Spg026494 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg026494
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCR4-NOT transcription complex subunit 11
Locationscaffold8: 2223301 .. 2227816 (-)
RNA-Seq ExpressionSpg026494
SyntenySpg026494
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAAACACGATGGTTTGATTTCCACCTCTACCATTATTCAACTAAAAAATACAATTTTTCAAAAAAAAAAAAAAAAAAAAACTATTCGTTTAAACATACTTCTGGTTGAAAAGGAAAACAAAGTAAGCTTATATAAGTGGAAGATTTACAAAAAAGGGGAATTTTGTGCAGAGAGGTGGGCAGGTCTTGGAATCTATCCCAATCGCCATTTGATCGACACGGACCTGCATTGATGTTCACAATCTCGAACAAGGAAATGAAGAAGGGAAGCGTGAAGATGATGAGCCTCACCGTAGATGAATCACGGACGCTCTACTCTTTGCTAGCAGGAGGAGATCACCGCCCCTTTCTGGACATCATCGCCGATTTTGCCGCCAAGATCCCTCGCACTCGTCACTTTATTGCTTGTTATTCCCTCGCTACTCTCTTGGAGGTAGTTCAATCTTCTATCCCTCTTCCCACAACCTTTCTTTCTCTGTCGTAATTTCGATATACTTGGTTGATTTGTTCTGGTTTACGTGTTTACGACCGAGTTTAGGGTTGTAGTCTATCTGCAAATTTTGTTTATTCTGCGCCTTCATTTACCCAGCCTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGGTTTCTCTCTGTTAGCCCGGTTGTCCTCAGCAGATGATTTGAAGCTAGGCATCTTCTCGTTTCACCATTTTTTTTTTGAAAAAACAATTCTAACCTGTAACTACGAGATTCTCTGTCACCAAGCTTGAATACCCACGATGGATGTATTACCTAAATCGATGAAATTGTGGCCGTTGATGCATGTCTCTTTTTCTTGTATGAACCACAGCAGGAGTTATCTTAAATCGTCAATGCTTTTCACTCTGTGCAGTTATTCAACGTGTAGGATTTTTTTCTCATTTTGTTTATTTTTGTCATTTTTAGTTTAGTCCTAGATATCTGGGGTTTTCACTCGTATTTATGATTTTAATTTGCAGTTCTTTTTGAGAATATGACTGTAGCACTATCGATGTTTGGTATTAACCTTTTGTTTTCTTTGTAGTTCTATCATTCGTATGGAAGTTTTTTCTTTTGTTAGGATTTTTTTTTTTGGTTTCTTTTCACATTATTATTATTATCTCTCTTATGTGAACTGTTGAGACGATCAGGACACGGTCTTGATTCCTAATTTCCTACTATAGAATTTTTCTTACATGTGTAGGTAGTGATGGTTAGATTCCTGTATCTTTGATTTGTCTATTTCCATTTGTTTTCTTCTCCTTTGCATGAAATCTTTATATGTCGAAGGCTTGAACCTTTTTTGTCTTTATGGATTGCTGATTAACGGGTCTAAGATGCAGCCAAAGAAGTTGCTCCATGCTTCTCAACGTTTAGTGGGATTTTCTATTCTTCACCAGACATATTCCTCGCAGAAATCTTCTTCTAATCCGTTTATATCTTTTATTGTAAATGTAAGTATGCTACCTTATAACTTGTCACAATATGAGCCATTTTAGAGTTTTTGTTCTCTGTACTATTCAACTAAAAAATTAATGTCATTAAGTTGCATATGGATGTTTTACGATTTGATTCTTGTTAAATGTCAACAGCCTAATCTCATAAAAAAAAAAAAAGCAATTTAACATAGCTGTAAACTATTGAGGAACTTACCTTTGGATTGGAGCCCCTTTTTGTAGCTTTGTAGTTTTTATTAACCTTTTGTTTTGAGCTTTCTTTCTTGTACTGCCCTTGTGTATTATTCTCAATAAACGTTGGTTTCTTTATTAAAAAAAAAACTATATATTTTTTCATAGATTTCTAGTCTCACAAAAAAGGCTCTCATTTTTCTTTGTGCTTTTCCCTTAAGCCTTTGAGGACTAGTCCTCATTTTAGTGTAGTGCTGTTCGTGCTTTTAAAAAAAAGACAGCGGATGAGGTTGCTCCTTTTTCTTTGGCCTCCATTGAGCAGCCCCTTGGACTGAGTGTGGCACTGTTTGCTCTACACTAGTCCTTTATCAGTATCTCAGTGATTGTCCTATTAGAAAGTAAGAAGTACTACTCTTCTCGGAATTCACAAAAGAAGAACCTCTCTTCAAACTAGAAAAGAAAAACGATTCATCAAATTGTGACCAAATTGACCCCCTAGATGACCATATTGTGAATTAACTTCTAAGAGAATTGATCAATTCACACTCCTCTATCAATTATGAAAAAGAAGCCAATAATGAATAGATGAGAGAGCTAAGCCAGTGAGAAAGATGACATCAATGGCTGTGCTCGAGACCTTTGAGTTTTGCTGTAGGTCTTTAGGGGAGGATTTTCTAGGTGGAGTGAAGTAAGGGGATTCGTGGGTGTGATTCAAACGACTTGGATGACAAAGATTGTCAAAGGAAACATAGGAGAAAGACGGTGGATGGATATAGTAAAAAACAGAGACTTGCTTTTTTAGTTTCACCAAGCTGAAGGTTGAAACGGGCTGAAAGTTTCCTTTCTGGGGAGATTCTTGGGTGGATTGTGTTGCTCTATCCTCCATGTTCCCTTTTATTAACACCATAACAACAAAGAAGAAAGCAACCGATGTCCTTGTTGGATTGCTGAGTGACAAACTTGGAACCTGGGGGTTAGAAGACATTTGTTTAATGGAGAGATGGATAATTGGGTTTCCCTCATTGGAAAATTGGACCAGGTACAACTACTAGTTGGAGAAGATCGTCTTAAATGAATCGAAGGATCTTTCACAACAAGTACCTTCTTTGTGTAGATCGGTTTAGTTTGGCTTCTCTCAAGGCTTCATCCTAGTGTTCTCTTTCTAAACATAATTCCAATTATTCTATTCAAGATTTATGTCTTAACAAGCATGTTTTCATTTTTCTTCCTCCCTTCATGAAGTTTGTAATTTTTGAGCTTTAGTCTCTTTTTATTAATTCTTGAAAATTTTCATTTTTTATGTTTTTAAAAGATTGTCTTAAATAGATGGTGGAATCTAATGGGTCCTTTACTCCCAAGTTAGGCTTCTTATCTATTAAGGAGAAGAATCCTAGAACAGTGGCTGTTTTCATTGTGTTAAGGCAACCTGGAAACCAAAAGTCCCCAAAAGGGTGAAAATATTTTTGTGGTCCCTAATGTACACGAGTCTTAACTCTGCAGAGAGGATATAAACGAGATTTCTCCCTTGGATTTTGTCTCCTTTGACACGTGGCCTTTGCAAAAGGTGGGAGGAAAATTTAGATCACCTATTCCTTGACTGCCCTTTCGCCCATGGGGGATTTTTCCAAAGAGCTTGGTCTCTCCTTTTGTTTACTGAATAGAGTGAACATCTGGCTGATAGAAGCTTTGATGGGTATGAGCTTCAAGGGCAAGGCCAAGTCCCTTTCAAGACCTTTTCAACTCTTCAGATTTTAGCTCTGAATCTCTCCCAGATTTTATAAATTGCAAATTCAGAGTGGAGAGCATTGTAAGGTTCTAGGGTAACCAAGTTTTGTAGATAGTCTTTGGATCTTGAACTATACTCTTTCTCCCTCGACCTATCCTATTGAACAAAACCTTTTTTCTCCGTACCCTTTTGTTAAAGTATTGATACAATCAAATTTACAATAACCCAACAACTTAAGCTTTTGGGTTTAGTGGCGGTTTAATATGGTATTAGAGCAAGAGGTTCTGTGTTCAACCTTGTAATGTCATTTCCTCCCCTATTAACATTGAGTTCCACTTGTTGGACCTTCTACAAGTTTCCAAGCGCACAAGTGAGGGAGAGTATTAAAGTATGATATAATTAAATTTATCGTAATCTATCAACTTAAGCTTTTGGGTTTAGTATTTAACACCTTCATTTCCTCTCCCTTGACCCCTCTAGTTGAGGGCCTATTCTCCACTTGTGTTGTTGCCGAGTTTCACTGTTGTTTTTGGTTTTTTTTTTTGAGTACCTCCATCTTATTTTGTCACTCTGTAAAATCATGCCGATATTAAAATATTAAATTCATTAATTATAACTTAGTTGAGCATTAACTTGTCACTCTGTAAAATCATGCCGATATTAAAATATTAAATTCATTAATTATAACTTAGTCGAGCATTAACTTGGGGATAAAAACCTCCATTGTCATGTCAATTATTAAAATTATTGGAGCAGCTAACGAGGAAGAGGAATCTAGAAGAGGGAAGTATTAATAATGGGAACATTTTAGAAAGGCTCGAAAGCAAAGATTACCGATTGTTGTCAATTTCCTTATCCCATTTCATGGGTTTGAGTTAAAAAACATTATTGCTGCAGGATGGCTTACAAAGATATTTTGCTGTTGTCCTTGCCTTCTGAATAAGGTTAAGTTTTGTAATTGTGTATTTTTCTGCTTTGAATTCCGGTTGACAGGCTGCTTCTGATGAGGAAGCTGAAAAATATGAGAGGGCATTTGTTTTCCAGCTTTTGGCAACAGACAGCTCCAGTGGTGGCAAAGAGGTCCAACTTTTAATTGACCACATTGATTTTAGTTCCATTTTGCACATGCTTAATTGTTTATAA

