLAST of Spg027039 vs. NCBI nr
Match: XP_022932004.1 (transcription factor CSA-like [Cucurbita moschata])

HSP 1 Score: 371.3 bits (952), Expect = 5.5e-99
Identity = 186/218 (85.32%), Postives = 197/218 (90.37%), Query Frame = 0


Query: 1   MMRSRSSSSSGSRGGGGSSG-----VSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHF 60
           MMRSRSSSS GS GG G  G     VSCYRGHWRPAED+KLRQLV+QFGPQNWNYIAEHF
Sbjct: 1   MMRSRSSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60

Query: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120
           EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
Sbjct: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120

Query: 121 NHYHVIMARRRRERFTIFTNNNNNNILKTRHNLLPFSKVLQSSHQKTAIKWTPLTAASLS 180
           NHYHVIMARRRRERFTIFTN+NNNNIL+TRH+LLPFSKVLQSS QKTA+KWTPL A ++ 
Sbjct: 121 NHYHVIMARRRRERFTIFTNHNNNNILRTRHSLLPFSKVLQSSQQKTAVKWTPLMATTVL 180

Query: 181 GNGGGK-SVKVAVPSGSDEREEQKRRIPFIDFLGMGSS 213
            +GGG  +   AV SGSDEREEQKRR+PFIDFLGMGSS
Sbjct: 181 RHGGGMLAPTAAVVSGSDEREEQKRRVPFIDFLGMGSS 218

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BLAST of Spg027039 vs. NCBI nr
Match: KAG6571346.1 (Transcription factor MYB52, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 370.5 bits (950), Expect = 9.4e-99
Identity = 188/219 (85.84%), Postives = 197/219 (89.95%), Query Frame = 0


Query: 1   MMRSRSSSSSGSRGGGGSSG-----VSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHF 60
           MMRSRSSSS GS GG G  G     VSCYRGHWRPAED+KLRQLV+QFGPQNWNYIAEHF
Sbjct: 1   MMRSRSSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60

Query: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120
           EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
Sbjct: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120

Query: 121 NHYHVIMARRRRERFTIFTN-NNNNNILKTRHNLLPFSKVLQSSHQKTAIKWTPLTAASL 180
           NHYHVIMARRRRERFTIFTN NNNNNIL+TRH+LLPFSKVLQSS QKTA+KWTPL A ++
Sbjct: 121 NHYHVIMARRRRERFTIFTNHNNNNNILRTRHSLLPFSKVLQSSQQKTAVKWTPLMATTV 180

Query: 181 SGNGGGKSV-KVAVPSGSDEREEQKRRIPFIDFLGMGSS 213
             +GGG S    AV SGSDEREEQKRR+PFIDFLGMGSS
Sbjct: 181 LRHGGGMSAPTAAVVSGSDEREEQKRRVPFIDFLGMGSS 219

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BLAST of Spg027039 vs. NCBI nr
Match: XP_022971627.1 (transcription factor CSA-like [Cucurbita maxima])

HSP 1 Score: 369.0 bits (946), Expect = 2.7e-98
Identity = 185/218 (84.86%), Postives = 195/218 (89.45%), Query Frame = 0


Query: 1   MMRSRSSSSSGSRGGGGSSG-----VSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHF 60
           MMRSRSSSS GS GG G  G     VSCYRGHWRPAED+KLRQLV+Q GPQNWNYIAEHF
Sbjct: 1   MMRSRSSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQLGPQNWNYIAEHF 60

Query: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120
           EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
Sbjct: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120

Query: 121 NHYHVIMARRRRERFTIFTNNNNNNILKTRHNLLPFSKVLQSSHQKTAIKWTPLTAASLS 180
           NHYHVIMARRRRERFTIFTN+NNNNIL+TRH+LLPFSKVLQSSHQKTAIKWTPL A ++ 
Sbjct: 121 NHYHVIMARRRRERFTIFTNHNNNNILRTRHSLLPFSKVLQSSHQKTAIKWTPLMATTVL 180

Query: 181 GNGGGKSVKVA-VPSGSDEREEQKRRIPFIDFLGMGSS 213
            +GGG     A V  GSDERE+QKRR+PFIDFLGMGSS
Sbjct: 181 RHGGGMLAPTATVAVGSDEREDQKRRVPFIDFLGMGSS 218

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BLAST of Spg027039 vs. NCBI nr
Match: XP_023007242.1 (transcription factor CSA-like [Cucurbita maxima])

HSP 1 Score: 351.7 bits (901), Expect = 4.5e-93
Identity = 181/223 (81.17%), Postives = 189/223 (84.75%), Query Frame = 0


Query: 1   MMRSRSSSSSGSRGGG------GSSGVSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEH 60
           M+RSRSSSSS   GGG      GSSGV+CYRGHWRPAED+KLRQLV+QFGPQNWNYIAEH
Sbjct: 1   MIRSRSSSSSSGGGGGSGGCGSGSSGVTCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEH 60

Query: 61  FEGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAV 120
           FE RSGKSCRLRWYNQLDPNINKNPFTEEEEERLL+FQQLHGNKWALIARH KGRTDNAV
Sbjct: 61  FEARSGKSCRLRWYNQLDPNINKNPFTEEEEERLLIFQQLHGNKWALIARHLKGRTDNAV 120

Query: 121 KNHYHVIMARRRRERFTIFTNNNNNNILKTRHNLLPFSKVLQSSHQKTAIKWTPLTAASL 180
           KNHYHVIMARRRRERFTIFT NNNNNIL++RH LLPFS VLQSSHQK   KW+PLT    
Sbjct: 121 KNHYHVIMARRRRERFTIFT-NNNNNILRSRHCLLPFSNVLQSSHQKITPKWSPLTVGPT 180

Query: 181 SGNGGGKSVKVAVPSGSDERE-----EQKRRIPFIDFLGMGSS 213
             NG GKS  V   SGSDERE     EQKRRIPFIDFLGMGSS
Sbjct: 181 LENGRGKSAAVVASSGSDEREEEMKGEQKRRIPFIDFLGMGSS 222

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BLAST of Spg027039 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.6e-46
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 23  CYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFTE 82
           C RGHWRPAED KLR+LV+QFGP NWN IA+   GRSGKSCRLRW+NQLDP IN+NPFTE
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 83  EEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRER 130
           EEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR RER
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRER 109

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BLAST of Spg027039 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 182.2 bits (461), Expect = 6.2e-45
Identity = 84/119 (70.59%), Postives = 96/119 (80.67%), Query Frame = 0


Query: 15  GGGSSGVSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPN 74
           GGG  G  C RGHWRPAED+KL+ LV Q+GPQNWN IAE  +GRSGKSCRLRW+NQLDP 
Sbjct: 39  GGGVQGKLCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPR 98

Query: 75  INKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIF 134
           IN+  FTEEEEERL+   + +GNKWALIAR F GRTDNAVKNH+HV+MARR RE+   F
Sbjct: 99  INRRAFTEEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHREQSGAF 157

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BLAST of Spg027039 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 78/108 (72.22%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 21  VSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPF 80
           + C RGHWRPAED KL+ LV+Q+GP NWN IA    GRSGKSCRLRW+NQLDP IN+NPF
Sbjct: 2   IMCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPF 61

Query: 81  TEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRE 129
           TEEEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR R+
Sbjct: 62  TEEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

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BLAST of Spg027039 vs. ExPASy Swiss-Prot
Match: Q6R053 (Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.4e-42
Identity = 84/126 (66.67%), Postives = 95/126 (75.40%), Query Frame = 0


Query: 3   RSRSSSSSGSRGGGGSSGVSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHFEGRSGKS 62
           R  +  S   RG  G +   C RGHWRP ED+KL++LV QFGPQNWN I+ H  GRSGKS
Sbjct: 71  RGENEKSLRMRGKSGINTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKS 130

Query: 63  CRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIM 122
           CRLRW+NQLDP INK  FTEEEE RLL   + +GNKWALI+R F GRTDNAVKNH+HVIM
Sbjct: 131 CRLRWFNQLDPRINKRAFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIM 190

Query: 123 ARRRRE 129
           ARR RE
Sbjct: 191 ARRTRE 196

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BLAST of Spg027039 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 8.4e-42
Identity = 85/138 (61.59%), Postives = 102/138 (73.91%), Query Frame = 0


Query: 13  RGGGGSSGVSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLD 72
           R  G SS  S  RGHWRPAED+KL++LV  +GPQNWN IAE  +GRSGKSCRLRW+NQLD
Sbjct: 95  RSCGHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLD 154

Query: 73  PNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTI 132
           P IN+  FTEEEEERL+   +L+GNKWA+IAR F GRTDN+VKNH+HVIMAR+ RE+ + 
Sbjct: 155 PRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSS 214

Query: 133 FTNNNNNNILKTRHNLLP 151
           +        LK   N  P
Sbjct: 215 YRRRKTMVSLKPLINPNP 232

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BLAST of Spg027039 vs. ExPASy TrEMBL
Match: A0A6J1EVU5 (transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111438332 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.7e-99
Identity = 186/218 (85.32%), Postives = 197/218 (90.37%), Query Frame = 0


