Spg026044 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg026044
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein PLASTID REDOX INSENSITIVE 2-like
Location	scaffold7: 1812428 .. 1815192 (-)
RNA-Seq Expression	Spg026044
Synteny	Spg026044

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATGGGCTGAATTTGAACCATCTGCCTATAAAAGTGGACTTGGGTAATTTAGTGGGCCTGTTGGGCTTAGACCAGTTCCTGACTTGGGTAGAAGGCCCAAGAGTGGATGGGCTTTGGCCCAAGATAAAGCCACGGACCCTCTTATGGGCTTTTTTAATCTGACGCCATACGAAATTAGGGCTTAGCTTAGAGGCGGGAGATAACCCGAACTATCCAATGGCGCTCTACGGTTGCTCTTTGGTCTCGGCCATGGCCGTTTCTCCCGCCAAGATCACATGCTTTAACGGTCTTCTTCATCGAACATCTTCCTTTTTCCCTTGTCTCGTTAAGCCCTTCGTTAATTGTACGTTAACTTCTTCCTTCAGTTACAGAGCCACTCCGATCCCGGCCAAGTATGTCTACCCGGATCCGATACCGGAATTTGCAGAAGTTGTAAGTTTTCTGCGACGTAGCGCCTTTGTCTGCTCGAATTGGTTCCGGTTTTGTGTTGATTTTTACATTTGGTCATTTTTCGCAGGAAACCCAGAAATTTAAGGAACAGTTATCGAAGAAGCTAGCGAAGGATCGCGACACATTTGGGGACGACCTGGATTCGGTTGTGGAGGTTTGCTCGAAGGTAATCGTTTTATTCACTTGCGTGGCTGTTAGATTAAAATCTGTAATTTTTTTGTTGGGTAATTAGAATTTTGAATTCCCTTGTCAATTCGGTTGAAGAATACGTCTGAGTGGCTACCTGTTTTGAGAAAATGTGTGAATGAGGCGATTGGTTTGTTTACAGAGTTGGTTTAGTTCAGTCGTGCTTTTGCCTTCAAGTGTTTCCATGGCTTGAGATGTATTTCTCAACGGTTCAATAATTGAGCCCTAAAGAAACATCGGACCTGCCTATATAGCTACAGGACGATTACTATTTCCAAGACAGCTTCCATTAATTGCGCAGAAATTTTCTGAATGTTTGACCAGTGTTGCCATTATTGATATGCTTCTTGCATTTTGATTTTTCAAATCAAAACTGAATGAATATTCCAATTTGAATTCACTTGTCCGAATTTATGTGATAGTCTTAATATGAATGTACTTGCAAGTTTTGAGCAGATATTTGGTGAATATTTGCATGTGGAGTACGGAGGTCCTGGGACATTATTGGTGGAGCCTTTCACCAATATGTTTATTGCTCTCAACGAGAGAAAATTACCTGGCGCGCCTTTGGCCGCAAGAACTTCGCTCCTATGGGCTCAAAACAATCTAGATCACGATTGGAACATTTGGAACTCTAAAGGAGGGCTTAAATGATTTGCTTCTTGTAGTTACATTTGTGAAGATCCTTGTATTTGTATCTAGATTTTCTGTTCTTTTTGTAGTTGAAGATGATGGAGGAAAAAGTGTATGTATCATCACAAAGATACTCCAACACAGTGTCAATTTCATTGATATCTTTGTTGCTATACAAATGGCTTATTTCTTGCAATACATGAATCATTCTGGGGCTGTGGTCTTACACTGAATTGGAAATTTGGATGCTCATTTTCAAGCTCTCTCTGAATCTTCTAACTTTCCACAATTGAGAAGTTTCTCTGCCATTGCAACGAGCATCTTAAATCAAACTTCACTATTCTGCCGTATGAACACTCTTGCTTGTTGTGATAAAAAAAAAAAGGTTTGAAACATAAATCAGCTGGCAGCTTCAGAGATGCTCTGCAATGATGGTCTCCAAGCCTTTGACCTTGCCGCAGTGGCGTTTGCTGCAGGTGTTCTGATTCGATGTCTTTCATGTTTGACTGCCTGCAATGTTTTTTTCAGAGAGATTATTGGTATGATTTTATCTTGAAAAATTACTTCAAGTTGGAAATGACCCCAATCACAATCATATTTGACTTTTTTCATTTTCTCTTGCAGTTATCGATTATGATTCAAAAGGAAACGAATTGAGTTACCTGCTGGTTCTTTTCAGACTCTTCTACTTTACCGCCGGCAGCCCTCTTATCTGGCGCCGTCTGTGGCTTCTCCTCCGATTCCAGCAGTGGCTTCTTAGATTTTGCATACTTTTTAGCCCGCAACACCTTCATAACCTCTGCAAGTTCCAAAAAAACGTCAAAGGGCTGAACTTACTAAACAGAAGGAAGTGAAAGAACTTCCAAAAAATCGAATTGGCACCATACCCTGAGTGGTGACAAGCCGATAGGCATGGCCAAGAGCAAGAGTGTCGTTTGGCCGGAGAAGCTTGACACGAGTAAAACGCACCGTTTTGGGCTCCCGATTGTCTTCCTCAGATTGAGGCAAGGGAATTATAAGAGAAACATAGTGACCAGGATTGGTCCTCATGACTTCACTGGCCACCACCGGCCAATACAGCCTCTCAATCCGGCCACTTGGGTGCTGTATAACCAGCGCCGCCGCATCAACCGCCTGGCAATTCCCCATCTGAATTCTGCAACTGGTAGATTGAAAGAAGAAGAGGAAGAAGAAGAAGAAGATGATGAAGATGATAGATAAGAAGAGGGAGAGTGAAGGAAAGAGGTCTCTTTCTATACAGCTTCTTTGTTCGCCAAATGGGTCTACTTAGAAGTGCAGGCCGTCCATTCATATATCTCACACTTCCCAACTAACTTAATGCAACGTGGGTCAAATTTATATCGAAAATTGACAATGTAACGTACGGAGATTAGAGTATTCAAGTTTTCTAATTTTTTTACTTTTTAATATGTTGGATTGATATTTATTTAAACTTAGCGTTTGTGGGTTTATTATTTTTAATTAAACGACAAG

mRNA sequence

ATGGCGCTCTACGGTTGCTCTTTGGTCTCGGCCATGGCCGTTTCTCCCGCCAAGATCACATGCTTTAACGGTCTTCTTCATCGAACATCTTCCTTTTTCCCTTGTCTCGTTAAGCCCTTCGTTAATTGTACGTTAACTTCTTCCTTCAGTTACAGAGCCACTCCGATCCCGGCCAAGTATGTCTACCCGGATCCGATACCGGAATTTGCAGAAGTTGAAACCCAGAAATTTAAGGAACAGTTATCGAAGAAGCTAGCGAAGGATCGCGACACATTTGGGGACGACCTGGATTCGGTTGTGGAGGTTTGCTCGAAGATATTTGGTGAATATTTGCATGTGGAGTACGGAGGTCCTGGGACATTATTGGTGGAGCCTTTCACCAATATGTTTATTGCTCTCAACGAGAGAAAATTACCTGGCGCGCCTTTGGCCGCAAGAACTTCGCTCCTATGGGCTCAAAACAATCTAGATCACGATTGGAACATTTGGAACTCTAAAGGAGGGCTTAAATGA

Coding sequence (CDS)

ATGGCGCTCTACGGTTGCTCTTTGGTCTCGGCCATGGCCGTTTCTCCCGCCAAGATCACATGCTTTAACGGTCTTCTTCATCGAACATCTTCCTTTTTCCCTTGTCTCGTTAAGCCCTTCGTTAATTGTACGTTAACTTCTTCCTTCAGTTACAGAGCCACTCCGATCCCGGCCAAGTATGTCTACCCGGATCCGATACCGGAATTTGCAGAAGTTGAAACCCAGAAATTTAAGGAACAGTTATCGAAGAAGCTAGCGAAGGATCGCGACACATTTGGGGACGACCTGGATTCGGTTGTGGAGGTTTGCTCGAAGATATTTGGTGAATATTTGCATGTGGAGTACGGAGGTCCTGGGACATTATTGGTGGAGCCTTTCACCAATATGTTTATTGCTCTCAACGAGAGAAAATTACCTGGCGCGCCTTTGGCCGCAAGAACTTCGCTCCTATGGGCTCAAAACAATCTAGATCACGATTGGAACATTTGGAACTCTAAAGGAGGGCTTAAATGA

