Spg026448 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGGATCAAAAGTAATGAGGATTCTTCTTCTTTGGACAGAAATCGACGGTGGTCTCCTCCGAATGGCGTATTTTGGAAGCTTAACTCTGATGCTGCATGTTCGAAAGAGGTCTCGATGACAAGTCTTGGGATGATCTGCAGAAATTTTGAGGGCAAAGTTACGGTAGCTGCATCAAAGGCTTTGGACGTGAGGTTGGAGGCCCATATTGCTGAATTATGGGCCATCCTTGAAGGTTTAAAGCTGGTTATTTCATTGGGCTGCACTATGTTAGTTGTGGAGTCCGATTGTCAACTTGCTATCAATTTCATCAATAAGGTTTCTCTTATTTGGTCAGATTCAGAGGCCATAGTTCTGTCTATTTGGAGCCTCTTACCTTTTTTTTAGGGATATCTCTTTCAATTTTGCTCCTAGATCTTGTAATAGGGTTGCCCACGAGATTGCTCGATATGGGAAATCTGTAAATAGCCATGACGTTTGGGTCTCTAATTTCTCAAACTGGATGTGTATGTTTCCCTAATTAATTAAGCTAGTCTTTTATATTTAATTGGCCAAAATTATGCATTTTATGTTCTTTTTGTAGGAATCATGTTTCGGAGTTAAATCGAGAAATTGGAGCTAAATACGTGTTCGGGACATGAAAATTGGCTAAAGAACGAAAAAGATTCAACCAAGAAGAAGTCAAAAGAGAGCCATCCGTAGGCCAGCGTCGGGACGCTGCTCTTGGAGCGTCTCGACGCTGCCTTTCCTTTTCTGAATTGGGCGGCAACAGAGACAGCGTCGAGACGCTATCTCCTTAGCGTCGAGACGCTGTGACAGCGTCGCGACACTATGTACACAGCGTCGCGACGCTACCCGTAGATTTTCTATAAATTCCTCTTTTCAGCTACGGATTTGGGAGGCCAATTGGTTAGATTTTAGCCCTAATTTCGACTAGAGACCTTTTGTGGGAGCTAAAGGCAAGGCCAAGGAGCGGGAATCAAGCGAGAAGACGTGCAGATCGTGACGGGGACGTGCTGGTTTCGACGGATTCGAGTTTTCCCTTTTCTTTCCCTTAACTCTTGTAGTTTTTATGGCTTTTCTTTCAATTAGTGTTTATGGTTTAGAGACTATGAATTGCTAGTTGTTTGTCTTAGGGATTGATGTAATTGTTTAAGTTTGTTGGATTAATTTTTGGTATGAATGTGCTTTTATTCTATGCATGCAATTTTGTGTTTAATGCTTTCAATTACTTGATCACTAATTGAATGATTTAAGTGTTGAATCTAACTCGGGAGAGAGGATTTGGCCTAAGACTTACCTTGTTTAATTGCATGACTAGAGTAGAAATTCTAAGTTTGTGACAGGATTTGGAATATCTTTAGAAGCATAACAAGGACCGAACCGAATAATGCCTTGCATGTTAATGAACTTAGATAGGGATATCAAGTTGGTTTATATGCATGAGAATCAATTATACTCGGGAGAGGTAATCGTGATAAAAGTTTCCTTGGCTTGTAGAATAATTGCACGGTCAATTCATTCCTATTCATCAATCCTCATTCTTAATCAATGAAATCAATTCCCCAAGAATCTTTCCATTTGAGTCTCCACTTTTATTTTATGCTTTTTGTCTTTAGATTTATCTTTTATCATTGAGTTTTGCTCCCTAAATAAAATTGAACAAAAGTATTCACGATACTTAATTTGCTAGAAAACCAATCCAGAGGACGACACTCGTTTTACACGAAAACACTATATTATTACTTGACTCGTACACTTGCGGTAAGCAATTTGCACATCAATAATTTTGGCCAATTAAATATAAAAGACTAGCTTAATTAATTAGGGAAACATAGCTAGCTATGCTTGCTATCAGTAGGACATAAGACCTTGGTTATAAGGGAACTCTACCGACAAATGGTTCGGAACCGGAGTTGAATTAATCATAGTCTTACTAGCACGCAATGTCACTAGGTTATTAAAAGTGTTTAATCACCTAGAAATTTAGTATAAAGACCTTGTTTAATAAGGCATAGACTTAGATAGATTCATTTAGCTGGAATTTACCTAAGTAATAAGACCCTAAAACTTTACGATACTTTAGTGGGAGGAAAAAGTATAGAAACGAAATATTCATATTAAGTTTCTACTCTCACGTCCCCCTGATTTCACACCTTGAGATCCATGCTTGGCCTCGAGGCGCCCTGGGAGCGTCCCCCTACGGATGGTGTTTGCATGGGTTAATATCAAAGTGAATGGGGAAAGTGTTCATAGTAAGTGGGAGAAGGAAACGTGTCAAACGTATCCTGTGGTCTCCGTCATTAGGTTGCACCGTGAGATTCCTATGCGCTGCATGCGAGTCGCCCTGGGAGCGATCACCCTACGGAGGGCTTGCGCATGGGATTCAGAACAACGCAAACTCCAGAAAAGGATATGGTTTCCTAGGGCCATTCCCAACATTAGCTCTTCCCTACGGTGGCATTGTTGGGGCCGCCCTCTGCGATCTGAAAATGATGGGTAA ATGCGGATCAAAAGTAATGAGGATTCTTCTTCTTTGGACAGAAATCGACGGTGGTCTCCTCCGAATGGCGTATTTTGGAAGCTTAACTCTGATGCTGCATGTTCGAAAGAGGTCTCGATGACAAGTCTTGGGATGATCTGCAGAAATTTTGAGGGCAAAGTTACGGTAGCTGCATCAAAGGCTTTGGACGTGAGGTTGGAGGCCCATATTGCTGAATTATGGGCCATCCTTGAAGGTTTAAAGCTGGTTATTTCATTGGGCTGCACTATGTTAGTTGTGGAGTCCGATTGTCAACTTGCTATCAATTTCATCAATAAGAGACAGCGTCGAGACGCTATCTCCTTAGCGTCGAGACGCTGTGACAGCGTCGCGACACTATGTACACAGCGTCGCGACGCTACCCGTAGATTTTCTATAAATTCCTCTTTTCAGCTACGGATTTGGGAGGCCAATTGGCGCCCTGGGAGCGTCCCCCTACGGATGGTGTTTGCATGGGTTAATATCAAAGTGAATGGGGAAAGTGTTCATAGTAAGTGGGAGAAGGAAACGTGTCAAACGTATCCTGTGGTCTCCGTCATTAGGTTGCACCGTGAGATTCCTATGCGCTGCATGCGAGTCGCCCTGGGAGCGATCACCCTACGGAGGGCTTGCGCATGGGATTCAGAACAACGCAAACTCCAGAAAAGGATATGGTTTCCTAGGGCCATTCCCAACATTAGCTCTTCCCTACGGTGGCATTGTTGGGGCCGCCCTCTGCGATCTGAAAATGATGGGTAA ATGCGGATCAAAAGTAATGAGGATTCTTCTTCTTTGGACAGAAATCGACGGTGGTCTCCTCCGAATGGCGTATTTTGGAAGCTTAACTCTGATGCTGCATGTTCGAAAGAGGTCTCGATGACAAGTCTTGGGATGATCTGCAGAAATTTTGAGGGCAAAGTTACGGTAGCTGCATCAAAGGCTTTGGACGTGAGGTTGGAGGCCCATATTGCTGAATTATGGGCCATCCTTGAAGGTTTAAAGCTGGTTATTTCATTGGGCTGCACTATGTTAGTTGTGGAGTCCGATTGTCAACTTGCTATCAATTTCATCAATAAGAGACAGCGTCGAGACGCTATCTCCTTAGCGTCGAGACGCTGTGACAGCGTCGCGACACTATGTACACAGCGTCGCGACGCTACCCGTAGATTTTCTATAAATTCCTCTTTTCAGCTACGGATTTGGGAGGCCAATTGGCGCCCTGGGAGCGTCCCCCTACGGATGGTGTTTGCATGGGTTAATATCAAAGTGAATGGGGAAAGTGTTCATAGTAAGTGGGAGAAGGAAACGTGTCAAACGTATCCTGTGGTCTCCGTCATTAGGTTGCACCGTGAGATTCCTATGCGCTGCATGCGAGTCGCCCTGGGAGCGATCACCCTACGGAGGGCTTGCGCATGGGATTCAGAACAACGCAAACTCCAGAAAAGGATATGGTTTCCTAGGGCCATTCCCAACATTAGCTCTTCCCTACGGTGGCATTGTTGGGGCCGCCCTCTGCGATCTGAAAATGATGGGTAA MRIKSNEDSSSLDRNRRWSPPNGVFWKLNSDAACSKEVSMTSLGMICRNFEGKVTVAASKALDVRLEAHIAELWAILEGLKLVISLGCTMLVVESDCQLAINFINKRQRRDAISLASRRCDSVATLCTQRRDATRRFSINSSFQLRIWEANWRPGSVPLRMVFAWVNIKVNGESVHSKWEKETCQTYPVVSVIRLHREIPMRCMRVALGAITLRRACAWDSEQRKLQKRIWFPRAIPNISSSLRWHCWGRPLRSENDG Homology
BLAST of Spg026448 vs. NCBI nr
Match: XP_040996092.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC121242268 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 76.6 bits (187), Expect = 3.4e-10 Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 0
BLAST of Spg026448 vs. NCBI nr
Match: OMO72757.1 (hypothetical protein CCACVL1_17615 [Corchorus capsularis]) HSP 1 Score: 70.9 bits (172), Expect = 1.9e-08 Identity = 47/123 (38.21%), Postives = 64/123 (52.03%), Query Frame = 0
BLAST of Spg026448 vs. NCBI nr
Match: XP_042965942.1 (uncharacterized protein LOC122299620 [Carya illinoinensis]) HSP 1 Score: 68.9 bits (167), Expect = 7.1e-08 Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 0
BLAST of Spg026448 vs. NCBI nr
Match: XP_042950144.1 (uncharacterized protein LOC122282259 [Carya illinoinensis]) HSP 1 Score: 68.9 bits (167), Expect = 7.1e-08 Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 0
BLAST of Spg026448 vs. NCBI nr
Match: KAF5454638.1 (hypothetical protein F2P56_024287 [Juglans regia]) HSP 1 Score: 68.9 bits (167), Expect = 7.1e-08 Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of Spg026448 vs. ExPASy TrEMBL
Match: A0A1R3HQR7 (Ribonuclease H OS=Corchorus capsularis OX=210143 GN=CCACVL1_17615 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 9.0e-09 Identity = 47/123 (38.21%), Postives = 64/123 (52.03%), Query Frame = 0
BLAST of Spg026448 vs. ExPASy TrEMBL
Match: A0A1R3GKQ5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_25420 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 5.9e-08 Identity = 35/95 (36.84%), Postives = 57/95 (60.00%), Query Frame = 0
BLAST of Spg026448 vs. ExPASy TrEMBL
Match: A0A1S8ABJ9 (Ribonuclease H-like superfamily protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 7.7e-08 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Spg026448 vs. ExPASy TrEMBL
Match: A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 7.7e-08 Identity = 45/100 (45.00%), Postives = 55/100 (55.00%), Query Frame = 0
BLAST of Spg026448 vs. ExPASy TrEMBL
Match: A0A6J1DJL6 (uncharacterized protein LOC111021711 OS=Momordica charantia OX=3673 GN=LOC111021711 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.8e-07 Identity = 39/101 (38.61%), Postives = 58/101 (57.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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