mRNA sequence

ATGTTCACAATCTCGAACAAGGAAATGAAGAAGGGAAGCGTGAAGATGATGAGCCTCACCGTAGATGAATCACGGACGCTCTACTCTTTGCTAGCAGGAGGAGATCACCGCCCCTTTCTGGACATCATCGCCGATTTTGCCGCCAAGATCCCTCGCACTCGTCACTTTATTGCTTGTTATTCCCTCGCTACTCTCTTGGAGCCAAAGAAGTTGCTCCATGCTTCTCAACGTTTAGTGGGATTTTCTATTCTTCACCAGACATATTCCTCGCAGAAATCTTCTTCTAATCCGTTTATATCTTTTATTGTAAATGCTGCTTCTGATGAGGAAGCTGAAAAATATGAGAGGGCATTTGTTTTCCAGCTTTTGGCAACAGACAGCTCCAGTGGTGGCAAAGAGGTCCAACTTTTAATTGACCACATTGATTTTAGTTCCATTTTGCACATGCTTAATTGTTTATAA

Coding sequence (CDS)

ATGTTCACAATCTCGAACAAGGAAATGAAGAAGGGAAGCGTGAAGATGATGAGCCTCACCGTAGATGAATCACGGACGCTCTACTCTTTGCTAGCAGGAGGAGATCACCGCCCCTTTCTGGACATCATCGCCGATTTTGCCGCCAAGATCCCTCGCACTCGTCACTTTATTGCTTGTTATTCCCTCGCTACTCTCTTGGAGCCAAAGAAGTTGCTCCATGCTTCTCAACGTTTAGTGGGATTTTCTATTCTTCACCAGACATATTCCTCGCAGAAATCTTCTTCTAATCCGTTTATATCTTTTATTGTAAATGCTGCTTCTGATGAGGAAGCTGAAAAATATGAGAGGGCATTTGTTTTCCAGCTTTTGGCAACAGACAGCTCCAGTGGTGGCAAAGAGGTCCAACTTTTAATTGACCACATTGATTTTAGTTCCATTTTGCACATGCTTAATTGTTTATAA

Protein sequence

MFTISNKEMKKGSVKMMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACYSLATLLEPKKLLHASQRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVFQLLATDSSSGGKEVQLLIDHIDFSSILHMLNCL
Homology
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BLAST of Spg026494 vs. NCBI nr
Match: XP_008460852.1 (PREDICTED: CCR4-NOT transcription complex subunit 11 isoform X1 [Cucumis melo])

HSP 1 Score: 222.6 bits (566), Expect = 2.3e-54
Identity = 121/151 (80.13%), Postives = 129/151 (85.43%), Query Frame = 0 

Query: 1   MFTISNKEMKKGSVKMMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACY 60
           MF ISNKE+K GS+K MSLT DESRTLYSLLAGGDHRPF DI+ADF +KIPRTRHF+ACY
Sbjct: 1   MFKISNKEVKSGSMK-MSLTADESRTLYSLLAGGDHRPFSDILADFTSKIPRTRHFVACY 60

Query: 61  SLATLLEPKKLLHASQRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVF 120
           SL  LLEPKKLL A+QRLVGFSILHQTYSSQKSS NPFISFIVNAASDEEAEKYERAFVF
Sbjct: 61  SLLVLLEPKKLLRATQRLVGFSILHQTYSSQKSSFNPFISFIVNAASDEEAEKYERAFVF 120

Query: 121 QLLATDSSSGGKEV--QLLIDHI-DFSSILH 149
           QLLATD+SS GKE   Q   D+I  F   LH
Sbjct: 121 QLLATDTSSSGKEFLKQTASDYIKGFDPSLH 150

[Close]
BLAST of Spg026494 vs. NCBI nr
Match: XP_038901186.1 (CCR4-NOT transcription complex subunit 11 isoform X2 [Benincasa hispida])

HSP 1 Score: 221.9 bits (564), Expect = 3.9e-54
Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 0 

Query: 1   MFTISNKEMKKGSVKMMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACY 60
           MF ISNKE+K+GS+K MSLT DESRTLYSLLAGGDHR F DI+ADF +KIPRTR F+ACY
Sbjct: 1   MFKISNKEVKRGSMK-MSLTADESRTLYSLLAGGDHRSFTDIVADFTSKIPRTRQFVACY 60

Query: 61  SLATLLEPKKLLHASQRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVF 120
           SL  LLEPKKLL A+QRLVGFSILHQTYSSQKSS NPFISFIVNAASDEEAEKYERAFVF
Sbjct: 61  SLVILLEPKKLLRATQRLVGFSILHQTYSSQKSSFNPFISFIVNAASDEEAEKYERAFVF 120

Query: 121 QLLATDSSSGGKE 134
           QLLATDSSSGGKE
Sbjct: 121 QLLATDSSSGGKE 132

[Close]
BLAST of Spg026494 vs. NCBI nr
Match: XP_038901185.1 (CCR4-NOT transcription complex subunit 11 isoform X1 [Benincasa hispida])

HSP 1 Score: 221.9 bits (564), Expect = 3.9e-54
Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 0 

Query: 1   MFTISNKEMKKGSVKMMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACY 60
           MF ISNKE+K+GS+K MSLT DESRTLYSLLAGGDHR F DI+ADF +KIPRTR F+ACY
Sbjct: 1   MFKISNKEVKRGSMK-MSLTADESRTLYSLLAGGDHRSFTDIVADFTSKIPRTRQFVACY 60

Query: 61  SLATLLEPKKLLHASQRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVF 120
           SL  LLEPKKLL A+QRLVGFSILHQTYSSQKSS NPFISFIVNAASDEEAEKYERAFVF
Sbjct: 61  SLVILLEPKKLLRATQRLVGFSILHQTYSSQKSSFNPFISFIVNAASDEEAEKYERAFVF 120

Query: 121 QLLATDSSSGGKE 134
           QLLATDSSSGGKE
Sbjct: 121 QLLATDSSSGGKE 132

[Close]
BLAST of Spg026494 vs. NCBI nr
Match: XP_038901187.1 (CCR4-NOT transcription complex subunit 11 isoform X3 [Benincasa hispida])

HSP 1 Score: 221.5 bits (563), Expect = 5.1e-54
Identity = 121/151 (80.13%), Postives = 129/151 (85.43%), Query Frame = 0 

Query: 1   MFTISNKEMKKGSVKMMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACY 60
           MF ISNKE+K+GS+K MSLT DESRTLYSLLAGGDHR F DI+ADF +KIPRTR F+ACY
Sbjct: 1   MFKISNKEVKRGSMK-MSLTADESRTLYSLLAGGDHRSFTDIVADFTSKIPRTRQFVACY 60

Query: 61  SLATLLEPKKLLHASQRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVF 120
           SL  LLEPKKLL A+QRLVGFSILHQTYSSQKSS NPFISFIVNAASDEEAEKYERAFVF
Sbjct: 61  SLVILLEPKKLLRATQRLVGFSILHQTYSSQKSSFNPFISFIVNAASDEEAEKYERAFVF 120

