Spg026571 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGTCTCCAGCGCCACCTACATGTTCGGCCTCTACTCCTCCGACATCAAATCCTCCTTGGGCTATGACCAAGCCACCCTTAATCTGCTCACCTTCTTCAAGGATTTAGGCGGCAATGTCGGCGTCATCGGCGGCCTCATCAACGAGGTCGCCCCGCCGTGGGTGGTTCTTCTAATCGGCGCCGTTATGAACCTCTTCGGCTACATGATGATTTGGCTGGCCGTAACCAGTCGGATCCCGAAGCCCCAGATCTGGCATATGTGTCTCTACATTTGCATTGGAGCTAATTCTCAGACGTTTGCGAATACAGGGGCTCTCGTCACTTGCGTCAAGAACTTCCCGAAGAATGGCGACAACGTTTTGGGCCTTTTGAAGGGCTTCATCGGATTGAGCGGCGTCATTTTGACCCAGCTTTACCATGCGTTTTACGACAACTGTAAAAGAAATTACCTCAGAATTATGTTGTAA ATGTCCGTCTCCAGCGCCACCTACATGTTCGGCCTCTACTCCTCCGACATCAAATCCTCCTTGGGCTATGACCAAGCCACCCTTAATCTGCTCACCTTCTTCAAGGATTTAGGCGGCAATGTCGGCGTCATCGGCGGCCTCATCAACGAGGTCGCCCCGCCGTGGGTGGTTCTTCTAATCGGCGCCGTTATGAACCTCTTCGGCTACATGATGATTTGGCTGGCCGTAACCAGTCGGATCCCGAAGCCCCAGATCTGGCATATGTGTCTCTACATTTGCATTGGAGCTAATTCTCAGACGTTTGCGAATACAGGGGCTCTCGTCACTTGCGTCAAGAACTTCCCGAAGAATGGCGACAACGTTTTGGGCCTTTTGAAGGGCTTCATCGGATTGAGCGGCGTCATTTTGACCCAGCTTTACCATGCGTTTTACGACAACTGTAAAAGAAATTACCTCAGAATTATGTTGTAA ATGTCCGTCTCCAGCGCCACCTACATGTTCGGCCTCTACTCCTCCGACATCAAATCCTCCTTGGGCTATGACCAAGCCACCCTTAATCTGCTCACCTTCTTCAAGGATTTAGGCGGCAATGTCGGCGTCATCGGCGGCCTCATCAACGAGGTCGCCCCGCCGTGGGTGGTTCTTCTAATCGGCGCCGTTATGAACCTCTTCGGCTACATGATGATTTGGCTGGCCGTAACCAGTCGGATCCCGAAGCCCCAGATCTGGCATATGTGTCTCTACATTTGCATTGGAGCTAATTCTCAGACGTTTGCGAATACAGGGGCTCTCGTCACTTGCGTCAAGAACTTCCCGAAGAATGGCGACAACGTTTTGGGCCTTTTGAAGGGCTTCATCGGATTGAGCGGCGTCATTTTGACCCAGCTTTACCATGCGTTTTACGACAACTGTAAAAGAAATTACCTCAGAATTATGTTGTAA MSVSSATYMFGLYSSDIKSSLGYDQATLNLLTFFKDLGGNVGVIGGLINEVAPPWVVLLIGAVMNLFGYMMIWLAVTSRIPKPQIWHMCLYICIGANSQTFANTGALVTCVKNFPKNGDNVLGLLKGFIGLSGVILTQLYHAFYDNCKRNYLRIML Homology
BLAST of Spg026571 vs. NCBI nr
Match: XP_023005202.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucurbita maxima]) HSP 1 Score: 270.8 bits (691), Expect = 7.4e-69 Identity = 132/155 (85.16%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of Spg026571 vs. NCBI nr
Match: XP_023540992.1 (protein NUCLEAR FUSION DEFECTIVE 4-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023540993.1 protein NUCLEAR FUSION DEFECTIVE 4-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023540994.1 protein NUCLEAR FUSION DEFECTIVE 4-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 270.8 bits (691), Expect = 7.4e-69 Identity = 132/155 (85.16%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of Spg026571 vs. NCBI nr
Match: KAG6596491.1 (Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 270.8 bits (691), Expect = 7.4e-69 Identity = 132/155 (85.16%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of Spg026571 vs. NCBI nr
Match: XP_023522337.1 (protein NUCLEAR FUSION DEFECTIVE 4-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 270.8 bits (691), Expect = 7.4e-69 Identity = 132/155 (85.16%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of Spg026571 vs. NCBI nr
Match: XP_022947808.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucurbita moschata]) HSP 1 Score: 270.8 bits (691), Expect = 7.4e-69 Identity = 132/155 (85.16%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of Spg026571 vs. ExPASy TrEMBL
Match: A0A6J1KSH4 (protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498302 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 3.6e-69 Identity = 132/155 (85.16%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of Spg026571 vs. ExPASy TrEMBL
Match: A0A6J1G7M8 (protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451560 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 3.6e-69 Identity = 132/155 (85.16%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of Spg026571 vs. ExPASy TrEMBL
Match: A0A5A7TKH4 (Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002830 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 2.2e-66 Identity = 126/155 (81.29%), Postives = 141/155 (90.97%), Query Frame = 0
BLAST of Spg026571 vs. ExPASy TrEMBL
Match: A0A1S4DUK0 (uncharacterized protein LOC103487133 OS=Cucumis melo OX=3656 GN=LOC103487133 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 2.2e-66 Identity = 126/155 (81.29%), Postives = 141/155 (90.97%), Query Frame = 0
BLAST of Spg026571 vs. ExPASy TrEMBL
Match: A0A0A0LEA4 (Nodulin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G742600 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 4.6e-64 Identity = 125/146 (85.62%), Postives = 132/146 (90.41%), Query Frame = 0
BLAST of Spg026571 vs. TAIR 10
Match: AT2G39210.1 (Major facilitator superfamily protein ) HSP 1 Score: 236.5 bits (602), Expect = 1.4e-62 Identity = 107/144 (74.31%), Postives = 126/144 (87.50%), Query Frame = 0
BLAST of Spg026571 vs. TAIR 10
Match: AT2G28120.1 (Major facilitator superfamily protein ) HSP 1 Score: 213.0 bits (541), Expect = 1.7e-55 Identity = 100/155 (64.52%), Postives = 121/155 (78.06%), Query Frame = 0
BLAST of Spg026571 vs. TAIR 10
Match: AT5G50630.1 (Major facilitator superfamily protein ) HSP 1 Score: 141.4 bits (355), Expect = 6.3e-34 Identity = 69/143 (48.25%), Postives = 99/143 (69.23%), Query Frame = 0
BLAST of Spg026571 vs. TAIR 10
Match: AT5G50520.1 (Major facilitator superfamily protein ) HSP 1 Score: 141.4 bits (355), Expect = 6.3e-34 Identity = 69/143 (48.25%), Postives = 99/143 (69.23%), Query Frame = 0
BLAST of Spg026571 vs. TAIR 10
Match: AT5G14120.1 (Major facilitator superfamily protein ) HSP 1 Score: 140.2 bits (352), Expect = 1.4e-33 Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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