Spg026888 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg026888
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold13: 26456051 .. 26458622 (-)
RNA-Seq ExpressionSpg026888
SyntenySpg026888
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAAAGAAGAAAGGAAGCGGAAGACTTCCTTGCTGCTTTTGAGCTACTCCACAAGGCTCAAAGTGAGGCTGAAATGCTGCAAGGAAGAGAAGAAGAGGCCCATCAGAGGCCAAATGAAAAAAAATTCTGAAAAAGAAAAAGAAAGAGAAGTAGAGGATGAAGCCGAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCACGAAGAGGCCACTGAAGCACAGCCAGCTGATGAGGTTTTCGAACCTCTATTCAAAGATGACCCACCAGCAGCTGATAGCACATCTGTTGGGTTTTATGCCCTACAACTCGTAGATAGTGAATGTAAACAAATTTTATACTTGTGTTTAATAAAGTGTTATTTAGTTTCTGCAATAAAATGTTATTGTTAAATATTGCACTATTTGACCCAAATCCAATAAACTAAGATCCAAGGTTGTTTGTATGTAACTTGAACTAGTATGTGGGGACATACGGGGATCGATGTTCAAGTAACAACCTAAAAGGTCTATAGTACAAGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATACGACCCGCTTTGAATTTGATACAGATGTATTGATCCAAAGTTTCCATGTAGTAGACATGCGAGTGGAGGTATCCTATGCAATGAGTTTGCATAAGACCGGACTGCGAAATAGTAACCGCTAGCTATAACACCGTTAACTGGTTAGGTTTCTATTTCACTAGGATGACCTAGGCAACTTAGTCTAAATCCTGAGTGGATTATGGACTTCTGTTCACGAGGGATTGTTCTTTGATTTGTATGGGTGAGAGTGGCCAGTACGCAGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGTTGGGAACATAATCACACAAGATGAAATTCACTCCTTCCCGACCTTTGAGGAAGTAGATGAGTGTTCCCTTAAGTGGTGTCTCCGGGTCTTGAACAAAGGGCCTTACCCTCTCACTGGCCCGAGAGGGGTTTTCTGTTTGATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGTACTGGTACTTAAGGAAGTAGAGGTAACTCAGGGGTAAAACGATAATTTGACCCAACTGGAGTTACGAACACTCGTGAAGGACTAACTTGTTGTTATTGGTCGATATCCGTGGACACAGAAATATTCTGACGTGAGAAGAGTGCAGCTGTGGGTCTTTAGTGGAGTGACCCACAGTTAACGAATGGAGACTAACTTGGTTAATGAATTTAGCCAATTAGTCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCACTGGTAGCTCGTAAAGAGACTTGAAGCAAATAAATATAAATTGTAAATTGAAAGTGTTCAATTTATTTGGGAAATCATATAATGTATATTGATGCATTATAATATAAAGTTTATGAAACTTTATAATATAATTTTTGAATTAAATTTCAAAAATTAATTCTTGAGAGAAAATATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGATTCATATTAATTTTAATTTTAATAAAATCCCTAAGATTAAATATATGATATTTAATTGGGTAATTGATTAATTATGGAACTAATTAATTATGGAATTAAAATTAGAGACATTTTCCTATTAGGAAAAGGTCTTCCTTTTCCTATTAGGAAAAATGTCTTGGCCTTTACTATATATAGAACCCCTGGGGTGGGGTGAAAGACATCCCATTGTCTCTCCTTCTCTCAGAGTTCTCTCCCAAAAGACTCCCACAAGTCTCCTGCTTCAAGAAGTCTTAGAGTCATACCGGTGTAGCCATAGTGGTGGTGTTCGCACTAGTTCGTGATTATTTCACAAGCAATTTGTGAATTTAATCTGAGTCGTCAACGAGAGTAAGTAATTTGTTACTATATAAATTAGATTTAGATCTAATATTTTTGTATGCTTAGCCTTAATATAAATCTAGAATAGTTCTAAGTTTATTGCCTATGTATTGGTATTTTAGATTAAACAAAAATTAATTACGAATCGGTCCCAATCACGCTTTCGCTTTACGGAATTACGGAATTCCAATCCTTCAATTGGAACTAGAGCTGATCTTAGATCTAATTTTGTTTCTCTAAAATTTGCATTGGCTATTGGTGGGATTGATTAATGCATAATGTATGTATGGTTTGCATTGAACTGTTTAGGTTAATTTTATGGCCATAGATTTTACTGTTTTTTATTTGATTTGATCATGTAAGGGCCCGGTGTTTCGGGTATTTTATGTAAAATCGAGTCCTTTGTAAGTCCGGATCTAGATTAAGTTTTTTATGAGATGAAAAACGTTGAATTCACGACGAGAAGAAGCCGCAGCATCGCGACGCTGTCACGATGTGCGGTGCGAAGACATGTTTCAGGTGGTTCAAGGTAGCTGGCGGTCTGGTTCGCATGGTCCATCTGGGCTGGGATCGATTTGGTCCGGTTCAGCTGGAATTTGGCTCGGTTCGTGGTTTTTGTAGCTTTTTCGAAGTGGTTCGGGTCGGTTCGGGCAGTCTAAACCAGTATTTGGAGTTGCAGAAGGACTTTTAG

mRNA sequence

ATGAGAAAAGAAGAAAGGAAGCGGAAGACTTCCTTGCTGCTTTTGAGCTACTCCACAAGGCTCAAAGTGAGGCTGAAATGCTGCAAGGAAGAGAAGAAGAGGCCCATCAGAGGCCAAATGAAAAAAAATTCTGAAAAAGAAAAAGAAAGAGAAGTAGAGGATGAAGCCGAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCACGAAGAGGCCACTGAAGCACAGCCAGCTGATGAGGTTTTCGAACCTCTATTCAAAGATGACCCACCAGCAGCTGATAGCACATCTGTTGGGTTTTATGCCCTACAACTCGTAGATAGTGAATGGCCTTACCCTCTCACTGGCCCGAGAGGGGTTTTCTGTTTGATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGTACTGGTCCATTAGGTCCCACTGA

Coding sequence (CDS)

ATGAGAAAAGAAGAAAGGAAGCGGAAGACTTCCTTGCTGCTTTTGAGCTACTCCACAAGGCTCAAAGTGAGGCTGAAATGCTGCAAGGAAGAGAAGAAGAGGCCCATCAGAGGCCAAATGAAAAAAAATTCTGAAAAAGAAAAAGAAAGAGAAGTAGAGGATGAAGCCGAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCACGAAGAGGCCACTGAAGCACAGCCAGCTGATGAGGTTTTCGAACCTCTATTCAAAGATGACCCACCAGCAGCTGATAGCACATCTGTTGGGTTTTATGCCCTACAACTCGTAGATAGTGAATGGCCTTACCCTCTCACTGGCCCGAGAGGGGTTTTCTGTTTGATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGTACTGGTCCATTAGGTCCCACTGA

Protein sequence

MRKEERKRKTSLLLLSYSTRLKVRLKCCKEEKKRPIRGQMKKNSEKEKEREVEDEAENATASGPHSEEGHEEATEAQPADEVFEPLFKDDPPAADSTSVGFYALQLVDSEWPYPLTGPRGVFCLMVGPQTGCSLEEYWSIRSH
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 42..62
NoneNo IPR availableCOILSCoilCoilcoord: 143..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg026888.1Spg026888.1mRNA