Query: 121 QLLATDSSSGGKEV--QLLIDHI-DFSSILH 149
           QLLATDSSSGGKE   Q   D+I  F   LH
Sbjct: 121 QLLATDSSSGGKEFLKQTASDYIKGFDPSLH 150

[Close]
BLAST of Spg026494 vs. NCBI nr
Match: XP_011649439.1 (CCR4-NOT transcription complex subunit 11 [Cucumis sativus] >KAE8651994.1 hypothetical protein Csa_016933 [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 9.6e-53
Identity = 119/151 (78.81%), Postives = 126/151 (83.44%), Query Frame = 0 

Query: 1   MFTISNKEMKKGSVKMMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACY 60
           MF ISNKE+K GS+K MSLT DESRTL SLLAGGDHRPF DI+ADF +KIPRTRHF+ACY
Sbjct: 1   MFKISNKEVKSGSMK-MSLTADESRTLLSLLAGGDHRPFTDILADFTSKIPRTRHFVACY 60

Query: 61  SLATLLEPKKLLHASQRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVF 120
           SL  L EPK LL A+QRLVGFSILHQTYSSQKSS NPFISFIVNAASDEEAEKYERAFVF
Sbjct: 61  SLLVLFEPKTLLRATQRLVGFSILHQTYSSQKSSFNPFISFIVNAASDEEAEKYERAFVF 120

Query: 121 QLLATDSSSGGKEV--QLLIDHI-DFSSILH 149
           QLLATDSSS GKE   Q   D+I  F   LH
Sbjct: 121 QLLATDSSSSGKEFLKQTASDYIKGFDPSLH 150

[Close]
BLAST of Spg026494 vs. ExPASy TrEMBL
Match: A0A1S3CDE6 (CCR4-NOT transcription complex subunit 11 OS=Cucumis melo OX=3656 GN=LOC103499604 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54
Identity = 121/151 (80.13%), Postives = 129/151 (85.43%), Query Frame = 0 

Query: 1   MFTISNKEMKKGSVKMMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACY 60
           MF ISNKE+K GS+K MSLT DESRTLYSLLAGGDHRPF DI+ADF +KIPRTRHF+ACY
Sbjct: 1   MFKISNKEVKSGSMK-MSLTADESRTLYSLLAGGDHRPFSDILADFTSKIPRTRHFVACY 60

Query: 61  SLATLLEPKKLLHASQRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVF 120
           SL  LLEPKKLL A+QRLVGFSILHQTYSSQKSS NPFISFIVNAASDEEAEKYERAFVF
Sbjct: 61  SLLVLLEPKKLLRATQRLVGFSILHQTYSSQKSSFNPFISFIVNAASDEEAEKYERAFVF 120

Query: 121 QLLATDSSSGGKEV--QLLIDHI-DFSSILH 149
           QLLATD+SS GKE   Q   D+I  F   LH
Sbjct: 121 QLLATDTSSSGKEFLKQTASDYIKGFDPSLH 150

[Close]
BLAST of Spg026494 vs. ExPASy TrEMBL
Match: A0A0A0LK95 (CCR4-NOT transcription complex subunit 11 OS=Cucumis sativus OX=3659 GN=Csa_2G336700 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.6e-53
Identity = 119/151 (78.81%), Postives = 126/151 (83.44%), Query Frame = 0 

Query: 1   MFTISNKEMKKGSVKMMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACY 60
           MF ISNKE+K GS+K MSLT DESRTL SLLAGGDHRPF DI+ADF +KIPRTRHF+ACY
Sbjct: 1   MFKISNKEVKSGSMK-MSLTADESRTLLSLLAGGDHRPFTDILADFTSKIPRTRHFVACY 60

Query: 61  SLATLLEPKKLLHASQRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVF 120
           SL  L EPK LL A+QRLVGFSILHQTYSSQKSS NPFISFIVNAASDEEAEKYERAFVF
Sbjct: 61  SLLVLFEPKTLLRATQRLVGFSILHQTYSSQKSSFNPFISFIVNAASDEEAEKYERAFVF 120

Query: 121 QLLATDSSSGGKEV--QLLIDHI-DFSSILH 149
           QLLATDSSS GKE   Q   D+I  F   LH
Sbjct: 121 QLLATDSSSSGKEFLKQTASDYIKGFDPSLH 150

[Close]
BLAST of Spg026494 vs. ExPASy TrEMBL
Match: A0A6J1EVU1 (CCR4-NOT transcription complex subunit 11 OS=Cucurbita moschata OX=3662 GN=LOC111438328 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 3.0e-52
Identity = 109/118 (92.37%), Postives = 113/118 (95.76%), Query Frame = 0 

Query: 16  MMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACYSLATLLEPKKLLHAS 75
           MMSLTVDESRTLYSLLAGGDHR FLDII+DF +KIPRTRHF+ACYSL  LLE KKLLHA+
Sbjct: 2   MMSLTVDESRTLYSLLAGGDHRSFLDIISDFTSKIPRTRHFVACYSLVILLERKKLLHAT 61

Query: 76  QRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVFQLLATDSSSGGKE 134
           QRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVFQLLATDSSSGGKE
Sbjct: 62  QRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVFQLLATDSSSGGKE 119

[Close]
BLAST of Spg026494 vs. ExPASy TrEMBL
Match: A0A6J1ICB1 (CCR4-NOT transcription complex subunit 11 OS=Cucurbita maxima OX=3661 GN=LOC111472362 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.9e-52
Identity = 109/118 (92.37%), Postives = 112/118 (94.92%), Query Frame = 0 

Query: 16  MMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACYSLATLLEPKKLLHAS 75
           MMSLTVDESRTLYSLLAGGDHR FLDII+DF  KIPRTRHF+ACYSL  LLE KKLLHA+
Sbjct: 2   MMSLTVDESRTLYSLLAGGDHRTFLDIISDFTTKIPRTRHFVACYSLVILLERKKLLHAT 61

Query: 76  QRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVFQLLATDSSSGGKE 134
           QRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVFQLLATDSSSGGKE
Sbjct: 62  QRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVFQLLATDSSSGGKE 119

[Close]
BLAST of Spg026494 vs. ExPASy TrEMBL
Match: A0A6J1L478 (CCR4-NOT transcription complex subunit 11 OS=Cucurbita maxima OX=3661 GN=LOC111499743 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 6.7e-52
Identity = 112/133 (84.21%), Postives = 121/133 (90.98%), Query Frame = 0 

Query: 1   MFTISNKEMKKGSVKMMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACY 60
           MF ++N E K GS+K M+LTVDESRTLYSLLAGGD RPFLDIIADF +KIPRTR FIACY
Sbjct: 1   MFKMANNEFKWGSMK-MTLTVDESRTLYSLLAGGDERPFLDIIADFTSKIPRTRQFIACY 60

Query: 61  SLATLLEPKKLLHASQRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVF 120
           SLA LLEPKKLLHA+QRLVGFSILHQTYSSQKSSSNPFISFIV+AASDEEAE  ERAF+F
Sbjct: 61  SLAILLEPKKLLHATQRLVGFSILHQTYSSQKSSSNPFISFIVHAASDEEAENCERAFIF 120

Query: 121 QLLATDSSSGGKE 134
           QLLA+DSSS GKE
Sbjct: 121 QLLASDSSSDGKE 132

[Close]
BLAST of Spg026494 vs. TAIR 10
Match: AT5G18420.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 4.3e-19
Identity = 49/128 (38.28%), Postives = 83/128 (64.84%), Query Frame = 0 

Query: 16  MMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACYSLATLLEPKKLLHAS 75
           MM + ++ES  + SLL   D RP  D++++F +K    R+   C SL+ +L+ +++   +
Sbjct: 6   MMIMRIEESAIVLSLLK-SDLRPMEDVLSEFDSKFESARYLSVCNSLSMMLQDQQMFKNT 65

Query: 76  QRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVFQLLATDSSSGGKEVQ 135
           +RL+ F I++Q YSSQK S NPF+S +++AA +E+ EK ERAF+  LL  +S +  KE+ 
Sbjct: 66  ERLIAFGIIYQCYSSQKPSFNPFLSEMISAACNEQLEKSERAFLLHLLQWNSYNNVKEI- 125

