Spg026573 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg026573
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	AA_kinase domain-containing protein
Location	scaffold6: 18407622 .. 18408730 (-)
RNA-Seq Expression	Spg026573
Synteny	Spg026573

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCACAAAAGGATCTAGGAGAGTTACAACTTCTTCATCCTCTGCACCCTTTGATAGGCAAAAATTCATTAGCAAGGATGTTGAAGATGTATATAACACTTATGTGGTAAGTAGGGGAGTGATTCCTGAGAGAGGGCTAGTCTCAAGTGCCCAAAACCAACCTGAGCTCACCCATAGTATAGCTGAGAGAGGTTGGGTTAGGTTCACTAGGCACCCTGAGGCTGCTGTAGTCCCTATAGTTTGGGAATTTTACGCTAACATGACGGAAGGATCCACTACTTCCTTTGTTAGGGGTAAAATGATCCCTTTCGACTCGGCCTCCATTAACCAATTCTATGGCCTTCCCAATATCGATCGTGATGGGTACAATGATTACGCAAGTAATCACTTTGATGCCCATCAAATTATAAAACATTTATGTAGGTCGGGGGCAGTTTGGTTAGTGAGAAGGGGTGAAACAATAAACTTTAAATCCTCTGACCTGACAGTGGATAACAGAGCCTGGCATAGTTTTCTGTGTGCCAAACTCATGCCTGTGATGCATCTTAGTGATGTAACCAGGGAGAGAGCGACTCTGTTATTCACTATAGCGACCAGCCGTAGTGTAGACGTAGGGAAAGTTATATATGCTTTCATGCGCCGGATTCGCAGAGGAGCAACCACAGTAGGTTTAGGGCACCCTTCCCTCATCACAGCACTTTGCAGAGCCGCTGGGTCGTGTGGGACCCCCGTGAGGAGATTAGCCATCCTGCAGCTGCGATTGATGGGAACTTCATCACGATTAGATTTAGGAAGCCTGGACCTAGGATAGCCCGTCCCCCACCTCCACCCCAACAGGAAGAGCCAGAAAATGAGCCCCTAGAACAGGAAGGGCAACATCACGACAATCATCCCCCTCTCACGCTTGAGGCGTTAGATGAAAGGATGAATCAGATGAGACTCGCGCAGCTGCGCTATAACGAGAGCCAGCAGCTTAGAGAGGCTCGACATTTCAGGCGTTTTGAGGCACAGTTCGCTTACATTCAACAGTATATAGTCGCCTCAGCGCCTGGACAGCCACCTCCTCCGCCGCTACCGCCTTACGAGTCTCTTGAGGATGAGGAGTGA

mRNA sequence

ATGAGCACAAAAGGATCTAGGAGAGTTACAACTTCTTCATCCTCTGCACCCTTTGATAGGCAAAAATTCATTAGCAAGGATGTTGAAGATGTATATAACACTTATGTGGTAAGTAGGGGAGTGATTCCTGAGAGAGGGCTAGTCTCAAGTGCCCAAAACCAACCTGAGCTCACCCATAGTATAGCTGAGAGAGGTTGGGTTAGGTTCACTAGGCACCCTGAGGCTGCTGTAGTCCCTATAGTTTGGGAATTTTACGCTAACATGACGGAAGGATCCACTACTTCCTTTGTTAGGGGTAAAATGATCCCTTTCGACTCGGCCTCCATTAACCAATTCTATGGCCTTCCCAATATCGATCGTGATGGGTACAATGATTACGCAATGGATAACAGAGCCTGGCATAGTTTTCTGTGTGCCAAACTCATGCCTGTGATGCATCTTAGTGATAGCCGCTGGGTCGTGTGGGACCCCCGTGAGGAGATTAGCCATCCTGCAGCTGCGATTGATGGGAACTTCATCACGATTAGATTTAGGAAGCCTGGACCTAGGATAGCCCGTCCCCCACCTCCACCCCAACAGGAAGAGCCAGAAAATGAGCCCCTAGAACAGGAAGGGCAACATCACGACAATCATCCCCCTCTCACGCTTGAGGCGTTAGATGAAAGGATGAATCAGATGAGACTCGCGCAGCTGCGCTATAACGAGAGCCAGCAGCTTAGAGAGGCTCGACATTTCAGGCGTTTTGAGGCACAGTTCGCTTACATTCAACAGTATATAGTCGCCTCAGCGCCTGGACAGCCACCTCCTCCGCCGCTACCGCCTTACGAGTCTCTTGAGGATGAGGAGTGA

Coding sequence (CDS)

ATGAGCACAAAAGGATCTAGGAGAGTTACAACTTCTTCATCCTCTGCACCCTTTGATAGGCAAAAATTCATTAGCAAGGATGTTGAAGATGTATATAACACTTATGTGGTAAGTAGGGGAGTGATTCCTGAGAGAGGGCTAGTCTCAAGTGCCCAAAACCAACCTGAGCTCACCCATAGTATAGCTGAGAGAGGTTGGGTTAGGTTCACTAGGCACCCTGAGGCTGCTGTAGTCCCTATAGTTTGGGAATTTTACGCTAACATGACGGAAGGATCCACTACTTCCTTTGTTAGGGGTAAAATGATCCCTTTCGACTCGGCCTCCATTAACCAATTCTATGGCCTTCCCAATATCGATCGTGATGGGTACAATGATTACGCAATGGATAACAGAGCCTGGCATAGTTTTCTGTGTGCCAAACTCATGCCTGTGATGCATCTTAGTGATAGCCGCTGGGTCGTGTGGGACCCCCGTGAGGAGATTAGCCATCCTGCAGCTGCGATTGATGGGAACTTCATCACGATTAGATTTAGGAAGCCTGGACCTAGGATAGCCCGTCCCCCACCTCCACCCCAACAGGAAGAGCCAGAAAATGAGCCCCTAGAACAGGAAGGGCAACATCACGACAATCATCCCCCTCTCACGCTTGAGGCGTTAGATGAAAGGATGAATCAGATGAGACTCGCGCAGCTGCGCTATAACGAGAGCCAGCAGCTTAGAGAGGCTCGACATTTCAGGCGTTTTGAGGCACAGTTCGCTTACATTCAACAGTATATAGTCGCCTCAGCGCCTGGACAGCCACCTCCTCCGCCGCTACCGCCTTACGAGTCTCTTGAGGATGAGGAGTGA

Protein sequence

MSTKGSRRVTTSSSSAPFDRQKFISKDVEDVYNTYVVSRGVIPERGLVSSAQNQPELTHSIAERGWVRFTRHPEAAVVPIVWEFYANMTEGSTTSFVRGKMIPFDSASINQFYGLPNIDRDGYNDYAMDNRAWHSFLCAKLMPVMHLSDSRWVVWDPREEISHPAAAIDGNFITIRFRKPGPRIARPPPPPQQEEPENEPLEQEGQHHDNHPPLTLEALDERMNQMRLAQLRYNESQQLREARHFRRFEAQFAYIQQYIVASAPGQPPPPPLPPYESLEDEE

Homology

[Close]

BLAST of Spg026573 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 3.8e-31
Identity = 79/184 (42.93%), Postives = 99/184 (53.80%), Query Frame = 0


Query: 1   MSTKGSRRVTTSSSSAPFDRQKFISKDVEDVYNTYVVSRGVIPERGLVSSAQNQPELTHS 60
           MS+K  R  +  SS   F+R KFISKD  D Y  +VV   VIPERGL     +QP+L  +
Sbjct: 2   MSSKTKRARSALSSEGAFNRHKFISKDAADGYKKHVVKSSVIPERGLAPCEVHQPQLYQN 61

Query: 61  IAERGWVRFTRHPEAAVVPIVWEFYANMTEGSTTSFVRGKMIPFDSASINQFYGLPNIDR 120
           I +RGW  F + PE AVV IV EFYANM EGS+ SFVRG+ + FD  +IN++Y LPN +R
Sbjct: 62  IMQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121

Query: 121 DGYNDYA------------------------------------MDNRAWHSFLCAKLMPV 149
           D Y  YA                                    + N+ WH F+CAKL+PV
Sbjct: 122 DEYAIYASEHVDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQVWHKFICAKLLPV 181

[Close]

BLAST of Spg026573 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 8.5e-31
Identity = 78/184 (42.39%), Postives = 99/184 (53.80%), Query Frame = 0


Query: 1   MSTKGSRRVTTSSSSAPFDRQKFISKDVEDVYNTYVVSRGVIPERGLVSSAQNQPELTHS 60
           MS+K  R  +  SS   F+R KFISKD  D Y   VV   VIPERGL     +QP+L  +
Sbjct: 2   MSSKTKRARSALSSEGAFNRHKFISKDAADRYRKLVVKSSVIPERGLAPCEVHQPQLFQN 61

Query: 61  IAERGWVRFTRHPEAAVVPIVWEFYANMTEGSTTSFVRGKMIPFDSASINQFYGLPNIDR 120
           I +RGW  F + PE AV+ IV EFYANM EGS+ SFVRG+ + FD  +IN++Y LPN +R
Sbjct: 62  IMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121

Query: 121 DGYNDYA------------------------------------MDNRAWHSFLCAKLMPV 149
           D Y+ YA                                    + N+ WH F+CAKL+PV
Sbjct: 122 DEYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQVWHKFICAKLLPV 181

[Close]

BLAST of Spg026573 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-16
Identity = 50/122 (40.98%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 63  ERGWVRFTRHPEAAVVPIVWEFYANMTEGSTTSFVRGKMIPFDSASINQFYGLPNIDRDG 122
           +RGW  F + PE AVV IV EFYANM EGS+ SFVRG+ + FD  +IN++Y LPN +RD 
Sbjct: 2   QRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDE 61

Query: 123 YNDYA------------------------------------MDNRAWHSFLCAKLMPVMH 149
           Y  YA                                    + N+ WH F+CAKL+PV H
Sbjct: 62  YAIYASEHVDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAH 121

[Close]

BLAST of Spg026573 vs. NCBI nr
Match: EOY13933.1 (Uncharacterized protein TCM_032752 [Theobroma cacao])

HSP 1 Score: 92.4 bits (228), Expect = 6.6e-15
Identity = 50/141 (35.46%), Postives = 75/141 (53.19%), Query Frame = 0


Query: 13  SSSAPFDRQKFISKDVEDVYNTYVVSRGVIPERGLVSSAQNQPELTHSIAERGWVRFTRH 72
           SSS  FDR KFIS +    Y T ++++  IPERG+        E+   I +R W +F   
Sbjct: 9   SSSGSFDRSKFISAEASTRYYTSLINKVPIPERGIEIPILPYKEINDLIRDRYWHQFCHQ 68

Query: 73  PEAAVVPIVWEFYANMTEG-STTSFVRGKMIPFDSASINQFYGLPNIDRDGYNDYAMDNR 132
           P   VV +V EFYA + E     +FVRGK +PF S +IN+    PNI+ D Y  Y  D++
Sbjct: 69  PNVVVVLVVREFYATVVEHVDGVAFVRGKHVPFHSQAINELLRTPNIENDEYGQYLGDHQ 128

Query: 133 AWHSFLCAKLMPVMHLSDSRW 153
                 C +++  + +  ++W
Sbjct: 129 D-----CNEIISTLCIEGAQW 144

[Close]

BLAST of Spg026573 vs. NCBI nr
Match: CAN60970.1 (hypothetical protein VITISV_026408 [Vitis vinifera])

HSP 1 Score: 89.0 bits (219), Expect = 7.2e-14
Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 1    MSTKGSRRVTTSSSSAPFDRQKFISKDVEDVYNTYVVSRGVIPERGLVSSAQNQPELTHS 60
            M+  GS++     S   FD+ KF+S++  + Y   V ++ +I ERGL  +  N P  T +
Sbjct: 1136 MNAFGSKK-RKGKSVIQFDKTKFVSENAXNRYYDXVSNQNLIXERGLCVTGINWPTTTAN 1195

Query: 61   IAERGWVRFTRHPEAAVVPIVWEFYANMTE-GSTTSFVRGKMIPFDSASINQFYGLPNID 120
            I ER W  F   P+ A+VP+V EFYAN+ E      FVRGK + F   +IN F+ LP+I+
Sbjct: 1196 IRERKWDNFCAQPQVAIVPVVREFYANVPEHHHRXVFVRGKQVGFSGHAINVFFNLPDIE 1255

Query: 121  RDGYNDY 127
             D Y  +
Sbjct: 1256 NDDYTAF 1261

[Close]

BLAST of Spg026573 vs. ExPASy TrEMBL
Match: A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-31
Identity = 79/184 (42.93%), Postives = 99/184 (53.80%), Query Frame = 0


Query: 1   MSTKGSRRVTTSSSSAPFDRQKFISKDVEDVYNTYVVSRGVIPERGLVSSAQNQPELTHS 60
           MS+K  R  +  SS   F+R KFISKD  D Y  +VV   VIPERGL     +QP+L  +
Sbjct: 2   MSSKTKRARSALSSEGAFNRHKFISKDAADGYKKHVVKSSVIPERGLAPCEVHQPQLYQN 61

Query: 61  IAERGWVRFTRHPEAAVVPIVWEFYANMTEGSTTSFVRGKMIPFDSASINQFYGLPNIDR 120
           I +RGW  F + PE AVV IV EFYANM EGS+ SFVRG+ + FD  +IN++Y LPN +R
Sbjct: 62  IMQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121

Query: 121 DGYNDYA------------------------------------MDNRAWHSFLCAKLMPV 149
           D Y  YA                                    + N+ WH F+CAKL+PV
Sbjct: 122 DEYAIYASEHVDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQVWHKFICAKLLPV 181

[Close]

BLAST of Spg026573 vs. ExPASy TrEMBL
Match: A0A0A0KER1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.1e-31
Identity = 78/184 (42.39%), Postives = 99/184 (53.80%), Query Frame = 0


Query: 1   MSTKGSRRVTTSSSSAPFDRQKFISKDVEDVYNTYVVSRGVIPERGLVSSAQNQPELTHS 60
           MS+K  R  +  SS   F+R KFISKD  D Y   VV   VIPERGL     +QP+L  +
Sbjct: 2   MSSKTKRARSALSSEGAFNRHKFISKDAADRYRKLVVKSSVIPERGLAPCEVHQPQLFQN 61

Query: 61  IAERGWVRFTRHPEAAVVPIVWEFYANMTEGSTTSFVRGKMIPFDSASINQFYGLPNIDR 120
           I +RGW  F + PE AV+ IV EFYANM EGS+ SFVRG+ + FD  +IN++Y LPN +R
Sbjct: 62  IMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121

Query: 121 DGYNDYA------------------------------------MDNRAWHSFLCAKLMPV 149
           D Y+ YA                                    + N+ WH F+CAKL+PV
Sbjct: 122 DEYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQVWHKFICAKLLPV 181

[Close]

BLAST of Spg026573 vs. ExPASy TrEMBL
Match: A0A0A0KNI1 (AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.2e-27
Identity = 71/155 (45.81%), Postives = 92/155 (59.35%), Query Frame = 0


Query: 1   MSTKGSRRVTTSSSSAPFDRQKFISKDVEDVYNTYVVSRGVIPERGLVSSAQNQPELTHS 60
           MS+K  R  +  SS   F+R KFISKD  D Y   VV     PERGL     +QP+L  +
Sbjct: 2   MSSKTKRARSALSSEGAFNRHKFISKDAADRYRKLVVKSSTKPERGLAPCEVHQPQLFQN 61

Query: 61  IAERGWVRFTRHPEAAVVPIVWEFYANMTEGSTTSFVRGKMIPFDSASINQFYGLPNIDR 120
           I +RGW  F + PE AV+ IV EFYANM EGS+ SFVRG+ + FD  +IN++Y LPN +R
Sbjct: 62  IMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121

Query: 121 DGYNDYAMDNRAWHSF---LCAK----LMPVMHLS 149
           D Y+ YA ++   H     LC      L+P+ H S
Sbjct: 122 DEYDIYASEHVDVHQIIRELCQPGAEWLLPMAHTS 156

[Close]

BLAST of Spg026573 vs. ExPASy TrEMBL
Match: A0A1S3C7Y0 (uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.6e-17
Identity = 50/122 (40.98%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 63  ERGWVRFTRHPEAAVVPIVWEFYANMTEGSTTSFVRGKMIPFDSASINQFYGLPNIDRDG 122
           +RGW  F + PE AVV IV EFYANM EGS+ SFVRG+ + FD  +IN++Y LPN +RD 
Sbjct: 2   QRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDE 61

Query: 123 YNDYA------------------------------------MDNRAWHSFLCAKLMPVMH 149
           Y  YA                                    + N+ WH F+CAKL+PV H
Sbjct: 62  YAIYASEHVDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQVWHKFICAKLLPVAH 121

[Close]

BLAST of Spg026573 vs. ExPASy TrEMBL
Match: A5B5G7 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_026408 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.5e-14
Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 1    MSTKGSRRVTTSSSSAPFDRQKFISKDVEDVYNTYVVSRGVIPERGLVSSAQNQPELTHS 60
            M+  GS++     S   FD+ KF+S++  + Y   V ++ +I ERGL  +  N P  T +
Sbjct: 1136 MNAFGSKK-RKGKSVIQFDKTKFVSENAXNRYYDXVSNQNLIXERGLCVTGINWPTTTAN 1195

Query: 61   IAERGWVRFTRHPEAAVVPIVWEFYANMTE-GSTTSFVRGKMIPFDSASINQFYGLPNID 120
            I ER W  F   P+ A+VP+V EFYAN+ E      FVRGK + F   +IN F+ LP+I+
Sbjct: 1196 IRERKWDNFCAQPQVAIVPVVREFYANVPEHHHRXVFVRGKQVGFSGHAINVFFNLPDIE 1255

Query: 121  RDGYNDY 127
             D Y  +
Sbjct: 1256 NDDYTAF 1261

The following BLAST results are available for this feature:

BLAST of Spg026573 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033353.1	3.8e-31	42.93	putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]...	[more]
KGN46897.1	8.5e-31	42.39	hypothetical protein Csa_020731 [Cucumis sativus]	[more]
XP_008458668.1	1.6e-16	40.98	PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo]	[more]
EOY13933.1	6.6e-15	35.46	Uncharacterized protein TCM_032752 [Theobroma cacao]	[more]
CAN60970.1	7.2e-14	38.58	hypothetical protein VITISV_026408 [Vitis vinifera]	[more]

BLAST of Spg026573 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg026573 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BBY3	1.9e-31	42.93	Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuw...	[more]
A0A0A0KER1	4.1e-31	42.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1	[more]
A0A0A0KNI1	6.2e-27	45.81	AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 P...	[more]
A0A1S3C7Y0	7.6e-17	40.98	uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=...	[more]
A5B5G7	3.5e-14	38.58	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]

BLAST of Spg026573 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg026573.1	Spg026573.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
molecular_function	GO:0005488	binding
molecular_function	GO:0016301	kinase activity