Homology
BLAST of Spg026194 vs. NCBI nr
Match:
XP_022967967.1 (DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 1826.6 bits (4730), Expect = 0.0e+00
Identity = 907/990 (91.62%), Postives = 946/990 (95.56%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+IVKRAASR+D F SRKVIED +F+E+IRSS TL SL + C L GSR ++
Sbjct: 1 MWRNIVKRAASRRDTFF-------SRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGIN 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAISEEDLSGSEEIQELMEELS 120
F HS +VGF SN HSS+P+AFYGVLNHAK YATAAEAAISEEDLSGSEEIQELMEELS
Sbjct: 61 FFHSREVGFAKSNCAHSSEPLAFYGVLNHAKGYATAAEAAISEEDLSGSEEIQELMEELS 120
Query: 121 KQDKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
KQDKVE HFKQPKKMVDGMG+ KYN+LRKRQIKMETEAWE+AAREYQELLTDMCEQKL P
Sbjct: 121 KQDKVESHFKQPKKMVDGMGIGKYNILRKRQIKMETEAWEKAAREYQELLTDMCEQKLVP 180
Query: 181 NLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVITMHKLMGLL 240
NLPYMKSLFLGWFEPLRDAIAADQ+F KDKK RVSHAPYFDLLPADMMAVITMHKLMGLL
Sbjct: 181 NLPYMKSLFLGWFEPLRDAIAADQEFFKDKKTRVSHAPYFDLLPADMMAVITMHKLMGLL 240
Query: 241 MTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKT-KKNSNGKNTEEETEPVAEEQDKL 300
MTNSGG+SSVRVVQAACQIGEAIEHEVRIHKFFEKT KKNSN K TE +TEPV E+Q+KL
Sbjct: 241 MTNSGGNSSVRVVQAACQIGEAIEHEVRIHKFFEKTKKKNSNEKTTEGDTEPVVEDQEKL 300
Query: 301 AKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETAYIQP 360
AK+QD+LRKKVT LMKKQKLRQVRMIVKEHDD+KPWGQDAH KVGCRLIQLL ETAYIQP
Sbjct: 301 AKQQDKLRKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQDAHVKVGCRLIQLLIETAYIQP 360
Query: 361 PIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMP 420
PIDQLG+GPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMP
Sbjct: 361 PIDQLGEGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMP 420
Query: 421 MLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLGRTKWR 480
MLVPPL WTGYD+GA+LFLPSYVMRIHGAKQQREAVKR PKKQLEPV+EALDTLGRTKWR
Sbjct: 421 MLVPPLYWTGYDKGAYLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWR 480
Query: 481 VNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKENSERH 540
VNKR+LS+IDRIWASGGRLADLVDREDVPLPEEP+VEDEAEIRKWKWKVKAAKKENSERH
Sbjct: 481 VNKRILSIIDRIWASGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKVKAAKKENSERH 540
Query: 541 SQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 600
SQRCDIELKLAVARKMK+EEGFYYPHNLDFRGRAYPMHPYLNHLGSD+CRGILEFAEGRP
Sbjct: 541 SQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPYLNHLGSDMCRGILEFAEGRP 600
Query: 601 LGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWLGAEDP 660
LGESGLRWLKIHLANLYAGGVDKLSYKDR+SFTENHL EIFDSADRPLEGNRWWLGAEDP
Sbjct: 601 LGESGLRWLKIHLANLYAGGVDKLSYKDRISFTENHLDEIFDSADRPLEGNRWWLGAEDP 660
Query: 661 FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK 720
FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK
Sbjct: 661 FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK 720
Query: 721 PADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVG 780
PADVYSGIA+RVLDIMRSDAEKDPA+NPNALHARLLINQVDRKLVKQTVMTSVYGVTY+G
Sbjct: 721 PADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMG 780
Query: 781 ARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVITSE 840
ARDQIKRRLKERASIADDSQLFAA+CYAAKTTLTALGEMFEAARSIMSWLGECAKVI SE
Sbjct: 781 ARDQIKRRLKERASIADDSQLFAAACYAAKTTLTALGEMFEAARSIMSWLGECAKVIASE 840
Query: 841 NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLD 900
NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVM KRQ+TAFPPNFVHSLD
Sbjct: 841 NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMAKRQKTAFPPNFVHSLD 900
Query: 901 GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENFQ 960
GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNR+LREKFVELYEAPILENLLENFQ
Sbjct: 901 GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRLLREKFVELYEAPILENLLENFQ 960
Query: 961 KSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
KSFP L+FP LPDRGDFDLKDVLQSSYFFN
Sbjct: 961 KSFPTLKFPPLPDRGDFDLKDVLQSSYFFN 983
BLAST of Spg026194 vs. NCBI nr
Match:
XP_022149021.1 (DNA-directed RNA polymerase 1B, mitochondrial [Momordica charantia])
HSP 1 Score: 1817.7 bits (4707), Expect = 0.0e+00
Identity = 904/990 (91.31%), Postives = 947/990 (95.66%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+IVKRAASRKD S+ SSS RKVIEDH+FLEQIRSS T R LNT QLAG RR+
Sbjct: 1 MWRNIVKRAASRKDILFSQPSSSRFRKVIEDHIFLEQIRSSRTHRGLNTCRQLAGFRRIG 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAISEEDLSGSEEIQELMEELS 120
FLH PHSS+P+ F+GVLNHAK YATAAEA ISEEDLSGSEEIQELMEEL+
Sbjct: 61 FLHPDN--------PHSSEPLLFHGVLNHAKGYATAAEATISEEDLSGSEEIQELMEELT 120
Query: 121 KQDKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
KQ+K+E HFKQPK+MVDGMGVSKYNMLRKRQ+KMETEAWEEAAREYQELLTDMCEQKLAP
Sbjct: 121 KQEKLEHHFKQPKRMVDGMGVSKYNMLRKRQVKMETEAWEEAAREYQELLTDMCEQKLAP 180
Query: 181 NLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVITMHKLMGLL 240
NLPY+KSLFLGWFEPLRDAIAADQ++CKDKKNRVSHAPYFDL+PADMMAVITMHKLMGLL
Sbjct: 181 NLPYVKSLFLGWFEPLRDAIAADQEYCKDKKNRVSHAPYFDLIPADMMAVITMHKLMGLL 240
Query: 241 MTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKT-KKNSNGKNTEEETEPVAEEQDKL 300
MTNSGG+ SVRVVQAACQIGEAIEHEVRIHKFFEKT KKN N KNTE E +PVAEEQ+KL
Sbjct: 241 MTNSGGNGSVRVVQAACQIGEAIEHEVRIHKFFEKTKKKNVNEKNTEAEADPVAEEQEKL 300
Query: 301 AKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETAYIQP 360
AKEQD+LRKKVTKLMKKQKL+QVRMIVKE DD+KPWGQDAH KVGCRL+QLL ETAYIQP
Sbjct: 301 AKEQDKLRKKVTKLMKKQKLQQVRMIVKEQDDLKPWGQDAHVKVGCRLMQLLMETAYIQP 360
Query: 361 PIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMP 420
PIDQLG+GPPDIRPAFVHTLKTIT+EAQKTSRRYGVIECDPLVRRGLEKTARH VIPY+P
Sbjct: 361 PIDQLGNGPPDIRPAFVHTLKTITREAQKTSRRYGVIECDPLVRRGLEKTARHTVIPYLP 420
Query: 421 MLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLGRTKWR 480
MLVPPLNWTGYD+GA+LFLPSYVMRIHGAKQQREAVKRAPKKQLEPV+EALDTLGRTKWR
Sbjct: 421 MLVPPLNWTGYDKGAYLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVFEALDTLGRTKWR 480
Query: 481 VNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKENSERH 540
VNKRVLSVIDRIWASGGRLADLVDREDVPLPEEP+V+DEAEIRKWKWKVKAAKKENSERH
Sbjct: 481 VNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPNVDDEAEIRKWKWKVKAAKKENSERH 540
Query: 541 SQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 600
SQRCDIELKLAVARKMK+E+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRP
Sbjct: 541 SQRCDIELKLAVARKMKEEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRP 600
Query: 601 LGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWLGAEDP 660
LGESGL WLKIHLANLYAGGVDKLSYKDR+SFTENHL EIFDSADRPLEGNRWWLGAEDP
Sbjct: 601 LGESGLYWLKIHLANLYAGGVDKLSYKDRVSFTENHLEEIFDSADRPLEGNRWWLGAEDP 660
Query: 661 FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK 720
FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK
Sbjct: 661 FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK 720
Query: 721 PADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVG 780
PADVYSGIASRVLDIMRSDAEKDPA+NPNALHARLLINQVDRKLVKQTVMTSVYGVTYVG
Sbjct: 721 PADVYSGIASRVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVG 780
Query: 781 ARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVITSE 840
AR+QIKRRLKER+SI+DDS+LFAASCYAAKTTLTALGEMFEAARSIM+WLGECAKVI SE
Sbjct: 781 AREQIKRRLKERSSISDDSKLFAASCYAAKTTLTALGEMFEAARSIMNWLGECAKVIASE 840
Query: 841 NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLD 900
NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD+VMVKRQRTAFPPNFVHSLD
Sbjct: 841 NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDQVMVKRQRTAFPPNFVHSLD 900
Query: 901 GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENFQ 960
GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENFQ
Sbjct: 901 GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENFQ 960
Query: 961 KSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
KSFP L+FP LPDRGDFDLKDVLQSSYFFN
Sbjct: 961 KSFPTLKFPPLPDRGDFDLKDVLQSSYFFN 982
BLAST of Spg026194 vs. NCBI nr
Match:
KAG6574025.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1815.0 bits (4700), Expect = 0.0e+00
Identity = 902/992 (90.93%), Postives = 945/992 (95.26%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+IVKRAASR+D F SRKVIED +F+E+IRSS TL SL + C L GSR +S
Sbjct: 1 MWRNIVKRAASRRDTFF-------SRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGIS 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAISEEDLSGSEEIQELMEELS 120
F HS +VGF SNF HSS+PVAFYGVLNHAK YATAAEAAISEEDLSGSEEIQELMEELS
Sbjct: 61 FFHSREVGFAKSNFAHSSEPVAFYGVLNHAKGYATAAEAAISEEDLSGSEEIQELMEELS 120
Query: 121 KQDKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
KQDKVE HFKQPKKMVDGMGV KYN+LRKRQIKMETEAWEEAA+EYQELLTDMCEQKLAP
Sbjct: 121 KQDKVESHFKQPKKMVDGMGVGKYNILRKRQIKMETEAWEEAAKEYQELLTDMCEQKLAP 180
Query: 181 NLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVITMHKLMGLL 240
NLPY+KSLFLGWFEPLRDAIAADQ+FCK KK+RVSHAPYFDLLPADMMAVITMHKLMGLL
Sbjct: 181 NLPYIKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLL 240
Query: 241 MTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKT---KKNSNGKNTEEETEPVAEEQD 300
MT+SGG+SSVRVVQAACQIGEAIEHEVRIHKFFE T KKNSN K TE +TEPV E+Q+
Sbjct: 241 MTSSGGNSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKKNSNEKTTEGDTEPVVEDQE 300
Query: 301 KLAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETAYI 360
KLAKEQD+LRKKVT LMKKQKLRQVRMIVKEHDD+KPWGQ+AH KVGCRLIQLL ETAYI
Sbjct: 301 KLAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQEAHVKVGCRLIQLLIETAYI 360
Query: 361 QPPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPY 420
QPP+DQLG GPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPY
Sbjct: 361 QPPMDQLGGGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPY 420
Query: 421 MPMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLGRTK 480
MPMLVPPLNWTGYD+GAHLFLPSYVMRIHGAKQQREAVKR PKKQLEPV+EALDTLGRTK
Sbjct: 421 MPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTK 480
Query: 481 WRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKENSE 540
WRVNKRVLS+IDRIWASGGRLADLVDREDVPLPEEP+VEDEAEIRKWKWK+KAAKKENSE
Sbjct: 481 WRVNKRVLSIIDRIWASGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKLKAAKKENSE 540
Query: 541 RHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 600
RHSQRCDIELKLAVARKMK+EEGFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFAEG
Sbjct: 541 RHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEG 600
Query: 601 RPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWLGAE 660
RPLGESGLRWLKIHLANLYAGGVDKLSYKDR+SFTENHL EIFDSADRPLEGNRWWLGAE
Sbjct: 601 RPLGESGLRWLKIHLANLYAGGVDKLSYKDRISFTENHLDEIFDSADRPLEGNRWWLGAE 660
Query: 661 DPFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 720
DPFQCLAVCINLSEALRSPSPETT+SHMPVHQDGSCNGLQHYAALGRDKLGA AVNLVAG
Sbjct: 661 DPFQCLAVCINLSEALRSPSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAG 720
Query: 721 DKPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYGVTY 780
DKPADVYSGIA+RVLDI+RSDAEKDPA+NPNALHARLLINQVDRKLVKQTVMTSVYGVTY
Sbjct: 721 DKPADVYSGIAARVLDIIRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTY 780
Query: 781 VGARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVIT 840
+GARDQIK+RLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVI
Sbjct: 781 MGARDQIKKRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVIA 840
Query: 841 SENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHS 900
SENQPVRWTTPLGLPVVQPYRQLGRH IKTSLQ+LTLQRETDKVM KRQ+TAFPPNFVHS
Sbjct: 841 SENQPVRWTTPLGLPVVQPYRQLGRHFIKTSLQMLTLQRETDKVMAKRQKTAFPPNFVHS 900
Query: 901 LDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLEN 960
LDGSHMMMTAVAC+RAGLNFAGVHDSYWTHACDVD MNR+LREKFVELYEAPILENLLEN
Sbjct: 901 LDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLEN 960
Query: 961 FQKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
FQKSFP L+FP LPDRGDFDLKDVLQSSYFFN
Sbjct: 961 FQKSFPTLKFPPLPDRGDFDLKDVLQSSYFFN 984
BLAST of Spg026194 vs. NCBI nr
Match:
XP_022944910.1 (DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 1812.3 bits (4693), Expect = 0.0e+00
Identity = 902/992 (90.93%), Postives = 943/992 (95.06%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+IVKRAASR+D F SRKVIED +F+E+IRSS TL SL +SC L GSR +S
Sbjct: 1 MWRNIVKRAASRRDTFF-------SRKVIEDSIFVEEIRSSRTLGSLKSSCLLEGSRGIS 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAISEEDLSGSEEIQELMEELS 120
F HS +VGF SNF HSS+ VAFYGVLNHAK YATAAEAAISEEDLSGSEEIQELMEELS
Sbjct: 61 FFHSREVGFAKSNFAHSSEHVAFYGVLNHAKGYATAAEAAISEEDLSGSEEIQELMEELS 120
Query: 121 KQDKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
KQDKV HFKQPKKMVDGMGV KYN+LRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP
Sbjct: 121 KQDKVGSHFKQPKKMVDGMGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
Query: 181 NLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVITMHKLMGLL 240
NLPY+KSLFLGWFEPLRDAIAADQ+FCK KK+RVSHAPYFDLLPADMMAVITMHKLMGLL
Sbjct: 181 NLPYIKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLL 240
Query: 241 MTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKT---KKNSNGKNTEEETEPVAEEQD 300
MT+SGG+SSVRVVQAACQIGEAIEHEVRIHKFFE T KKNSN K TE +TEPV E+Q+
Sbjct: 241 MTSSGGNSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKKNSNEKTTEGDTEPVVEDQE 300
Query: 301 KLAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETAYI 360
KLAKEQD+LRKKVT LMKKQKLRQVRMIVKEHDD+KPWGQDAH KVGCRLIQLL ETAYI
Sbjct: 301 KLAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQDAHVKVGCRLIQLLIETAYI 360
Query: 361 QPPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPY 420
QPP+DQLG GPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPY
Sbjct: 361 QPPMDQLGGGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPY 420
Query: 421 MPMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLGRTK 480
MPMLVPPLNWTGYD+GAHLFLPSYVMRIHGAKQQREAVKR PKKQLEPV+EALDTLGRTK
Sbjct: 421 MPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTK 480
Query: 481 WRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKENSE 540
WRVNKRVLS+IDRIW SGGRLADLVDREDVPLPEEP+VEDEAEIRKWKWK+K AKKENSE
Sbjct: 481 WRVNKRVLSIIDRIWTSGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKLKGAKKENSE 540
Query: 541 RHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 600
RHSQRCDIELKLAVARKMK+EEGFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFAEG
Sbjct: 541 RHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEG 600
Query: 601 RPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWLGAE 660
RPLGESGLRWLKIHLANLYAGGVDKLSYKDR+SFTENHL EIFDSADRPLEGNRWWLGAE
Sbjct: 601 RPLGESGLRWLKIHLANLYAGGVDKLSYKDRISFTENHLDEIFDSADRPLEGNRWWLGAE 660
Query: 661 DPFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 720
DPFQCLAVCINLSEALRSPSPETT+SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 661 DPFQCLAVCINLSEALRSPSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 720
Query: 721 DKPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYGVTY 780
DKPADVYSGIA+RVLDI+RSDAEKDPA+NPNALHARLLINQVDRKLVKQTVMTSVYGVTY
Sbjct: 721 DKPADVYSGIAARVLDIIRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTY 780
Query: 781 VGARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVIT 840
+GARDQIK+RLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVI
Sbjct: 781 MGARDQIKKRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVIA 840
Query: 841 SENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHS 900
SENQPVRWTTPLGLPVVQPYRQLGRH IKTSLQ+LTLQRETDKVM KRQ+TAFPPNFVHS
Sbjct: 841 SENQPVRWTTPLGLPVVQPYRQLGRHFIKTSLQMLTLQRETDKVMAKRQKTAFPPNFVHS 900
Query: 901 LDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLEN 960
LDGSHMMMTAVAC+RAGLNFAGVHDSYWTHACDVD MNR+LREKFVELYEAPILENLLEN
Sbjct: 901 LDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLEN 960
Query: 961 FQKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
FQKSFP L+FP LPDRGDFDLKDVLQSSYFFN
Sbjct: 961 FQKSFPTLKFPPLPDRGDFDLKDVLQSSYFFN 984
BLAST of Spg026194 vs. NCBI nr
Match:
XP_023542836.1 (DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023542837.1 DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1807.3 bits (4680), Expect = 0.0e+00
Identity = 899/992 (90.62%), Postives = 942/992 (94.96%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+IVKRAASR+D F SRKVIED + +E+IRSS TL SL + C L GSR +S
Sbjct: 1 MWRNIVKRAASRRDTFF-------SRKVIEDSISVEEIRSSRTLGSLKSCCLLEGSRGIS 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAISEEDLSGSEEIQELMEELS 120
F HS +VGF SNF HSS+PVAFYGVLNHAK YATAAEAAISEEDLSGSEEIQELMEELS
Sbjct: 61 FFHSREVGFAKSNFAHSSEPVAFYGVLNHAKGYATAAEAAISEEDLSGSEEIQELMEELS 120
Query: 121 KQDKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
KQDKVE HFKQPKKMVDGM V KYN+LRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP
Sbjct: 121 KQDKVESHFKQPKKMVDGMRVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
Query: 181 NLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVITMHKLMGLL 240
NLPY+KSLFLGWFEPLRDAIAADQ+FCK KK+RVSHAPYFDLLPADMMAVITMHKLMGLL
Sbjct: 181 NLPYIKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLL 240
Query: 241 MTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFE---KTKKNSNGKNTEEETEPVAEEQD 300
MTNSGG+SSVRVVQAACQIGEAIEHEVRIHKFFE K K+NSN K TE +TEPV E+Q+
Sbjct: 241 MTNSGGNSSVRVVQAACQIGEAIEHEVRIHKFFENMKKKKRNSNEKTTEGDTEPVVEDQE 300
Query: 301 KLAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETAYI 360
K+AKEQD+LRKKVT LMKKQKLRQVRMIVKEHD +KPWGQDAH KVGCRLIQLL ETAYI
Sbjct: 301 KVAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYI 360
Query: 361 QPPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPY 420
QPP+DQLG GPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPY
Sbjct: 361 QPPMDQLGGGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPY 420
Query: 421 MPMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLGRTK 480
MPMLVPPLNWTGYD+GAHLFLPSYVMRIHGAKQQREAVKR PKKQLEPV+EALDTLGRTK
Sbjct: 421 MPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTK 480
Query: 481 WRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKENSE 540
WRVNKRVLS+IDRIW SGGRLADLVDREDVPLPEEP+VEDEAEIRKWKWK+KAAKKENSE
Sbjct: 481 WRVNKRVLSIIDRIWTSGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKLKAAKKENSE 540
Query: 541 RHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 600
RHSQRCDIELKLAVARKMK+EEGFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFAEG
Sbjct: 541 RHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEG 600
Query: 601 RPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWLGAE 660
RPLGESGLRWLKIHLANLYAGGVDKLSYKDR+SFTENHL EIFDSADRPLEGNRWWLGAE
Sbjct: 601 RPLGESGLRWLKIHLANLYAGGVDKLSYKDRISFTENHLDEIFDSADRPLEGNRWWLGAE 660
Query: 661 DPFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 720
DPFQCLAVCINLSEALRSPSPETT+SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 661 DPFQCLAVCINLSEALRSPSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 720
Query: 721 DKPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYGVTY 780
DKPADVYSGIA+RVLDI+RSDAEKDPA+NPNALHARLLINQVDRKLVKQTVMTSVYGVTY
Sbjct: 721 DKPADVYSGIAARVLDIIRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTY 780
Query: 781 VGARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVIT 840
+GARDQIK+RLKERASIADDSQLFAASCYAA+TTLTALGEMFEAARSIMSWLGECAKVI
Sbjct: 781 MGARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIA 840
Query: 841 SENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHS 900
SENQPVRWTTPLGLPVVQPYRQLGRH IKTSLQ+LTLQRETDKVM KRQ+TAFPPNFVHS
Sbjct: 841 SENQPVRWTTPLGLPVVQPYRQLGRHFIKTSLQMLTLQRETDKVMAKRQKTAFPPNFVHS 900
Query: 901 LDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLEN 960
LDGSHMMMTAVAC+RAGLNFAGVHDSYWTHACDVD MNR+LREKFVELYEAPILENLLEN
Sbjct: 901 LDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLEN 960
Query: 961 FQKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
FQKSFP L+FP LPDRGDFDLKDVLQSSYFFN
Sbjct: 961 FQKSFPTLKFPPLPDRGDFDLKDVLQSSYFFN 984
BLAST of Spg026194 vs. ExPASy Swiss-Prot
Match:
Q8L6J5 (DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT1-TOM PE=2 SV=2)
HSP 1 Score: 1458.7 bits (3775), Expect = 0.0e+00
Identity = 749/1014 (73.87%), Postives = 835/1014 (82.35%), Query Frame = 0
Query: 1 MWRSIVKRAASRK-----DAFLSELS--SSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQL 60
MWR I K A SRK D+ L S SSS K E+ + L S
Sbjct: 1 MWRYISKHAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTHPNLGLSQNSIFS 60
Query: 61 AGSRRVSFL---------HSHKVGFTNSNFPHSSDPVAF-----YGVLNHAKSYATAAEA 120
SR+V L + H NS F G L +SY +AAEA
Sbjct: 61 RISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRLRSYGSAAEA 120
Query: 121 AI--SEEDLSGSEEIQELMEELSKQDKVEPHFKQPK--KMVDGMGVSKYNMLRKRQIKME 180
+ SEED+ +EIQEL+EE+ K+++ QPK K + GMGV KYN LR+RQIK+E
Sbjct: 121 IVSTSEEDI---DEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFLRRRQIKVE 180
Query: 181 TEAWEEAAREYQELLTDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVS 240
TEAWEEAA+EYQELL DMCEQKLAPNLPYMKSLFLGWFEPLRDAIAA+Q C + KNR +
Sbjct: 181 TEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGA 240
Query: 241 HAPYFDLLPADMMAVITMHKLMGLLMTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEK 300
+AP+FD LPA+MMAVITMHKLMGLLMT GG S RVVQAA IGEAIEHE RIH+F EK
Sbjct: 241 YAPFFDQLPAEMMAVITMHKLMGLLMT-GGGTGSARVVQAASYIGEAIEHEARIHRFLEK 300
Query: 301 TKKNSNGKNTEEETEPVAEEQDKLAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPW 360
TKK++ EET + KE++RLRKKV LMKKQKLRQVR IVK+ DD KPW
Sbjct: 301 TKKSNALSGDLEET------PGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPW 360
Query: 361 GQDAHAKVGCRLIQLLTETAYIQPPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGV 420
GQD KVGCRLIQ+L ETAYIQPP DQL DGPPDIRPAFVHTLKT+ E K SRRYGV
Sbjct: 361 GQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMKGSRRYGV 420
Query: 421 IECDPLVRRGLEKTARHMVIPYMPMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAV 480
I+CDPLVR+GL+KTARHMVIPYMPMLVPP +W GYD+G +LFLPSY+MR HGAKQQREAV
Sbjct: 421 IQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAV 480
Query: 481 KRAPKKQLEPVYEALDTLGRTKWRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSV 540
KR PKKQLEPV++ALDTLG TKWRVN++VL ++DRIWASGGRLADLVDREDVPLPE P
Sbjct: 481 KRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDT 540
Query: 541 EDEAEIRKWKWKVKAAKKENSERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYP 600
EDEAEIRKWKWKVK KKEN ERHSQRCDIELKLAVARKMKDE+GFYYPHNLDFRGRAYP
Sbjct: 541 EDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYP 600
Query: 601 MHPYLNHLGSDLCRGILEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENH 660
MHPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKIHLAN+Y GGVDKLSY+ R++F+ENH
Sbjct: 601 MHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENH 660
Query: 661 LGEIFDSADRPLEGNRWWLGAEDPFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNG 720
L +IFDSA+RPLEG RWWLGAEDPFQCLA CIN++EALRSPSPET IS+MP+HQDGSCNG
Sbjct: 661 LEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNG 720
Query: 721 LQHYAALGRDKLGAAAVNLVAGDKPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLL 780
LQHYAALGRDKLGAAAVNLVAGDKPADVYSGIA+RVLDIM+ DA KDPA++PN + ARLL
Sbjct: 721 LQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLL 780
Query: 781 INQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERASIADDSQLFAASCYAAKTTLTAL 840
INQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER I DD++LFAA+CYAAKTTLTAL
Sbjct: 781 INQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTAL 840
Query: 841 GEMFEAARSIMSWLGECAKVITSENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQ 900
GEMFEAARSIMSWLG+CAK+I EN PVRWTTPLGLPVVQPYR+LGRHLIKTSLQ+LTLQ
Sbjct: 841 GEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQ 900
Query: 901 RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMN 960
RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHACDVD+MN
Sbjct: 901 RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMN 960
Query: 961 RILREKFVELYEAPILENLLENFQKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
+ILREKFVELY+APILENLLE+FQ+SFP L+FP LP+RGDFDL++VL+S YFFN
Sbjct: 961 KILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
BLAST of Spg026194 vs. ExPASy Swiss-Prot
Match:
Q93Y94 (DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT1 PE=2 SV=1)
HSP 1 Score: 1449.5 bits (3751), Expect = 0.0e+00
Identity = 747/1016 (73.52%), Postives = 843/1016 (82.97%), Query Frame = 0
Query: 1 MWRSIVKRAASRK-----DAFLSELS--SSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQL 60
MWR I K+A SRK D+ L S SSS K E+ ++ L S
Sbjct: 1 MWRYISKQAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNSIFS 60
Query: 61 AGSRRVSFLHSHKVGFTNSNFPH---------SSDPVAF-------YGVLNHAKSYATAA 120
SR+V H + +S PH SS F G L +SY +AA
Sbjct: 61 RISRKVR--HLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSAA 120
Query: 121 E--AAISEEDLSGSEEIQELMEELSKQDKVEPHFKQPK--KMVDGMGVSKYNMLRKRQIK 180
E A+ SEED+ +EIQEL+EE++K+++ QPK K + GMGV KYN+LR+RQIK
Sbjct: 121 EAIASTSEEDI---DEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQIK 180
Query: 181 METEAWEEAAREYQELLTDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNR 240
+ETEAWEEAA+EYQELL DMCEQKLAPNLPYMKSLFLGWFEPLRDAIAA+Q C + KNR
Sbjct: 181 VETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNR 240
Query: 241 VSHAPYFDLLPADMMAVITMHKLMGLLMTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFF 300
++AP+FD LPA+MMAVITMHKLMGLLMT GG S RVVQAA IGEAIEHE RIH+F
Sbjct: 241 GAYAPFFDQLPAEMMAVITMHKLMGLLMT-GGGTGSARVVQAASHIGEAIEHEARIHRFL 300
Query: 301 EKTKKNSNGKNTEEETEPVAEEQDKLAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIK 360
EKTKK SN + + E P + KE++R+RKKV LMKKQKL+QVR IVK+ DD K
Sbjct: 301 EKTKK-SNALSGDLEDTP-----GDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEK 360
Query: 361 PWGQDAHAKVGCRLIQLLTETAYIQPPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRY 420
PWGQD KVGCRLIQ+L ETAYIQPP DQL D PPDIRPAFVHTLKT+ E K SRRY
Sbjct: 361 PWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV--ETMKGSRRY 420
Query: 421 GVIECDPLVRRGLEKTARHMVIPYMPMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQRE 480
GVI+CDPLVR+GL+KTARHMVIPYMPMLVPP +W GYD+GA+LFLPSY+MR HGAKQQRE
Sbjct: 421 GVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQRE 480
Query: 481 AVKRAPKKQLEPVYEALDTLGRTKWRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEP 540
AVKR PKKQLEPV++ALDTLG TKWR+N++VL ++DRIWASGGRLADLVDREDVPLPEEP
Sbjct: 481 AVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEP 540
Query: 541 SVEDEAEIRKWKWKVKAAKKENSERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRA 600
EDEA+IRKWKWKVK KKEN ERHSQRCDIELKLAVARKMKDE+GFYYPHNLDFRGRA
Sbjct: 541 DAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRA 600
Query: 601 YPMHPYLNHLGSDLCRGILEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTE 660
YPMHPYLNHLGSDLCRGILEFAEGRPLG+SGLRWLKIHLAN+Y GGVDKLSY+ R++F+E
Sbjct: 601 YPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSE 660
Query: 661 NHLGEIFDSADRPLEGNRWWLGAEDPFQCLAVCINLSEALRSPSPETTISHMPVHQDGSC 720
NH+ +IFDSA+RPLEG RWWLGAEDPFQCLA CIN++EALRSPSPET IS+MP+HQDGSC
Sbjct: 661 NHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSC 720
Query: 721 NGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIASRVLDIMRSDAEKDPASNPNALHAR 780
NGLQHYAALGRD LGAAAVNLVAGDKPADVYSGIA+RVLDIM+ DA KDPA++PN + AR
Sbjct: 721 NGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRAR 780
Query: 781 LLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERASIADDSQLFAASCYAAKTTLT 840
LLINQVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKER I DD++LFAA+CYAAKTTLT
Sbjct: 781 LLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLT 840
Query: 841 ALGEMFEAARSIMSWLGECAKVITSENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLT 900
ALGEMFEAARSIMSWLG+CAK+I EN PVRWTTPLGLPVVQPYR+LGRHLIKTSLQ+LT
Sbjct: 841 ALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILT 900
Query: 901 LQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDE 960
LQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK +GL+FAGVHDSYWTHA DVD+
Sbjct: 901 LQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQ 960
Query: 961 MNRILREKFVELYEAPILENLLENFQKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
MN+ILREKFVELY+APILENLLE+FQ+SFP L+FP LP+RGDFDL++VL+S YFFN
Sbjct: 961 MNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
BLAST of Spg026194 vs. ExPASy Swiss-Prot
Match:
Q8VWF8 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT2 PE=2 SV=2)
HSP 1 Score: 1396.3 bits (3613), Expect = 0.0e+00
Identity = 704/1008 (69.84%), Postives = 827/1008 (82.04%), Query Frame = 0
Query: 1 MWRSIVKRAASR---KDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSL-NTSCQLAGS 60
MWR+I+K+ +SR K F S+ + S +D +F + + RSL SC
Sbjct: 35 MWRNIIKQLSSRTPQKLLFSSKNRTYSFLGFGQDSIFKDNTK----FRSLIPISCS---- 94
Query: 61 RRVSFLHSHKVGFTN-----SNFPHSSDPVAFYGVLNH---AKSYATAAEAAI-----SE 120
+ +GF N S P+ V N+ KSYA+ AEA +E
Sbjct: 95 -------NIVMGFQNLGEYLPGDEFLSRPLIKNQVNNNFCCRKSYASVAEAVAVSSTDAE 154
Query: 121 EDLSGSEEIQELMEELSKQDKVEPHFKQPKK--MVDGMGVSKYNMLRKRQIKMETEAWEE 180
ED+S +E+ EL+ EL K++K + F++ K+ + GMG KY L++RQ+K+ETEAWE+
Sbjct: 155 EDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQ 214
Query: 181 AAREYQELLTDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFD 240
AA+EY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD IA +Q+ C K++ ++A YF
Sbjct: 215 AAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFY 274
Query: 241 LLPADMMAVITMHKLMGLLMTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKTKKNSN 300
LPADMMAVITMHKLMGLLMT G H + RVVQAA IG+AIE EVRIH F EKTKK
Sbjct: 275 QLPADMMAVITMHKLMGLLMT-GGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKA 334
Query: 301 GKNTEEETEPVAEEQDKLAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHA 360
K+ ++ E+ + + +EQ++LRKKVT LMKKQKLR V IV+ DD KPWGQDA A
Sbjct: 335 EKDKQK------EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARA 394
Query: 361 KVGCRLIQLLTETAYIQPPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPL 420
KVG RLI LL +TAYIQPP +QL PPDIRPAFVH+++T+ KE + SRRYG+I+CD L
Sbjct: 395 KVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSASRRYGIIQCDEL 454
Query: 421 VRRGLEKTARHMVIPYMPMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKK 480
V +GLE+TARHMVIPYMPMLVPP+ WTGYD+G HL+LPSYVMR HGA+QQREAVKRA +
Sbjct: 455 VFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRN 514
Query: 481 QLEPVYEALDTLGRTKWRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEI 540
QL+PV+EALDTLG TKWR+NKRVLSV+DRIWA GGRLADLVDR+D PLPEEP EDEA
Sbjct: 515 QLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALR 574
Query: 541 RKWKWKVKAAKKENSERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN 600
KW+WKVK+ KKEN ERHSQRCDIELKLAVARKMKDEE F+YPHN+DFRGRAYPMHP+LN
Sbjct: 575 TKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLN 634
Query: 601 HLGSDLCRGILEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFD 660
HLGSD+CRG+LEFAEGRPLGESGLRWLKIHLANL+AGGV+KLS + R+ FTENH+ +IFD
Sbjct: 635 HLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFD 694
Query: 661 SADRPLEGNRWWLGAEDPFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAA 720
S+D+PLEG RWWL AEDPFQCLAVCINLSEA+RS SPET++SH+PVHQDGSCNGLQHYAA
Sbjct: 695 SSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAA 754
Query: 721 LGRDKLGAAAVNLVAGDKPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDR 780
LGRDKLGAAAVNLVAG+KPADVYSGIA+RVLDIM+ DA++DPA P+A+ AR+L+NQVDR
Sbjct: 755 LGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDR 814
Query: 781 KLVKQTVMTSVYGVTYVGARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEA 840
KLVKQTVMTSVYGVTY+GARDQIKRRLKER +IADDS+LF A+CYAAK TLTALGEMFEA
Sbjct: 815 KLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEA 874
Query: 841 ARSIMSWLGECAKVITSENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKV 900
ARSIM+WLGECAK+I SEN+PVRWTTPLGLPVVQPYR++GRHLIKTSLQ+LTLQRET+KV
Sbjct: 875 ARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKV 934
Query: 901 MVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREK 960
MVKRQRTAFPPNF+HSLDGSHMMMTAVAC+RAGLNFAGVHDSYWTHACDVD++NRILREK
Sbjct: 935 MVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREK 994
Query: 961 FVELYEAPILENLLENFQKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
FVELYEAPILE LLE+FQ S+P L FP LP+RGDFD++DVL+S YFFN
Sbjct: 995 FVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020
BLAST of Spg026194 vs. ExPASy Swiss-Prot
Match:
Q8L6J3 (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT2-TOM PE=2 SV=2)
HSP 1 Score: 1392.1 bits (3602), Expect = 0.0e+00
Identity = 703/1009 (69.67%), Postives = 825/1009 (81.76%), Query Frame = 0
Query: 1 MWRSIVKRAASR---KDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSL-NTSCQLAGS 60
MWR+I+K+ +SR K F S+ + S +D VF + + RSL SC
Sbjct: 35 MWRNIIKQLSSRTPQKLLFSSKNRTYSFLGFGQDSVFKDNTK----FRSLIPISCS---- 94
Query: 61 RRVSFLHSHKVGFTNSNFPHSSDPVAFYGVLNH---------AKSYATAAEAAI-----S 120
+ +GF N D +L + KSYA+ AEA +
Sbjct: 95 -------NIVMGFQNLGEYLPGDEFLSRPLLKNQVNSNDFCCRKSYASVAEAVAVSSTDA 154
Query: 121 EEDLSGSEEIQELMEELSKQDKVEPHFKQPKK--MVDGMGVSKYNMLRKRQIKMETEAWE 180
EED+S +E+QEL+ EL K++K + F++ K+ + GMG KY L++RQ+K+ETEAWE
Sbjct: 155 EEDVSVVDEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWE 214
Query: 181 EAAREYQELLTDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYF 240
+AA+EY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD IA +Q+ C K++ ++A Y
Sbjct: 215 QAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYL 274
Query: 241 DLLPADMMAVITMHKLMGLLMTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKTKKNS 300
LPADMMAVITMHKLMGLLMT G H + RVVQAA IG+AIE EVRIH F EKTKK
Sbjct: 275 YQLPADMMAVITMHKLMGLLMT-GGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQK 334
Query: 301 NGKNTEEETEPVAEEQDKLAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAH 360
K+ ++ E+ + + +EQ++LRKKVT LMKKQKLR V IV+ DD KPWGQDA
Sbjct: 335 AEKDKQK------EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAK 394
Query: 361 AKVGCRLIQLLTETAYIQPPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDP 420
AKVG RLI+LL +TAYIQPP +QL PPDIRPAF+H+++T+ KE + SRRYG+I+CD
Sbjct: 395 AKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGIIQCDE 454
Query: 421 LVRRGLEKTARHMVIPYMPMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPK 480
LV +GLE+TARHMVIPYMPMLVPP+ WTGYD+G HL+LPSYVMR HGA+QQREAVKRA +
Sbjct: 455 LVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASR 514
Query: 481 KQLEPVYEALDTLGRTKWRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAE 540
QL+PV+EALDTLG TKWR+NKRVLSVIDRIWA GGRLADLVDR+D PLPEEP EDEA
Sbjct: 515 NQLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEAL 574
Query: 541 IRKWKWKVKAAKKENSERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL 600
KW+WKVK+ KKEN ERHSQRCDIELKLAVARKMKDEEGF+YPHN+DFRGRAYPMHP+L
Sbjct: 575 RTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 634
Query: 601 NHLGSDLCRGILEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIF 660
NHLGSD+CRG+L FAEGRPLGESGLRWLKIHLANL+AGGV+KLS + R++FTENH+ +IF
Sbjct: 635 NHLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIF 694
Query: 661 DSADRPLEGNRWWLGAEDPFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYA 720
DSAD+PLEG RWWL AEDPFQCLAVCINLSEA+RS SPET+ISH+PVHQDGSCNGLQHYA
Sbjct: 695 DSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYA 754
Query: 721 ALGRDKLGAAAVNLVAGDKPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVD 780
ALGRD+LGAAAVNLVAG+KPADVYSGIA+RVLDIM+ DA++DPA P+A+ AR L+NQVD
Sbjct: 755 ALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVD 814
Query: 781 RKLVKQTVMTSVYGVTYVGARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFE 840
RKLVKQTVMTSVYGVTY+GARDQIKRRLKER +IADDS+LF A+CYAAK TLTALGEMFE
Sbjct: 815 RKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFE 874
Query: 841 AARSIMSWLGECAKVITSENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDK 900
AARSIM+WLGECAK+I SEN+PVRWTTPLGLPVVQPYR++GRHLIKTSLQ+LTLQ+ET+K
Sbjct: 875 AARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQQETEK 934
Query: 901 VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILRE 960
VMVKRQRTAFPPNF+HSLDGSHMMMTAVAC+RAGLNFAGVHDSYWTHACDVD++NRILRE
Sbjct: 935 VMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILRE 994
Query: 961 KFVELYEAPILENLLENFQKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
KFVELYE PILE LLE+FQ S+P L FP LP+RGDFDL+DVL+S YFFN
Sbjct: 995 KFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021
BLAST of Spg026194 vs. ExPASy Swiss-Prot
Match:
P92969 (DNA-directed RNA polymerase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPOT1 PE=2 SV=1)
HSP 1 Score: 1334.3 bits (3452), Expect = 0.0e+00
Identity = 671/998 (67.23%), Postives = 797/998 (79.86%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+I+ RA+ RK FLS+ SSS + H + ++R G L S+N L+G R
Sbjct: 1 MWRNILGRASLRKVKFLSDSSSSGT------HYPVNRVR--GILSSVN----LSGVRNGL 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAIS---EEDLSGSEEIQELME 120
++ S+F H G + YATAA+A S E++ SGS+E+ EL+
Sbjct: 61 SINPVNEMGGLSSFRH--------GQCYVFEGYATAAQAIDSTDPEDESSGSDEVNELIT 120
Query: 121 ELSKQ-----DKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTD 180
E+ K+ K PK+++ GMG K+ ML++RQ+KMETE WE AARE +E+L D
Sbjct: 121 EMEKETERIRKKARLAAIPPKRVIAGMGAQKFYMLKQRQVKMETEEWERAARECREILAD 180
Query: 181 MCEQKLAPNLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVIT 240
MCEQKLAPNLPYMKSLFLGWFEP+R+AI D D K KK ++ +AP+ + LPAD MAVIT
Sbjct: 181 MCEQKLAPNLPYMKSLFLGWFEPVRNAIQDDLDTFKIKKGKIPYAPFMEQLPADKMAVIT 240
Query: 241 MHKLMGLLMTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFE-KTKKNSNGKNTEEETEP 300
MHK+MGLLMTN+ G V++V AA QIGEA+E EVRI+ F + K KKN+ K E E
Sbjct: 241 MHKMMGLLMTNAEGVGIVKLVNAATQIGEAVEQEVRINSFLQKKNKKNATDKTINTEAEN 300
Query: 301 VAEEQDKLAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLL 360
V+EE +AKE ++ RK+VT LM+K KLRQV+ +V++HD KPWGQ+A KVG RLIQLL
Sbjct: 301 VSEE--IVAKETEKARKQVTVLMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARLIQLL 360
Query: 361 TETAYIQPPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTAR 420
E AYIQPP +Q DGPPDIRPAF +T+T E KTSRRYG IECDPLV +GL+K+AR
Sbjct: 361 MENAYIQPPAEQFDDGPPDIRPAFKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDKSAR 420
Query: 421 HMVIPYMPMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALD 480
HMVIPY+PML+PP NWTGYD+GAH FLPSYVMR HGAKQQR +KR PK+QLEPVYEALD
Sbjct: 421 HMVIPYLPMLIPPQNWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALD 480
Query: 481 TLGRTKWRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAA 540
TLG TKW++NK+VLS++DRIWA+GGR+ LVDREDVP+PEEP ED+ + + W+W+ K A
Sbjct: 481 TLGNTKWKINKKVLSLVDRIWANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKA 540
Query: 541 KKENSERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 600
K+N+ERHSQRCDIELKL VARKMKDEEGFYYPHN+DFRGRAYP+HPYLNHLGSDLCRGI
Sbjct: 541 IKQNNERHSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGI 600
Query: 601 LEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNR 660
LEF EG+PLG+SGLRWLKIH+ANLYAGGVDKL+Y+DR++FTE+HL +IFDS+DRPLEG R
Sbjct: 601 LEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKR 660
Query: 661 WWLGAEDPFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAA 720
WWL AEDPFQCLA CINLSEALRSP PE ISH+P+HQDGSCNGLQHYAALGRDKLGA A
Sbjct: 661 WWLNAEDPFQCLAACINLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADA 720
Query: 721 VNLVAGDKPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTS 780
VNLV G+KPADVY+ IA+RVL IM+ DAE+DP + PNA +A+L+++QVDRKLVKQTVMTS
Sbjct: 721 VNLVTGEKPADVYTEIAARVLKIMQQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTS 780
Query: 781 VYGVTYVGARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGE 840
VYGVTY GARDQIK+RLKER + DDS F ASCYAAK TL AL EMFEAAR+I SW G+
Sbjct: 781 VYGVTYSGARDQIKKRLKERGTFEDDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGD 840
Query: 841 CAKVITSENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFP 900
CAK+I SEN V WTTPLGLPVVQPYR+ GRHL+KT+LQVLTL RETDKVM +RQ TAF
Sbjct: 841 CAKIIASENNAVCWTTPLGLPVVQPYRKPGRHLVKTTLQVLTLSRETDKVMARRQMTAFA 900
Query: 901 PNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPIL 960
PNF+HSLDGSHMMMTAVAC RAGL+FAGVHDS+WTHACDVD MN ILREKFVELYE PIL
Sbjct: 901 PNFIHSLDGSHMMMTAVACNRAGLSFAGVHDSFWTHACDVDVMNTILREKFVELYEKPIL 960
Query: 961 ENLLENFQKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
ENLLE+FQKSFP + FP LP+RGDFDL+ VL+S+YFFN
Sbjct: 961 ENLLESFQKSFPDISFPPLPERGDFDLRKVLESTYFFN 976
BLAST of Spg026194 vs. ExPASy TrEMBL
Match:
A0A6J1HS83 (DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111467347 PE=3 SV=1)
HSP 1 Score: 1826.6 bits (4730), Expect = 0.0e+00
Identity = 907/990 (91.62%), Postives = 946/990 (95.56%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+IVKRAASR+D F SRKVIED +F+E+IRSS TL SL + C L GSR ++
Sbjct: 1 MWRNIVKRAASRRDTFF-------SRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGIN 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAISEEDLSGSEEIQELMEELS 120
F HS +VGF SN HSS+P+AFYGVLNHAK YATAAEAAISEEDLSGSEEIQELMEELS
Sbjct: 61 FFHSREVGFAKSNCAHSSEPLAFYGVLNHAKGYATAAEAAISEEDLSGSEEIQELMEELS 120
Query: 121 KQDKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
KQDKVE HFKQPKKMVDGMG+ KYN+LRKRQIKMETEAWE+AAREYQELLTDMCEQKL P
Sbjct: 121 KQDKVESHFKQPKKMVDGMGIGKYNILRKRQIKMETEAWEKAAREYQELLTDMCEQKLVP 180
Query: 181 NLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVITMHKLMGLL 240
NLPYMKSLFLGWFEPLRDAIAADQ+F KDKK RVSHAPYFDLLPADMMAVITMHKLMGLL
Sbjct: 181 NLPYMKSLFLGWFEPLRDAIAADQEFFKDKKTRVSHAPYFDLLPADMMAVITMHKLMGLL 240
Query: 241 MTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKT-KKNSNGKNTEEETEPVAEEQDKL 300
MTNSGG+SSVRVVQAACQIGEAIEHEVRIHKFFEKT KKNSN K TE +TEPV E+Q+KL
Sbjct: 241 MTNSGGNSSVRVVQAACQIGEAIEHEVRIHKFFEKTKKKNSNEKTTEGDTEPVVEDQEKL 300
Query: 301 AKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETAYIQP 360
AK+QD+LRKKVT LMKKQKLRQVRMIVKEHDD+KPWGQDAH KVGCRLIQLL ETAYIQP
Sbjct: 301 AKQQDKLRKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQDAHVKVGCRLIQLLIETAYIQP 360
Query: 361 PIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMP 420
PIDQLG+GPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMP
Sbjct: 361 PIDQLGEGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMP 420
Query: 421 MLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLGRTKWR 480
MLVPPL WTGYD+GA+LFLPSYVMRIHGAKQQREAVKR PKKQLEPV+EALDTLGRTKWR
Sbjct: 421 MLVPPLYWTGYDKGAYLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWR 480
Query: 481 VNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKENSERH 540
VNKR+LS+IDRIWASGGRLADLVDREDVPLPEEP+VEDEAEIRKWKWKVKAAKKENSERH
Sbjct: 481 VNKRILSIIDRIWASGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKVKAAKKENSERH 540
Query: 541 SQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 600
SQRCDIELKLAVARKMK+EEGFYYPHNLDFRGRAYPMHPYLNHLGSD+CRGILEFAEGRP
Sbjct: 541 SQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPYLNHLGSDMCRGILEFAEGRP 600
Query: 601 LGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWLGAEDP 660
LGESGLRWLKIHLANLYAGGVDKLSYKDR+SFTENHL EIFDSADRPLEGNRWWLGAEDP
Sbjct: 601 LGESGLRWLKIHLANLYAGGVDKLSYKDRISFTENHLDEIFDSADRPLEGNRWWLGAEDP 660
Query: 661 FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK 720
FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK
Sbjct: 661 FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK 720
Query: 721 PADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVG 780
PADVYSGIA+RVLDIMRSDAEKDPA+NPNALHARLLINQVDRKLVKQTVMTSVYGVTY+G
Sbjct: 721 PADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMG 780
Query: 781 ARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVITSE 840
ARDQIKRRLKERASIADDSQLFAA+CYAAKTTLTALGEMFEAARSIMSWLGECAKVI SE
Sbjct: 781 ARDQIKRRLKERASIADDSQLFAAACYAAKTTLTALGEMFEAARSIMSWLGECAKVIASE 840
Query: 841 NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLD 900
NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVM KRQ+TAFPPNFVHSLD
Sbjct: 841 NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMAKRQKTAFPPNFVHSLD 900
Query: 901 GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENFQ 960
GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNR+LREKFVELYEAPILENLLENFQ
Sbjct: 901 GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRLLREKFVELYEAPILENLLENFQ 960
Query: 961 KSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
KSFP L+FP LPDRGDFDLKDVLQSSYFFN
Sbjct: 961 KSFPTLKFPPLPDRGDFDLKDVLQSSYFFN 983
BLAST of Spg026194 vs. ExPASy TrEMBL
Match:
A0A6J1D747 (DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111017540 PE=3 SV=1)
HSP 1 Score: 1817.7 bits (4707), Expect = 0.0e+00
Identity = 904/990 (91.31%), Postives = 947/990 (95.66%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+IVKRAASRKD S+ SSS RKVIEDH+FLEQIRSS T R LNT QLAG RR+
Sbjct: 1 MWRNIVKRAASRKDILFSQPSSSRFRKVIEDHIFLEQIRSSRTHRGLNTCRQLAGFRRIG 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAISEEDLSGSEEIQELMEELS 120
FLH PHSS+P+ F+GVLNHAK YATAAEA ISEEDLSGSEEIQELMEEL+
Sbjct: 61 FLHPDN--------PHSSEPLLFHGVLNHAKGYATAAEATISEEDLSGSEEIQELMEELT 120
Query: 121 KQDKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
KQ+K+E HFKQPK+MVDGMGVSKYNMLRKRQ+KMETEAWEEAAREYQELLTDMCEQKLAP
Sbjct: 121 KQEKLEHHFKQPKRMVDGMGVSKYNMLRKRQVKMETEAWEEAAREYQELLTDMCEQKLAP 180
Query: 181 NLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVITMHKLMGLL 240
NLPY+KSLFLGWFEPLRDAIAADQ++CKDKKNRVSHAPYFDL+PADMMAVITMHKLMGLL
Sbjct: 181 NLPYVKSLFLGWFEPLRDAIAADQEYCKDKKNRVSHAPYFDLIPADMMAVITMHKLMGLL 240
Query: 241 MTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKT-KKNSNGKNTEEETEPVAEEQDKL 300
MTNSGG+ SVRVVQAACQIGEAIEHEVRIHKFFEKT KKN N KNTE E +PVAEEQ+KL
Sbjct: 241 MTNSGGNGSVRVVQAACQIGEAIEHEVRIHKFFEKTKKKNVNEKNTEAEADPVAEEQEKL 300
Query: 301 AKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETAYIQP 360
AKEQD+LRKKVTKLMKKQKL+QVRMIVKE DD+KPWGQDAH KVGCRL+QLL ETAYIQP
Sbjct: 301 AKEQDKLRKKVTKLMKKQKLQQVRMIVKEQDDLKPWGQDAHVKVGCRLMQLLMETAYIQP 360
Query: 361 PIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMP 420
PIDQLG+GPPDIRPAFVHTLKTIT+EAQKTSRRYGVIECDPLVRRGLEKTARH VIPY+P
Sbjct: 361 PIDQLGNGPPDIRPAFVHTLKTITREAQKTSRRYGVIECDPLVRRGLEKTARHTVIPYLP 420
Query: 421 MLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLGRTKWR 480
MLVPPLNWTGYD+GA+LFLPSYVMRIHGAKQQREAVKRAPKKQLEPV+EALDTLGRTKWR
Sbjct: 421 MLVPPLNWTGYDKGAYLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVFEALDTLGRTKWR 480
Query: 481 VNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKENSERH 540
VNKRVLSVIDRIWASGGRLADLVDREDVPLPEEP+V+DEAEIRKWKWKVKAAKKENSERH
Sbjct: 481 VNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPNVDDEAEIRKWKWKVKAAKKENSERH 540
Query: 541 SQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 600
SQRCDIELKLAVARKMK+E+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRP
Sbjct: 541 SQRCDIELKLAVARKMKEEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRP 600
Query: 601 LGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWLGAEDP 660
LGESGL WLKIHLANLYAGGVDKLSYKDR+SFTENHL EIFDSADRPLEGNRWWLGAEDP
Sbjct: 601 LGESGLYWLKIHLANLYAGGVDKLSYKDRVSFTENHLEEIFDSADRPLEGNRWWLGAEDP 660
Query: 661 FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK 720
FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK
Sbjct: 661 FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK 720
Query: 721 PADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVG 780
PADVYSGIASRVLDIMRSDAEKDPA+NPNALHARLLINQVDRKLVKQTVMTSVYGVTYVG
Sbjct: 721 PADVYSGIASRVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVG 780
Query: 781 ARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVITSE 840
AR+QIKRRLKER+SI+DDS+LFAASCYAAKTTLTALGEMFEAARSIM+WLGECAKVI SE
Sbjct: 781 AREQIKRRLKERSSISDDSKLFAASCYAAKTTLTALGEMFEAARSIMNWLGECAKVIASE 840
Query: 841 NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLD 900
NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD+VMVKRQRTAFPPNFVHSLD
Sbjct: 841 NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDQVMVKRQRTAFPPNFVHSLD 900
Query: 901 GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENFQ 960
GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENFQ
Sbjct: 901 GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENFQ 960
Query: 961 KSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
KSFP L+FP LPDRGDFDLKDVLQSSYFFN
Sbjct: 961 KSFPTLKFPPLPDRGDFDLKDVLQSSYFFN 982
BLAST of Spg026194 vs. ExPASy TrEMBL
Match:
A0A6J1FZD9 (DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111449300 PE=3 SV=1)
HSP 1 Score: 1812.3 bits (4693), Expect = 0.0e+00
Identity = 902/992 (90.93%), Postives = 943/992 (95.06%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+IVKRAASR+D F SRKVIED +F+E+IRSS TL SL +SC L GSR +S
Sbjct: 1 MWRNIVKRAASRRDTFF-------SRKVIEDSIFVEEIRSSRTLGSLKSSCLLEGSRGIS 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAISEEDLSGSEEIQELMEELS 120
F HS +VGF SNF HSS+ VAFYGVLNHAK YATAAEAAISEEDLSGSEEIQELMEELS
Sbjct: 61 FFHSREVGFAKSNFAHSSEHVAFYGVLNHAKGYATAAEAAISEEDLSGSEEIQELMEELS 120
Query: 121 KQDKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
KQDKV HFKQPKKMVDGMGV KYN+LRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP
Sbjct: 121 KQDKVGSHFKQPKKMVDGMGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
Query: 181 NLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVITMHKLMGLL 240
NLPY+KSLFLGWFEPLRDAIAADQ+FCK KK+RVSHAPYFDLLPADMMAVITMHKLMGLL
Sbjct: 181 NLPYIKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLL 240
Query: 241 MTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKT---KKNSNGKNTEEETEPVAEEQD 300
MT+SGG+SSVRVVQAACQIGEAIEHEVRIHKFFE T KKNSN K TE +TEPV E+Q+
Sbjct: 241 MTSSGGNSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKKNSNEKTTEGDTEPVVEDQE 300
Query: 301 KLAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETAYI 360
KLAKEQD+LRKKVT LMKKQKLRQVRMIVKEHDD+KPWGQDAH KVGCRLIQLL ETAYI
Sbjct: 301 KLAKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQDAHVKVGCRLIQLLIETAYI 360
Query: 361 QPPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPY 420
QPP+DQLG GPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPY
Sbjct: 361 QPPMDQLGGGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPY 420
Query: 421 MPMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLGRTK 480
MPMLVPPLNWTGYD+GAHLFLPSYVMRIHGAKQQREAVKR PKKQLEPV+EALDTLGRTK
Sbjct: 421 MPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTK 480
Query: 481 WRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKENSE 540
WRVNKRVLS+IDRIW SGGRLADLVDREDVPLPEEP+VEDEAEIRKWKWK+K AKKENSE
Sbjct: 481 WRVNKRVLSIIDRIWTSGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKLKGAKKENSE 540
Query: 541 RHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 600
RHSQRCDIELKLAVARKMK+EEGFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFAEG
Sbjct: 541 RHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEG 600
Query: 601 RPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWLGAE 660
RPLGESGLRWLKIHLANLYAGGVDKLSYKDR+SFTENHL EIFDSADRPLEGNRWWLGAE
Sbjct: 601 RPLGESGLRWLKIHLANLYAGGVDKLSYKDRISFTENHLDEIFDSADRPLEGNRWWLGAE 660
Query: 661 DPFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 720
DPFQCLAVCINLSEALRSPSPETT+SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 661 DPFQCLAVCINLSEALRSPSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 720
Query: 721 DKPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYGVTY 780
DKPADVYSGIA+RVLDI+RSDAEKDPA+NPNALHARLLINQVDRKLVKQTVMTSVYGVTY
Sbjct: 721 DKPADVYSGIAARVLDIIRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTY 780
Query: 781 VGARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVIT 840
+GARDQIK+RLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVI
Sbjct: 781 MGARDQIKKRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVIA 840
Query: 841 SENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHS 900
SENQPVRWTTPLGLPVVQPYRQLGRH IKTSLQ+LTLQRETDKVM KRQ+TAFPPNFVHS
Sbjct: 841 SENQPVRWTTPLGLPVVQPYRQLGRHFIKTSLQMLTLQRETDKVMAKRQKTAFPPNFVHS 900
Query: 901 LDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLEN 960
LDGSHMMMTAVAC+RAGLNFAGVHDSYWTHACDVD MNR+LREKFVELYEAPILENLLEN
Sbjct: 901 LDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLEN 960
Query: 961 FQKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
FQKSFP L+FP LPDRGDFDLKDVLQSSYFFN
Sbjct: 961 FQKSFPTLKFPPLPDRGDFDLKDVLQSSYFFN 984
BLAST of Spg026194 vs. ExPASy TrEMBL
Match:
A0A6J1FZC4 (DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111449299 PE=3 SV=1)
HSP 1 Score: 1805.8 bits (4676), Expect = 0.0e+00
Identity = 899/990 (90.81%), Postives = 939/990 (94.85%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+IVKRAASR+D F SRKVIED +F+E+IRSS TL SL + C L GSR +S
Sbjct: 1 MWRNIVKRAASRRDTFF-------SRKVIEDSIFVEEIRSSRTLGSLKSCCLLEGSRGIS 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAISEEDLSGSEEIQELMEELS 120
F HS +VGF SNF HSSDPVAFYGVLNHA YATAAEAAISEEDLSGSEEIQELMEELS
Sbjct: 61 FFHSREVGFAKSNFAHSSDPVAFYGVLNHANGYATAAEAAISEEDLSGSEEIQELMEELS 120
Query: 121 KQDKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
KQDKVE +F+QPKKMVDGMGV KYN+LRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP
Sbjct: 121 KQDKVESYFQQPKKMVDGMGVGKYNILRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
Query: 181 NLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVITMHKLMGLL 240
NLPYMKSLFLGWFEPLRDAIAADQ+FCK KK+RVSHAPYFDLLPADMMAVITMHKLMGLL
Sbjct: 181 NLPYMKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLL 240
Query: 241 MTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKT-KKNSNGKNTEEETEPVAEEQDKL 300
MT+SGG+SSVRVVQAACQIGEAIEHEVRIHKFFE T KK SN K TE +TEPV ++Q+KL
Sbjct: 241 MTSSGGNSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVKDQEKL 300
Query: 301 AKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETAYIQP 360
AKEQD+LRKKVT LMKKQKLRQVRMIVKEHD +KPWGQDAH KVGCRLIQLL ETAYIQP
Sbjct: 301 AKEQDKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQP 360
Query: 361 PIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMP 420
P+DQLG GPPDIRPAFVHTLKTIT EAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMP
Sbjct: 361 PMDQLGGGPPDIRPAFVHTLKTITTEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYMP 420
Query: 421 MLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLGRTKWR 480
MLVPPLNWTGYD+GAHLFLPSYVMRIHGAKQQREAVKR PKKQLEPV+EALDTLGRTKWR
Sbjct: 421 MLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTLGRTKWR 480
Query: 481 VNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKENSERH 540
VNKRVLS+IDRIWASGGRLADLVDRED PLPEEP+VEDE EIRKWKWK+KAAKKENSERH
Sbjct: 481 VNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKKENSERH 540
Query: 541 SQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 600
SQRCDIELKLAVARKMK+EEGFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFAEGRP
Sbjct: 541 SQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRP 600
Query: 601 LGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWLGAEDP 660
LGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHL EIFDSADRPLEGNRWWLGAEDP
Sbjct: 601 LGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLDEIFDSADRPLEGNRWWLGAEDP 660
Query: 661 FQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK 720
FQCLAVCINLSEALRSPSPETT+SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK
Sbjct: 661 FQCLAVCINLSEALRSPSPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDK 720
Query: 721 PADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVG 780
PADVYSGIA+RVLDIMRSDAEKDPA+NPNALHARLLINQVDRKLVKQTVMTSVYGVTY+G
Sbjct: 721 PADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYMG 780
Query: 781 ARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVITSE 840
ARDQIK+RLKERASIADDSQLFAASCYAA+TTLTALGEMFEAARSIMSWLGECAKVI SE
Sbjct: 781 ARDQIKKRLKERASIADDSQLFAASCYAARTTLTALGEMFEAARSIMSWLGECAKVIASE 840
Query: 841 NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLD 900
NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVL LQRETDKVM RQ+TAFPPNFVHSLD
Sbjct: 841 NQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLALQRETDKVMATRQKTAFPPNFVHSLD 900
Query: 901 GSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENFQ 960
GSHMMMTAVAC+RAGLNFAGVHDSYWTHACDVD MNR+LREKFVELYEAPILENLLENFQ
Sbjct: 901 GSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDVMNRLLREKFVELYEAPILENLLENFQ 960
Query: 961 KSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
KSFP L+FP LPDRGDFDLKDVLQSSYFFN
Sbjct: 961 KSFPTLKFPPLPDRGDFDLKDVLQSSYFFN 982
BLAST of Spg026194 vs. ExPASy TrEMBL
Match:
A0A1S3BF59 (DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489205 PE=3 SV=1)
HSP 1 Score: 1611.3 bits (4171), Expect = 0.0e+00
Identity = 792/991 (79.92%), Postives = 881/991 (88.90%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+++KRAASRK SELSSS+SRKV EDH+FL+QIR S +L +LNT CQ S R+S
Sbjct: 1 MWRNVLKRAASRKATLFSELSSSTSRKVTEDHIFLDQIRYSRSLETLNTCCQSGDSSRIS 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAISEEDLSGSEEIQELMEELS 120
FLH KVGFTNSNFPHSS+PVAFYGVLNHA+ YATAAEAAISE DLSGSEEIQE+ME +S
Sbjct: 61 FLHPQKVGFTNSNFPHSSNPVAFYGVLNHAEGYATAAEAAISEGDLSGSEEIQEIMEGIS 120
Query: 121 KQDKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKLAP 180
KQDKVEPHFK+PK+MVD G + Y+MLRKRQIK+ETEAWEEAAREYQEL+ ++CEQKL+P
Sbjct: 121 KQDKVEPHFKKPKRMVDRKGEATYDMLRKRQIKIETEAWEEAAREYQELIAEICEQKLSP 180
Query: 181 NLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRV--SHAPYFDLLPADMMAVITMHKLMG 240
NLPYMKSLFLGWF+P RDAI A+Q+ K K SHAPYF+LLPADMMAVITMHKL+G
Sbjct: 181 NLPYMKSLFLGWFQPFRDAIVAEQESIKSKSKNFCPSHAPYFNLLPADMMAVITMHKLVG 240
Query: 241 LLMTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKTKKNSNGKNTEEETEPVAEEQDK 300
++M++ G+ V+V QAA IGEAIE+EVRI FFEK K + +K
Sbjct: 241 VMMSDFEGNGIVKVTQAATHIGEAIENEVRIRHFFEKKK-----------------QPEK 300
Query: 301 LAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETAYIQ 360
LA++QD+LRKKVTKLMK+QKL++V IVK+HDD+KPWG D H KVGC LI+ L ETAYIQ
Sbjct: 301 LAEDQDKLRKKVTKLMKQQKLQKVNFIVKKHDDLKPWGTDVHVKVGCTLIKFLIETAYIQ 360
Query: 361 PPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYM 420
PP+DQLGD PPD+RPAFVH LKT KE QK RRYGVIECDPLVRRG+ KTA HMVIPYM
Sbjct: 361 PPVDQLGDAPPDLRPAFVHYLKTSPKETQKLGRRYGVIECDPLVRRGMVKTAGHMVIPYM 420
Query: 421 PMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLGRTKW 480
PMLVPPLNWTGYD+GA+ FLPSYVMRI GAKQQREAV+RAP+ QLEPV++ALD LG TKW
Sbjct: 421 PMLVPPLNWTGYDKGAYFFLPSYVMRIRGAKQQREAVRRAPRTQLEPVFKALDILGSTKW 480
Query: 481 RVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKENSER 540
RVNKRVLS+I+RIWASGGRLADLVDRED+PLPEEPSVEDEAEIRKWKWKVKA KKENSER
Sbjct: 481 RVNKRVLSIIERIWASGGRLADLVDREDLPLPEEPSVEDEAEIRKWKWKVKAVKKENSER 540
Query: 541 HSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR 600
HSQRCD+ELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHP LNH+GSDLCRGILEFAEGR
Sbjct: 541 HSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPNLNHIGSDLCRGILEFAEGR 600
Query: 601 PLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWLGAED 660
PLGESGLRWLKIHLANLYAGGVDKLSYKDR+SFTENHL EIFDSADRPLEG+RWWLGAED
Sbjct: 601 PLGESGLRWLKIHLANLYAGGVDKLSYKDRISFTENHLDEIFDSADRPLEGSRWWLGAED 660
Query: 661 PFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGD 720
PFQCLAVCINLSEALRSPSPETTISH+P+HQDGSCNGLQHYAALGRDKLGA AVNL AGD
Sbjct: 661 PFQCLAVCINLSEALRSPSPETTISHLPIHQDGSCNGLQHYAALGRDKLGAEAVNLAAGD 720
Query: 721 KPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYGVTYV 780
KPADVYSGIASRVLDI+RSDA KDPAS PNALHA+LLINQVDRKLVKQTVMTSVYGVT V
Sbjct: 721 KPADVYSGIASRVLDIIRSDALKDPASYPNALHAKLLINQVDRKLVKQTVMTSVYGVTLV 780
Query: 781 GARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVITS 840
GA+DQI +RLKERASI ++ QLF+ASCYAAKTTLTA+GEMFE A+SIM+WLGECAKVI S
Sbjct: 781 GAKDQISQRLKERASIGNERQLFSASCYAAKTTLTAIGEMFEEAKSIMNWLGECAKVIAS 840
Query: 841 ENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSL 900
EN+ VRWTTPLGLPVVQPYR+ GRH++KTSLQVL+LQRETDKVM RQ++AFPPNF+HSL
Sbjct: 841 ENKDVRWTTPLGLPVVQPYRKPGRHIVKTSLQVLSLQRETDKVMAARQKSAFPPNFIHSL 900
Query: 901 DGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENF 960
D SHMMMTA+ACK AGL+FAGVHDSYWTHACDVDEMNRILR+KFVELYEAPILENLL+ F
Sbjct: 901 DSSHMMMTALACKNAGLHFAGVHDSYWTHACDVDEMNRILRQKFVELYEAPILENLLKEF 960
Query: 961 QKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
+KSFP +FP LP GDFDLK+VL+S YFFN
Sbjct: 961 KKSFPNTKFPPLPAGGDFDLKEVLKSPYFFN 974
BLAST of Spg026194 vs. TAIR 10
Match:
AT1G68990.1 (male gametophyte defective 3 )
HSP 1 Score: 1334.3 bits (3452), Expect = 0.0e+00
Identity = 671/998 (67.23%), Postives = 797/998 (79.86%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+I+ RA+ RK FLS+ SSS + H + ++R G L S+N L+G R
Sbjct: 1 MWRNILGRASLRKVKFLSDSSSSGT------HYPVNRVR--GILSSVN----LSGVRNGL 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAIS---EEDLSGSEEIQELME 120
++ S+F H G + YATAA+A S E++ SGS+E+ EL+
Sbjct: 61 SINPVNEMGGLSSFRH--------GQCYVFEGYATAAQAIDSTDPEDESSGSDEVNELIT 120
Query: 121 ELSKQ-----DKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTD 180
E+ K+ K PK+++ GMG K+ ML++RQ+KMETE WE AARE +E+L D
Sbjct: 121 EMEKETERIRKKARLAAIPPKRVIAGMGAQKFYMLKQRQVKMETEEWERAARECREILAD 180
Query: 181 MCEQKLAPNLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVIT 240
MCEQKLAPNLPYMKSLFLGWFEP+R+AI D D K KK ++ +AP+ + LPAD MAVIT
Sbjct: 181 MCEQKLAPNLPYMKSLFLGWFEPVRNAIQDDLDTFKIKKGKIPYAPFMEQLPADKMAVIT 240
Query: 241 MHKLMGLLMTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFE-KTKKNSNGKNTEEETEP 300
MHK+MGLLMTN+ G V++V AA QIGEA+E EVRI+ F + K KKN+ K E E
Sbjct: 241 MHKMMGLLMTNAEGVGIVKLVNAATQIGEAVEQEVRINSFLQKKNKKNATDKTINTEAEN 300
Query: 301 VAEEQDKLAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLL 360
V+EE +AKE ++ RK+VT LM+K KLRQV+ +V++HD KPWGQ+A KVG RLIQLL
Sbjct: 301 VSEE--IVAKETEKARKQVTVLMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARLIQLL 360
Query: 361 TETAYIQPPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTAR 420
E AYIQPP +Q DGPPDIRPAF +T+T E KTSRRYG IECDPLV +GL+K+AR
Sbjct: 361 MENAYIQPPAEQFDDGPPDIRPAFKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDKSAR 420
Query: 421 HMVIPYMPMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALD 480
HMVIPY+PML+PP NWTGYD+GAH FLPSYVMR HGAKQQR +KR PK+QLEPVYEALD
Sbjct: 421 HMVIPYLPMLIPPQNWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALD 480
Query: 481 TLGRTKWRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAA 540
TLG TKW++NK+VLS++DRIWA+GGR+ LVDREDVP+PEEP ED+ + + W+W+ K A
Sbjct: 481 TLGNTKWKINKKVLSLVDRIWANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKA 540
Query: 541 KKENSERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 600
K+N+ERHSQRCDIELKL VARKMKDEEGFYYPHN+DFRGRAYP+HPYLNHLGSDLCRGI
Sbjct: 541 IKQNNERHSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGI 600
Query: 601 LEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNR 660
LEF EG+PLG+SGLRWLKIH+ANLYAGGVDKL+Y+DR++FTE+HL +IFDS+DRPLEG R
Sbjct: 601 LEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKR 660
Query: 661 WWLGAEDPFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAA 720
WWL AEDPFQCLA CINLSEALRSP PE ISH+P+HQDGSCNGLQHYAALGRDKLGA A
Sbjct: 661 WWLNAEDPFQCLAACINLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADA 720
Query: 721 VNLVAGDKPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTS 780
VNLV G+KPADVY+ IA+RVL IM+ DAE+DP + PNA +A+L+++QVDRKLVKQTVMTS
Sbjct: 721 VNLVTGEKPADVYTEIAARVLKIMQQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTS 780
Query: 781 VYGVTYVGARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGE 840
VYGVTY GARDQIK+RLKER + DDS F ASCYAAK TL AL EMFEAAR+I SW G+
Sbjct: 781 VYGVTYSGARDQIKKRLKERGTFEDDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGD 840
Query: 841 CAKVITSENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFP 900
CAK+I SEN V WTTPLGLPVVQPYR+ GRHL+KT+LQVLTL RETDKVM +RQ TAF
Sbjct: 841 CAKIIASENNAVCWTTPLGLPVVQPYRKPGRHLVKTTLQVLTLSRETDKVMARRQMTAFA 900
Query: 901 PNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPIL 960
PNF+HSLDGSHMMMTAVAC RAGL+FAGVHDS+WTHACDVD MN ILREKFVELYE PIL
Sbjct: 901 PNFIHSLDGSHMMMTAVACNRAGLSFAGVHDSFWTHACDVDVMNTILREKFVELYEKPIL 960
Query: 961 ENLLENFQKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
ENLLE+FQKSFP + FP LP+RGDFDL+ VL+S+YFFN
Sbjct: 961 ENLLESFQKSFPDISFPPLPERGDFDLRKVLESTYFFN 976
BLAST of Spg026194 vs. TAIR 10
Match:
AT1G68990.2 (male gametophyte defective 3 )
HSP 1 Score: 1327.4 bits (3434), Expect = 0.0e+00
Identity = 671/1005 (66.77%), Postives = 797/1005 (79.30%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+I+ RA+ RK FLS+ SSS + H + ++R G L S+N L+G R
Sbjct: 1 MWRNILGRASLRKVKFLSDSSSSGT------HYPVNRVR--GILSSVN----LSGVRNGL 60
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAIS---EEDLSGSEEIQELME 120
++ S+F H G + YATAA+A S E++ SGS+E+ EL+
Sbjct: 61 SINPVNEMGGLSSFRH--------GQCYVFEGYATAAQAIDSTDPEDESSGSDEVNELIT 120
Query: 121 ELSKQ-----DKVEPHFKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTD 180
E+ K+ K PK+++ GMG K+ ML++RQ+KMETE WE AARE +E+L D
Sbjct: 121 EMEKETERIRKKARLAAIPPKRVIAGMGAQKFYMLKQRQVKMETEEWERAARECREILAD 180
Query: 181 MCEQKLAPNLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVIT 240
MCEQKLAPNLPYMKSLFLGWFEP+R+AI D D K KK ++ +AP+ + LPAD MAVIT
Sbjct: 181 MCEQKLAPNLPYMKSLFLGWFEPVRNAIQDDLDTFKIKKGKIPYAPFMEQLPADKMAVIT 240
Query: 241 MHKLMGLLMTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFE-KTKKNSNGKNTEEETEP 300
MHK+MGLLMTN+ G V++V AA QIGEA+E EVRI+ F + K KKN+ K E E
Sbjct: 241 MHKMMGLLMTNAEGVGIVKLVNAATQIGEAVEQEVRINSFLQKKNKKNATDKTINTEAEN 300
Query: 301 VAEEQDKLAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLL 360
V+EE +AKE ++ RK+VT LM+K KLRQV+ +V++HD KPWGQ+A KVG RLIQLL
Sbjct: 301 VSEE--IVAKETEKARKQVTVLMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARLIQLL 360
Query: 361 TETAYIQPPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKT-- 420
E AYIQPP +Q DGPPDIRPAF +T+T E KTSRRYG IECDPLV +GL+K+
Sbjct: 361 MENAYIQPPAEQFDDGPPDIRPAFKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDKSVS 420
Query: 421 -----ARHMVIPYMPMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLE 480
ARHMVIPY+PML+PP NWTGYD+GAH FLPSYVMR HGAKQQR +KR PK+QLE
Sbjct: 421 RIVDYARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLE 480
Query: 481 PVYEALDTLGRTKWRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKW 540
PVYEALDTLG TKW++NK+VLS++DRIWA+GGR+ LVDREDVP+PEEP ED+ + + W
Sbjct: 481 PVYEALDTLGNTKWKINKKVLSLVDRIWANGGRIGGLVDREDVPIPEEPEREDQEKFKNW 540
Query: 541 KWKVKAAKKENSERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLG 600
+W+ K A K+N+ERHSQRCDIELKL VARKMKDEEGFYYPHN+DFRGRAYP+HPYLNHLG
Sbjct: 541 RWESKKAIKQNNERHSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLG 600
Query: 601 SDLCRGILEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSAD 660
SDLCRGILEF EG+PLG+SGLRWLKIH+ANLYAGGVDKL+Y+DR++FTE+HL +IFDS+D
Sbjct: 601 SDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYEDRIAFTESHLEDIFDSSD 660
Query: 661 RPLEGNRWWLGAEDPFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGR 720
RPLEG RWWL AEDPFQCLA CINLSEALRSP PE ISH+P+HQDGSCNGLQHYAALGR
Sbjct: 661 RPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAALGR 720
Query: 721 DKLGAAAVNLVAGDKPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLV 780
DKLGA AVNLV G+KPADVY+ IA+RVL IM+ DAE+DP + PNA +A+L+++QVDRKLV
Sbjct: 721 DKLGADAVNLVTGEKPADVYTEIAARVLKIMQQDAEEDPETFPNATYAKLMLDQVDRKLV 780
Query: 781 KQTVMTSVYGVTYVGARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARS 840
KQTVMTSVYGVTY GARDQIK+RLKER + DDS F ASCYAAK TL AL EMFEAAR+
Sbjct: 781 KQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSLTFHASCYAAKITLKALEEMFEAARA 840
Query: 841 IMSWLGECAKVITSENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVK 900
I SW G+CAK+I SEN V WTTPLGLPVVQPYR+ GRHL+KT+LQVLTL RETDKVM +
Sbjct: 841 IKSWFGDCAKIIASENNAVCWTTPLGLPVVQPYRKPGRHLVKTTLQVLTLSRETDKVMAR 900
Query: 901 RQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVE 960
RQ TAF PNF+HSLDGSHMMMTAVAC RAGL+FAGVHDS+WTHACDVD MN ILREKFVE
Sbjct: 901 RQMTAFAPNFIHSLDGSHMMMTAVACNRAGLSFAGVHDSFWTHACDVDVMNTILREKFVE 960
Query: 961 LYEAPILENLLENFQKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
LYE PILENLLE+FQKSFP + FP LP+RGDFDL+ VL+S+YFFN
Sbjct: 961 LYEKPILENLLESFQKSFPDISFPPLPERGDFDLRKVLESTYFFN 983
BLAST of Spg026194 vs. TAIR 10
Match:
AT5G15700.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 1284.6 bits (3323), Expect = 0.0e+00
Identity = 650/991 (65.59%), Postives = 775/991 (78.20%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+I K+A SR A L+ +SS + ++ + S L + C G R +S
Sbjct: 40 MWRNIAKQAISRSAARLN-VSSQTRGLLVSSPESIFSKNLSFRFPVLGSPCHGKGFRCLS 99
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAISEEDLSGSEEIQELMEELS 120
G T S G L A+ Y + AE + D+ E+ EL++E+
Sbjct: 100 -------GITRRE-EFSKSERCLSGTL--ARGYTSVAEEEVLSTDVEEEPEVDELLKEMK 159
Query: 121 KQDKVEPH--FKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKL 180
K+ K E H ++ K+ GMG +K+ L +RQ+K+ETE WE AA EY ELLTDMCEQKL
Sbjct: 160 KEKKRESHRSWRMKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKL 219
Query: 181 APNLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVITMHKLMG 240
APNLPY+KSLFLGWFEPLRDAIA DQ+ + K++ ++A Y D LPAD ++VITMHKLMG
Sbjct: 220 APNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLMG 279
Query: 241 LLMTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKTKKNSNGKNTEEETEPVAEEQDK 300
LMT G + V+VV AAC +G+AIE E+RI F +K KK ++ E E +
Sbjct: 280 HLMT-GGDNGCVKVVHAACTVGDAIEQEIRICTFLDKKKKG------DDNEESGGVENET 339
Query: 301 LAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETAYIQ 360
KEQD+LRKKV +L+KKQKL VR I++ HD KPW D AKVG RLI+LL TAYIQ
Sbjct: 340 SMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQ 399
Query: 361 PPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYM 420
P DQ + PD+RPAFVHT K + K + + R+YGVIECDPLVR+GLEK+ R+ V+PYM
Sbjct: 400 SPADQQDNDLPDVRPAFVHTFK-VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAVMPYM 459
Query: 421 PMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLGRTKW 480
PMLVPPL W+GYD+GA+LFL SY+M+ HGAKQQREA+K APK QL+PV+EALDTLG TKW
Sbjct: 460 PMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLGSTKW 519
Query: 481 RVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKENSER 540
RVNKRVL+V+DRIW+SGG +AD+VDR DVPLPE+P EDE ++KWKW+VK+AKK NSER
Sbjct: 520 RVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKVNSER 579
Query: 541 HSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR 600
HSQRCD ELKL+VARKMKDEE FYYPHN+DFRGRAYPM P+LNHLGSDLCRG+LEFAEGR
Sbjct: 580 HSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGR 639
Query: 601 PLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWLGAED 660
P+G SGLRWLKIHLANLYAGGVDKLS R++FTENHL +IFDSADRPLEG+RWWL AED
Sbjct: 640 PMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWLQAED 699
Query: 661 PFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGD 720
PFQCLAVCI+L+EALRSPSPET +SH+P+HQDGSCNGLQHYAALGRD LGA AVNLVAG+
Sbjct: 700 PFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGE 759
Query: 721 KPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYGVTYV 780
KPADVYSGIA+RVLDIMR DA++DP P AL AR L+NQVDRKLVKQTVMTSVYGVTY+
Sbjct: 760 KPADVYSGIATRVLDIMRRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYGVTYI 819
Query: 781 GARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVITS 840
GARDQIKRRLKER+ D+ ++F A+CYAAK TL A+ EMF+AAR+IM W GECAK+I S
Sbjct: 820 GARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAKIIAS 879
Query: 841 ENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSL 900
EN+ VRWTTPLGLPVVQPY Q+G L+KTSLQ L+LQ ETD+V+V+RQRTAFPPNF+HSL
Sbjct: 880 ENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNFIHSL 939
Query: 901 DGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENF 960
DGSHMMMTAVACKRAG+ FAGVHDS+WTHACDVD++N ILREKFVELY PILENLLE+F
Sbjct: 940 DGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENLLESF 999
Query: 961 QKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
++SFP L+FP LP+RGD DLK VL S YFFN
Sbjct: 1000 EQSFPHLDFPPLPERGDLDLKVVLDSPYFFN 1011
BLAST of Spg026194 vs. TAIR 10
Match:
AT5G15700.2 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 1271.1 bits (3288), Expect = 0.0e+00
Identity = 643/981 (65.55%), Postives = 768/981 (78.29%), Query Frame = 0
Query: 1 MWRSIVKRAASRKDAFLSELSSSSSRKVIEDHVFLEQIRSSGTLRSLNTSCQLAGSRRVS 60
MWR+I K+A SR A L+ +SS + ++ + S L + C G R +S
Sbjct: 40 MWRNIAKQAISRSAARLN-VSSQTRGLLVSSPESIFSKNLSFRFPVLGSPCHGKGFRCLS 99
Query: 61 FLHSHKVGFTNSNFPHSSDPVAFYGVLNHAKSYATAAEAAISEEDLSGSEEIQELMEELS 120
G T S G L A+ Y + AE + D+ E+ EL++E+
Sbjct: 100 -------GITRRE-EFSKSERCLSGTL--ARGYTSVAEEEVLSTDVEEEPEVDELLKEMK 159
Query: 121 KQDKVEPH--FKQPKKMVDGMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKL 180
K+ K E H ++ K+ GMG +K+ L +RQ+K+ETE WE AA EY ELLTDMCEQKL
Sbjct: 160 KEKKRESHRSWRMKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKL 219
Query: 181 APNLPYMKSLFLGWFEPLRDAIAADQDFCKDKKNRVSHAPYFDLLPADMMAVITMHKLMG 240
APNLPY+KSLFLGWFEPLRDAIA DQ+ + K++ ++A Y D LPAD ++VITMHKLMG
Sbjct: 220 APNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLMG 279
Query: 241 LLMTNSGGHSSVRVVQAACQIGEAIEHEVRIHKFFEKTKKNSNGKNTEEETEPVAEEQDK 300
LMT G + V+VV AAC +G+AIE E+RI F +K KK ++ E E +
Sbjct: 280 HLMT-GGDNGCVKVVHAACTVGDAIEQEIRICTFLDKKKKG------DDNEESGGVENET 339
Query: 301 LAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETAYIQ 360
KEQD+LRKKV +L+KKQKL VR I++ HD KPW D AKVG RLI+LL TAYIQ
Sbjct: 340 SMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQ 399
Query: 361 PPIDQLGDGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKTARHMVIPYM 420
P DQ + PD+RPAFVHT K + K + + R+YGVIECDPLVR+GLEK+ R+ V+PYM
Sbjct: 400 SPADQQDNDLPDVRPAFVHTFK-VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAVMPYM 459
Query: 421 PMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLGRTKW 480
PMLVPPL W+GYD+GA+LFL SY+M+ HGAKQQREA+K APK QL+PV+EALDTLG TKW
Sbjct: 460 PMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLGSTKW 519
Query: 481 RVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKENSER 540
RVNKRVL+V+DRIW+SGG +AD+VDR DVPLPE+P EDE ++KWKW+VK+AKK NSER
Sbjct: 520 RVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKVNSER 579
Query: 541 HSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR 600
HSQRCD ELKL+VARKMKDEE FYYPHN+DFRGRAYPM P+LNHLGSDLCRG+LEFAEGR
Sbjct: 580 HSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGR 639
Query: 601 PLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWLGAED 660
P+G SGLRWLKIHLANLYAGGVDKLS R++FTENHL +IFDSADRPLEG+RWWL AED
Sbjct: 640 PMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWLQAED 699
Query: 661 PFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGD 720
PFQCLAVCI+L+EALRSPSPET +SH+P+HQDGSCNGLQHYAALGRD LGA AVNLVAG+
Sbjct: 700 PFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNLVAGE 759
Query: 721 KPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYGVTYV 780
KPADVYSGIA+RVLDIMR DA++DP P AL AR L+NQVDRKLVKQTVMTSVYGVTY+
Sbjct: 760 KPADVYSGIATRVLDIMRRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYGVTYI 819
Query: 781 GARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAKVITS 840
GARDQIKRRLKER+ D+ ++F A+CYAAK TL A+ EMF+AAR+IM W GECAK+I S
Sbjct: 820 GARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAKIIAS 879
Query: 841 ENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSL 900
EN+ VRWTTPLGLPVVQPY Q+G L+KTSLQ L+LQ ETD+V+V+RQRTAFPPNF+HSL
Sbjct: 880 ENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNFIHSL 939
Query: 901 DGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLENF 960
DGSHMMMTAVACKRAG+ FAGVHDS+WTHACDVD++N ILREKFVELY PILENLLE+F
Sbjct: 940 DGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENLLESF 999
Query: 961 QKSFPALEFPRLPDRGDFDLK 980
++SFP L+FP LP+RGD DLK
Sbjct: 1000 EQSFPHLDFPPLPERGDLDLK 1001
BLAST of Spg026194 vs. TAIR 10
Match:
AT2G24120.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 578/935 (61.82%), Postives = 708/935 (75.72%), Query Frame = 0
Query: 78 SDPVAFYGVL-----NHAKSYATAAEAAISEEDLSGSEEIQEL--MEELSKQDK--VEPH 137
S+ V F+G L N SYA + A E+L E L L QD +
Sbjct: 75 SNSVHFHGNLIESFENQDSSYAGTIKGASLIEELENPVERNGLSGRRRLFMQDPPWISAL 134
Query: 138 F-KQPKKMVD--------GMGVSKYNMLRKRQIKMETEAWEEAAREYQELLTDMCEQKLA 197
F K KMVD + K++ LR+RQ+K ETEAWE EY++L +MCE+ LA
Sbjct: 135 FLKGLSKMVDQTLKIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLA 194
Query: 198 PNLPYMKSLFLGWFEPLRDAIAADQDFCKD--KKNRVSHAPYFDLLPADMMAVITMHKLM 257
PNLPY+K +FLGWF+PL+D I +Q K+ KK R ++AP+ +LLPAD MAVI MHK+M
Sbjct: 195 PNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMM 254
Query: 258 GLLMTNSGGHSS--VRVVQAACQIGEAIEHEVRIHKFFEKTKKNSNGKNTEEETEPVAEE 317
GL+M+ GH ++VVQAA IG AIE EVRIH F ++T+KN+ G + EE
Sbjct: 255 GLVMS---GHEDGCIQVVQAAVSIGIAIEQEVRIHNFLKRTRKNNAGDSQEE-------- 314
Query: 318 QDKLAKEQDRLRKKVTKLMKKQKLRQVRMIVKEHDDIKPWGQDAHAKVGCRLIQLLTETA 377
KE+ LRK+V L++++++ +VK + KPWG+ AK+G RL++LL E A
Sbjct: 315 ----LKEKQLLRKRVNSLIRRKRIIDALKVVKS-EGTKPWGRATQAKLGSRLLELLIEAA 374
Query: 378 YIQPPIDQLGDGPPDIRPAFVHTLKTITK-EAQKTSRRYGVIECDPLVRRGLEKTARHMV 437
Y+QPP+ Q GD P+ RPAF H KT+TK K RRYGVIECD L+ GL+K+A+HM+
Sbjct: 375 YVQPPLTQSGDSIPEFRPAFRHRFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHML 434
Query: 438 IPYMPMLVPPLNWTGYDRGAHLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVYEALDTLG 497
IPY+PMLVPP W GYD+G +LFLPSY+MR HG+K+Q++A+K K V+EALDTLG
Sbjct: 435 IPYVPMLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLG 494
Query: 498 RTKWRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPSVEDEAEIRKWKWKVKAAKKE 557
TKWRVN+ +L V++R+WA GG +A LV+REDVP+PE+PS ED E++ WKW + A K
Sbjct: 495 NTKWRVNRNILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKI 554
Query: 558 NSERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF 617
N ERHS RCD+ELKL+VARKMKDEEGFYYPHNLDFRGRAYPMHP+LNHL SDLCRG LEF
Sbjct: 555 NRERHSLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEF 614
Query: 618 AEGRPLGESGLRWLKIHLANLYAGGVDKLSYKDRMSFTENHLGEIFDSADRPLEGNRWWL 677
AEGRPLG+SGL WLKIHLANLYAGGV+KLS+ R++F ENHL +I DSA+ P+ G RWWL
Sbjct: 615 AEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWL 674
Query: 678 GAEDPFQCLAVCINLSEALRSPSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNL 737
AEDPFQCLA C+ L++AL+SPSP + ISH+P+HQDGSCNGLQHYAALGRD AAAVNL
Sbjct: 675 KAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNL 734
Query: 738 VAGDKPADVYSGIASRVLDIMRSDAEKDPASNPNALHARLLINQVDRKLVKQTVMTSVYG 797
VAG+KPADVYS I+ RV +IM+ D+ KDP SNP A A++LI QVDRKLVKQTVMTSVYG
Sbjct: 735 VAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYG 794
Query: 798 VTYVGARDQIKRRLKERASIADDSQLFAASCYAAKTTLTALGEMFEAARSIMSWLGECAK 857
VTYVGAR+QIKRRL+E+ I D+ LFAA+CY+AK TL ALGE+FEAAR+IMSWLG+CAK
Sbjct: 795 VTYVGAREQIKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAK 854
Query: 858 VITSENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNF 917
+I S+N PVRW TPLGLPVVQPY + RHLI+TSLQVL LQRE + V V++QRTAFPPNF
Sbjct: 855 IIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNF 914
Query: 918 VHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENL 977
VHSLDG+HMMMTAVAC+ AGLNFAGVHDSYWTHACDVD MNRILREKFVELY PILE+L
Sbjct: 915 VHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDL 974
Query: 978 LENFQKSFPALEFPRLPDRGDFDLKDVLQSSYFFN 990
L++FQ+S+P L FP +P RGDFDLK+VL+S YFFN
Sbjct: 975 LQSFQESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 993
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022967967.1 | 0.0e+00 | 91.62 | DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita maxima] | [more] |
XP_022149021.1 | 0.0e+00 | 91.31 | DNA-directed RNA polymerase 1B, mitochondrial [Momordica charantia] | [more] |
KAG6574025.1 | 0.0e+00 | 90.93 | DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita a... | [more] |
XP_022944910.1 | 0.0e+00 | 90.93 | DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita moschata] | [more] |
XP_023542836.1 | 0.0e+00 | 90.63 | DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita pepo subsp. pepo] ... | [more] |
Match Name | E-value | Identity | Description | |
Q8L6J5 | 0.0e+00 | 73.87 | DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RP... | [more] |
Q93Y94 | 0.0e+00 | 73.52 | DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=... | [more] |
Q8VWF8 | 0.0e+00 | 69.84 | DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestr... | [more] |
Q8L6J3 | 0.0e+00 | 69.67 | DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum... | [more] |
P92969 | 0.0e+00 | 67.23 | DNA-directed RNA polymerase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HS83 | 0.0e+00 | 91.62 | DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111467347 PE=3 SV=... | [more] |
A0A6J1D747 | 0.0e+00 | 91.31 | DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111017540 PE=3 ... | [more] |
A0A6J1FZD9 | 0.0e+00 | 90.93 | DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111449300 PE=3 S... | [more] |
A0A6J1FZC4 | 0.0e+00 | 90.81 | DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111449299 PE=3 S... | [more] |
A0A1S3BF59 | 0.0e+00 | 79.92 | DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489205 PE=3 SV=1 | [more] |