Query: 136 LLIDHIDF 144
           L +  +D+
Sbjct: 126 LKLSAVDY 131

[Close]
BLAST of Spg026494 vs. TAIR 10
Match: AT5G18420.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 233 Blast hits to 233 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 2; Plants - 59; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 4.3e-19
Identity = 49/128 (38.28%), Postives = 83/128 (64.84%), Query Frame = 0 

Query: 16  MMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACYSLATLLEPKKLLHAS 75
           MM + ++ES  + SLL   D RP  D++++F +K    R+   C SL+ +L+ +++   +
Sbjct: 6   MMIMRIEESAIVLSLLK-SDLRPMEDVLSEFDSKFESARYLSVCNSLSMMLQDQQMFKNT 65

Query: 76  QRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVFQLLATDSSSGGKEVQ 135
           +RL+ F I++Q YSSQK S NPF+S +++AA +E+ EK ERAF+  LL  +S +  KE+ 
Sbjct: 66  ERLIAFGIIYQCYSSQKPSFNPFLSEMISAACNEQLEKSERAFLLHLLQWNSYNNVKEI- 125

Query: 136 LLIDHIDF 144
           L +  +D+
Sbjct: 126 LKLSAVDY 131

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BLAST of Spg026494 vs. TAIR 10
Match: AT5G18420.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 85.9 bits (211), Expect = 3.1e-17
Identity = 49/128 (38.28%), Postives = 81/128 (63.28%), Query Frame = 0 

Query: 16  MMSLTVDESRTLYSLLAGGDHRPFLDIIADFAAKIPRTRHFIACYSLATLLEPKKLLHAS 75
           MM + ++ES  + SLL   D RP  D++++F +K    R+   C SL+ +L+   +   +
Sbjct: 6   MMIMRIEESAIVLSLLK-SDLRPMEDVLSEFDSKFESARYLSVCNSLSMMLQ---MFKNT 65

Query: 76  QRLVGFSILHQTYSSQKSSSNPFISFIVNAASDEEAEKYERAFVFQLLATDSSSGGKEVQ 135
           +RL+ F I++Q YSSQK S NPF+S +++AA +E+ EK ERAF+  LL  +S +  KE+ 
Sbjct: 66  ERLIAFGIIYQCYSSQKPSFNPFLSEMISAACNEQLEKSERAFLLHLLQWNSYNNVKEI- 125

Query: 136 LLIDHIDF 144
           L +  +D+
Sbjct: 126 LKLSAVDY 128

The following BLAST results are available for this feature:
BLAST of Spg026494 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460852.12.3e-5480.13PREDICTED: CCR4-NOT transcription complex subunit 11 isoform X1 [Cucumis melo][more]
XP_038901186.13.9e-5486.47CCR4-NOT transcription complex subunit 11 isoform X2 [Benincasa hispida][more]
XP_038901185.13.9e-5486.47CCR4-NOT transcription complex subunit 11 isoform X1 [Benincasa hispida][more]
XP_038901187.15.1e-5480.13CCR4-NOT transcription complex subunit 11 isoform X3 [Benincasa hispida][more]
XP_011649439.19.6e-5378.81CCR4-NOT transcription complex subunit 11 [Cucumis sativus] >KAE8651994.1 hypoth... [more]
BLAST of Spg026494 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg026494 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CDE61.1e-5480.13CCR4-NOT transcription complex subunit 11 OS=Cucumis melo OX=3656 GN=LOC10349960... [more]
A0A0A0LK954.6e-5378.81CCR4-NOT transcription complex subunit 11 OS=Cucumis sativus OX=3659 GN=Csa_2G33... [more]
A0A6J1EVU13.0e-5292.37CCR4-NOT transcription complex subunit 11 OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1ICB13.9e-5292.37CCR4-NOT transcription complex subunit 11 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A6J1L4786.7e-5284.21CCR4-NOT transcription complex subunit 11 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
BLAST of Spg026494 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G18420.14.3e-1938.28unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G18420.24.3e-1938.28unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G18420.33.1e-1738.28unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019312CCR4-NOT transcription complex subunit 11PANTHERPTHR15975UNCHARACTERIZEDcoord: 19..135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg026494.1Spg026494.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031047 gene silencing by RNA
cellular_component GO:0030014 CCR4-NOT complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus