Spg026297 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg026297
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold13: 17831463 .. 17834241 (+)
RNA-Seq ExpressionSpg026297
SyntenySpg026297
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGCAAACAAAAGTAGAAACAGAGTGTGCGCTAGATCCTGAGGTGCAATCTAAAGAGCAAATCCTTCCACCACAACAAGAGGATGAAAATGTGCTCGAGGACCTGATCGAGCACCAGAAGGGATCCATGTTCGAAGACTTGATTGAACATGAGAAAAAACGCAATGCAGCTGAAGGAAATATTAAGAAGAGAAAAAGAAAAGACAGCTCCCCAAGGAAGCATAACATTAGGGAAGTGACTTCTGAGCTTCCCCAAGCAAAGACACCACCATCACCGCCACCTGCGAGGAGAGAACAAGCTGTTCCTCTGCCAAAGAAGACTCCAACAAAAAGGCCGAGCAAAGAAGTCCAAGTGGAGGCACATCCAGACGCTAAGACTCGTCTAGCTATCATGAAGAAGCGGGTTTTGACGTGTGAGAAAGCATTCTCCACGAAGACAGGTCCTCTCCAAGCATTTATCGATGATATTTTGTGTAGGTATGGCTAGGAGCGGCTGCGTAAGGAGGCGAAGACTGCATCTATTCCATTGGTTCAAGAGTTCTATGCACAAATAAGGGAAGAGATGCAGACGATCATGCTTCTACGTGATAGGGTGGTGGAATTTTTCAGCAAGGCAGATCAATTGGATTTTCTGACTGCCATCCCTCCGATACCCAGCTGGCAATAAATCCATTGAAGAACCATCTGGTGAGCAGCTGACCGAGGCCCTACACATGGTGGCCTACAAGGGAGTTAAGTGACAGGAGTCAGGACTCTACTGTCAGGAGATTTGAAGCCAGAAGAAGCTGTCTGGCTATGCATGATCAAGAACCGAATAGTGCCAACAACACATGACACCACAATATCTCAAGAACGTGTCATTGACGGAAGAGATTGTCGCGGTCTCTTGTCAAATAAATTTATAATCCACAACCTCTAAAGCTAACTTGTAGCAGTAGTGGTCGGGGTCGAACACAGGGAGCACGATTATAACTTGTTTATCTTTGATTTATTATGATAACAAGACTAATGGGGGTTTTTATATTTAGAAAAGAAAATAATTAAGGAAAGAAAACTAATTATGGAAAATAATAGAATAGAAAAGTAAAAGCAAGAAATAGAAAGAATGAAATCATTATCTCGACGATCATGTAACCGGGATTATCATGGTAAGTTTAATTCAATCAAATCATTAATCTCACTAATTAGTCAAAACAAGTTTAAGTCCGGCGTACTCCGACAACAAACCGAGAACCTTGATCCTACTATCATAAACATGCAAACGCTAAGTTTGATTCTACTTTAAATTAATTAATTAATATGCCTATTAACTAATCTAAATCGCATTGGGATCTAGCCGAATTAATTCACATGCAATGGGCAACAAACCACAATTAGAATTCATTAAATCATTTAGTTCTAGGGACGCATGCGTATAATCATAACGTTAGCCTATTTGCTACTAAGATTTAGCAAGTAAATTTAGAGAGGGCGCGGTCAAGGTTGTCAATCTTTCCAACAACATTCTAAACTTATAGACAAAGAACTAAAATCACATAAACATGCTTTGAGAATTCAAACAAGAGATTTCATTAAAAAAACTTGAACTTACACATTGACGCCCCGATTACATGAATGAAGAATCTAGCCTCTCATGGAACAAGAACAAGCTTGAATCTTCATTTAATACATAAAGGAAAGCAAGAAAGACTAAAACTAAGAAGAATGGTGGAAAAGGGGGAGAGAGATGGACTACAAAGTTGTAGTGAATTATGTGTTGAGGGATGATTCTAAACCTACACAAAGGCCCTCTATTTGTAGTGATTCTTGGCCTTCAATTCGTGGTCATTTGGTGCTGAATTAGGTCTTCAAACAAGGAAAATTTTCAGCCAAAATAGGAAAAATTTGATTTTAGAAAACTCCCTAGCGTCACAATGCTGTGGATAGCGTCGCGACGCTCTCCCTTCAGATATGGAAAATTTGTTCTCGGATTGCCCTTGCATCGCAATGCTGTTCGCCATAGCTTCCTTATTTGGCTAGCGTCTTGACTCTGATGATGGGCGTCTCGACGGTGATGAGGCTCCAGGGGCAAAATGATCGTTTTCCGCTCCGGTTTCACTCGTTTAAGCCCCGAATTTCTTGCAAAGCTCCAGTGAGGACCTATAGACATATTATACTAATTTTAAAGCATTTTTCACAAGGAATTCAACTAAGGTAAGCAAATTGGGAGATTCTAAGTGTATAACAAATTAGACCGAGAAGTCATGTTGTTGTACAACATGCACAAGGGGTTGGATCTAAACCTTGGAAGAATCATCTGGATGGAGATCCTCTCTTGTGGGCACAAGAATGTGGGGAGACTATTCTTCCCAACCTTGATCACCAAATTATGCAGGCTTGCAGGAATAGAGCCAGAGGAGAAAGAGGAAAAAGAAGTGGCCCGTACATCCATTGACTTGAGTTTAATCAAAATGCTCATAGTCAATGCCAAGCAAAAGGCGACTTCACCGGAAAAGAAGGCTCAAGCAACTTCCCCTGTAGCTCAGCAAGCAAAATCTCCTGAAAAAACCACTGATACAGTAGGCGATGCGACCGTAAAATTAGCACATAATATATCAGATGCGGCCGCAAGTCAACTGCAATCTCCAGTCCCTAAACCACAACCTGAAGCTGATTTGCTTGTTTTAAGAAGAGACTTGGAGAAGATGAGGAGCCAGTTTAAAGAGTACCTGACCTATGCTAAAGAGAGAGATGAAGTTGTTAGAGGTGCATCTTGGAGAATGTGGTGGACGACCTAG

mRNA sequence

ATGACGCAAACAAAAGTAGAAACAGAGTGTGCGCTAGATCCTGAGGTGCAATCTAAAGAGCAAATCCTTCCACCACAACAAGAGGATGAAAATGTGCTCGAGGACCTGATCGAGCACCAGAAGGGATCCATGTTCGAAGACTTGATTGAACATGAGAAAAAACGCAATGCAGCTGAAGGAAATATTAAGAAGAGAAAAAGAAAAGACAGCTCCCCAAGGAAGCATAACATTAGGGAAGTGACTTCTGAGCTTCCCCAAGCAAAGACACCACCATCACCGCCACCTGCGAGGAGAGAACAAGCTGTTCCTCTGCCAAAGAAGACTCCAACAAAAAGGCCGAGCAAAGAAGTCCAAGTGGAGGCACATCCAGACGCTAAGACTCGTCTAGCTATCATGAAGAAGCGGGTTTTGACGTGTGAGAAAGCATTCTCCACGAAGACAGGAGTCAGGACTCTACTGTCAGGAGATTTGAAGCCAGAAGAAGCTGTCTGGCTATGCATGATCAAGAACCGAATACTTCCTTATTTGGCTAGCGTCTTGACTCTGATGATGGGCGTCTCGACGGTGATGAGGCTCCAGGGGCAAAATGATCGTTTTCCGCTCCGGTTTCACTCGTTTAAGCCCCGAATTTCTTGCAAAGCTCCAGTGAGGACCTATAGACATATTATACTAATTTTAAAGCATTTTTCACAAGGAATTCAACTAAGGCTTGCAGGAATAGAGCCAGAGGAGAAAGAGGAAAAAGAAGTGGCCCGTACATCCATTGACTTGAGTTTAATCAAAATGCTCATAGTCAATGCCAAGCAAAAGGCGACTTCACCGGAAAAGAAGGCTCAAGCAACTTCCCCTGTAGCTCAGCAAGCAAAATCTCCTGAAAAAACCACTGATACAGTAGGCGATGCGACCGTAAAATTAGCACATAATATATCAGATGCGGCCGCAAGTCAACTGCAATCTCCAGTCCCTAAACCACAACCTGAAGCTGATTTGCTTGTTTTAAGAAGAGACTTGGAGAAGATGAGGAGCCAGTTTAAAGAGTACCTGACCTATGCTAAAGAGAGAGATGAAGTTGTTAGAGGTGCATCTTGGAGAATGTGGTGGACGACCTAG

Coding sequence (CDS)

ATGACGCAAACAAAAGTAGAAACAGAGTGTGCGCTAGATCCTGAGGTGCAATCTAAAGAGCAAATCCTTCCACCACAACAAGAGGATGAAAATGTGCTCGAGGACCTGATCGAGCACCAGAAGGGATCCATGTTCGAAGACTTGATTGAACATGAGAAAAAACGCAATGCAGCTGAAGGAAATATTAAGAAGAGAAAAAGAAAAGACAGCTCCCCAAGGAAGCATAACATTAGGGAAGTGACTTCTGAGCTTCCCCAAGCAAAGACACCACCATCACCGCCACCTGCGAGGAGAGAACAAGCTGTTCCTCTGCCAAAGAAGACTCCAACAAAAAGGCCGAGCAAAGAAGTCCAAGTGGAGGCACATCCAGACGCTAAGACTCGTCTAGCTATCATGAAGAAGCGGGTTTTGACGTGTGAGAAAGCATTCTCCACGAAGACAGGAGTCAGGACTCTACTGTCAGGAGATTTGAAGCCAGAAGAAGCTGTCTGGCTATGCATGATCAAGAACCGAATACTTCCTTATTTGGCTAGCGTCTTGACTCTGATGATGGGCGTCTCGACGGTGATGAGGCTCCAGGGGCAAAATGATCGTTTTCCGCTCCGGTTTCACTCGTTTAAGCCCCGAATTTCTTGCAAAGCTCCAGTGAGGACCTATAGACATATTATACTAATTTTAAAGCATTTTTCACAAGGAATTCAACTAAGGCTTGCAGGAATAGAGCCAGAGGAGAAAGAGGAAAAAGAAGTGGCCCGTACATCCATTGACTTGAGTTTAATCAAAATGCTCATAGTCAATGCCAAGCAAAAGGCGACTTCACCGGAAAAGAAGGCTCAAGCAACTTCCCCTGTAGCTCAGCAAGCAAAATCTCCTGAAAAAACCACTGATACAGTAGGCGATGCGACCGTAAAATTAGCACATAATATATCAGATGCGGCCGCAAGTCAACTGCAATCTCCAGTCCCTAAACCACAACCTGAAGCTGATTTGCTTGTTTTAAGAAGAGACTTGGAGAAGATGAGGAGCCAGTTTAAAGAGTACCTGACCTATGCTAAAGAGAGAGATGAAGTTGTTAGAGGTGCATCTTGGAGAATGTGGTGGACGACCTAG

Protein sequence

MTQTKVETECALDPEVQSKEQILPPQQEDENVLEDLIEHQKGSMFEDLIEHEKKRNAAEGNIKKRKRKDSSPRKHNIREVTSELPQAKTPPSPPPARREQAVPLPKKTPTKRPSKEVQVEAHPDAKTRLAIMKKRVLTCEKAFSTKTGVRTLLSGDLKPEEAVWLCMIKNRILPYLASVLTLMMGVSTVMRLQGQNDRFPLRFHSFKPRISCKAPVRTYRHIILILKHFSQGIQLRLAGIEPEEKEEKEVARTSIDLSLIKMLIVNAKQKATSPEKKAQATSPVAQQAKSPEKTTDTVGDATVKLAHNISDAAASQLQSPVPKPQPEADLLVLRRDLEKMRSQFKEYLTYAKERDEVVRGASWRMWWTT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 48..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..296

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg026297.1Spg026297.1mRNA