Protein sequence

MALYGCSLVSAMAVSPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPIPAKYVYPDPIPEFAEVETQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSKGGLK

Homology

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BLAST of Spg026044 vs. NCBI nr
Match: XP_008446243.1 (PREDICTED: uncharacterized protein LOC103489034 isoform X1 [Cucumis melo] >KAA0034339.1 uncharacterized protein E6C27_scaffold65G003420 [Cucumis melo var. makuwa] >TYK15580.1 uncharacterized protein E5676_scaffold35G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 297.4 bits (760), Expect = 8.1e-77
Identity = 144/170 (84.71%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 1   MALYGCSLVSAMAVSPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPIPAKY 60
           MA YGC+LVSA+ VSPAKIT FNGL + T S FP  VKP VNCTLTSS  YRATPI A Y
Sbjct: 1   MAPYGCALVSAIEVSPAKITSFNGLHYPTFSLFPSFVKPLVNCTLTSSVIYRATPITASY 60

Query: 61  VYPDPIPEFAEVETQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPGT 120
           VYP+PIPEFAEVETQKFKEQLSKKLAKDR+TFG+D DSVV+VCSKIFGEYLHVEYGGPGT
Sbjct: 61  VYPEPIPEFAEVETQKFKEQLSKKLAKDRETFGNDFDSVVDVCSKIFGEYLHVEYGGPGT 120

Query: 121 LLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSKGGLK 171
           L+VEPFTNMFIALNERKLPGAPLAARTSLLWAQN LD+DWNIWNSKGG K
Sbjct: 121 LIVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDNDWNIWNSKGGFK 170

[Close]

BLAST of Spg026044 vs. NCBI nr
Match: XP_038891536.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 297.0 bits (759), Expect = 1.1e-76
Identity = 146/170 (85.88%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 1   MALYGCSLVSAMAVSPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPIPAKY 60
           MA YGC+LV A+AVSPAKIT FNGL +   S FP  VKPFVN TLTSSF YRATPIPA Y
Sbjct: 1   MAPYGCALVLAIAVSPAKITSFNGLHYPIFSTFPSFVKPFVNYTLTSSFIYRATPIPASY 60

Query: 61  VYPDPIPEFAEVETQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPGT 120
           VYP+PIPEFAEVETQKFKEQLSKKLAKDR+TFG+DLDSVV+VCSKIFGEYLHVEYGGPGT
Sbjct: 61  VYPEPIPEFAEVETQKFKEQLSKKLAKDRETFGNDLDSVVDVCSKIFGEYLHVEYGGPGT 120

Query: 121 LLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSKGGLK 171
           LLVEPFTNMFIALNERKLPGA LAARTSLLWAQN+LDHDWNIWN KG LK
Sbjct: 121 LLVEPFTNMFIALNERKLPGAALAARTSLLWAQNHLDHDWNIWNFKGRLK 170

[Close]

BLAST of Spg026044 vs. NCBI nr
Match: XP_022151033.1 (protein PLASTID REDOX INSENSITIVE 2-like [Momordica charantia])

HSP 1 Score: 289.3 bits (739), Expect = 2.2e-74
Identity = 140/167 (83.83%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   MALYGCSLVSAMAVSPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPIPAKY 60
           MAL+GC+L+ A AV PAKITCFNGLLH T S FP LVKPFVNCT TSSFSYRATP+P K+
Sbjct: 61  MALHGCALLLASAVPPAKITCFNGLLHPTFSPFPSLVKPFVNCTSTSSFSYRATPLPPKF 120

Query: 61  VYPDPIPEFAEVETQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPGT 120
           VYPDPIPEFAE ET+KF+E LSKKLA+DR TFG+DLD VVEVCSKIFGEYLHVEYGGP T
Sbjct: 121 VYPDPIPEFAEAETRKFREYLSKKLAEDRATFGNDLDFVVEVCSKIFGEYLHVEYGGPET 180

Query: 121 LLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSKG 168
           LLVEPFTNMFIALNERKLPGA LAARTSLLWAQN+LD DW IWNSKG
Sbjct: 181 LLVEPFTNMFIALNERKLPGASLAARTSLLWAQNHLDQDWTIWNSKG 227

[Close]

BLAST of Spg026044 vs. NCBI nr
Match: XP_004135230.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic isoform X1 [Cucumis sativus] >KAE8648725.1 hypothetical protein Csa_009011 [Cucumis sativus])

HSP 1 Score: 286.2 bits (731), Expect = 1.9e-73
Identity = 140/170 (82.35%), Postives = 150/170 (88.24%), Query Frame = 0


Query: 1   MALYGCSLVSAMAVSPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPIPAKY 60
           MA YG +LVSA+ VSPAKI  FNGL + T   FP  VKP VNCTLTSS  YRATPI A Y
Sbjct: 1   MARYGGALVSAVEVSPAKIAGFNGLHYPTFFLFPSFVKPLVNCTLTSSVIYRATPITASY 60

Query: 61  VYPDPIPEFAEVETQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPGT 120
           VYP+PIPEFAEVETQKFKEQLSKKLAKDR+TFG+D DSVV+VCSKIFGEYLHVEYGGPGT
Sbjct: 61  VYPEPIPEFAEVETQKFKEQLSKKLAKDRETFGNDFDSVVDVCSKIFGEYLHVEYGGPGT 120

Query: 121 LLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSKGGLK 171
           L+VEPFTNMFIALNERKL GAPLAARTSLLWAQN+LD+DWNIWNSKGG K
Sbjct: 121 LIVEPFTNMFIALNERKLSGAPLAARTSLLWAQNHLDNDWNIWNSKGGFK 170

[Close]

BLAST of Spg026044 vs. NCBI nr
Match: KAG6601371.1 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032155.1 Protein PLASTID REDOX INSENSITIVE 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.0 bits (728), Expect = 4.2e-73
Identity = 144/172 (83.72%), Postives = 149/172 (86.63%), Query Frame = 0


Query: 1   MALYGCSLVSAMAVSPAKITCFNGLLHRT--SSFFPCLVKPFVNCTLTSSFSYRATPIPA 60
           MA Y C LVSA+AVSPAK TCFNGL + T   S    LV PFVNCTLTSS  YRATP PA
Sbjct: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPA 60

Query: 61  KYVYPDPIPEFAEVETQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGP 120
             VYPDPIPEFAEVET+KFKEQLSKKLAKDR+TFG+DLDSVVEVCSKIF EYLHVEYGGP
Sbjct: 61  TCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP 120

Query: 121 GTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSKGGLK 171
           GTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQN LDHDWNIW SK GLK
Sbjct: 121 GTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 172

[Close]

BLAST of Spg026044 vs. ExPASy Swiss-Prot
Match: Q9XIK0 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PRIN2 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.1e-31
Identity = 71/150 (47.33%), Postives = 96/150 (64.00%), Query Frame = 0


Query: 15  SPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPI-PAKYVYPDPIPEFAEVE 74
           SPA ++C      +++ FF    +  V     SS S R      A+Y +PDPIPEFAE E
Sbjct: 31  SPAAVSC----AIKSTQFFKQRCRTKVRDFSLSSLSRRGFVCRAAEYKFPDPIPEFAEAE 90

Query: 75  TQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPGTLLVEPFTNMFIAL 134
           T+KF++ +  KL+K RD F D +D +V VC++IF  +L  EYGGPGTLLV PF +M   L
Sbjct: 91  TEKFRDHMLNKLSK-RDLFEDSVDEIVGVCTEIFETFLRSEYGGPGTLLVIPFIDMADTL 150

Query: 135 NERKLPGAPLAARTSLLWAQNNLDHDWNIW 164
           NER+LPG P AAR ++ WAQ+++D DW  W
Sbjct: 151 NERELPGGPQAARAAIKWAQDHVDKDWKEW 175

[Close]

BLAST of Spg026044 vs. ExPASy Swiss-Prot
Match: B6UFC7 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Zea mays OX=4577 GN=PRIN2 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-28
Identity = 74/167 (44.31%), Postives = 99/167 (59.28%), Query Frame = 0


Query: 1   MALYGCSLVSAMAVSPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPIPAKY 60
           + L  CS     +VSPA+ +   GL  R  S  PCL K FV C    +  Y        Y
Sbjct: 18  LPLRSCS--PTKSVSPAQRSASMGL--RLRSGRPCLGK-FV-CRRAKNAGYE------DY 77

Query: 61  VYPDPIPEFAEVETQKFKEQLSKKL-AKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPG 120
            +PDPIPEFAE ET KF+E ++ +L  K  D FGD ++ +V+VC++I G +L  +Y GPG
Sbjct: 78  KFPDPIPEFAEQETSKFREHMAWRLEQKKEDYFGDHVEEIVDVCTEIMGTFLENDYRGPG 137

Query: 121 TLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSK 167
           TLLV PF +M   + ER LPGAP AAR ++ WA+ N+D DW  W  +
Sbjct: 138 TLLVHPFLDMKGEIKERGLPGAPQAARAAIAWAEKNVDKDWKAWTGE 172

[Close]

BLAST of Spg026044 vs. ExPASy Swiss-Prot
Match: Q6H612 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PRIN2 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.0e-26
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 60  YVYPDPIPEFAEVETQKFKEQLSKKLAKDRDT-FGDDLDSVVEVCSKIFGEYLHVEYGGP 119
           Y +PDPIPEFA  ET KFKE +  +L + +D  FG+ ++ +V+VC++I G +L  +Y GP
Sbjct: 64  YKFPDPIPEFAAQETSKFKEHMMWRLEQKKDDYFGEHVEEIVDVCTEILGTFLEHDYCGP 123

Query: 120 GTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSK 167
           GTLLV PF +M   + ER LPGAP AAR ++ WA+ N+D DW  W  +
Sbjct: 124 GTLLVHPFLDMKGEIKERGLPGAPQAARAAIAWAEKNIDKDWKAWTGE 171

[Close]

BLAST of Spg026044 vs. ExPASy TrEMBL
Match: A0A5A7SZ04 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00740 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.9e-77
Identity = 144/170 (84.71%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 1   MALYGCSLVSAMAVSPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPIPAKY 60
           MA YGC+LVSA+ VSPAKIT FNGL + T S FP  VKP VNCTLTSS  YRATPI A Y
Sbjct: 1   MAPYGCALVSAIEVSPAKITSFNGLHYPTFSLFPSFVKPLVNCTLTSSVIYRATPITASY 60

Query: 61  VYPDPIPEFAEVETQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPGT 120
           VYP+PIPEFAEVETQKFKEQLSKKLAKDR+TFG+D DSVV+VCSKIFGEYLHVEYGGPGT
Sbjct: 61  VYPEPIPEFAEVETQKFKEQLSKKLAKDRETFGNDFDSVVDVCSKIFGEYLHVEYGGPGT 120

Query: 121 LLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSKGGLK 171
           L+VEPFTNMFIALNERKLPGAPLAARTSLLWAQN LD+DWNIWNSKGG K
Sbjct: 121 LIVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDNDWNIWNSKGGFK 170

[Close]

BLAST of Spg026044 vs. ExPASy TrEMBL
Match: A0A1S3BEK8 (uncharacterized protein LOC103489034 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489034 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.9e-77
Identity = 144/170 (84.71%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 1   MALYGCSLVSAMAVSPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPIPAKY 60
           MA YGC+LVSA+ VSPAKIT FNGL + T S FP  VKP VNCTLTSS  YRATPI A Y
Sbjct: 1   MAPYGCALVSAIEVSPAKITSFNGLHYPTFSLFPSFVKPLVNCTLTSSVIYRATPITASY 60

Query: 61  VYPDPIPEFAEVETQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPGT 120
           VYP+PIPEFAEVETQKFKEQLSKKLAKDR+TFG+D DSVV+VCSKIFGEYLHVEYGGPGT
Sbjct: 61  VYPEPIPEFAEVETQKFKEQLSKKLAKDRETFGNDFDSVVDVCSKIFGEYLHVEYGGPGT 120

Query: 121 LLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSKGGLK 171
           L+VEPFTNMFIALNERKLPGAPLAARTSLLWAQN LD+DWNIWNSKGG K
Sbjct: 121 LIVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDNDWNIWNSKGGFK 170

[Close]

BLAST of Spg026044 vs. ExPASy TrEMBL
Match: A0A6J1DB25 (protein PLASTID REDOX INSENSITIVE 2-like OS=Momordica charantia OX=3673 GN=LOC111019054 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 140/167 (83.83%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   MALYGCSLVSAMAVSPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPIPAKY 60
           MAL+GC+L+ A AV PAKITCFNGLLH T S FP LVKPFVNCT TSSFSYRATP+P K+
Sbjct: 61  MALHGCALLLASAVPPAKITCFNGLLHPTFSPFPSLVKPFVNCTSTSSFSYRATPLPPKF 120

Query: 61  VYPDPIPEFAEVETQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPGT 120
           VYPDPIPEFAE ET+KF+E LSKKLA+DR TFG+DLD VVEVCSKIFGEYLHVEYGGP T
Sbjct: 121 VYPDPIPEFAEAETRKFREYLSKKLAEDRATFGNDLDFVVEVCSKIFGEYLHVEYGGPET 180

Query: 121 LLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSKG 168
           LLVEPFTNMFIALNERKLPGA LAARTSLLWAQN+LD DW IWNSKG
Sbjct: 181 LLVEPFTNMFIALNERKLPGASLAARTSLLWAQNHLDQDWTIWNSKG 227

[Close]

BLAST of Spg026044 vs. ExPASy TrEMBL
Match: A0A6J1GYK9 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458359 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.0e-72
Identity = 146/175 (83.43%), Postives = 151/175 (86.29%), Query Frame = 0


Query: 1   MALYGCSLVSAMAVSPAKITCFNGLLHRTSSFFP---CLVKPFVNCTLTSSFSYRATPIP 60
           MA Y C LVSA+AVSPAK TCFNGL + T  FFP    LV PFVNCTLTSS  YRATP P
Sbjct: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPT--FFPSSSSLVNPFVNCTLTSSIIYRATPAP 60

Query: 61  --AKYVYPDPIPEFAEVETQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEY 120
             A  VYPDPIPEFAEVET+KFKEQLSKKLAKDR+TFG+DLDSVVEVCSKIF EYLHVEY
Sbjct: 61  ATATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEY 120

Query: 121 GGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSKGGLK 171
           GGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQN LDHDWNIW SK GLK
Sbjct: 121 GGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 173

[Close]

BLAST of Spg026044 vs. ExPASy TrEMBL
Match: A0A6J1JDH3 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485796 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.0e-72
Identity = 141/170 (82.94%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MALYGCSLVSAMAVSPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPIPAKY 60
           MA Y C LVSA+AVSPAK TCFNGL + T S    L KPFVNCTLTSS  YRATP  A  
Sbjct: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSLGKPFVNCTLTSSIIYRATPATASC 60

Query: 61  VYPDPIPEFAEVETQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPGT 120
           VY DPIPEFAEVET+KFKEQLSKKLAKDR+TFG+DLDSVVEVCSKIF EYLHVEYGGPGT
Sbjct: 61  VYHDPIPEFAEVETRKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGPGT 120

Query: 121 LLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNNLDHDWNIWNSKGGLK 171
           LLVEPFTNMFIALNERKLPGAPLA RTSLLWAQN LDHDWNIW SK GLK
Sbjct: 121 LLVEPFTNMFIALNERKLPGAPLATRTSLLWAQNYLDHDWNIWISKRGLK 170

[Close]

BLAST of Spg026044 vs. TAIR 10
Match: AT1G10522.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 134.8 bits (338), Expect = 6.5e-32
Identity = 71/150 (47.33%), Postives = 96/150 (64.00%), Query Frame = 0


Query: 15  SPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPI-PAKYVYPDPIPEFAEVE 74
           SPA ++C      +++ FF    +  V     SS S R      A+Y +PDPIPEFAE E
Sbjct: 31  SPAAVSC----AIKSTQFFKQRCRTKVRDFSLSSLSRRGFVCRAAEYKFPDPIPEFAEAE 90

Query: 75  TQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPGTLLVEPFTNMFIAL 134
           T+KF++ +  KL+K RD F D +D +V VC++IF  +L  EYGGPGTLLV PF +M   L
Sbjct: 91  TEKFRDHMLNKLSK-RDLFEDSVDEIVGVCTEIFETFLRSEYGGPGTLLVIPFIDMADTL 150

Query: 135 NERKLPGAPLAARTSLLWAQNNLDHDWNIW 164
           NER+LPG P AAR ++ WAQ+++D DW  W
Sbjct: 151 NERELPGGPQAARAAIKWAQDHVDKDWKEW 175

[Close]

BLAST of Spg026044 vs. TAIR 10
Match: AT1G10522.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 134.8 bits (338), Expect = 6.5e-32
Identity = 71/150 (47.33%), Postives = 96/150 (64.00%), Query Frame = 0


Query: 15  SPAKITCFNGLLHRTSSFFPCLVKPFVNCTLTSSFSYRATPI-PAKYVYPDPIPEFAEVE 74
           SPA ++C      +++ FF    +  V     SS S R      A+Y +PDPIPEFAE E
Sbjct: 31  SPAAVSC----AIKSTQFFKQRCRTKVRDFSLSSLSRRGFVCRAAEYKFPDPIPEFAEAE 90

Query: 75  TQKFKEQLSKKLAKDRDTFGDDLDSVVEVCSKIFGEYLHVEYGGPGTLLVEPFTNMFIAL 134
           T+KF++ +  KL+K RD F D +D +V VC++IF  +L  EYGGPGTLLV PF +M   L
Sbjct: 91  TEKFRDHMLNKLSK-RDLFEDSVDEIVGVCTEIFETFLRSEYGGPGTLLVIPFIDMADTL 150

Query: 135 NERKLPGAPLAARTSLLWAQNNLDHDWNIW 164
           NER+LPG P AAR ++ WAQ+++D DW  W
Sbjct: 151 NERELPGGPQAARAAIKWAQDHVDKDWKEW 175

The following BLAST results are available for this feature:

BLAST of Spg026044 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446243.1	8.1e-77	84.71	PREDICTED: uncharacterized protein LOC103489034 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_038891536.1	1.1e-76	85.88	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Benincasa hispida]	[more]
XP_022151033.1	2.2e-74	83.83	protein PLASTID REDOX INSENSITIVE 2-like [Momordica charantia]	[more]
XP_004135230.1	1.9e-73	82.35	protein PLASTID REDOX INSENSITIVE 2, chloroplastic isoform X1 [Cucumis sativus] ...	[more]
KAG6601371.1	4.2e-73	83.72	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrospe...	[more]

BLAST of Spg026044 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIK0	9.1e-31	47.33	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
B6UFC7	1.1e-28	44.31	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Zea mays OX=4577 GN=PRIN2 ...	[more]
Q6H612	4.0e-26	49.07	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Oryza sativa subsp. japoni...	[more]

BLAST of Spg026044 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZ04	3.9e-77	84.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BEK8	3.9e-77	84.71	uncharacterized protein LOC103489034 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1DB25	1.1e-74	83.83	protein PLASTID REDOX INSENSITIVE 2-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1GYK9	1.0e-72	83.43	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita ...	[more]
A0A6J1JDH3	5.0e-72	82.94	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita ...	[more]

BLAST of Spg026044 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10522.1	6.5e-32	47.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10522.2	6.5e-32	47.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35987:SF3	PROTEIN PLASTID REDOX INSENSITIVE 2, CHLOROPLASTIC-LIKE	coord: 1..166
IPR039349	Protein PLASTID REDOX INSENSITIVE 2	PANTHER	PTHR35987	PROTEIN PLASTID REDOX INSENSITIVE 2, CHLOROPLASTIC-RELATED	coord: 1..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg026044.1	Spg026044.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression