Spg026469 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg026469
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPlant transposase
Locationscaffold13: 18369007 .. 18372401 (-)
RNA-Seq ExpressionSpg026469
SyntenySpg026469
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCGCGCACGACTCGGAACGGCCTCTGTTTTTCCAGAAATGCGGGGAATTTCAGCTTCAACTCTGTTTTTCTGCACAGTAACAAACTAAGTCAAATTGCTACAAATCAAGTCTTTTTAAGCACAAATAAGCATAATTCAACACAAGTGACTCTCAACACCCTAACTTATCAAATTAACCTATTTCGAGTTCGAAAATAGTAAAATTGACCTAAGCACTCAATATTGTTTCATTCACTATCTATGAGTTTTAGGGCACCAACCCCAACAACTTTGACTGAAAATGACTTCAAGGATATTGTTGTTATGTTGGTAGGAACGTATTGACCAAACTGATGTTGAGACAATAACTTCTTCAAATAACGTGGTTGAGGATGCATTGAGTAAAGTTCTCGGTCCTGATCGTGGGCATGTAAGAGGATTTAGATTTGGTTTGACTCGTTCAAAATTATCTCTTCTTTCGCAACGAGATAACAAGGTCACAATGCTTGAAAAAGAATATATAAGGATGAAGGAGAAAATCATGGAAATGGAATATCTCATGGCATGTTTTATTAAAAAGCAGGTAAACTAATGTTATATTTGAACTCAAATTAATGTGTTTTTAGTGAACTTCATGCTATGTTTGAACTTAAATTATTATAGGTTGAACCAAGTGAGGAGCTTTCAACTTTTCCTACATCATCTCCATCGGTAAATTTATTTTTTAATGTATGATGAAATAATAATATTATTATTGTTATCATTCAATTCTCATTTATCTTATATTTTCTTCTCATAAGGAGTATTAATTATAATACCTAAATTAAGTGCAAGTTATTAGATTGGCATGGCTCAGGCAAGATAGTTGCAAAAGGACGTTAGTCTTCCAATGATCCAGCTGCTCTTGTTCATCACATTCCTATTTGACCATATGCAGTTAGAGTTTGGGTTGATGTCTCAATGAAACCTGATGCATTTTTATGGAGGCCCACATCAGAAATGACATGCATTGAAGAATTTGTGGGGAGTACAGTTGCATGGTCATCTGACAAAGTGACTATTAGTAGGATTTTTTTCTAAGTCTATTTATTTTCATTTAATAATAACATTAGACGAATTTTATGTATCGTTGGATAGCTTTTTTGTTCAATACTATTGACAACTCCATGGTACTATTGAATACTTTCTTTTGTAATGTAAGTGGATAACAAAATTTCAATTTCGAAAGAAAGTCATGATATGCTATAAAATATTTCCTCTGTGTAGATTTAGTTAAATTAAAAACAAGTACTTGAAGTAAATTTTATAAAAATTGCACCAATTTAAATGATATTTAAATATTAAACTGAATTCATTTGGTAGCACGAATAGTAAATTATATAGCCATAAGTAGATATAATAAAATTTACAAAGCAAAAAAAAAATGCTATGAAAATGTTACTACATGTTAAACATAGCATTGAGAAAAGGTTATAATATGTTAAAAGATAACAATAAAAATGCTACAATATATTAGAGATAGCGTTAAGAAAAGCTATAATATGTTAAACGATAACATTAAAAAAATGCTATAATATATTAAAGATAACGTTAAAAAAAAAGCTATAATACGTTAAAGATAGCGTTGCGAAAAGGCTATAATAGCTTAACGATAGTGTTAAGAAAATGCTATATAAACATATGATAGCTTTCATAAGAATCACTATAAAAGATTTTGATAGCAATGCATATATGTTATATCTTCATACTTTATTATAGCACTCGTCATAACTATACAAAAACGCTATTAAAAGTCAGGGGCTATCAGGACTTTCAAAAAAAGCTATAAAAAGTCTATTGTAGCGTTTTTTGTTAACTATCGTATCTGTTATTTCTTGTAGTGTCGATTGAAATAGAAACTTAACTAGTCAACGGTGTTACATCTAGTGGTTAATATTTTGCGGTCTGGTCTTATGCAAACTCATTGCATAGGTACCCCAACTCGCATGTCCACTACATGAACGCGTTGGATCAATGTGTTTGTATCGAATACAAAGTGAGTCATATCACATAGTGTAACCAGGATAAGGTATTGATAACTGCCCAAAAGGTAGTTATTTAGGCCTCATTTATATAGGGTTTTGTGTGTCCTTTGTGCTTATTAGGGTTGGTTGTGGACAGATATTACATGTTTTAACCCATTTGGAAGAATGGAAGCTTTGGAAATCATTTTGTGTAGAATCTGTTGCTGGGCGACTTGAGGGAGTGGATTTTATGCTGGAGCAAACCCGGAGGCAAAACTGCCACGTCACAACTCGTTATCCAATTTAGTAAACCGACTTCTGTTGAGTTATTTTCGGATAAAGGAGCAAGGAGAGCCCTACACGTGTCCAAGTTGACCTAATTCAAGACTCCTACCACCTCTATAAAAGGAGATAGCCGCCCAAGTCAAATTCATTCCAACTTTCCTTGGAAGCCGAGTAGTATAGAGAGATTGGAGATTACCAAGAACACCATCGTCCGCAAGCTGATTAAGGAAATTATTATTTTCTTTATTATCTTGTGTTAATGGACGTGCCTACTCAGATTGTAATTCGTGTTCCCATGCTTATTATGAACTAAGTAGCTTTAGGCGTTGGTTAAGGAATATGTAGTTTCCGTGCTTCATCTCTAATAATATTTATTGATTATTGCATCTTGGTTAATTGTTGTGCTTGTTTCTATTTTATGCCCGCTTGGCCAGCCGGTATGAATACCTCTCTCTAGTTTCAGGGATGATTTAGGGAGTGTGTGGCAATTAACCACACTACGATCATTGTGTATTGGTGAACGCCAGTGACTGAGCTAGGGATAGCCAGTTGCCTAGTGCTTGATCGGTCGCACTCCATTGGGGTTGAAACACATTCCAAAAGATCCGGAGTTCCGGGAGGAATCCGCTAATAATACTGCGAGAGTTTGCATGATCAATAATATTGCTAGAGCATCTTTTAAAACAATTACTAAACCTAACCAGCGCCTGCCTCTAATCTGTCTGCCTATTTGTTTACTTGTTGTTCTGCCATTTACTTTGCTTCAGCATAATTCTTATAAAACCCAATCATTTTTATTACCTTGAAACCATTAAAAGATTCATACAAAATAGATAGAGTGGAAGCTAGTTCAGGCCTTGGATTGACAAATACTTACCACTTGCTGCAGACTGTGTATACTTGCACAGGAATTCTAGAGTCTTTTCAGATCATAATTTTACTCACTCTAGGAACCCAACAAGTTTTTGGCGCCGTTGCCGGGGACTTGAGTAAGTTTTTATCTGATCTGTTTTGTGTATGTGTTTTGGTGGTTTGGTGCTAGAACTTTTTGATTGTTTCTTTTGTTTTTGCAGGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGGTGAGGTTCGAGCTTGA

mRNA sequence

ATGACCCGCGCACGACTCGGAACGGCCTCTGTTTTTCCAGAAATGCGGGGAATTTCAGCTTCAACTCTGTTTTTCTGCACAGAACGTATTGACCAAACTGATGTTGAGACAATAACTTCTTCAAATAACGTGGTTGAGGATGCATTGAGTAAAGTTCTCGGTCCTGATCGTGGGCATGTAAGAGGATTTAGATTTGGTTTGACTCGTTCAAAATTATCTCTTCTTTCGCAACGAGATAACAAGGTCACAATGCTTGAAAAAGAATATATAAGGATGAAGGAGAAAATCATGGAAATGGAATATCTCATGGCATGTTTTATTAAAAAGCAGGTACCCCAACTCGCATGTCCACTACATGAACGCGTTGGATCAATGTGTTTGTATCGAATACAAAGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGGTGAGGTTCGAGCTTGA

Coding sequence (CDS)

ATGACCCGCGCACGACTCGGAACGGCCTCTGTTTTTCCAGAAATGCGGGGAATTTCAGCTTCAACTCTGTTTTTCTGCACAGAACGTATTGACCAAACTGATGTTGAGACAATAACTTCTTCAAATAACGTGGTTGAGGATGCATTGAGTAAAGTTCTCGGTCCTGATCGTGGGCATGTAAGAGGATTTAGATTTGGTTTGACTCGTTCAAAATTATCTCTTCTTTCGCAACGAGATAACAAGGTCACAATGCTTGAAAAAGAATATATAAGGATGAAGGAGAAAATCATGGAAATGGAATATCTCATGGCATGTTTTATTAAAAAGCAGGTACCCCAACTCGCATGTCCACTACATGAACGCGTTGGATCAATGTGTTTGTATCGAATACAAAGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGGTGAGGTTCGAGCTTGA

Protein sequence

MTRARLGTASVFPEMRGISASTLFFCTERIDQTDVETITSSNNVVEDALSKVLGPDRGHVRGFRFGLTRSKLSLLSQRDNKVTMLEKEYIRMKEKIMEMEYLMACFIKKQVPQLACPLHERVGSMCLYRIQSVSLVHERSAWGEVRA
Homology
[Close]
BLAST of Spg026469 vs. NCBI nr
Match: KAA0054504.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 110.9 bits (276), Expect = 9.3e-21
Identity = 58/93 (62.37%), Postives = 74/93 (79.57%), Query Frame = 0 

Query: 28  ERIDQTDVETITSSNNVVEDALSKVLGPDRGHVRGFRFGLTRSKLSLLSQRDNKVTMLEK 87
           ERI+QT+ ETI S+ NVV+DALSKVLGPDRGHVRGF FG+TRSKLSLLSQ+D+K  +LEK
Sbjct: 569 ERIEQTEAETIVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 628

Query: 88  EYIRMKE----------KIMEMEYLMACFIKKQ 111
           EY++MKE          +++EM+ LM  ++KKQ
Sbjct: 629 EYLKMKEEMVEMKTMKDEMIEMKALMLSYLKKQ 661

[Close]
BLAST of Spg026469 vs. NCBI nr
Match: TYK13531.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 3.5e-20
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0 

Query: 28  ERIDQTDVETITSSNNVVEDALSKVLGPDRGHVRGFRFGLTRSKLSLLSQRDNKVTMLEK 87
           ERI+QT+ ET  S+ NVV+DALSKVLGPDRGHVRGF FG+TRSKLSLLSQ+D+K  +LEK
Sbjct: 610 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 669

Query: 88  EYIRMKE----------KIMEMEYLMACFIKKQ 111
           EY++MKE          +++EM+ LM  ++KKQ
Sbjct: 670 EYLKMKEEMVEMKTMKDEMIEMKALMLSYLKKQ 702

[Close]
BLAST of Spg026469 vs. NCBI nr
Match: KAA0038435.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 3.5e-20
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0 

Query: 28  ERIDQTDVETITSSNNVVEDALSKVLGPDRGHVRGFRFGLTRSKLSLLSQRDNKVTMLEK 87
           ERI+QT+ ET  S+ NVV+DALSKVLGPDRGHVRGF FG+TRSKLSLLSQ+D+K  +LEK
Sbjct: 119 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 178

Query: 88  EYIRMKE----------KIMEMEYLMACFIKKQ 111
           EY++MKE          +++EM+ LM  ++KKQ
Sbjct: 179 EYLKMKEEMVEMKTMKDEMIEMKALMLSYLKKQ 211

[Close]
BLAST of Spg026469 vs. NCBI nr
Match: TYK25923.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 3.5e-20
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0 

Query: 28  ERIDQTDVETITSSNNVVEDALSKVLGPDRGHVRGFRFGLTRSKLSLLSQRDNKVTMLEK 87
           ERI+QT+ ET  S+ NVV+DALSKVLGPDRGHVRGF FG+TRSKLSLLSQ+D+K  +LEK
Sbjct: 119 ERIEQTEAETTASTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 178

Query: 88  EYIRMKE----------KIMEMEYLMACFIKKQ 111
           EY++MKE          +++EM+ LM  ++KKQ
Sbjct: 179 EYLKMKEEMVEMKTMKDEMIEMKALMLSYLKKQ 211

[Close]
BLAST of Spg026469 vs. NCBI nr
Match: KAA0066537.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 3.5e-20
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0 

Query: 28  ERIDQTDVETITSSNNVVEDALSKVLGPDRGHVRGFRFGLTRSKLSLLSQRDNKVTMLEK 87
           ERI+QT+ ET  S+ NVV+DALSKVLGPDRGHVRGF FG+TRSKLSLLSQ+D+K  +LEK
Sbjct: 119 ERIEQTEAETTASTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 178

Query: 88  EYIRMKE----------KIMEMEYLMACFIKKQ 111
           EY++MKE          +++EM+ LM  ++KKQ
Sbjct: 179 EYLKMKEEMVEMKTMKDEMIEMKALMLSYLKKQ 211

[Close]
BLAST of Spg026469 vs. ExPASy TrEMBL
Match: A0A5A7UH86 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002840 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 4.5e-21
Identity = 58/93 (62.37%), Postives = 74/93 (79.57%), Query Frame = 0 

Query: 28  ERIDQTDVETITSSNNVVEDALSKVLGPDRGHVRGFRFGLTRSKLSLLSQRDNKVTMLEK 87
           ERI+QT+ ETI S+ NVV+DALSKVLGPDRGHVRGF FG+TRSKLSLLSQ+D+K  +LEK
Sbjct: 569 ERIEQTEAETIVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 628

Query: 88  EYIRMKE----------KIMEMEYLMACFIKKQ 111
           EY++MKE          +++EM+ LM  ++KKQ
Sbjct: 629 EYLKMKEEMVEMKTMKDEMIEMKALMLSYLKKQ 661

[Close]
BLAST of Spg026469 vs. ExPASy TrEMBL
Match: A0A5D3CNY4 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00040 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0 

Query: 28  ERIDQTDVETITSSNNVVEDALSKVLGPDRGHVRGFRFGLTRSKLSLLSQRDNKVTMLEK 87
           ERI+QT+ ET  S+ NVV+DALSKVLGPDRGHVRGF FG+TRSKLSLLSQ+D+K  +LEK
Sbjct: 610 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 669

Query: 88  EYIRMKE----------KIMEMEYLMACFIKKQ 111
           EY++MKE          +++EM+ LM  ++KKQ
Sbjct: 670 EYLKMKEEMVEMKTMKDEMIEMKALMLSYLKKQ 702

[Close]
BLAST of Spg026469 vs. ExPASy TrEMBL
Match: A0A5D3DQI7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00150 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0 

Query: 28  ERIDQTDVETITSSNNVVEDALSKVLGPDRGHVRGFRFGLTRSKLSLLSQRDNKVTMLEK 87
           ERI+QT+ ET  S+ NVV+DALSKVLGPDRGHVRGF FG+TRSKLSLLSQ+D+K  +LEK
Sbjct: 119 ERIEQTEAETTASTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 178

Query: 88  EYIRMKE----------KIMEMEYLMACFIKKQ 111
           EY++MKE          +++EM+ LM  ++KKQ
Sbjct: 179 EYLKMKEEMVEMKTMKDEMIEMKALMLSYLKKQ 211

[Close]
BLAST of Spg026469 vs. ExPASy TrEMBL
Match: A0A5A7TAN8 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G003350 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0 

Query: 28  ERIDQTDVETITSSNNVVEDALSKVLGPDRGHVRGFRFGLTRSKLSLLSQRDNKVTMLEK 87
           ERI+QT+ ET  S+ NVV+DALSKVLGPDRGHVRGF FG+TRSKLSLLSQ+D+K  +LEK
Sbjct: 119 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 178

Query: 88  EYIRMKE----------KIMEMEYLMACFIKKQ 111
           EY++MKE          +++EM+ LM  ++KKQ
Sbjct: 179 EYLKMKEEMVEMKTMKDEMIEMKALMLSYLKKQ 211

[Close]
BLAST of Spg026469 vs. ExPASy TrEMBL
Match: A0A5A7VHH9 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00970 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0 

Query: 28  ERIDQTDVETITSSNNVVEDALSKVLGPDRGHVRGFRFGLTRSKLSLLSQRDNKVTMLEK 87
           ERI+QT+ ET  S+ NVV+DALSKVLGPDRGHVRGF FG+TRSKLSLLSQ+D+K  +LEK
Sbjct: 119 ERIEQTEAETTASTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 178

Query: 88  EYIRMKE----------KIMEMEYLMACFIKKQ 111
           EY++MKE          +++EM+ LM  ++KKQ
Sbjct: 179 EYLKMKEEMVEMKTMKDEMIEMKALMLSYLKKQ 211

The following BLAST results are available for this feature:
BLAST of Spg026469 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0054504.19.3e-2162.37putative TNP1-like transposon protein [Cucumis melo var. makuwa][more]
TYK13531.13.5e-2061.29putative TNP1-like transposon protein [Cucumis melo var. makuwa][more]
KAA0038435.13.5e-2061.29Plant transposase [Cucumis melo var. makuwa][more]
TYK25923.13.5e-2061.29Plant transposase [Cucumis melo var. makuwa][more]
KAA0066537.13.5e-2061.29Plant transposase [Cucumis melo var. makuwa][more]
BLAST of Spg026469 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg026469 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UH864.5e-2162.37Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5D3CNY41.7e-2061.29Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5D3DQI71.7e-2061.29Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00... [more]
A0A5A7TAN81.7e-2061.29Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00... [more]
A0A5A7VHH91.7e-2061.29Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G009... [more]
BLAST of Spg026469 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg026469.1Spg026469.1mRNA