Spg026939 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg026939
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold13: 23929429 .. 23934005 (-)
RNA-Seq ExpressionSpg026939
SyntenySpg026939
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTACACACGGATGGAGCACAGTAAATGGAAGATCTTACCGTTTAACAGATAATAAAATTTTTTCATGAATCCATGTGGTTAAAACGGTAACTTAAATTAATTAGGAGATGATTAGGGGCTCTAATTATTCGTTGAAGATCTTTGAGTTAGTGCCTTATTTATACAAGCTCCTATCAGGTACGTTTTTCACTCTAATTTTTTATCTAACCTGTTGTGCATTTTTCTCTGTGTGTATTATTATTGTGACGGTAAAAGCATGAGCAGGGAAAGAAAGAGAGACTGAGGACGAAGTGCGCATGACACTTGAGGCACCTAATATAGGAGAACATGCAGAGCAAGACGTCCAAACTGAAAAAGAAATTAAAGACCCCTGAGGAAGTAGTCCCGCAAGTTGAAGTTACCAACTGATCAGCATTTTGAAGCGAAAGAAGAAGTGCCTGTCGATGAGGATATGATTGAAGAGGCTTCATAGAGACCAAAGAAAAAGAAGAAGAGGTCTAAGAGAAAAAAAAAGATTTCGGTACGGGAGATTTATCCATGAAGAGGCGAGGCAAAAATATCAAGAAGTCCTGAAGCAAGATTTTCTGATGAAGCGCGGCTTCGATGGTGGTAAAGAGCTCGCCCATTTTCCTTGAGCAAACATCTCTAATCACGGTTGGAAACGGTTGTGCGCAAAGCCGAAGCCCACTGTTGATCAACTAGAATGGGAGTTCTACGCCAACATCGATGAAAATGAAGGATTCTTGGTTATTGTTCGTAGAGTTGTTGTCAACTGGAGCCTTGGAGTGATTAATTCTTTATTTAATTTGCAAGACTTCTCCCACGCTGTTTTCAATGAAATATTAGTTGCTTCCTCAAACGAGCAACTGAATGCCCAGTGGAAGTTGTCTAGGACGAAGGCAAGAACATTCCAGTCAGCATACTTGAAGAGTGAGGCTACTACTTGGCTCGACTTTATCAAGAAGAGATTATTGCTTACAGCGTACGCCTCCACTATCCCCCGTGATCGGGTGCACTTGAAGGTTCAGAGTCCCAAAGAGTTACAATGATATAAACTTGTTTGATAGGAGGATTCTTGACACTACCAATCTGGCTAGGCTTCAAAAAGGTGAGGTGTGCCAGGGTGGTTTGTTGTGCGATGTCCATAAGTACTGGAGCAATCTGAGAGGATGTTCAGTAGGCCAGTATTCACTGAGAGACAACTTCAAACCTACTAGAGCTATAATCTTAGAAGAGGCACCACACTAAGGAGGGCTATGCAAGTGAATTTTTCTAAGCCATATCAAGCCTTCCTAATTGTCCTTGATGATCTTATGAAGCTATGCATTCCACCCCCGCCCATCATTTGAGAGAAAAAAGAAAACCCAGAGCCTGAACATGAAGAAGAATTAAAGGGAAGTTTCAGTTTCTTCGAGCAAATATTTTGATGCCTGATTTTGTGTGCTCGCCTTGCATGTGTTGTGTTCTTTCTGCTTATGTTATGTTCTGCTTCTTTGTTTTTATCTGCTGCTTTAAAATCTATCTCTATCATGATTATGTTAATCTGTGATCTTGATCTTTAATGAAATCAAATTTTGTTTTGTTTGGCACATCTGAGTATCTAACTTAATTTTCTTCTGAATTTTTGAAGCTTGGACTAGTTAGCTTAATTAGATCAAGGTATTCTGATCTCCAGAAACCTGTTGCTTGAGCATTTCTTCTAGCCTGGTCATCGCTGCGGCAAGAAGATTCTGAGGTAGTGTTGACTCATGTGATCCTCCTTAAGCTTAATTCTAGTCCCATGCCTAGTTTAAAAATTCAGATAGAAAAATTTAAGTTTGGGGGTATAATTTCAGATGTTAATGATTCATTGGGGACAATGAATAATTTAAGTTTGGGGGACTTTTAGCTACTCCAATTGTTTTGCTTGAACATTCCTCTCCTTCATTAATTATTTTTCCAGGTTGTTGAGTAACCAGGGACATTTGTGACACCCACAGTTTGTCTTTGCGTCAAAAGATGACCTAGGAAAAGAAAAAATGATGATAAAAATGATTATTCGCTGAAAAAAATTTATTGTGAAAATTTTGCTGAGAAAATTCATAGAGCAAAACTTTTGAAGGATGAATGATAATCTAGCAGTTTTCTGTCTCCCAGGACTTAGGTGAGCTTCATCATAAAATGTCGCCATTCTGAGGAGCAAGAGATAGAATAACTAAGGATTTTTGAGCTAGCAATGAGTATTTAGCCTAATTGGTGATAAGTTTGAGGCAAGGGTATACTGCAACATAAAGTGGGTCATCCCATGCTTAAGAACTTATGACTGTAGGGCTGCTTTAAGTCTGAAAAACAAAAATATAAACCCCTTAAAAATGTGGTTAATATGTCTGATAATAAAGCTAGGTTGTGGCAAGTTCTTAGGATTGAGTTAAAGGTGGTGATTATTTGTTCAAAGCTGAAAGAATTATTTTGCTGCAGCAGTGCTTGGTTTTGCAGGATGCTCAGGTAAAGGTTGAAGGTAGTGTTGAAATATCTGTTTTGATTGAGTTGTGCTATGACTAATGTTTTGAATTCTTAAGGGAAGGTGAGTTAGTATTGCTCGGGACGTGCAATAGTTCAAGTTTGGGGGTATGATAACTCTCCAAAAGGGAGTTATTTAGGCCTTAGTTCTATAGTATTTTGTGTGTCATTTGTGTTGAATAGGGTTGCTTTTAGATGAATATTATATGTTTTAATCCATTTGGAAGAATGGAGGCTTTGGAAGTTATTTTGTGCAGAAAATGTTGCTGAGCGACTTGAGGGAGCAAATTCTGTGCTGCAGCAAAACTAGAAGCAAAACTGCCACGTCACAGCTCGTTATCCATTTTAATAACGTGGCGTTAGCTGAATTATTTTCGGATCTAAGAAGCTTGGAGAGCCTGCCATGTGTCCAATTTAACCTAAACCTCATCTTATAAAAGGAGGAGCCGTCAAAGTTAAAGGCATTCATGATTTGGAGACCGAATCAATCGGCCGGAGGCCGAATTGACGGCGGAATGGAGATCTAAGAAGACCATTTGCGATTCCACTCAAGGAGACAAAGTTCTTATATGTTCTTGGTGGTTTGGAGCAGCCGTTTCATCTCCCCAATTGCTATAAGGATTAGTATTTCTTGTGTATTTTGCATTATGGATGTGCTTATCAAGATTGTAACGTATTTTATGTTTTCAATCATGAACTAATATTTTTGTAGGCATAGGTTAAGAATTATGTGATCGTTATATTTATAAAATCTGGAAATTCTATTTGATCATGATCATCTTGAATTATTGTTGATCTTTAATTTCATTATGTGCCCGCCTAGCTAGCCGGTATGTATAGCTTCTCCTAGTTTTAGGGATGATTTAGGAGTTGTGTGACAATAATTCACGCTAGATCATTGTGTATTTGTGAACGCCAGTGACTGAGTTAGGGATAGCCAGTTGCCTAGTGCTTGATCGGTAGAGCTTCATTGGCTTTGAAACATATTCCAAAAAATCTGGAGTTCCGGGAGGATCCCGCTGATAATACTGCATGAGATTGACGGATCAAAAGAATTGCTGGAGCATCTTTATAAACAATTACAGAAGTCTTAACCTGTGTCTGTTTCCATTCTGTTTTCTCTGTCGTAATCATTTACTGCTTTTGCATATCTTTTGTTTCAACATTTTAAAAACTCAATCAATTTAACCAAACTTTTGAAATCACTAAAAAGGCAAATTAAATCAATAGAGGTAGGCATTTCAAGACCCTGTGGATACGATAAATACTTATCACTTGCTGCTAGATTGTGTATACTTGCACAGTATTCTGGAGTTAATTTATCTCATATTTTTAACCACTTCAGAATTGCAACAGTGCTCAACACCAAGAAGATCAACCCGGAGCAAGCATGCACGGAACAAGAGGAGCGAGACCCACGGGTTTCTCGCTAGCGGTTGTGGACCAAAGAACCACTGCTCAAACTCCTTCTTCCTCCACAATGTCGGCCACCTCGAGGGAGAATCCAAGTAGTTCTCGTCCAAGAAGGTCCACACGCATCGATTCCCTCCACAAAACCCATAAACCCGCGGGCCAACAATTGAGAAAACGCTCTAGGGAATGGTTTGCGATGATTCGGGAGATGGGAGCCCAAAGACGTGCGACACTAGAAGAAGAAGAAGCCCGATTGTGTGATGCTAAAGAAGCCGCCAAAGTGAGAGTGAGCTATCAGCAAAGAGAGACTCTAACGGGTAAGGTTTCTAACTCTTCTGCTAACCCAACTTCTTCTTGCAGGGACAAGACGTTCGTGACTTACAGTGCAAGAAAGAAGTAATCAAAGAAGGCTGCACTTGAAAAGCCTCTGATCATCGAGCCCCTCAAAGTAGCTAGAATGCTGCCGGATGTGTTCGAATAGATGATCCGACGGGCCGTTTCACAAGCCCTCATTATTGTCGAAGGTTATAGGGTTGAGGAAGACACACTCAAGGAGATAAGGGCTGAAAAAGAGATGGAAAATCAGAGTATGAGGGAAGAAGACGAGTTTGCAAGAAAAAGGGACTTGGAAGAGGAAAAGGAAGCTGAGAAAAAGTAG

mRNA sequence

ATGGTTGTTACACACGGATGGAGCACACCGAAGCCCACTGTTGATCAACTAGAATGGGAGTTCTACGCCAACATCGATGAAAATGAAGGATTCTTGGTTATTGTTCGTAGAGTTGTTGTCAACTGGAGCCTTGGAGTGATTAATTCTTTATTTAATTTGCAAGACTTCTCCCACGCTGTTTTCAATGAAATATTAGTTGCTTCCTCAAACGAGCAACTGAATGCCCAGTGGAAGTTGTCTAGGACGAAGGCAAGAACATTCCAGTCAGCATACTTGAAGAGTGAGGCTACTACTTGGCTCGACTTTATCAAGAAGAGATTATTGCTTACAGCGTACGCCTCCACTATCCCCCGTGATCGGGTGCACTTGAAGCAGTGCTTGGTTTTGCAGGATGCTCAGAATTGCAACAGTGCTCAACACCAAGAAGATCAACCCGGAGCAAGCATGCACGGAACAAGAGGAGCGAGACCCACGGGTTTCTCGCTAGCGGTTGTGGACCAAAGAACCACTGCTCAAACTCCTTCTTCCTCCACAATGTCGGCCACCTCGAGGGAGAATCCAAGTAGTTCTCGTCCAAGAAGGTCCACACGCATCGATTCCCTCCACAAAACCCATAAACCCGCGGGCCAACAATTGAGAAAACGCTCTAGGGAATGGTTTGCGATGATTCGGGAGATGGGAGCCCAAAGACGTGCGACACTAGAAGAAGAAGAAGCCCGATTGTGTGATGCTAAAGAAGCCGCCAAAGTGAGAGTGAGCTATCAGCAAAGAGAGACTCTAACGGGTAAGGTTTCTAACTCTTCTGCTAACCCAACTTCTTCTTGCAGGGACAAGACGTTCGTGACTTACAGTGCAAGAAAGAAGGTTGAGGAAGACACACTCAAGGAGATAAGGGCTGAAAAAGAGATGGAAAATCAGAGTATGAGGGAAGAAGACGAGTTTGCAAGAAAAAGGGACTTGGAAGAGGAAAAGGAAGCTGAGAAAAAGTAG

Coding sequence (CDS)

ATGGTTGTTACACACGGATGGAGCACACCGAAGCCCACTGTTGATCAACTAGAATGGGAGTTCTACGCCAACATCGATGAAAATGAAGGATTCTTGGTTATTGTTCGTAGAGTTGTTGTCAACTGGAGCCTTGGAGTGATTAATTCTTTATTTAATTTGCAAGACTTCTCCCACGCTGTTTTCAATGAAATATTAGTTGCTTCCTCAAACGAGCAACTGAATGCCCAGTGGAAGTTGTCTAGGACGAAGGCAAGAACATTCCAGTCAGCATACTTGAAGAGTGAGGCTACTACTTGGCTCGACTTTATCAAGAAGAGATTATTGCTTACAGCGTACGCCTCCACTATCCCCCGTGATCGGGTGCACTTGAAGCAGTGCTTGGTTTTGCAGGATGCTCAGAATTGCAACAGTGCTCAACACCAAGAAGATCAACCCGGAGCAAGCATGCACGGAACAAGAGGAGCGAGACCCACGGGTTTCTCGCTAGCGGTTGTGGACCAAAGAACCACTGCTCAAACTCCTTCTTCCTCCACAATGTCGGCCACCTCGAGGGAGAATCCAAGTAGTTCTCGTCCAAGAAGGTCCACACGCATCGATTCCCTCCACAAAACCCATAAACCCGCGGGCCAACAATTGAGAAAACGCTCTAGGGAATGGTTTGCGATGATTCGGGAGATGGGAGCCCAAAGACGTGCGACACTAGAAGAAGAAGAAGCCCGATTGTGTGATGCTAAAGAAGCCGCCAAAGTGAGAGTGAGCTATCAGCAAAGAGAGACTCTAACGGGTAAGGTTTCTAACTCTTCTGCTAACCCAACTTCTTCTTGCAGGGACAAGACGTTCGTGACTTACAGTGCAAGAAAGAAGGTTGAGGAAGACACACTCAAGGAGATAAGGGCTGAAAAAGAGATGGAAAATCAGAGTATGAGGGAAGAAGACGAGTTTGCAAGAAAAAGGGACTTGGAAGAGGAAAAGGAAGCTGAGAAAAAGTAG

Protein sequence

MVVTHGWSTPKPTVDQLEWEFYANIDENEGFLVIVRRVVVNWSLGVINSLFNLQDFSHAVFNEILVASSNEQLNAQWKLSRTKARTFQSAYLKSEATTWLDFIKKRLLLTAYASTIPRDRVHLKQCLVLQDAQNCNSAQHQEDQPGASMHGTRGARPTGFSLAVVDQRTTAQTPSSSTMSATSRENPSSSRPRRSTRIDSLHKTHKPAGQQLRKRSREWFAMIREMGAQRRATLEEEEARLCDAKEAAKVRVSYQQRETLTGKVSNSSANPTSSCRDKTFVTYSARKKVEEDTLKEIRAEKEMENQSMREEDEFARKRDLEEEKEAEKK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 291..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..189

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg026939.1Spg026939.1mRNA