Query: 1   MMRSRSSSSSGSRGGGGSSG-----VSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHF 60
           MMRSRSSSS GS GG G  G     VSCYRGHWRPAED+KLRQLV+QFGPQNWNYIAEHF
Sbjct: 1   MMRSRSSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60

Query: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120
           EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
Sbjct: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120

Query: 121 NHYHVIMARRRRERFTIFTNNNNNNILKTRHNLLPFSKVLQSSHQKTAIKWTPLTAASLS 180
           NHYHVIMARRRRERFTIFTN+NNNNIL+TRH+LLPFSKVLQSS QKTA+KWTPL A ++ 
Sbjct: 121 NHYHVIMARRRRERFTIFTNHNNNNILRTRHSLLPFSKVLQSSQQKTAVKWTPLMATTVL 180

Query: 181 GNGGGK-SVKVAVPSGSDEREEQKRRIPFIDFLGMGSS 213
            +GGG  +   AV SGSDEREEQKRR+PFIDFLGMGSS
Sbjct: 181 RHGGGMLAPTAAVVSGSDEREEQKRRVPFIDFLGMGSS 218

[Close]

BLAST of Spg027039 vs. ExPASy TrEMBL
Match: A0A6J1I2H4 (transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111470309 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 185/218 (84.86%), Postives = 195/218 (89.45%), Query Frame = 0


Query: 1   MMRSRSSSSSGSRGGGGSSG-----VSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHF 60
           MMRSRSSSS GS GG G  G     VSCYRGHWRPAED+KLRQLV+Q GPQNWNYIAEHF
Sbjct: 1   MMRSRSSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQLGPQNWNYIAEHF 60

Query: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120
           EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
Sbjct: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120

Query: 121 NHYHVIMARRRRERFTIFTNNNNNNILKTRHNLLPFSKVLQSSHQKTAIKWTPLTAASLS 180
           NHYHVIMARRRRERFTIFTN+NNNNIL+TRH+LLPFSKVLQSSHQKTAIKWTPL A ++ 
Sbjct: 121 NHYHVIMARRRRERFTIFTNHNNNNILRTRHSLLPFSKVLQSSHQKTAIKWTPLMATTVL 180

Query: 181 GNGGGKSVKVA-VPSGSDEREEQKRRIPFIDFLGMGSS 213
            +GGG     A V  GSDERE+QKRR+PFIDFLGMGSS
Sbjct: 181 RHGGGMLAPTATVAVGSDEREDQKRRVPFIDFLGMGSS 218

[Close]

BLAST of Spg027039 vs. ExPASy TrEMBL
Match: A0A6J1KY48 (transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111499785 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.2e-93
Identity = 181/223 (81.17%), Postives = 189/223 (84.75%), Query Frame = 0


Query: 1   MMRSRSSSSSGSRGGG------GSSGVSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEH 60
           M+RSRSSSSS   GGG      GSSGV+CYRGHWRPAED+KLRQLV+QFGPQNWNYIAEH
Sbjct: 1   MIRSRSSSSSSGGGGGSGGCGSGSSGVTCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEH 60

Query: 61  FEGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAV 120
           FE RSGKSCRLRWYNQLDPNINKNPFTEEEEERLL+FQQLHGNKWALIARH KGRTDNAV
Sbjct: 61  FEARSGKSCRLRWYNQLDPNINKNPFTEEEEERLLIFQQLHGNKWALIARHLKGRTDNAV 120

Query: 121 KNHYHVIMARRRRERFTIFTNNNNNNILKTRHNLLPFSKVLQSSHQKTAIKWTPLTAASL 180
           KNHYHVIMARRRRERFTIFT NNNNNIL++RH LLPFS VLQSSHQK   KW+PLT    
Sbjct: 121 KNHYHVIMARRRRERFTIFT-NNNNNILRSRHCLLPFSNVLQSSHQKITPKWSPLTVGPT 180

Query: 181 SGNGGGKSVKVAVPSGSDERE-----EQKRRIPFIDFLGMGSS 213
             NG GKS  V   SGSDERE     EQKRRIPFIDFLGMGSS
Sbjct: 181 LENGRGKSAAVVASSGSDEREEEMKGEQKRRIPFIDFLGMGSS 222

[Close]

BLAST of Spg027039 vs. ExPASy TrEMBL
Match: A0A6J1G7J0 (transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111451467 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.9e-91
Identity = 177/222 (79.73%), Postives = 188/222 (84.68%), Query Frame = 0


Query: 1   MMRSRSSSSSGSRGGG-----GSSGVSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHF 60
           M+ SRSSSSS   GGG     GSSGV+CYRGHWRPAED+KLRQLV+QFGPQNWNYIAEHF
Sbjct: 3   MIGSRSSSSSSGGGGGGGCGSGSSGVTCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 62

Query: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120
           E RSGKSCRLRWYNQLDPNINKNPFTEEEEERLL+FQ+LHGNKWALIARHFKGRTDNAVK
Sbjct: 63  EARSGKSCRLRWYNQLDPNINKNPFTEEEEERLLIFQRLHGNKWALIARHFKGRTDNAVK 122

Query: 121 NHYHVIMARRRRERFTIFTNNNNNNILKTRHNLLPFSKVLQSSHQKTAIKWTPLTAASLS 180
           NHYHVIMARRRRERFTIFT  NNNNIL++RH LL FS VLQSSHQK   KW+PLTA  + 
Sbjct: 123 NHYHVIMARRRRERFTIFT--NNNNILRSRHCLLSFSNVLQSSHQKMTPKWSPLTAGPML 182

Query: 181 GNGGGKSVKVAVPSGSDEREEQ-----KRRIPFIDFLGMGSS 213
            NG GKSV     SGS EREE+     KRRIPFIDFLGMGSS
Sbjct: 183 ENGRGKSVAAVASSGSGEREEEMKGEKKRRIPFIDFLGMGSS 222

[Close]

BLAST of Spg027039 vs. ExPASy TrEMBL
Match: A0A5D3BQW6 (Transcriptional activator Myb OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00600 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.5e-89
Identity = 178/217 (82.03%), Postives = 188/217 (86.64%), Query Frame = 0


Query: 1   MMRSRSSSSSG--SRGGGGSSGVSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHFEGR 60
           MMRSRSSSSSG  S GGGGSSGVSCYRGHWRPAED+KLRQLV+QFGPQNWNYIAEHFEGR
Sbjct: 1   MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60

Query: 61  SGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120
           SGKSCRLRWYNQLDPNINKNPF+EEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY
Sbjct: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120

Query: 121 HVIMARRRRERFTIFTNNNNNNILKTRHNLLPFSKVLQSSHQKTAIKWTPLTAAS--LSG 180
           HVIMARRRRERFTIFTN+N NN    RH+LL FSK+       TA+KWTPLTA +  L G
Sbjct: 121 HVIMARRRRERFTIFTNHNKNN-NTIRHSLLSFSKM------TTAVKWTPLTAGAPVLLG 180

Query: 181 NGGGK-SVKVAVPSGSDEREEQKRRIPFIDFLGMGSS 213
           NG GK S+   V SGS E E+ KRRIPFIDFLGMGSS
Sbjct: 181 NGRGKSSLTAVVASGSGEGEDHKRRIPFIDFLGMGSS 210

[Close]

BLAST of Spg027039 vs. TAIR 10
Match: AT4G33450.1 (myb domain protein 69 )

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-47
Identity = 89/134 (66.42%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 22  SCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFT 81
           SC RGHWRP ED  LRQLV+Q+GP+NWN+IA+H  GRSGKSCRLRWYNQLDPNI K PFT
Sbjct: 16  SCQRGHWRPVEDDNLRQLVEQYGPKNWNFIAQHLYGRSGKSCRLRWYNQLDPNITKKPFT 75

Query: 82  EEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNNNNNNI 141
           EEEEERLL   ++ GN+WA IAR F GRTDNAVKNH+HVIMARR+RE F+    +  N  
Sbjct: 76  EEEEERLLKAHRIQGNRWASIARLFPGRTDNAVKNHFHVIMARRKRENFSSTATSTFN-- 135

Query: 142 LKTRHNLLPFSKVL 156
            +T H +L  S  L
Sbjct: 136 -QTWHTVLSPSSSL 146

[Close]

BLAST of Spg027039 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 )

HSP 1 Score: 185.7 bits (470), Expect = 4.0e-47
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 23  CYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFTE 82
           C RGHWRPAED KLR+LV+QFGP NWN IA+   GRSGKSCRLRW+NQLDP IN+NPFTE
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 83  EEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRER 130
           EEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR RER
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRER 109

[Close]

BLAST of Spg027039 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 177.9 bits (450), Expect = 8.3e-45
Identity = 78/108 (72.22%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 21  VSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPF 80
           + C RGHWRPAED KL+ LV+Q+GP NWN IA    GRSGKSCRLRW+NQLDP IN+NPF
Sbjct: 2   IMCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPF 61

Query: 81  TEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRE 129
           TEEEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR R+
Sbjct: 62  TEEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

[Close]

BLAST of Spg027039 vs. TAIR 10
Match: AT5G17800.1 (myb domain protein 56 )

HSP 1 Score: 172.2 bits (435), Expect = 4.6e-43
Identity = 84/126 (66.67%), Postives = 95/126 (75.40%), Query Frame = 0


Query: 3   RSRSSSSSGSRGGGGSSGVSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHFEGRSGKS 62
           R  +  S   RG  G +   C RGHWRP ED+KL++LV QFGPQNWN I+ H  GRSGKS
Sbjct: 71  RGENEKSLRMRGKSGINTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKS 130

Query: 63  CRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIM 122
           CRLRW+NQLDP INK  FTEEEE RLL   + +GNKWALI+R F GRTDNAVKNH+HVIM
Sbjct: 131 CRLRWFNQLDPRINKRAFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIM 190

Query: 123 ARRRRE 129
           ARR RE
Sbjct: 191 ARRTRE 196

[Close]

BLAST of Spg027039 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 171.8 bits (434), Expect = 6.0e-43
Identity = 85/138 (61.59%), Postives = 102/138 (73.91%), Query Frame = 0


Query: 13  RGGGGSSGVSCYRGHWRPAEDSKLRQLVQQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLD 72
           R  G SS  S  RGHWRPAED+KL++LV  +GPQNWN IAE  +GRSGKSCRLRW+NQLD
Sbjct: 95  RSCGHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLD 154

Query: 73  PNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTI 132
           P IN+  FTEEEEERL+   +L+GNKWA+IAR F GRTDN+VKNH+HVIMAR+ RE+ + 
Sbjct: 155 PRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSS 214

Query: 133 FTNNNNNNILKTRHNLLP 151
           +        LK   N  P
Sbjct: 215 YRRRKTMVSLKPLINPNP 232

The following BLAST results are available for this feature:

BLAST of Spg027039 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512391.1	3.8e-100	86.30	transcription factor CSA-like [Cucurbita pepo subsp. pepo]	[more]
XP_022932004.1	5.5e-99	85.32	transcription factor CSA-like [Cucurbita moschata]	[more]
KAG6571346.1	9.4e-99	85.84	Transcription factor MYB52, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022971627.1	2.7e-98	84.86	transcription factor CSA-like [Cucurbita maxima]	[more]
XP_023007242.1	4.5e-93	81.17	transcription factor CSA-like [Cucurbita maxima]	[more]

BLAST of Spg027039 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R0C4	5.6e-46	76.64	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
Q5NBM8	6.2e-45	70.59	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q9FX36	1.2e-43	72.22	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]
Q6R053	6.4e-42	66.67	Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1	[more]
Q9SEZ4	8.4e-42	61.59	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]

BLAST of Spg027039 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVU5	2.7e-99	85.32	transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111438332 PE=4...	[more]
A0A6J1I2H4	1.3e-98	84.86	transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111470309 PE=4 S...	[more]
A0A6J1KY48	2.2e-93	81.17	transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111499785 PE=4 S...	[more]
A0A6J1G7J0	5.9e-91	79.73	transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111451467 PE=4...	[more]
A0A5D3BQW6	2.5e-89	82.03	Transcriptional activator Myb OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Spg027039 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33450.1	1.8e-47	66.42	myb domain protein 69	[more]
AT1G17950.1	4.0e-47	76.64	myb domain protein 52	[more]
AT1G73410.1	8.3e-45	72.22	myb domain protein 54	[more]
AT5G17800.1	4.6e-43	66.67	myb domain protein 56	[more]
AT1G69560.1	6.0e-43	61.59	myb domain protein 105	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 76..124 e-value: 4.6E-14 score: 62.7 coord: 24..73 e-value: 3.2E-13 score: 59.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 25..71 score: 10.847389
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 72..122 score: 8.931343
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 28..69 e-value: 2.61702E-12 score: 57.2002
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 79..119 e-value: 2.73073E-10 score: 51.8074
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 28..88 e-value: 3.7E-18 score: 65.5
None	No IPR available	GENE3D	1.10.10.60		coord: 24..76 e-value: 1.1E-23 score: 84.9
None	No IPR available	GENE3D	1.10.10.60		coord: 78..148 e-value: 2.2E-16 score: 61.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR45614:SF100	MYB TRANSCRIPTION FACTOR	coord: 16..141
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 16..141
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 25..71 score: 17.583055
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 72..126 score: 22.43087
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 23..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg027039.1	Spg027039.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding