Spg026178 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg026178
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ubiquitin-conjugating enzyme
Location	scaffold7: 2247645 .. 2250163 (+)
RNA-Seq Expression	Spg026178
Synteny	Spg026178

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACTCCTGCGAGGAAAAGACTGATGAGAGACTTCAAGAGGTTGCAACAAGATCCACCTGCCGGCATCAGTGGTGCTCCCCAAGACAATAATATCATGCTATGGAACGCTGTTATATTTGGGTAAGCTGGGAAAATAAATTATGAACTTGATCTTTTTTCTTATCAGAATTTTTATACATATCCACGATTGCTTCTATCACTGACTTATGCTATGGTCGTTGACATGTTTTTCTGTTGGCTTTTGCAGGCCAGATGATACACCTTGGGATGGAGGTATTCTCAATTTTTGCCTTTTTGGGCCTAAGTGACTTCTTAAGAAGACAACAACTTTGTATTAGAGTCAAGATTTCAAATGATTTGCTTATTTCTTGTTTGATGATTTCACTTTGTTTATCAGTCCAAAATTATAACTAATGGTGATCAAATCATTATTACTGCAATAAAAATAACAATCTGTTCACTTCTCTCAGTTATGTAGATATATGAAGCTATTAGCTTAGAACAGTTAAATTAATTTTTCAATCTTAAAATTATCTGATTTTGATTTGCTATTGCTAATTTCGATATAGGATGTGTGTTATATTTTCTGGTGGAAAACTCAAGAATAGTTAGAACTTTCTAAAATTCTGATTATGGTTTCCTGGGACAAAATGTCAAGTTGCTTTCATCTCTCCTGGTGCAAGTTATGGGAATGTATTCTTGAGGATCCATGTATTCTGATTTTCTTTTCTAAACATTGAAATGGATATTAGCAATAGCAACTTGTTTAATTTTCTGAGTATTTCTATCAATTTTGTTTCCAATTTTGGTAGTTTCCTTAAGTAATTTTTATTTATGAACTTCTCATGTAGTTTATGAATTATAATTTGGCTACTCTTTTTTTGAGTTTATCAGGTACGTTTAAGCTGACCCTTCAGTTCACCGAGGATTATCCAAATAAGCCACCGACAGTTCGCTTTGTGTCTAGAATGTTCCACCCTAATAGTAAGTTCACAATCTCAAGGAACATGCCTTATAAACGTTTATGCTTTATGTGATTCGTTCTGGGTCAATTTGAGAGGGCTTTTTGTAATCTCCATTGGCACTAGGTTTAAGAAGATGCCAAGTTCTCCTCTAGGTTTTATGTACAGCTACTTTTTGTGAACACAGTGTTTCTTGTTATGTTTTTATATTTTGCTTAGCTAATTTTATTGTGTATTTTTCATATTGTACTTAGCTTATTTTCTTTTGCTAACAAATGAAAAAAGTCATCTTTTAACACTATTGTGTCTGCTTTCATTAAACCTTTATGTGAACCTGACGTGCTATGTTTGATATGTATGGTATGTTTGGCTTGGGCCTGGGTGATTTTAATGGGTGAAAGGCAAGAGAGAGAGAGAGAGTATAACTATCTTGTAAAACAACGAAGTAAATGTTTATCTTAGGTTACAATATGAGTTGTGAGTATTTTGTTTTTAATTTTTTCTGTACATGTTGCTAAGCCTGCACTCTTTTTTTTTTTTTTTTTTTTTTTTTTGCTCATGTGCCTTTTCCCATCGCCTTCAGTTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATTCAGGTACCGCATAATCAATTTTGCCTAAATATATTCCAAGGCTGAAAATTTTTGATCGCTGTATGATTAATTGCTCCTTTTATCATTTTATGGGTACAAATGAAAAGCATGTAACCACAGTCATTAAAAGAAACATGCCACTGCTCCTGTACTTGCCCTATCCTAGAAGTAGAACGCATATGGTTCATGTGTTCTCAGGATGCCTATGGTAACATATTTATGGAACTGGCTGTGTGAACAAGCCGTTAGTTGTAAACATGTCCTTGCCACTGATCCATACATATAAGCCCCCATTCGTTTAGTTCTTGTTCTTGATCTCTGAATTTGTGGCATATGACAGTTTTGATTTATTGATTATTATCTTTTTGATATTTAGGATCAAGTTTAAAGAACTGAAATTATTTTGCCTGATGTTCTGATTGGAATTTGACCTACTTTTGTAGCCATTGTCGTCAATCTATATATATTTTTGTGATAATCATATATACCAATAATGTTGAACCCCACAAGTATATTACTGCCCACCTAGAAAAGGAAAAAAATGAAGGAAGGTATGGAGAGAATGAATTATCTGCCGATTTATTTGGTGCATGATGGAGAATGTGGTATATTGACAGTATTGGACAAATGACTTGTGGAATTCAAAATGTTAAATGGCTTGCTCATGCTTTTCATTGATTTGCAAACTCACTTCTCTGTTTCATCCTTTTTTTTTGGGGGTTTTTTTTAATCCCATTAATGTTTTCCCTTGTAGTCGTTGCTGTGCGACCCAAATCCAAACTCTCCTGCTAATTCTGAAGCTGCTAGAATGTTTAGCGAGAACAAGCGTGAGTACAACAGGAGAGTACGTGAAATTGTGGAACAGAGCTGGACTGCTGATTAG

mRNA sequence

ATGTCTACTCCTGCGAGGAAAAGACTGATGAGAGACTTCAAGAGGTTGCAACAAGATCCACCTGCCGGCATCAGTGGTGCTCCCCAAGACAATAATATCATGCTATGGAACGCTGTTATATTTGGGCCAGATGATACACCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTCACCGAGGATTATCCAAATAAGCCACCGACAGTTCGCTTTGTGTCTAGAATGTTCCACCCTAATATTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATTCAGTCGTTGCTGTGCGACCCAAATCCAAACTCTCCTGCTAATTCTGAAGCTGCTAGAATGTTTAGCGAGAACAAGCGTGAGTACAACAGGAGAGTACGTGAAATTGTGGAACAGAGCTGGACTGCTGATTAG

Coding sequence (CDS)

ATGTCTACTCCTGCGAGGAAAAGACTGATGAGAGACTTCAAGAGGTTGCAACAAGATCCACCTGCCGGCATCAGTGGTGCTCCCCAAGACAATAATATCATGCTATGGAACGCTGTTATATTTGGGCCAGATGATACACCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTCACCGAGGATTATCCAAATAAGCCACCGACAGTTCGCTTTGTGTCTAGAATGTTCCACCCTAATATTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATTCAGTCGTTGCTGTGCGACCCAAATCCAAACTCTCCTGCTAATTCTGAAGCTGCTAGAATGTTTAGCGAGAACAAGCGTGAGTACAACAGGAGAGTACGTGAAATTGTGGAACAGAGCTGGACTGCTGATTAG

Protein sequence

MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD

Homology

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BLAST of Spg026178 vs. NCBI nr
Match: KAF3966055.1 (hypothetical protein CMV_009812 [Castanea mollissima])

HSP 1 Score: 320.1 bits (819), Expect = 1.0e-83
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 38  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 97

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 98  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 157

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 158 PANSEAARMFSENKREYNRRVREIVEQSWTAD 189

[Close]

BLAST of Spg026178 vs. NCBI nr
Match: KAA0034394.1 (ubiquitin-conjugating enzyme [Cucumis melo var. makuwa] >TYK15527.1 ubiquitin-conjugating enzyme [Cucumis melo var. makuwa])

HSP 1 Score: 320.1 bits (819), Expect = 1.0e-83
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 5   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 64

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 65  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 124

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 125 PANSEAARMFSENKREYNRRVREIVEQSWTAD 156

[Close]

BLAST of Spg026178 vs. NCBI nr
Match: XP_016736213.1 (ubiquitin-conjugating enzyme E2 2 [Gossypium hirsutum])

HSP 1 Score: 320.1 bits (819), Expect = 1.0e-83
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 27  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 86

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 87  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 146

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 147 PANSEAARMFSENKREYNRRVREIVEQSWTAD 178

[Close]

BLAST of Spg026178 vs. NCBI nr
Match: CAB4280943.1 (unnamed protein product [Prunus armeniaca] >CAB4311352.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 320.1 bits (819), Expect = 1.0e-83
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 16  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 75

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 76  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 135

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 136 PANSEAARMFSENKREYNRRVREIVEQSWTAD 167

[Close]

BLAST of Spg026178 vs. NCBI nr
Match: RDX92411.1 (Ubiquitin-conjugating enzyme E2 2 [Mucuna pruriens])

HSP 1 Score: 320.1 bits (819), Expect = 1.0e-83
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 15  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 74

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 75  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 134

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 135 PANSEAARMFSENKREYNRRVREIVEQSWTAD 166

[Close]

BLAST of Spg026178 vs. ExPASy Swiss-Prot
Match: P42745 (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 5.7e-85
Identity = 148/152 (97.37%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSE+KREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of Spg026178 vs. ExPASy Swiss-Prot
Match: P35130 (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa OX=3879 GN=UBC2 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 5.7e-85
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of Spg026178 vs. ExPASy Swiss-Prot
Match: P25866 (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-84
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAP DNNI LWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARM+SENKREYNR+VRE+VEQSWTAD
Sbjct: 121 PANSEAARMYSENKREYNRKVREVVEQSWTAD 152

[Close]

BLAST of Spg026178 vs. ExPASy Swiss-Prot
Match: P25865 (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 2.8e-84
Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of Spg026178 vs. ExPASy Swiss-Prot
Match: P42746 (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana OX=3702 GN=UBC3 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-75
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           M+TPA+KRLM DFKRLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL FT
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSW 150
           PAN+EAAR+FSENKREYNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149

[Close]

BLAST of Spg026178 vs. ExPASy TrEMBL
Match: A0A1U8NEE1 (ubiquitin-conjugating enzyme E2 2 OS=Gossypium hirsutum OX=3635 GN=LOC107946416 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.0e-84
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Spg026178 vs. ExPASy TrEMBL
Match: A0A251PAM8 (UBC core domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_5G187900 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.0e-84
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Spg026178 vs. ExPASy TrEMBL
Match: A0A5D2AA85 (UBC core domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_A11G267400v1 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.0e-84
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Spg026178 vs. ExPASy TrEMBL
Match: A0A6I9SPK9 (ubiquitin-conjugating enzyme E2 2 OS=Sesamum indicum OX=4182 GN=LOC105157023 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.0e-84
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Spg026178 vs. ExPASy TrEMBL
Match: A0A6P4CZP7 (ubiquitin-conjugating enzyme E2 2 OS=Arachis duranensis OX=130453 GN=LOC107481243 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.0e-84
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Spg026178 vs. TAIR 10
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2 )

HSP 1 Score: 314.7 bits (805), Expect = 4.1e-86
Identity = 148/152 (97.37%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSE+KREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of Spg026178 vs. TAIR 10
Match: AT1G14400.1 (ubiquitin carrier protein 1 )

HSP 1 Score: 312.4 bits (799), Expect = 2.0e-85
Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of Spg026178 vs. TAIR 10
Match: AT1G14400.2 (ubiquitin carrier protein 1 )

HSP 1 Score: 312.4 bits (799), Expect = 2.0e-85
Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of Spg026178 vs. TAIR 10
Match: AT5G62540.1 (ubiquitin-conjugating enzyme 3 )

HSP 1 Score: 283.9 bits (725), Expect = 7.7e-77
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           M+TPA+KRLM DFKRLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL FT
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSW 150
           PAN+EAAR+FSENKREYNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149

[Close]

BLAST of Spg026178 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 145.6 bits (366), Expect = 3.3e-35
Identity = 67/146 (45.89%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 5   ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
           A KR++++ K LQ+DPP   S  P   ++  W A I GP D+P+ GG F +T+ F  DYP
Sbjct: 2   ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61

Query: 65  NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
            KPP V F +++FHPNI ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   
Sbjct: 62  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 125 EAARMFSENKREYNRRVREIVEQSWT 151
           E A M+  +K +Y     E   ++WT
Sbjct: 122 EIAHMYKTDKNKY-----ESTARTWT 142

The following BLAST results are available for this feature:

BLAST of Spg026178 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3966055.1	1.0e-83	100.00	hypothetical protein CMV_009812 [Castanea mollissima]	[more]
KAA0034394.1	1.0e-83	100.00	ubiquitin-conjugating enzyme [Cucumis melo var. makuwa] >TYK15527.1 ubiquitin-co...	[more]
XP_016736213.1	1.0e-83	100.00	ubiquitin-conjugating enzyme E2 2 [Gossypium hirsutum]	[more]
CAB4280943.1	1.0e-83	100.00	unnamed protein product [Prunus armeniaca] >CAB4311352.1 unnamed protein product...	[more]
RDX92411.1	1.0e-83	100.00	Ubiquitin-conjugating enzyme E2 2 [Mucuna pruriens]	[more]

BLAST of Spg026178 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42745	5.7e-85	97.37	Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 S...	[more]
P35130	5.7e-85	97.37	Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa OX=3879 GN=UBC2 PE=2 SV=1	[more]
P25866	1.7e-84	96.71	Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1	[more]
P25865	2.8e-84	96.05	Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 S...	[more]
P42746	1.1e-75	88.59	Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana OX=3702 GN=UBC3 PE=2 S...	[more]

BLAST of Spg026178 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1U8NEE1	5.0e-84	100.00	ubiquitin-conjugating enzyme E2 2 OS=Gossypium hirsutum OX=3635 GN=LOC107946416 ...	[more]
A0A251PAM8	5.0e-84	100.00	UBC core domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_5G187900 P...	[more]
A0A5D2AA85	5.0e-84	100.00	UBC core domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_A11G2...	[more]
A0A6I9SPK9	5.0e-84	100.00	ubiquitin-conjugating enzyme E2 2 OS=Sesamum indicum OX=4182 GN=LOC105157023 PE=...	[more]
A0A6P4CZP7	5.0e-84	100.00	ubiquitin-conjugating enzyme E2 2 OS=Arachis duranensis OX=130453 GN=LOC10748124...	[more]

BLAST of Spg026178 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02760.1	4.1e-86	97.37	ubiquiting-conjugating enzyme 2	[more]
AT1G14400.1	2.0e-85	96.05	ubiquitin carrier protein 1	[more]
AT1G14400.2	2.0e-85	96.05	ubiquitin carrier protein 1	[more]
AT5G62540.1	7.7e-77	88.59	ubiquitin-conjugating enzyme 3	[more]
AT4G27960.1	3.3e-35	45.89	ubiquitin conjugating enzyme 9	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 7..150 e-value: 5.4E-69 score: 245.2
None	No IPR available	PANTHER	PTHR24067:SF319	UBIQUITIN-CONJUGATING ENZYME E2 2	coord: 1..152
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 1..152
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 8..144 e-value: 8.5E-53 score: 177.8
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 4..150 score: 60.566891
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 7..145 e-value: 5.9055E-75 score: 218.226
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..148 e-value: 6.5E-68 score: 229.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 1..150
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 77..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg026178.1	Spg026178.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0016574	histone ubiquitination
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity